NO03G00090, NO03G00090 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO03G00090 vs. NCBI_GenBank
Match: XP_009033392.1 (hypothetical protein AURANDRAFT_61213 [Aureococcus anophagefferens] >EGB12347.1 hypothetical protein AURANDRAFT_61213 [Aureococcus anophagefferens]) HSP 1 Score: 137.5 bits (345), Expect = 1.300e-28 Identity = 96/333 (28.83%), Postives = 161/333 (48.35%), Query Frame = 0 Query: 191 FIKKILPQLVVGILLNLVVEWFDLKHTGWWAIRADTQRL-HGFVGAVLAFVLVFRSNASYDRYYEARKTLGLITNQCREAILETCSMFVIKDE--GEHNNLY-------------------RNEIRRKFLVMIAFIRQNIRESHVGFMPNSSESNTPFHEGTNYIRDPIRPRLCDLLTPSEVEGYVNVQPSARAACVASEIKGIAQLLARNVEFSILYYSKISQCLQLSLDAQETLYRIVTTPVPYPYA----WILNVMLVVFIYSVPFLYDSQRGGSYFGM------IILVVAYFGCQRIAQQCENPLEWDACDLDVELLTMSNHDETRDIS 492 F++++ P LV + +NLV+ D H G ++ + + G VGAVL+ +LVFR+N++Y+RYYE +K G++TNQ R+ I+ + ++ G N Y R +RR+ V++ +RQ++RE GF+P + P+++ T +I DP RPRL D+LTP EV Y V AR + + Q LA ++ + ++ +Q LDA ++ RIV TP+P+ Y V + +++ ++ M I+ Y+G +IA + ENP + D D++ H ET I+ Sbjct: 23 FVQQLWPNLVTLVFVNLVINLLD--HLGVKSMPSSQFDITQGLVGAVLSLLLVFRTNSAYERYYEGKKAYGVVTNQVRQIIMNAHAFLAFHEDASGHLNARYQPAAELRERAHEAEVVHELRERVRRQANVLLGVLRQDLREKRCGFVPECALHEVPYNKRT-WILDPSRPRLVDMLTPREVATYGTVSSGARVMLASHSLMDALQRLAPSLAQDRAFTECSTRNIQELLDAFKSCQRIVDTPLPFTYTXXXXXXXXXXXXXXXXXVAYWARTEKRLHWYSMSGILPSIVTAFFYYGVMQIAIEIENPFNFADVDHDLDGFADKLHSETLAIA 352
BLAST of NO03G00090 vs. NCBI_GenBank
Match: XP_005856043.1 (membrane protein, partial [Nannochloropsis gaditana CCMP526] >EKU20316.1 membrane protein, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 111.7 bits (278), Expect = 7.400e-21 Identity = 62/176 (35.23%), Postives = 94/176 (53.41%), Query Frame = 0 Query: 230 HGFVGAVLAFVLVFRSNASYDRYYEARKTLGLITNQCREAILE----------------TCSMFVIKDEGEHNNLYRNEIRRKFLVMIAFIRQNIRESHVGFMPNSSESNTPFHEGTNYIRDPIRPRLCDLLTPSEVEGYVNVQPSARAACVASEIKGIAQLLARNVEFSILYYSK 390 HGF+G++L F + FR+NA+YDRYYE RK L +I R + + +CS + D+ + +++RR+ ++ AFIRQ++RES GF PNS F T Y+ DP P L DLL+ E E Y + P AR V++EI I Q+L+ + ++ + K Sbjct: 119 HGFIGSILGFSIAFRTNAAYDRYYEGRKILSIILENSRSILRDVYSFLLKAPAFPSPTSSCSSLPVPDDAA-VLVISSDLRRRLNILFAFIRQSVRESLSGFSPNSDMGTVSFSNSTFYL-DPSLPHLLDLLSKEEAERYAALSPRARPGAVSAEINIILQILSTRMLYADAFLCK 292
BLAST of NO03G00090 vs. NCBI_GenBank
