NO03G01190, NO03G01190 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO03G01190 vs. NCBI_GenBank
Match: EWM29587.1 (s-adenosylmethionine:trna ribosyltransferase-isomerase [Nannochloropsis gaditana]) HSP 1 Score: 637.1 bits (1642), Expect = 4.700e-179 Identity = 334/520 (64.23%), Postives = 385/520 (74.04%), Query Frame = 0 Query: 4 LSQLKGVVS-APAQDDSPPL--------VELPPASALDYLLPDVRIAKRPAEPRDASLLLVSDA---STDQENDGLWTCDATFRDLPSFLPAKSLLVLNQSRVITARLLMQKKGTGGKAEVLCISPLKPSWDPAVALAAPSGQSVWQCMIGGKNIKAGSRLVLEAGEGLTLTADVESREGKNGLVRFSWTSIFQPTLQSLSFGTVLERVGKIPLPPYMNRVSDAADVQDYQTVYAMAQGSVAAPTAGLHFTKSLLEQLQTGPKAIDPCHLTLHVGAGTFQPVSGDDVSQHTMHWERVSVPLTTLDALIEASGSGRPILPVGTTSVRTLESLYWXXXXXXXXXXXXXXXXXXXXXXXQRSVLDLSLGQWDAYQFGGSSTRQRPCTFVPAATALDALAKQAREEGVESVGGETQLMVAPGYRFALCDGLITNFHQPRSTLLLLVGALMGGLGPVHRIYRHALSNG-YRFLSFGDSNLTIPPARTLLPVRPGRGVGAKGGVVDWPRMGRGGGGGREGWTCLSD 511 ++Q+ G+V+ P Q PP+ ELPPA+ LDY LP+ IAKRPAEPRDASLLLVSDA S+ + W D FR+LPSFLPAKSLLVLN+SRVITARLLM+K+GTGGKAEVLCISP+ PSWDPA+AL A S +SVW+CMIGG+NIKAGSRLVL GL LT VE+REGK+GLVRFSWT +FG VLE VGKIPLPPYMNR SD AD+QDYQTVYA A+GSVAAPTAGLHFT SLL+QL+ GP+ I+ C+LTLHVGAGTFQPV+G +V +H MHWER+ VP+ L+ LIEA+GSGRP++PVGTTSVRTLE+LYW + SV +LSLGQWDAY +G Q + VPA AL+AL +A+ EGV+ VGGETQLM+APGYRFALCDGLITNFHQPRSTLLLLVGA +GGLGPVHRIYRHALS G YRFLSFGDSNL IPPAR +LPVRP RG + V WPR G G E W L D Sbjct: 15 MTQVGGMVALRPPQPAFPPVYDEINVCPFELPPANDLDYPLPETCIAKRPAEPRDASLLLVSDASSLSSTADTVDTWVFDGIFRELPSFLPAKSLLVLNRSRVITARLLMRKEGTGGKAEVLCISPVSPSWDPAIALTALSNRSVWRCMIGGRNIKAGSRLVLTTENGLCLTGQVEAREGKDGLVRFSWTHTAHGKESPPTFGDVLEDVGKIPLPPYMNRASDTADLQDYQTVYATARGSVAAPTAGLHFTHSLLQQLRNGPQQIETCYLTLHVGAGTFQPVTGKEVGEHAMHWERIQVPMDALETLIEATGSGRPMVPVGTTSVRTLETLYWWGVRLLSALPSSCSAQRPSTLLSEDSVTNLSLGQWDAYHYGAKWPTQ-ASSLVPAVHALEALRDRAKMEGVDHVGGETQLMIAPGYRFALCDGLITNFHQPRSTLLLLVGAFLGGLGPVHRIYRHALSKGSYRFLSFGDSNLMIPPARVILPVRPKRGNVSGKCAVAWPRKGWAAGVKEERWVKLPD 533
BLAST of NO03G01190 vs. NCBI_GenBank
