NO03G00770, NO03G00770 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO03G00770 vs. NCBI_GenBank
Match: EWM29617.1 (Bestrophin-like protein [Nannochloropsis gaditana]) HSP 1 Score: 162.5 bits (410), Expect = 1.500e-36 Identity = 91/161 (56.52%), Postives = 106/161 (65.84%), Query Frame = 0
Query: 51 LLLLLFLLPFCLSLHRAIPSAFLGPSHTCFVARHRSPCPTPPFHNFHVVTAATSLPTRRTHTRARGDATFLLDPPQRYQSSDWVENLQSLLDSRIAKRISGHLWFNTAWAGAVTALFEFMPQWHIDAYISPLPHQLMSSALGLLLVFRTNAAYDRFWEARK 212
+L+ L+ FCL + A A + P H + R P HN H + RA+ T LLDPPQRY+SSDW ENL+SL DSRI KRISGHL FNTAWA VT ++E MPQWHI + ISP+PHQLMS+ALGLLLVFRTNAAYDRFWEARK
Sbjct: 79 VLVAAHLVFFCL-VSCASSIALIFPFHAASSSFTRQHVMFRP-HNCHSNPSVNHFVNHIGCRRAKSHVTALLDPPQRYKSSDWAENLRSLFDSRIVKRISGHLLFNTAWATGVTGVYESMPQWHIGSDISPVPHQLMSTALGLLLVFRTNAAYDRFWEARK 237
BLAST of NO03G00770 vs. NCBI_GenBank
Match: AFA52595.1 (hypothetical protein [Vaucheria litorea]) HSP 1 Score: 104.0 bits (258), Expect = 6.400e-19 Identity = 48/89 (53.93%), Postives = 65/89 (73.03%), Query Frame = 0
Query: 128 YQSSDWVENLQSLLDSRIAKRISGHLWFNTAWAGAVTALFEFMPQWHIDAY-ISPLPHQLMSSALGLLLVFRTNAAYDRFWEARKCGAA 216
+ S+DW++N+++L S+I K I+ HLWFNT WA +T + F PQ +ID + IS +P LM+SAL LLL+FR NAAYDRFWE+RK A
Sbjct: 58 FASNDWLDNIKNLPASKINKDITSHLWFNTGWAVLITCIHMFTPQHYIDDFHISTVPQTLMASALSLLLIFRNNAAYDRFWESRKVWGA 146
BLAST of NO03G00770 vs. NCBI_GenBank
Match: CEM06220.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 100.9 bits (250), Expect = 5.400e-18 Identity = 55/125 (44.00%), Postives = 70/125 (56.00%), Query Frame = 0
Query: 87 PCPTPPFHNFHVVTAATSLPTRRTHTRARGDATFLLDPPQRYQSSDWVENLQSLLDSRIAKRISGHLWFNTAWAGAVTALFEFMPQWHIDAYISPLPHQLMSSALGLLLVFRTNAAYDRFWEARK 212
P P P + T + P + L P RY S DW+ +QSL S+I +RI HL++NT WA V AL+E+ P+ LPH +M+SAL LLLVFRTNA+YDRFWEARK
Sbjct: 31 PSPLQPSNILRPHTRKVTRPFPGGEADVPATVSLALKKPVRYSSKDWLYAIQSLPRSKIFERIQSHLFWNTLWAAGVAALWEYYPEL---PEFPVLPHSIMASALALLLVFRTNASYDRFWEARK 152
BLAST of NO03G00770 vs. NCBI_GenBank
Match: OSX68971.1 (hypothetical protein BU14_2020s0001 [Porphyra umbilicalis]) HSP 1 Score: 96.7 bits (239), Expect = 1.000e-16 Identity = 57/129 (44.19%), Postives = 75/129 (58.14%), Query Frame = 0
Query: 86 SPCPTPPFHNFHVVTAATSLPTRRTHTRARGDATFLLDPPQRYQSSDWVENLQSLLDSRIAKRISGHLWFNTAWAGAVTALFEFMPQ---WHIDAYISPLPHQLMSSALGLLLVFRTNAAYDRFWEARK 212
+P P+PP ++ +T TRA + P+RY S+DW NL SL S + +RIS H+ FNT A V L ++ P WH +SPLPH L+ +ALGLLL +RT+AAYDRFWEARK
Sbjct: 71 APTPSPP-----------AVAPTKTVTRA------AIQRPERYSSADWWRNLVSLPQSVVLRRISSHVAFNTIVATLVVFLHQYTPDEKIWH----LSPLPHVLLGTALGLLLSYRTSAAYDRFWEARK 178
BLAST of NO03G00770 vs. NCBI_GenBank
Match: CEM01971.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 94.4 bits (233), Expect = 5.000e-16 Identity = 48/93 (51.61%), Postives = 60/93 (64.52%), Query Frame = 0
Query: 122 LDPPQRYQSSDWVENLQSLLDSRIAKRISGHLWFNTAWAGAVTALFEF---MPQWHIDAYISPLPHQLMSSALGLLLVFRTNAAYDRFWEARK 212
L P RY S DW+ L+SL S I RI HL +NT WA + ++E+ +P + I LPH +MSSA+ LLLVFRTNA+YDRFWEARK
Sbjct: 76 LKKPVRYSSKDWIYALKSLPSSTIFTRIQSHLLWNTVWAALIAGIYEYDPNLPDFPI------LPHTIMSSAVALLLVFRTNASYDRFWEARK 162
BLAST of NO03G00770 vs. NCBI_GenBank