Match: XP_003058502.1 (membrane protein [Micromonas pusilla CCMP1545] >EEH56957.1 membrane protein [Micromonas pusilla CCMP1545]) HSP 1 Score: 101.7 bits (252), Expect = 7.700e-18 Identity = 89/339 (26.25%), Postives = 150/339 (44.25%), Query Frame = 0 Query: 167 ELAKQNFSFLRIIFCGRNGMGSFWFIKKILPQLVVGILLNLVVEW---FDLKHTGWWAIRADTQ---RLHGFVGAVLAFVLVFRSNASYDRYYEARKTLGLITNQCREAILETCSMFVIKDE--------------------GEHNNLY--------RNEIRRKFLVMIAFIRQNIRESHVGFMPNSSESNTPFHEGTNYIRDPI-RPRLCDLLTPSEVEGYVNVQPSARAACVASEIKGIAQLLARNVEFSILYYSKISQCLQLSLDAQETLYRIVTTPVPYPYAWILNVMLVVFIYSVPFLYDSQ-RGGSYFGMIILVVAYFGCQRIAQQCENPLEW 470 EL+ F IF RN + + +LPQ+ V ++L L W F + A +T H V L F+LVFR++ +YDRYYE +++LG + + R L C + ++ G+ + R E+ R ++ A +R +R+ VG E P + + DP +P L DLL P E + + + PS R VA ++ I + R S +I Q L+L L A + + RIV+TP+P+ Y +L +L F++S PF++ + R ++ I+ V ++G + + ++P W Sbjct: 558 ELSAHWTGFFSEIFTWRNTV-----MPSLLPQICVAVILGLFANWLKGFYCDPSVVAAAECETTFDITGHQVVSVSLGFLLVFRTDWAYDRYYEGKQSLGHLYSGLRN--LNVCFVNYLRANKPGEKPASELDGALRGVGRTGDEQDAAAARRIEEDRTELLRLTNILYATMRHILRDLRVG-----GEDGEPMTDEECVMSDPTGKPPLPDLLKPGEAKTLLAMMPSNRCNWVAMRVQMIVETHRRLGNISERAAFEIYQQLELCLGAYKAMERIVSTPIPFTYLHMLQFILFFFVFSAPFVFATTFRWIAWLPSAIVAVGFYGINEMGKLIQDPFNW 884
BLAST of NO03G00090 vs. NCBI_GenBank
Match: XP_007511540.1 (membrane protein [Bathycoccus prasinos] >CCO17661.1 membrane protein [Bathycoccus prasinos]) HSP 1 Score: 100.9 bits (250), Expect = 1.300e-17 Identity = 103/401 (25.69%), Postives = 165/401 (41.15%), Query Frame = 0 Query: 130 AMDQEEGRGMQTGGLLADPTQASS---AKHTEIPTVRYSSELAK-QNFSFLRIIFCGRNGM--GSFWFIKKILPQLVVGILLNLVVEWFDLKHTGWWAIR------ADTQRLHGFVGAVLAFVLVFRSNASYDRYYEARKTLGLITNQCREAILETCSMFVIKDEGE---HNNLY------------RNEIRRKFLVMIAFIRQNIRESHVGFMPNSSESNTPFHEGTNYIRDPI-RPRLCDLLTPSEVEGYVNVQPSARAACVASEIKGIAQLLARNVEFS----ILYYSKISQCLQLSLDAQETLYRIVTTPVPYPYAWILNVMLVVFIYSVPFLYDSQRGG-SYFGMIILVVAYFGCQRIAQQCENPLEWDACDLDVELLTMSNHDETRDISNFTHSL 498 ++D++EG + L D Q S TEI + S + + + SF +F N + G W P + G+L L + +K G A + H G V+ F L FR++ SY RYYEA+K +G + R + + GE + Y R+E+RR M FIR RE+ G +T DP P L +LT SE + PS+R A V ++ + + + + + S Y ++ CL A L RI T +P+ Y +LN L F+YS PF++ + G S +++ +A++G +A+ ENP ++D D+E ++ E+R T L Sbjct: 938 SVDRKEGLRRVSEKLFNDIAQKESFAGIASTEIHDISTSVQRRRLTSMSFFTDLFAWNNTVLPGILW------PTIFAGLLAGL-ANYTKVKQCGKNVTSHQDCAFAFSDTAHSVCGGVIGFTLCFRASISYYRYYEAKKFMGALCEGARNFACGSLAFLRPDLPGELQYDGDAYKASTAFISSVELRDELRRLSNCMFGFIRHIARETRCGVRKVGEVQSTNIDFSQLIREDPRGNPSLAVILTESEKDFMCGKLPSSRPALVVAKCQKLVEEARKRNDISERGAFDLYDDLNDCLV----ACNNLERISETKMPWIYLHLLNFALFAFVYSAPFIFTAGFGWLSPAPAMLIAIAFYGTAEVARNMENPFDYDTDGHDIEAAGFAHFKESRTFREVTFDL 1327
