NO03G00960, NO03G00960 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO03G00960 vs. NCBI_GenBank
Match: CBJ28321.1 (cyclopropane-fatty-acyl-phospholipid synthase/ oxidoreductase [Ectocarpus siliculosus]) HSP 1 Score: 355.9 bits (912), Expect = 1.300e-94 Identity = 167/248 (67.34%), Postives = 199/248 (80.24%), Query Frame = 0 Query: 1 MAFKGSLEEAQLRKVDTLISTCRVEKGHTLLDIGFGWGGIAIRAAETIGCKVVGITLSKEQKALAEEKVREKGLEHLIHFELVDYRVFARRHPGAFDRIISCEMIEAVGHSHLGEYFHAVGRLLKPNGVFVMEAITTPESRYVDYLKSTDFINTIVFPGSCCPSLTALMSAMATHSPLSLEGFINIDVHYAETLREWRRRFNRGMSVVKTHGFDDVFVRCWNYYLCYCEAAFESKTEGCLILTFSRPG 249 + GSLE+AQ RK D LI+ R+ K H LLDIGFGWGGI+IRAAET+GC+V GITLSKEQKALAEEKV +GL+ LI FELVDYR FA++HPG FDRIISCEMIEAVGH++LG +F + LL P GV VM+AITTPE+RY +Y++STDFINTI+FPGSCCPSLTAL+SAMA+ S SLEG N+ VHYA TL++WR RFN + V GFD FVRC+NYY YCEA F S+TEG ++LTF+RPG Sbjct: 807 LVLSGSLEKAQERKADALIARARLSKHHRLLDIGFGWGGISIRAAETVGCRVHGITLSKEQKALAEEKVLARGLQDLITFELVDYRDFAKQHPGEFDRIISCEMIEAVGHNYLGTFFASTDALLAPGGVMVMQAITTPENRYEEYIRSTDFINTIIFPGSCCPSLTALLSAMASSSSFSLEGLDNMCVHYAHTLKQWRHRFNHSLDQVMAQGFDSAFVRCFNYYFAYCEAGFVSRTEGLMMLTFARPG 1054
BLAST of NO03G00960 vs. NCBI_GenBank
Match: GAX22236.1 (cyclopropane-fatty-acyl-phospholipid synthase [Fistulifera solaris]) HSP 1 Score: 344.0 bits (881), Expect = 5.000e-91 Identity = 162/252 (64.29%), Postives = 198/252 (78.57%), Query Frame = 0 Query: 1 MAFKGSLEEAQLRKVDTLISTCRVEKGHTLLDIGFGWGGIAIRAAETIGCKVVGITLSKEQKALAEEKVREKGLEHLIHFELVDYRVFARR--HPGAFDRIISCEMIEAVGHSHLGEYFHAVGRLLKPNGVFVMEAITTPESRYVDYLKSTDFINTIVFPGSCCPSLTALMSAMATHSPLSLEGFINIDVHYAETLREWRRRFNRGMSVVKTHGFDDVFVRCWNYYLCYCEAAFESKTEGCLILTFSRPGNT 251 + F+G+LE+AQ RK+DTL+ +++ G T+LDIGFGWGG+++ AA+ GC V GITLS EQKALAE++V+E GLEHLI FE+VDYR F RR + G +DR++SCEMIEAVGH HLGE+F AV ++L +G+ VMEAITTPE RY YL+STDFINTI+FPGSCCPSL AL+ A S L+LE NI +HYA+TL EWRRRFN VV+ GFDDVF+RCWNYYL YCEA F S+TE CLIL FSRPG T Sbjct: 690 LRFRGTLEQAQWRKLDTLLERAQIQPGQTMLDIGFGWGGLSLHAAQKYGCHVTGITLSVEQKALAEQRVKEAGLEHLITFEVVDYRTFCRRPANRGRYDRVLSCEMIEAVGHEHLGEFFWAVEQVLAKDGILVMEAITTPEQRYETYLRSTDFINTIIFPGSCCPSLHALVDAAYRQSCLTLEHIDNIGLHYAQTLAEWRRRFNASEDVVRKLGFDDVFLRCWNYYLTYCEAGFFSQTENCLILVFSRPGCT 941
BLAST of NO03G00960 vs. NCBI_GenBank