Match: XP_005706453.1 (S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Galdieria sulphuraria] >EME29933.1 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Galdieria sulphuraria]) HSP 1 Score: 319.3 bits (817), Expect = 2.100e-83 Identity = 192/446 (43.05%), Postives = 249/446 (55.83%), Query Frame = 0 Query: 29 SALDYLLPDVRIAKRPAEPRDASLLLVSDASTDQENDGLWTCDATFRDLPSFLPAKSLLVLNQSRVITARLLMQKKGTGGKAEVLCISPL-KPSWDPAVALAAPSGQSVWQCMIGGKNIKAGSRLVLEAGEGLTLTADVESREGKNGLVRFSWTSIFQPTLQSLSFGTVLERVGKIPLPPYMNRVSDAADVQDYQTVYAMAQGSVAAPTAGLHFTKSLLEQLQTGPKAIDPCHLTLHVGAGTFQPVSGDDVSQHTMHWERVSVPLTTLDALIEASGSGRPILPVGTTSVRTLESLYWXXXXXXXXXXXXXXXXXXXXXXXQRSVLDLSLGQWDAYQFGGS--STRQRPC-TFVPA-ATALDALAKQAREEGVESVGGETQLMVAPGYRFALCDGLITNFHQPRSTLLLLVGALMGGLGPVHRIYRHALSNGYRFLSFGDSNLTIPP 470 S DY LP+ RIA P PRDAS LLV+ + G D+TFR+L FLP ++L+ N S+VI ARL M+K TGG EVLC+ P+ K + + A+ W C + GKN+K G++L L+ E L A+++ + + L+RF+W S + F +LE+ G IPLPPYM R D YQTVYA +GSVAAPTAGLHFT LL +L+ K + +TLHVGAGTF P+ + VS+H MH ER V LT L L E RP + VGTTSVRTLE+LYW Q DLSL QW Y+ S T C + +P LDAL E +S+ G T+L++ P Y F + D +ITNFHQPRSTLL+LV A +G + +YRHAL + YRFLS+GD +L P Sbjct: 54 SDYDYQLPEDRIALSPTTPRDASKLLVAVCGS-----GTVIADSTFRNLDKFLPDNAVLISNDSKVIAARLFMRKVETGGLVEVLCLDPITKTTLESLEAV----NSCEWLCFVRGKNVKPGTQLFLDDMES-PLKAEIQEKYEREALIRFTWNS-----GREYKFRDILEKHGIIPLPPYMKRNVTKDDRTSYQTVYATNEGSVAAPTAGLHFTPQLLSKLE--QKNVSLVRVTLHVGAGTFSPIVTESVSKHDMHDERFHVTLTALKQLKENCQQSRPFVAVGTTSVRTLETLYW---------IGYQLITSEDFRSRQCPTEDLSLSQWFPYERESSLMQTNTSACNSHLPTRMEILDALISWLEERACDSIMGRTKLIIVPNYPFFMVDAMITNFHQPRSTLLMLVAAFLGDRSALFHVYRHALEHDYRFLSYGDGSLLASP 473
BLAST of NO03G01190 vs. NCBI_GenBank
Match: KER08990.1 (hypothetical protein HY22_14415 [Chlorobium sp. GBChlB]) HSP 1 Score: 316.6 bits (810), Expect = 1.400e-82 Identity = 189/444 (42.57%), Postives = 260/444 (58.56%), Query Frame = 0 Query: 29 SALDYLLPDVRIAKRPAEPRDASLLLVSDASTDQENDGLWTCDATFRDLPSFLPAKSLLVLNQSRVITARLLMQKKGTGGKAEVLCISPLKPSWDPAVALAAPSGQSVWQCMIGGKNIKAG---SRLVLEAGEGLTLTADVESREGKNGLVRFSWTSIFQPTLQSLSFGTVLERVGKIPLPPYMNRVSDAADVQDYQTVYAMAQGSVAAPTAGLHFTKSLLEQLQTGPKAIDPCHLTLHVGAGTFQPVSGDDVSQHTMHWERVSVPLTTLDALI----EASGSGRPILPVGTTSVRTLESLYWXXXXXXXXXXXXXXXXXXXXXXXQRSVLDLSLGQWDAYQFGGSSTRQRPCTFVPAATALDALAKQAREEGVESVGGETQLMVAPGYRFALCDGLITNFHQPRSTLLLLVGALMGGLGPVHRIYRHALSNGYRFLSFGDSNL 