NO03G02760, NO03G02760 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO03G02760 vs. NCBI_GenBank
Match: EWM29714.1 (small gtp-binding protein [Nannochloropsis gaditana]) HSP 1 Score: 409.1 bits (1050), Expect = 9.100e-111 Identity = 212/224 (94.64%), Postives = 220/224 (98.21%), Query Frame = 0 Query: 1 MAATSPVMSPSSPASLPQIPSLAKYKLVFLGDQGVGKTSIITRFMYDTFEKNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDITNRASFLNTSKWVEDVRNERGNDVIIMLVGNKTDLSDRRQVSTEEGEDKAKQENIMFIETSAKAGFNIKPLFRKLATALPGMESAQSQGSANLIDIKLAATPATSSSDEAEARSRCSC 225 MAATSPV SP+SPASLPQIPSLAKYKLVFLGDQGVGKTSIITRFMYDTFEKNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDITNRASFLNTSKWV+DVRNERGNDVIIMLVGNKTDLSDRRQVSTEEGEDKAKQ+NIMFIETSAKAGFNIKPLFRKLATALPGMESAQ+QGSANLIDIKLAA PA SSS++A+ RSRC+C Sbjct: 94 MAATSPVKSPTSPASLPQIPSLAKYKLVFLGDQGVGKTSIITRFMYDTFEKNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDITNRASFLNTSKWVDDVRNERGNDVIIMLVGNKTDLSDRRQVSTEEGEDKAKQDNIMFIETSAKAGFNIKPLFRKLATALPGMESAQTQGSANLIDIKLAAAPA-SSSEQADTRSRCAC 316
BLAST of NO03G02760 vs. NCBI_GenBank
Match: CBJ25951.1 (Rab6, RAB family GTPase [Ectocarpus siliculosus]) HSP 1 Score: 331.6 bits (849), Expect = 1.800e-87 Identity = 170/211 (80.57%), Postives = 186/211 (88.15%), Query Frame = 0 Query: 15 SLPQIPSLAKYKLVFLGDQGVGKTSIITRFMYDTFEKNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDITNRASFLNTSKWVEDVRNERGNDVIIMLVGNKTDLSDRRQVSTEEGEDKAKQENIMFIETSAKAGFNIKPLFRKLATALPGMESA-QSQGSANLIDIKLAATPATSSSDEAEARSRCSC 225 ++PQI LAKYKLVFLGDQ VGKTSIITRFMYD F+KNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAV+VYDITNRASFLNTSKW+EDVRNERGNDV++MLVGNKTDL +RRQVS EEGED+AK E IMFIETSAK G+NIK LFRKLATALPGME+A + +ANLIDIKL+A P T +A C+C Sbjct: 12 AVPQIAPLAKYKLVFLGDQSVGKTSIITRFMYDNFDKNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDITNRASFLNTSKWIEDVRNERGNDVVMMLVGNKTDLKERRQVSVEEGEDRAKAEGIMFIETSAKGGYNIKALFRKLATALPGMETAPATSNNANLIDIKLSAAPPTE-----DAARTCAC 217
BLAST of NO03G02760 vs. NCBI_GenBank
Match: XP_008902762.1 (hypothetical protein PPTG_09511 [Phytophthora parasitica INRA-310] >ETI51264.1 hypothetical protein F443_05331 [Phytophthora parasitica P1569] >ETK91160.1 hypothetical protein L915_05192 [Phytophthora parasitica] >ETL44560.1 hypothetical protein L916_05148 [Phytophthora parasitica] >ETM50890.1 hypothetical protein L914_05147 [Phytophthora parasitica] >ETN11830.1 hypothetical protein PPTG_09511 [Phytophthora parasitica INRA-310] >ETO80018.1 hypothetical protein F444_05377 [Phytophthora parasitica P1976] >ETP21029.1 hypothetical protein F441_05338 [Phytophthora parasitica CJ01A1] >ETP48978.1 hypothetical protein F442_05382 [Phytophthora parasitica P10297] >KUG01996.1 Ras-related