Match: GAX19718.1 (cyclopropane-fatty-acyl-phospholipid synthase [Fistulifera solaris]) HSP 1 Score: 338.2 bits (866), Expect = 2.800e-89 Identity = 160/250 (64.00%), Postives = 195/250 (78.00%), Query Frame = 0 Query: 1 MAFKGSLEEAQLRKVDTLISTCRVEKGHTLLDIGFGWGGIAIRAAETIGCKVVGITLSKEQKALAEEKVREKGLEHLIHFELVDYRVFARR--HPGAFDRIISCEMIEAVGHSHLGEYFHAVGRLLKPNGVFVMEAITTPESRYVDYLKSTDFINTIVFPGSCCPSLTALMSAMATHSPLSLEGFINIDVHYAETLREWRRRFNRGMSVVKTHGFDDVFVRCWNYYLCYCEAAFESKTEGCLILTFSRPG 249 + F+G+LE+AQ RK+DTL+ +++ G T+LDIGFGWGG+++ AA+ GC V GITLS EQKALAEE+V+E GLE LI FE+VDYR F RR + G +DR++SCEMIEAVGH HLGE+F AV ++L +G+ VMEAITTPE RY YL+STDFINTI+FPGSCCPSL AL+ A S L+LE NI +HYA+TL EWRRRFN VV+ GFDDVF+RCWNYYL YCEA F S+TE CLIL FSR G Sbjct: 720 LRFRGTLEQAQWRKLDTLLERAQIQPGQTMLDIGFGWGGLSLHAAKKYGCHVTGITLSVEQKALAEERVKEAGLERLITFEVVDYRTFCRRPENRGKYDRVLSCEMIEAVGHEHLGEFFWAVEQVLAKDGILVMEAITTPEQRYETYLRSTDFINTIIFPGSCCPSLHALVDAAYRQSCLTLEHIDNIGLHYAQTLAEWRRRFNASEDVVRKLGFDDVFLRCWNYYLTYCEAGFFSQTENCLILVFSRQG 969
BLAST of NO03G00960 vs. NCBI_GenBank
Match: XP_002183150.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC45368.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 332.4 bits (851), Expect = 1.500e-87 Identity = 165/272 (60.66%), Postives = 202/272 (74.26%), Query Frame = 0 Query: 1 MAFKGSLEEAQLRKVDTLISTCRVEKGHTLLDIGFGWGGIAIRAAETIGCKVVGITLSKEQKALAEEKVREKGLEHLIHFELVDYRVFARR--HPGAFDRIISCEMIEAVGHSHLGEYFHAVGRLLKPNGVFVMEAITTPESRYVDYLKSTDFINTIVFPGSCCPSLTALMSAMATHSPLSLEGFINIDVHYAETLREWRRRFNRGMSVVKTHGFDDVFVRCWNYYLCYCEAAFESKTEGCLILTFSRPGNTQGLLDNTPCRITTALSHPQS 271 + F+GSLEEAQ RK+DTL+ +++ G T+LDIGFGWGG++I AA+ GCKV GITLS EQKALAE++V+E+G+E LI FE+VDYR F R + G FDR++SCEMIEAVGH HL E+F AV ++L +GV VMEAITTPE RY +YL+STDFINTI+FPGSCCPSL AL+ A S L+LE NI +HYA+TL EWRRRFN V+ GFDDVF+R WNYYL YCEA F S+TE CLIL F+RPG C+ TAL +S Sbjct: 668 LVFRGSLEEAQWRKLDTLLDRAQIQPGQTVLDIGFGWGGLSIHAAKKYGCKVTGITLSVEQKALAEKRVKEEGIESLITFEVVDYRTFCARKSNCGMFDRVLSCEMIEAVGHGHLVEFFWAVEQVLCRDGVLVMEAITTPEERYENYLRSTDFINTIIFPGSCCPSLHALVDAAYRGSTLTLEHVDNIGLHYAQTLAEWRRRFNAEEPFVRQLGFDDVFLRAWNYYLTYCEAGFFSQTENCLILVFARPG----------CKALTALCETRS 929
BLAST of NO03G00960 vs. NCBI_GenBank