466 S DY LP IAK P RD S LLV+DA T + F +LP LP+K+LL+ N ++VI+ARL +QK+ +GGK E+LCI + S D A L G +VW+C+IGG+ ++ G S+ L G+ + L+A + + VRF W+ Q L F VLE +G++PLPPY+ R +D +D YQTVYA GSVAAPTAGLHFT ++ ++L+ K+ID LTLHVG GTF+P+ DV+ H MH ER++VP TL+ L+ G ++ VGTTSVRTLE+LYW R+ + L QWD+Y+ T A+ +L L + A + G+ ++ GETQL +APGY++ALCDG+ITNFHQP STL+LLV + G ++Y AL NGYRFLS+GD++L Sbjct: 13 SDYDYDLPAECIAKFPLAERDQSKLLVADALTGRLE------HRRFFELPDLLPSKALLICNNTKVISARLHLQKQ-SGGKVEILCIESAEASPDNAFGLMETDG-AVWKCLIGGR-VREGMELSKAGLFNGKPIFLSAKILPKTNGETQVRFQWSP------QCLPFVAVLETLGQVPLPPYLKRDADESDKVRYQTVYAKQGGSVAAPTAGLHFTDAVFDRLR--EKSIDIAELTLHVGLGTFKPIESADVADHAMHGERIAVPKDTLNKLLAQLERRKDGGGKMIAVGTTSVRTLETLYW------------FGVRLAKKDGDARNSNHIMLSQWDSYRLSDGG------TLPDASESLKTLVEWAEQRGLSTISGETQLFIAPGYQYALCDGIITNFHQPHSTLILLVATFL-GKSLWKKVYDEALQNGYRFLSYGDASL 420
BLAST of NO03G01190 vs. NCBI_GenBank
Match: PIO48665.1 (S-adenosylmethionine tRNA ribosyltransferase [Chlorobium sp. 445]) HSP 1 Score: 315.1 bits (806), Expect = 4.000e-82 Identity = 188/436 (43.12%), Postives = 255/436 (58.49%), Query Frame = 0 Query: 33 YLLPDVRIAKRPAEPRDASLLLVSDASTDQENDGLWTCDATFRDLPSFLPAKSLLVLNQSRVITARLLMQKKGTGGKAEVLCISPLKPSWDPAVALAAPSGQSVWQCMIGGKNIKAGSRL---VLEAGEGLTLTADVESREGKNGLVRFSWTSIFQPTLQSLSFGTVLERVGKIPLPPYMNRVSDAADVQDYQTVYAMAQGSVAAPTAGLHFTKSLLEQLQTGPKAIDPCHLTLHVGAGTFQPVSGDDVSQHTMHWERVSVPLTTLDALIEASGSGRPILPVGTTSVRTLESLYWXXXXXXXXXXXXXXXXXXXXXXXQRSVLDLSLGQWDAYQFGGSSTRQRPCTFVPAATALDALAKQAREEGVESVGGETQLMVAPGYRFALCDGLITNFHQPRSTLLLLVGALMGGLGPVHRIYRHALSNGYRFLSFGDSNL 466 Y LP+ +IA P RD S LL+ A T + F DLP LPA++LLV N S+VI ARL + KK +GGK EVLC+ P +P+ D A+AL A G W+C++ G+N+KA L V+ + L L A + + G + F W QP + L F VLE VGK PLPPY+ R +D YQTVYA ++GSVAAPTAGLHFT ++LE+L+ K + LTLHVG GTF+PV +V H MH E++SVP TL L G+P++ VGTTS+R LESLYW +S++++ QW+AY + T L+A+ + ++ ++ + G+TQL++ PGYR+ +CDGLITNFHQPRSTL+LLV A +GG ++Y AL NGYRFLS+GDS+L Sbjct: 20 