Match: CBN74931.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 94.0 bits (232), Expect = 6.600e-16 Identity = 45/84 (53.57%), Postives = 61/84 (72.62%), Query Frame = 0
Query: 129 QSSDWVENLQSLLDSRIAKRISGHLWFNTAWAGAVTALFEFMPQWHI-DAYISPLPHQLMSSALGLLLVFRTNAAYDRFWEARK 212
+ +DW N+Q+L SR+ I HL++NTA+A V+ + PQ I D ++SP+PH +MS ALGLLLVFRTNAAY+RFWEAR+
Sbjct: 5 KKNDWFANIQNLPKSRLLYNIKEHLFYNTAFAFCVSMVHYLTPQHIIDDLHVSPIPHSIMSGALGLLLVFRTNAAYNRFWEARQ 88
BLAST of NO03G00770 vs. NCBI_GenBank
Match: KOO29552.1 (membrane protein [Chrysochromulina sp. CCMP291]) HSP 1 Score: 87.8 bits (216), Expect = 4.700e-14 Identity = 50/115 (43.48%), Postives = 68/115 (59.13%), Query Frame = 0
Query: 97 HVVTAATSLPTRRTHTRARGDATFLLDPPQRYQSSDWVENLQSLLDSRIAKRISGHLWFNTAWAGAVTALFEFMPQWHIDAYISPLPHQLMSSALGLLLVFRTNAAYDRFWEARK 212
H+ +ATS+ R + + + QRY ++DW +N+++L S + KRI+ L FN T + P + + IS LPH L+ SALGLLLVFRTNAAYDRFWEARK
Sbjct: 23 HLAPSATSIAARAGCVSCKFSPAY--ETTQRYAAADWAKNIRTLPQSTVLKRIASPLIFNVV---VTTIICAINPIFTVPRLIS-LPHTLLGSALGLLLVFRTNAAYDRFWEARK 131
BLAST of NO03G00770 vs. NCBI_GenBank
Match: CEL96461.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 86.3 bits (212), Expect = 1.400e-13 Identity = 44/78 (56.41%), Postives = 53/78 (67.95%), Query Frame = 0
Query: 134 VENLQSLLDSRIAKRISGHLWFNTAWAGAVTALFEFMPQWHIDAYISPLPHQLMSSALGLLLVFRTNAAYDRFWEARK 212
+E L ++ SRI KRI G L TAW+ +T LF P+ + A S LPH LMS A+GLLLVFRTNAAYDR+WE RK
Sbjct: 58 LECLTTVPLSRILKRIRGFLLVTTAWSVFITTLFAVAPKLSLFALSSSLPHSLMSGAMGLLLVFRTNAAYDRYWEGRK 135
BLAST of NO03G00770 vs. NCBI_GenBank
Match: XP_005709103.1 (hypothetical protein Gasu_03530 [Galdieria sulphuraria] >EME32583.1 hypothetical protein Gasu_03530 [Galdieria sulphuraria]) HSP 1 Score: 82.0 bits (201), Expect = 2.600e-12 Identity = 44/86 (51.16%), Postives = 52/86 (60.47%), Query Frame = 0
Query: 126 QRYQSSDWVENLQSLLDSRIAKRISGHLWFNTAWAGAVTALFEFMPQWHIDAYISPLPHQLMSSALGLLLVFRTNAAYDRFWEARK 212
+RY SSDW L SL S I RI HL+ W V+ L + +P+PH L+ SA+GLLLVFRTNAAYDRFWEARK
Sbjct: 52 ERYTSSDWSRCLLSLPKSIILSRIRSHLF----WTCCVSFLVSLFDHFFKVPPFNPIPHTLLGSAMGLLLVFRTNAAYDRFWEARK 133
BLAST of NO03G00770 vs. NCBI_GenBank
Match: XP_005833734.1 (hypothetical protein GUITHDRAFT_107530 [Guillardia theta CCMP2712] >EKX46754.1 hypothetical protein GUITHDRAFT_107530 [Guillardia theta CCMP2712]) HSP 1 Score: 76.3 bits (186), Expect = 1.400e-10 Identity = 39/85 (45.88%), Postives = 52/85 (61.18%), Query Frame = 0
Query: 127 RYQSSDWVENLQSLLDSRIAKRISGHLWFNTAWAGAVTALFEFMPQWH-IDAYISPLPHQLMSSALGLLLVFRTNAAYDRFWEAR 211
RY S DW+ NL S+ S + R+S HL+ NT +A A+ + MP + A S +PH L ALGLLLVFRTN AY+RF + +
Sbjct: 70 RYASEDWLYNLLSIFSSAMFWRVSSHLFANTLFAVAIWCAYLLMPSLQAVCAGFSTVPHSLTGGALGLLLVFRTNTAYERFLDVK 154 The following BLAST results are available for this feature:
BLAST of NO03G00770 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO03G00770 ID=NO03G00770|Name=NO03G00770|organism=Nannochloropsis oceanica|type=gene|length=833bpback to top protein sequence of NO03G00770.1 >NO03G00770.1-protein ID=NO03G00770.1-protein|Name=NO03G00770.1|organism=Nannochloropsis oceanica|type=polypeptide|length=229bpback to top Synonyms
Publications
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