Match: XP_002294769.1 (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >EED88129.1 predicted protein, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 330.5 bits (846), Expect = 5.700e-87 Identity = 159/250 (63.60%), Postives = 193/250 (77.20%), Query Frame = 0 Query: 2 AFKGSLEEAQLRKVDTLISTCRVEKGHTLLDIGFGWGGIAIRAAETIGCKVVGITLSKEQKALAEEKVREKGLEHLIHFELVDYRVFARR--HPGAFDRIISCEMIEAVGHSHLGEYFHAVGRLLKPNGVFVMEAITTPESRYVDYLKSTDFINTIVFPGSCCPSLTALMSAMATHSPLSLEGFINIDVHYAETLREWRRRFNRGMSVVKTHGFDDVFVRCWNYYLCYCEAAFESKTEGCLILTFSRPGN 250 A + EAQ RK+DTL +++ G TLLDIGFGWGG+++ AA+ GC+V GITLS EQKALAEE+V ++GL HLI+FE+VDYR FARR + G FDR+ISCEMIEAVGH HLGE++ AV ++LK +GV VMEAITTPESRY Y++STDFINT++FPG CPSL AL+ A S L+LE NI +HYAETL EWRRRFN + V+ GFDDVF+R WNYY+ YCEA F S+TE CLIL FSRPGN Sbjct: 623 AMSAAPTEAQWRKLDTLCDRAQLQPGQTLLDIGFGWGGLSLHAAKKYGCRVTGITLSVEQKALAEERVEKEGLGHLINFEVVDYRTFARRKENSGKFDRVISCEMIEAVGHEHLGEFYWAVEQVLKYDGVLVMEAITTPESRYETYIRSTDFINTVIFPGGICPSLHALVDASYKWSTLTLEHIDNIGLHYAETLAEWRRRFNANEASVRKMGFDDVFMRVWNYYMTYCEAGFRSQTEHCLILVFSRPGN 872
BLAST of NO03G00960 vs. NCBI_GenBank
Match: OEU17902.1 (CMAS-domain-containing protein [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 324.7 bits (831), Expect = 3.200e-85 Identity = 154/251 (61.35%), Postives = 192/251 (76.49%), Query Frame = 0 Query: 1 MAFKGSLEEAQLRKVDTLISTCRVEKGHTLLDIGFGWGGIAIRAAETIGCKVVGITLSKEQKALAEEKVREKGLEHLIHFELVDYRVFARR--HPGAFDRIISCEMIEAVGHSHLGEYFHAVGRLLKPNGVFVMEAITTPESRYVDYLKSTDFINTIVFPGSCCPSLTALMSAMATHSPLSLEGFINIDVHYAETLREWRRRFNRGMSVVKTH-GFDDVFVRCWNYYLCYCEAAFESKTEGCLILTFSRPG 249 + FKG+LEEAQ RK+DTL+ +V+ G T+LDIGFGWGG+++ AA+ GC VVGITLS EQ+ALA E+V+ +GLEHLI FE++DYR FARR + G FDR++SCEMIEAVGH HL E+F V ++LKP+G+ VMEAITT E RY +YLKSTDFINT++FPGSCCP L AL+ A S L+LE NI +HYA+TL +WRRRFN V GFDD+F+R WNYYLCYCEA F ++ CLIL F+R G Sbjct: 682 LVFKGTLEEAQWRKLDTLLDRAQVQPGQTVLDIGFGWGGLSLHAAQKYGCTVVGITLSVEQRALAMERVKAQGLEHLITFEVIDYRTFARRPSNIGKFDRVLSCEMIEAVGHDHLHEFFWVVEQVLKPDGILVMEAITTTEERYENYLKSTDFINTVIFPGSCCPCLHALVDAAYKGSRLTLEHIDNIGLHYAQTLADWRRRFNAQSEFVSQDLGFDDIFLRAWNYYLCYCEAGFYARNVNCLILVFARNG 932
BLAST of NO03G00960 vs. NCBI_GenBank