YDLPEEQIATAPLPERDQSKLLMVQAKTGE------ISHHHFSDLPDLLPAETLLVFNNSKVIAARLAL-KKQSGGKVEVLCVEPSEPNSDIALALLA-KGAVKWKCLLHGRNLKALMTLSTSVMHQAKPLLLKATLVEK-GMESTLCFEW----QP--KELPFLEVLEAVGKAPLPPYLKREPTRSDKLRYQTVYAKSEGSVAAPTAGLHFTPAVLERLR--QKGVSSAELTLHVGMGTFKPVQQSNVQHHVMHAEQISVPKQTLLTLHNHIEKGKPVVAVGTTSMRVLESLYW----------FGVKLLLKDNKVLHKSIMNVE--QWEAYTLASQLS-----TLPATVQGLEAVLECLQKHSLDGLSGKTQLIIVPGYRYMMCDGLITNFHQPRSTLILLVAAFLGG-ELWKKVYNEALQNGYRFLSYGDSSL 420
BLAST of NO03G01190 vs. NCBI_GenBank
Match: PKV66317.1 (S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pontibacter ramchanderi]) HSP 1 Score: 312.4 bits (799), Expect = 2.600e-81 Identity = 187/438 (42.69%), Postives = 248/438 (56.62%), Query Frame = 0 Query: 33 YLLPDVRIAKRPAEPRDASLLLVSDASTDQENDGLWTCDATFRDLPSFLPAKSLLVLNQSRVITARLLMQKKGTGGKAEVLCISPLKPSWDPAVALAAPSGQSVWQCMIGGKNIKAGSRLVLEAGEGLTLTADVESREGKNGLVRFSWTSIFQPTLQSLSFGTVLERVGKIPLPPYMNRVSDAADVQDYQTVYAMAQGSVAAPTAGLHFTKSLLEQLQTGPKAIDPCHLTLHVGAGTFQPVSGDDVSQHTMHWERVSVPLTTLDALIEASGSGRPILPVGTTSVRTLESLYWXXXXXXXXXXXXXXXXXXXXXXXQRSVLDLSLGQWDAYQFGGSSTRQRPCTFVPAAT--ALDALAKQAREEGVESVGGETQLMVAPGYRFALCDGLITNFHQPRSTLLLLVGALMGGLGPVHRIYRHALSNGYRFLSFGDSNLTIP 469 Y LPD RIAK P RD S LL T D TF +LP LP SLLV N ++V+ ARL+ K TGG E+ C+ P+ P + +A+ +G W+C++G L L EG T+TA+ E+++ + L+RF+WT L+F VLER G++PLPPY+NR D YQT+YA +G+VAAPTAGLHFT +++ LQ K ID +LTLHVGAGTF+PV D + H MH E++ V +D L+ S GRP++PVGTTS+R+LESLYW + +L + QW Y+ T P AT AL AL E + TQ+++APGY F +C+GL+TNFHQP STLLLLV AL+G ++YRHAL NGYRFLS+GDS+L +P Sbjct: 33 YELPDERIAKFPLPERDQSKLLYYQHHT--------ISDHTFTELPELLPTGSLLVFNNTKVVQARLIFHKP-TGGAVEIFCLEPVAPHREVQLAM-QQTGSCTWKCLVGNNKRWKEGPLSLHF-EGGTVTAERETQQDGHFLIRFAWTP------AQLTFAEVLERCGRLPLPPYLNRELTPEDRTRYQTIYARNEGAVAAPTAGLHFTDNVMADLQA--KGIDSTYLTLHVGAGTFKPVKADTMEAHEMHAEQLMVSRHVVDQLL--SHLGRPLIPVGTTSMRSLESLYW--------------LGTLLLQQPELKPEELHVTQWLPYE-----------TSTPPATKDALHALLDYMARHQTEHLHASTQIIIAPGYSFKVCNGLVTNFHQPESTLLLLVAALIG--EDWKQVYRHALDNGYRFLSYGDSSLLLP 422
BLAST of NO03G01190 vs. NCBI_GenBank