protein RABH1e [Phytophthora nicotianae]) HSP 1 Score: 329.3 bits (843), Expect = 9.100e-87 Identity = 166/210 (79.05%), Postives = 182/210 (86.67%), Query Frame = 0 Query: 15 SLPQIPSLAKYKLVFLGDQGVGKTSIITRFMYDTFEKNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDITNRASFLNTSKWVEDVRNERGNDVIIMLVGNKTDLSDRRQVSTEEGEDKAKQENIMFIETSAKAGFNIKPLFRKLATALPGMESAQSQGSANLIDIKLAATPATSSSDEAEARSRCSC 225 ++PQI LAKYKLVFLGDQGVGKTS+ITRFMYDTF+ YQATIGIDFLSKTMY+EDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDITNRASFLNTSKW+EDVR ERG DV+IMLVGNKTD+SDRRQVS EEG DKAK+EN+MFIETSAKAG+NIK LFRKLAT LPGME+ G +NLIDIKL A P + +C+C Sbjct: 37 NVPQIAPLAKYKLVFLGDQGVGKTSMITRFMYDTFDNAYQATIGIDFLSKTMYMEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDITNRASFLNTSKWIEDVRTERGQDVVIMLVGNKTDISDRRQVSIEEGSDKAKEENVMFIETSAKAGYNIKALFRKLATVLPGMENTMISGDSNLIDIKLTAAPPPKEN----TAEQCNC 242
BLAST of NO03G02760 vs. NCBI_GenBank
Match: ETL97732.1 (hypothetical protein L917_05031 [Phytophthora parasitica]) HSP 1 Score: 329.3 bits (843), Expect = 9.100e-87 Identity = 166/210 (79.05%), Postives = 182/210 (86.67%), Query Frame = 0 Query: 15 SLPQIPSLAKYKLVFLGDQGVGKTSIITRFMYDTFEKNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDITNRASFLNTSKWVEDVRNERGNDVIIMLVGNKTDLSDRRQVSTEEGEDKAKQENIMFIETSAKAGFNIKPLFRKLATALPGMESAQSQGSANLIDIKLAATPATSSSDEAEARSRCSC 225 ++PQI LAKYKLVFLGDQGVGKTS+ITRFMYDTF+ YQATIGIDFLSKTMY+EDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDITNRASFLNTSKW+EDVR ERG DV+IMLVGNKTD+SDRRQVS EEG DKAK+EN+MFIETSAKAG+NIK LFRKLAT LPGME+ G +NLIDIKL A P + +C+C Sbjct: 59 NVPQIAPLAKYKLVFLGDQGVGKTSMITRFMYDTFDNAYQATIGIDFLSKTMYMEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDITNRASFLNTSKWIEDVRTERGQDVVIMLVGNKTDISDRRQVSIEEGSDKAKEENVMFIETSAKAGYNIKALFRKLATVLPGMENTMISGDSNLIDIKLTAAPPPKEN----TAEQCNC 264
BLAST of NO03G02760 vs. NCBI_GenBank
Match: XP_024582760.1 (rab family gtpase [Plasmopara halstedii] >CEG46391.1 rab family gtpase [Plasmopara halstedii]) HSP 1 Score: 329.3 bits (843), Expect = 9.100e-87 Identity = 165/215 (76.74%), Postives = 184/215 (85.58%), Query Frame = 0 Query: 10 PSSPASLPQIPSLAKYKLVFLGDQGVGKTSIITRFMYDTFEKNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDITNRASFLNTSKWVEDVRNERGNDVIIMLVGNKTDLSDRRQVSTEEGEDKAKQENIMFIETSAKAGFNIKPLFRKLATALPGMESAQSQGSANLIDIKLAATPATSSSDEAEARSRCSC 225 P + ++PQI LAKYKLVFLGDQGVGKTS+ITRFMYDTF+ YQATIGIDFLSKTMY+EDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDITNRASFLNTSKW+EDVR ERG DV++MLVGNKTD+SDRRQVS EEG DKAK+EN+M+IETSAKAG+NIK LFRKLAT LPGME+ G +NLIDIKL A P + +C+C Sbjct: 33 PDTDVNVPQIAPLAKYKLVFLGDQGVGKTSMITRFMYDTFDNAYQATIGIDFLSKTMYMEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDITNRASFLNTSKWIEDVRTERGQDVVVMLVGNKTDISDRRQVSIEEGSDKAKEENVMYIETSAKAGYNIKALFRKLATVLPGMENTMITGDSNLIDIKLTAAP----PPKEHTAEQCNC 243