Match: GAQ87328.1 (Cyclopropane-fatty-acyl-phospholipid synthase [Klebsormidium nitens]) HSP 1 Score: 262.3 bits (669), Expect = 1.900e-66 Identity = 126/247 (51.01%), Postives = 162/247 (65.59%), Query Frame = 0 Query: 7 LEEAQLRKVDTLISTCRVEKGHTLLDIGFGWGGIAIRAAETIGCKVVGITLSKEQKALAEEKVREKGLEHLIHFELVDYRVFARRHPGAFDRIISCEMIEAVGHSHLGEYFHAVGRLLKPNGVFVMEAITTPESRYVDYLKSTDFINTIVFPGSCCPSLTALMSAMATHSPLSLEGFINIDVHYAETLREWRRRFNRGMSVVKTHGFDDVFVRCWNYYLCYCEAAFESKTEGCLILTFSRPGNTQGL 254 L++AQLRK+ +I R+ H +L+IGFGWG +++ GC V GITLS++Q LA +V+ GL+ I F L DYR A G FDRI+SCEM+EAVGH ++FH RLL P+G+ V++ ITTPE RY +Y S+DFI +FPG+CCPSLTALM AM THS L +EG NI VHY TL WR F+ S ++ GF FVR W+YY YC A F+++T G L + FSRPGNT GL Sbjct: 621 LKDAQLRKLHAMIDKARITSSHHVLEIGFGWGSMSMELVRRTGCHVTGITLSEQQLQLATARVKAAGLQAKISFMLCDYR--ALPGIGTFDRIVSCEMLEAVGHEFYPDFFHHCDRLLAPDGIMVVQVITTPEERYEEYRCSSDFIKEYIFPGACCPSLTALMQAMTTHSNLCVEGVENIGVHYVPTLLRWRDTFHEKQSEIEAMGFGPKFVRTWDYYFAYCAAGFQTRTIGDLQIIFSRPGNTSGL 865
BLAST of NO03G00960 vs. NCBI_GenBank
Match: XP_005717868.1 (unnamed protein product [Chondrus crispus] >CDF37999.1 unnamed protein product [Chondrus crispus]) HSP 1 Score: 253.8 bits (647), Expect = 6.800e-64 Identity = 132/250 (52.80%), Postives = 163/250 (65.20%), Query Frame = 0 Query: 6 SLEEAQLRKVDTLISTCRVEKGHTLLDIGFGWGGIAIRAAETIGCKVVGITLSKEQKALAEEKVREKGLEHLIHFELVDYRVFARRHPGAFDRIISCEMIEAVGHSHLGEYFHAVGRLLKPNGVFVMEAITTPESRYVDYLKSTDFINTIVFPGSCCPSLTALMSAMATHSPLSLEGFINIDVHYAETLREWRRRF--NRGMSVVKTHGFDDVFVRCWNYYLCYCEAAFESKTEGCLILTFSRPGNTQGL 254 +L+ AQ K+D +I + +LDIG GWG +AIRA + GC+V GITLS+EQ ALA ++ G+ I FELVDYRV A R FDRI+S EMIEAVGH LG +F A+ LL P G+ VM+AITTPE RY +Y +TDFI +FPG CPS AL++AMA +S L +EG NI HYA TL+EWRRRF + V GFDDVFVR W YY CYCEA F ++T G L + FS+ NT L Sbjct: 196 TLDTAQHAKIDKVIDKACITSDSHVLDIGCGWGELAIRAVQRTGCRVTGITLSREQLALANKRAHAAGVADRITFELVDYRVVAARGI-HFDRIVSVEMIEAVGHEFLGTFFAAIQNLLAPQGLLVMQAITTPEERYEEYRTTTDFIQKYIFPGGICPSFEALVTAMAKNSKLCVEGVENIGPHYATTLKEWRRRFLASEKNGDVAAAGFDDVFVRKWVYYFCYCEAGFATRTLGVLQVVFSKSRNTATL 444
BLAST of NO03G00960 vs. NCBI_GenBank
Match: KOO23729.1 (cyclopropane-fatty-acyl-phospholipid synthase [Chrysochromulina sp. CCMP291]) HSP 1 Score: 253.8 bits (647), Expect = 6.800e-64 Identity = 126/297 (42.42%), Postives = 179/297 (60.27%), Query Frame = 0 Query: 6 