Match: WP_101443714.1 (S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pontibacter ramchanderi]) HSP 1 Score: 312.4 bits (799), Expect = 2.600e-81 Identity = 187/438 (42.69%), Postives = 248/438 (56.62%), Query Frame = 0 Query: 33 YLLPDVRIAKRPAEPRDASLLLVSDASTDQENDGLWTCDATFRDLPSFLPAKSLLVLNQSRVITARLLMQKKGTGGKAEVLCISPLKPSWDPAVALAAPSGQSVWQCMIGGKNIKAGSRLVLEAGEGLTLTADVESREGKNGLVRFSWTSIFQPTLQSLSFGTVLERVGKIPLPPYMNRVSDAADVQDYQTVYAMAQGSVAAPTAGLHFTKSLLEQLQTGPKAIDPCHLTLHVGAGTFQPVSGDDVSQHTMHWERVSVPLTTLDALIEASGSGRPILPVGTTSVRTLESLYWXXXXXXXXXXXXXXXXXXXXXXXQRSVLDLSLGQWDAYQFGGSSTRQRPCTFVPAAT--ALDALAKQAREEGVESVGGETQLMVAPGYRFALCDGLITNFHQPRSTLLLLVGALMGGLGPVHRIYRHALSNGYRFLSFGDSNLTIP 469 Y LPD RIAK P RD S LL T D TF +LP LP SLLV N ++V+ ARL+ K TGG E+ C+ P+ P + +A+ +G W+C++G L L EG T+TA+ E+++ + L+RF+WT L+F VLER G++PLPPY+NR D YQT+YA +G+VAAPTAGLHFT +++ LQ K ID +LTLHVGAGTF+PV D + H MH E++ V +D L+ S GRP++PVGTTS+R+LESLYW + +L + QW Y+ T P AT AL AL E + TQ+++APGY F +C+GL+TNFHQP STLLLLV AL+G ++YRHAL NGYRFLS+GDS+L +P Sbjct: 15 YELPDERIAKFPLPERDQSKLLYYQHHT--------ISDHTFTELPELLPTGSLLVFNNTKVVQARLIFHKP-TGGAVEIFCLEPVAPHREVQLAM-QQTGSCTWKCLVGNNKRWKEGPLSLHF-EGGTVTAERETQQDGHFLIRFAWTP------AQLTFAEVLERCGRLPLPPYLNRELTPEDRTRYQTIYARNEGAVAAPTAGLHFTDNVMADLQA--KGIDSTYLTLHVGAGTFKPVKADTMEAHEMHAEQLMVSRHVVDQLL--SHLGRPLIPVGTTSMRSLESLYW--------------LGTLLLQQPELKPEELHVTQWLPYE-----------TSTPPATKDALHALLDYMARHQTEHLHASTQIIIAPGYSFKVCNGLVTNFHQPESTLLLLVAALIG--EDWKQVYRHALDNGYRFLSYGDSSLLLP 404
BLAST of NO03G01190 vs. NCBI_GenBank
Match: WP_025603991.1 (S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pontibacter actiniarum] >ARS34161.1 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pontibacter actiniarum]) HSP 1 Score: 307.0 bits (785), Expect = 1.100e-79 Identity = 188/438 (42.92%), Postives = 251/438 (57.31%), Query Frame = 0 Query: 33 YLLPDVRIAKRPAEPRDASLLLVSDASTDQENDGLWTCDATFRDLPSFLPAKSLLVLNQSRVITARLLMQKKGTGGKAEVLCISPLKPSWDPAVALAAPSGQSVWQCMIG-GKNIKAGSRLVLEAGEGLTLTADVESREGKNGLVRFSWTSIFQPTLQSLSFGTVLERVGKIPLPPYMNRVSDAADVQDYQTVYAMAQGSVAAPTAGLHFTKSLLEQLQTGPKAIDPCHLTLHVGAGTFQPVSGDDVSQHTMHWERVSVPLTTLDALIEASGSGRPILPVGTTSVRTLESLYWXXXXXXXXXXXXXXXXXXXXXXXQRSVLDLSLGQWDAYQFGGSSTRQRPCTFVPAAT-ALDALAKQAREEGVESVGGETQLMVAPGYRFALCDGLITNFHQPRSTLLLLVGALMGGLGPVHRIYRHALSNGYRFLSFGDSNLTIP 