BLAST of NO03G02760 vs. NCBI_GenBank
Match: CCI10520.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 326.6 bits (836), Expect = 5.900e-86 Identity = 162/203 (79.80%), Postives = 182/203 (89.66%), Query Frame = 0 Query: 7 VMSPSSPASLPQIPSLAKYKLVFLGDQGVGKTSIITRFMYDTFEKNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDITNRASFLNTSKWVEDVRNERGNDVIIMLVGNKTDLSDRRQVSTEEGEDKAKQENIMFIETSAKAGFNIKPLFRKLATALPGMESAQSQGSANLIDIKLAATPA 210 V +S ++PQI L+KYK+VFLGDQGVGKTS+ITRFMYDTF+ YQATIGIDFLSKTMY+EDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDITNRASFLNT KW+EDVR ERG DV+IMLVGNKTD+SDRRQV+TEEG +KA +EN++FIE+SAKAG+NIKPLFRKLA LPGME+A + G ANLIDIKL A PA Sbjct: 56 VTMDTSTVNVPQITPLSKYKIVFLGDQGVGKTSMITRFMYDTFDNAYQATIGIDFLSKTMYMEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDITNRASFLNTIKWIEDVRTERGQDVVIMLVGNKTDISDRRQVTTEEGTEKATEENVLFIESSAKAGYNIKPLFRKLAVMLPGMENATNNGDANLIDIKLTAAPA 258
BLAST of NO03G02760 vs. NCBI_GenBank
Match: CCA23418.1 (Rab6 family GTPase putative [Albugo laibachii Nc14]) HSP 1 Score: 325.9 bits (834), Expect = 1.000e-85 Identity = 167/218 (76.61%), Postives = 187/218 (85.78%), Query Frame = 0 Query: 7 VMSPSSPASLPQIPSLAKYKLVFLGDQGVGKTSIITRFMYDTFEKNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDITNRASFLNTSKWVEDVRNERGNDVIIMLVGNKTDLSDRRQVSTEEGEDKAKQENIMFIETSAKAGFNIKPLFRKLATALPGMESAQSQGSANLIDIKLAATPATSSSDEAEARSRCSC 225 V +S ++PQI L+KYK+VFLGDQGVGKTS+ITRFMYDTF+ YQATIGIDFLSKTMY+EDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDITNRASFLNT KW+EDVR ERG DV+IMLVGNKTD+SDRRQV+ EEG +KA QEN++FIE+SAKAG+NIKPLFRKLA LPGME+A + G ANLIDIKL A PA EA S C+C Sbjct: 35 VTMDTSTVNVPQITPLSKYKIVFLGDQGVGKTSMITRFMYDTFDNAYQATIGIDFLSKTMYMEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDITNRASFLNTIKWIEDVRTERGQDVVIMLVGNKTDISDRRQVTVEEGTEKATQENVLFIESSAKAGYNIKPLFRKLAVMLPGMENATNNGDANLIDIKLTAAPAPK---EATTNS-CAC 248
BLAST of NO03G02760 vs. NCBI_GenBank
Match: XP_009534275.1 (hypothetical protein PHYSODRAFT_254677, partial [Phytophthora sojae] >EGZ09414.1 hypothetical protein PHYSODRAFT_254677, partial [Phytophthora sojae]) HSP 1 Score: 324.3 bits (830), Expect = 2.900e-85 Identity = 164/206 (79.61%), Postives = 178/206 (86.41%), Query Frame = 0 Query: 19 IPSLAKYKLVFLGDQGVGKTSIITRFMYDTFEKNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDITNRASFLNTSKWVEDVRNERGNDVIIMLVGNKTDLSDRRQVSTEEGEDKAKQENIMFIETSAKAGFNIKPLFRKLATALPGMESAQSQGSANLIDIKLAATPATSSSDEAEARSRCSC 225 I LAKYKLVFLGDQGVGKTS+ITRFMYDTF+ YQATIGIDFLSKTMY+EDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDITNRASFLNTSKW+EDVR ERG DV+IMLVGNKTD+SDRRQVS EEG DKAK+EN+MFIETSAKAG+NIK LFRKLAT LPGME+ G +NLIDIKL A P + +C+C Sbjct: 1 IAPLAKYKLVFLGDQGVGKTSMITRFMYDTFDNAYQATIGIDFLSKTMYMEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDITNRASFLNTSKWIEDVRTERGQDVVIMLVGNKTDISDRRQVSIEEGSDKAKEENVMFIETSAKAGYNIKALFRKLATVLPGMENTMISGDSNLIDIKLTAAPPPKEN----TAEQCNC 202