SLEEAQLRKVDTLISTCRVEKGHTLLDIGFGWGGIAIRAAETIGCKVVGITLSKEQKALAEEKVREKGLEHLIHFELVDYRVFARRHPG-AFDRIISCEMIEAVGHSHLGEYFHAVGRLLKPNGVFVMEAITTPESRYVDYLKSTDFINTIVFPGSCCPSLTALMSAMATHSPLSLEGFINIDVHYAETLREWRRRFNRGMSVVKTHGFDDVFVRCWNYYLCYCEAAFESKTEGCLILTFSRPGN--TQGLLDNTPCRITTALSHPQSPKTTTVSVGTSPRKEGGKEGGGSGPTTPQ 300 SL++AQ+ K+D LIS ++EK HT+L+IGFGWG ++IR A+ +GCK+VG+TLS +QKA AE +V + G+ LI + DYR F G FDR++SCEM+EAVGH +L +++ AV L+ P+G+ V++ ITTP+ RY DY S +FIN +FPG+CCPS AL +A S L++E NI HY TL +WRR F +K GFDD F+R W YY YCE F+ + G L + +S+ N ++ C + L H + ++P G GP TP+ Sbjct: 61 SLQQAQMNKLDLLISKLKLEKHHTVLEIGFGWGALSIRIAQLVGCKIVGLTLSHDQKAEAEMRVAKAGVCDLIQYHYTDYRTFHESSGGRTFDRVVSCEMLEAVGHEYLPDFYKAVDELMAPHGIAVVQVITTPDDRYEDYRHSAEFINVHIFPGACCPSFGALTAACTAASSLTVEHVQNIGPHYVPTLAQWRRNFMANQEKLKKLGFDDAFIRKWEYYFHYCEVGFKLRVLGDLQIVYSKAANLDLNDTVETELCETSRGLEH-----FMDTNASSTPIPYSSNMGAFMGPYTPR 352
BLAST of NO03G00960 vs. NCBI_GenBank
Match: ESQ47479.1 (hypothetical protein EUTSA_v10020049mg [Eutrema salsugineum]) HSP 1 Score: 241.9 bits (616), Expect = 2.700e-60 Identity = 121/249 (48.59%), Postives = 152/249 (61.04%), Query Frame = 0 Query: 7 LEEAQLRKVDTLISTCRVEKGHTLLDIGFGWGGIAIRAAETIGCKVVGITLSKEQKALAEEKVREKGLEHLIHFELVDYRVFARRHPGAFDRIISCEMIEAVGHSHLGEYFHAVGRLLKPNGVFVMEAITTPESRYVDYLKSTDFINTIVFPGSCCPSLTALMSAMATHSPLSLEGFINIDVHYAETLREWRRRFNRGMSVVKTHGFDDVFVRCWNYYLCYCEAAFESKTEGCLILTFSRPGNTQGLLD 256 L AQ+RK+ LI R+EK H +L+IG GWG +AI GCK GITLS EQ AEEKV+E GLE I FEL DYR + H +DRIISCEM+EAVGH + +F L +G+FV++ I+ PE RY +Y S+DFI +FPG C PSL + SAMA+ S L +E NI +HY +TLR WR+ F + GFDD F+R W YY YC A F++ T G + FSRPGN L D Sbjct: 599 LRTAQMRKISLLIDKARIEKNHEVLEIGCGWGTLAIEVVRRTGCKYTGITLSIEQLKYAEEKVKEAGLEDRIKFELCDYRQLSNAH--KYDRIISCEMLEAVGHEFMETFFTHCEAALAEDGIFVLQFISIPEERYDEYRLSSDFIKEYIFPGGCLPSLARVTSAMASSSRLCIENVENIGIHYYQTLRSWRKTFLEREKQIMDLGFDDKFIRTWEYYFDYCAAGFKTLTLGNYQVVFSRPGNVAALGD 845 The following BLAST results are available for this feature:
BLAST of NO03G00960 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO03G00960 ID=NO03G00960|Name=NO03G00960|organism=Nannochloropsis oceanica|type=gene|length=1202bpback to top protein sequence of NO03G00960.1 >NO03G00960.1-protein ID=NO03G00960.1-protein|Name=NO03G00960.1|organism=Nannochloropsis oceanica|type=polypeptide|length=315bpback to top Synonyms
Publications
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