469 Y LPD RIAK P RD S LL G D TF DLP LP +LLV N ++V+ ARLLMQK+ TGG E+ C+ P+ P + +A+ +G S W+C++G K K+G V EG L A E+++ + L+RF+W L+F VLER G++PLPPY+NR D YQT+YA QG+VAAPTAGLHFT ++ QLQ +D +LTLHVGAGTF+PV + + +H MH E++ + T L L+ + P++PVGTTS+R+LESLYW + + L + QW AY+ T PAAT AL AL +G + + TQ+++APGY F +C GL+TNFHQP STLLLLV AL+G +Y+HAL NGYRFLS+GDS+L +P Sbjct: 14 YELPDKRIAKFPLPERDQSKLL-------HYRQG-QIVDRTFTDLPQLLPPHTLLVFNDTKVVQARLLMQKE-TGGLVEIFCLEPVAPHREVQLAM-QQTGSSTWKCLVGNNKRWKSGP--VKLHFEGGILEAAREAQQEGHFLIRFTWDP------AELTFAEVLERCGRLPLPPYLNRDLTPDDHTRYQTIYANQQGAVAAPTAGLHFTARVMHQLQAA--GMDTAYLTLHVGAGTFKPVKAEVMEEHEMHAEQLYITRTFLQRLLRQLDN--PVIPVGTTSMRSLESLYW--------------LGAKVLEQPELPMQQLHVTQWQAYE----------STNPPAATNALQALLAYMDRQGTDYLHASTQIIIAPGYTFRICRGLVTNFHQPESTLLLLVSALIG--ENWRTVYKHALDNGYRFLSYGDSSLLLP 403
BLAST of NO03G01190 vs. NCBI_GenBank
Match: WP_076670036.1 (S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pontibacter indicus] >SIT92696.1 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pontibacter indicus]) HSP 1 Score: 307.0 bits (785), Expect = 1.100e-79 Identity = 188/437 (43.02%), Postives = 247/437 (56.52%), Query Frame = 0 Query: 33 YLLPDVRIAKRPAEPRDASLLLVSDASTDQENDGLWTCDATFRDLPSFLPAKSLLVLNQSRVITARLLMQKKGTGGKAEVLCISPLKPSWDPAVALAAPSGQSVWQCMIG-GKNIKAGSRLVLEAGEGLTLTADVESREGKNGLVRFSWTSIFQPTLQSLSFGTVLERVGKIPLPPYMNRVSDAADVQDYQTVYAMAQGSVAAPTAGLHFTKSLLEQLQTGPKAIDPCHLTLHVGAGTFQPVSGDDVSQHTMHWERVSVPLTTLDALIEASGSGRPILPVGTTSVRTLESLYWXXXXXXXXXXXXXXXXXXXXXXXQRSVLDLSLGQWDAYQFGGSSTRQRPCTFVPAATALDALAKQAREEGVESVGGETQLMVAPGYRFALCDGLITNFHQPRSTLLLLVGALMGGLGPVHRIYRHALSNGYRFLSFGDSNLTIP 469 Y LP+ RIAK P RD S LL + G+ D TF DLP LPA SLLV N ++V+ ARL+ +K TGG EV C+ P+KP + +A+ + W+C++G K K G + EG +TA+ E+++ + L+RF+WT L+F VLER GK+PLPPY+NR D YQT+YA +G+VAAPTAGLHFT ++ QLQ K ID +LTLHVGAGTF+PV D + H MH E++ V + L+E GRP++PVGTTS+R+LESLYW DL + QW Y+ T AA AL L + + TQ+++APGY F LC GL+TNFHQP STLLLLV AL+G ++YRHAL N YRFLS+GDS+L +P Sbjct: 15 