BLAST of NO03G02760 vs. NCBI_GenBank
Match: OQR99316.1 (Rab6 family GTPase [Thraustotheca clavata]) HSP 1 Score: 319.7 bits (818), Expect = 7.200e-84 Identity = 166/207 (80.19%), Postives = 178/207 (85.99%), Query Frame = 0 Query: 19 IPSLAKYKLVFLGDQGVGKTSIITRFMYDTFEKNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDITNRASFLNTSKWVEDVRNERGNDVIIMLVGNKTDLSDRRQVSTEEGEDKAKQENIMFIETSAKAGFNIKPLFRKLATALPGMESA-QSQGSANLIDIKLAATPATSSSDEAEARSRCSC 225 I LAKYKLVFLGDQGVGKTS+ITRFMYDTF+ YQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDITNRASFLNTSKW+EDVR ERG DV+IMLVGNKTD++DRRQVS EEG DK+K+EN+MFIETSAKAG NIK LFRKLAT LPGME+ + G ANLIDIKL+A PA S C C Sbjct: 10 IAPLAKYKLVFLGDQGVGKTSMITRFMYDTFDNAYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDITNRASFLNTSKWIEDVRAERGQDVVIMLVGNKTDIADRRQVSIEEGSDKSKEENVMFIETSAKAGHNIKALFRKLATVLPGMENTPAATGDANLIDIKLSAAPAPKES----TAETCGC 212
BLAST of NO03G02760 vs. NCBI_GenBank
Match: XP_008607023.1 (Ras-like protein Rab-6A [Saprolegnia diclina VS20] >EQC39751.1 Ras-like protein Rab-6A [Saprolegnia diclina VS20]) HSP 1 Score: 318.2 bits (814), Expect = 2.100e-83 Identity = 169/218 (77.52%), Postives = 181/218 (83.03%), Query Frame = 0 Query: 8 MSPSSPASLPQIPSLAKYKLVFLGDQGVGKTSIITRFMYDTFEKNYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDITNRASFLNTSKWVEDVRNERGNDVIIMLVGNKTDLSDRRQVSTEEGEDKAKQENIMFIETSAKAGFNIKPLFRKLATALPGMESAQSQGS-ANLIDIKLAATPATSSSDEAEARSRCSC 225 MS S I LAKYKLVFLGDQGVGKTS+ITRFMYDTF+ YQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDITNRASFLNTSKW+EDVR ERG DV+IMLVGNKTD++DRRQVS EEG DKAK+EN+MFIETSAKAG NIK LFRKLAT LPGME+ + + ANLIDIKL+A PA S C C Sbjct: 1 MSSSEAKPPVAIAPLAKYKLVFLGDQGVGKTSMITRFMYDTFDNAYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDITNRASFLNTSKWIEDVRAERGQDVVIMLVGNKTDIADRRQVSIEEGADKAKEENVMFIETSAKAGHNIKALFRKLATVLPGMETTPAAATDANLIDIKLSAAPAPKES----TAETCGC 214 The following BLAST results are available for this feature:
BLAST of NO03G02760 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO03G02760 ID=NO03G02760|Name=NO03G02760|organism=Nannochloropsis oceanica|type=gene|length=1787bpback to top protein sequence of NO03G02760.1 >NO03G02760.1-protein ID=NO03G02760.1-protein|Name=NO03G02760.1|organism=Nannochloropsis oceanica|type=polypeptide|length=225bpback to top Synonyms
Publications
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