YELPEERIAKFPLPERDQSKLLY------YKQQGI--ADHTFTDLPELLPAGSLLVFNNTKVVQARLIF-RKPTGGAVEVFCLEPVKPHREVQLAM-QQTRSCTWKCLVGNNKRWKEGPLKIF--FEGGVVTAEREAQQEGHFLIRFTWTP------AELTFAEVLERCGKLPLPPYLNRELIPEDRSRYQTIYARNEGAVAAPTAGLHFTDKVMAQLQA--KGIDSTYLTLHVGAGTFKPVKADTMETHEMHAEQLMVSREVVAQLLE--HLGRPLIPVGTTSMRSLESLYWLGTLLWRQPDLRPE--------------DLHVTQWLPYEAE---------TPPAAAEALQTLLNYMDRHQTQYLHASTQIIIAPGYTFRLCKGLVTNFHQPESTLLLLVAALIG--EDWKQVYRHALDNDYRFLSYGDSSLLLP 404
BLAST of NO03G01190 vs. NCBI_GenBank
Match: WP_054411582.1 (S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Hymenobacter sp. DG25A] >ALD20312.1 S-adenosylmethionine tRNA ribosyltransferase [Hymenobacter sp. DG25A]) HSP 1 Score: 306.2 bits (783), Expect = 1.900e-79 Identity = 189/441 (42.86%), Postives = 253/441 (57.37%), Query Frame = 0 Query: 33 YLLPDVRIAKRPAEPRDASLLLVSDASTDQENDGLWTCDATFRDLPSFLPAKSLLVLNQSRVITARLLMQKKGTGGKAEVLCISPLKP--SWDPAVALAAPSGQSVWQCMIG-GKNIKAGSRLV--LEAGEGLTLTADVESREGKNGLVRFSWTSIFQPTLQSLSFGTVLERVGKIPLPPYMNRVSDAADVQDYQTVYAMAQGSVAAPTAGLHFTKSLLEQLQTGPKAIDPCHLTLHVGAGTFQPVSGDDVSQHTMHWERVSVPLTTLDALIEASGSGRPILPVGTTSVRTLESLYWXXXXXXXXXXXXXXXXXXXXXXXQRSVLDLSLGQWDAYQFGGSSTRQRPCTFVPAATALDALAKQAREEGVESVGGETQLMVAPGYRFALCDGLITNFHQPRSTLLLLVGALMGGLGPVHRIYRHALSNGYRFLSFGDSNLTIP 469 Y LP RIA P RD S LLV G T D F +LP+ LPA SLLV N ++V+ ARL K TGG E+ C+ P+ P + +PA+ +G VW+C++G GK K+G L+ + G+ TLTA+ + +++FSW QP L F VL G +PLPPY+NR D YQTVYA +G+VAAPTAGLHF++++L++LQ + I+ H+TLHVGAGTFQPV D +++H MH E +SV T L L+ + + P+L VGTTS+RTLESLYW + + L + QW Y+ P + +PAA AL AL + G + + TQL++APGYRF + GLITNFHQP STLLLLV AL+G ++Y HALS YRFLS+GDS+L +P Sbjct: 15 YQLPPERIAPEPLPQRDQSRLLV-------YRQGQLT-DRRFYELPTELPADSLLVFNDTKVVRARLFAHKP-TGGIIELFCLEPVAPHRAIEPAM---QQTGSCVWKCLVGNGKRWKSGPVLLEFMAQGQPATLTAERQEVADGYSIIQFSW----QPA--ELPFAEVLRGAGHLPLPPYLNRPDTDVDAVRYQTVYAAQEGAVAAPTAGLHFSEAVLQELQA--RGIETAHVTLHVGAGTFQPVKADRMAEHPMHAEPISVTPTLLRQLL--AHTQGPVLAVGTTSLRTLESLYW--------------LGVQLLLEPASANMSLHVSQWQPYE---------PGSEIPAAEALQALLHYLEQTGADVLHATTQLLIAPGYRFRIAQGLITNFHQPESTLLLLVAALVG--PQWRQLYEHALSKDYRFLSYGDSSLLLP 408
BLAST of NO03G01190 vs. NCBI_GenBank
Match: WP_089321217.1 (S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pontibacter ummariensis] >SNT13453.1 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pontibacter ummariensis] >PRY06744.1 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pontibacter ummariensis]) HSP 1 Score: 306.2 bits (783), Expect = 1.900e-79 Identity = 184/437 (42.11%), Postives = 254/437 (58.12%), Query Frame = 0 Query: 33 YLLPDVRIAKRPAEPRDASLLLVSDASTDQENDGLWTCDATFRDLPSFLPAKSLLVLNQSRVITARLLMQKKGTGGKAEVLCISPLKPSWDPAVALAAPSGQSVWQCMIG-GKNIKAGSRLVLEAGEGLTLTADVESREGKNGLVRFSWTSIFQPTLQSLSFGTVLERVGKIPLPPYMNRVSDAADVQDYQTVYAMAQGSVAAPTAGLHFTKSLLEQLQTGPKAIDPCHLTLHVGAGTFQPVSGDDVSQHTMHWERVSVPLTTLDALIEASGSGRPILPVGTTSVRTLESLYWXXXXXXXXXXXXXXXXXXXXXXXQRSVLDLSLGQWDAYQFGGSSTRQRPCTFVPAATALDALAKQAREEGVESVGGETQLMVAPGYRFALCDGLITNFHQPRSTLLLLVGALMGGLGPVHRIYRHALSNGYRFLSFGDSNLTIP 469 Y LP+ RIAK P RD S LL+ D TF DLP LP +SLLV N ++V+ ARLL QK+ TGG E+ C+ P+ P + +A+ +G VW+C++G K K+GS V +G LTA+ ++++ + L+RF+W +P L+F VLER GK+PLPPY+NR D YQT+YA QG+VAAPTAGLHFT+ ++E+L+ + I +LTLHVGAGTF+PV + + +H MH E++ + L L+ +PI+PVGTTS+R+LESLYW + + DLS+ QW AY+ T A AL AL + + TQ+++APGY F +C GL+TNFHQP STLLLLV AL+G ++Y+HAL N YRFLS+GDS+L +P Sbjct: 14 YELPEERIAKFPLPERDQSKLLLYRQGQ--------MADHTFTDLPQLLPPRSLLVFNDTKVVQARLLFQKE-TGGTVEIFCLEPVAPYQEVQLAM-QQTGNCVWKCLVGNNKRWKSGS--VKLRFDGGMLTAERKAQQEGHFLIRFTW----EPA--ELTFAEVLERCGKLPLPPYLNRDLTPDDHTRYQTIYANQQGAVAAPTAGLHFTERVMEKLR--EQQIATAYLTLHVGAGTFKPVKAEVMEEHEMHAEQLYITKPLLQRLL--LQEEKPIIPVGTTSMRSLESLYW--------------LGAKVLEQPELPLKDLSVSQWQAYETVAPPT---------ATDALSALLAYMERQHANYLHASTQIIIAPGYTFRICKGLVTNFHQPESTLLLLVSALIG--EDWRKVYQHALENDYRFLSYGDSSLLLP 403 The following BLAST results are available for this feature:
BLAST of NO03G01190 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO03G01190 ID=NO03G01190|Name=NO03G01190|organism=Nannochloropsis oceanica|type=gene|length=1533bpback to top protein sequence of NO03G01190.1 >NO03G01190.1-protein ID=NO03G01190.1-protein|Name=NO03G01190.1|organism=Nannochloropsis oceanica|type=polypeptide|length=511bpback to top Synonyms
Publications
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