BLAST of NO03G00090 vs. NCBI_GenBank
Match: XP_002501798.1 (membrane protein [Micromonas commoda] >ACO63056.1 membrane protein [Micromonas commoda]) HSP 1 Score: 91.7 bits (226), Expect = 7.900e-15 Identity = 88/351 (25.07%), Postives = 149/351 (42.45%), Query Frame = 0 Query: 167 ELAKQNFSFLRIIFCGRNGMGSFWFIKKILPQLVVGILLNLVVEWFDLKHTGWWAIRADTQRL------HGFVGAVLAFVLVFRSNASYDRYYEARKTLGLITNQCREAILETCSMFVIKDE--GEH--------NNLY-------------------------------RNEIRRKFLVMIAFIRQNIRESHVGFMPNSSESNTPFHEGTNYIRDPIRPRLCDLLTPSEVEGYVNVQPSARAACVASEIKGIAQLLARNVEFSILYYSKISQCLQLSLDAQETLYRIVTTPVPYPYAWILNVMLVVFIYSVPFLYDSQ-RGGSYFGMIILVVAYFGCQRIAQQCENPLEW 470 EL+ FL IF +N + + +LPQ+ + L + + F G + A + H V L F+LVFR++ +YDRYYE +++LG + N R L C + +++ GE +NL R E+ R V+ A +R +R+ VG P+ E E + +P L DLL E E + + PS R +A I+ I + R S +I Q L++ L A + + RIV+TP+P+ Y +L +L F++S PF++ + Y +I+ + ++G + + ++P W Sbjct: 594 ELSTHWSGFLTEIFVFKNTV-----MPSLLPQIALAFFLGIFAQMFKRVMCGADVVAAAECQTTFDITGHQVVSVSLGFLLVFRTDWAYDRYYEGKQSLGQLYNGLRN--LNVCFVNYLRENKPGERAAFEASGSSNLEGWGDAGPHLTDSPSRAPRESFQSTIAKITEDRAELLRLTNVLYATMRHILRDIRVG-APDGGEVT---DEDCVKVDATGKPPLPDLLREGESERLLALMPSNRCNWIAMRIQIITETHRRLGNISERAAFEIYQQLEICLSAYKAMERIVSTPIPFTYLHMLQFILFFFVFSAPFVFTTTFHWIGYVPSVIVAIGFYGINEMGKLIQDPFNW 933
BLAST of NO03G00090 vs. NCBI_GenBank
Match: EWM20641.1 (Bestrophin/UPF0187 [Nannochloropsis gaditana]) HSP 1 Score: 83.2 bits (204), Expect = 2.800e-12 Identity = 49/162 (30.25%), Postives = 90/162 (55.56%), Query Frame = 0 Query: 324 TPFHEGTNYIRDPIRPRLCDLLTPSEVEGYVNVQPSARAACVASEIKGIA-QLLARNVEFSILYYSKISQCLQLSLDAQETLYRIVTTPVPYPYAWILNVMLVVFIYSVPFLYDS------QRGGSYFGMIILVVAYFGCQRIAQQCENPLEWDACDLDVEL 479 T F++ T ++ DP RPRL DLLT EV+ + + ++R + +E+ +A ++L + E SI I Q L + R+ +P+PY ++N++ +F++ PF+Y S + F ++L VA++G + +A++C++PL WD D D+E+ Sbjct: 5 TKFNKDT-FVLDPTRPRLVDLLTEEEVQQFRRMPVNSRPVYLITEMNLLAYRILGLSKETSIRI--NIDNKFQEVLAGWNGMLRVENLRIPFPYTHVVNLLTFIFVFGAPFIYTSRTQNWAENDVLLFASLLLGVAFYGLEDMARKCQHPLGWDLEDHDLEI 163
BLAST of NO03G00090 vs. NCBI_GenBank
Match: APR82500.1 (Putative membrane protein [Minicystis rosea]) HSP 1 Score: 82.4 bits (202), Expect = 4.800e-12 Identity = 70/261 (26.82%), Postives = 114/261 (43.68%), Query Frame = 0 Query: 230 HGFVGAVLAFVLVFRSNASYDRYYEARKTLGLITNQCREAILETCSMFVIKDEGEHNNLYRNEIRRKFLVMIAFIRQNIRESHVGFMPNSSESNTPFHEGTNYIRDP--IRPRLCDLLTPSEVEGYVNVQPSARAACVASEIKGIAQLLARNVEFSILYYSKISQCLQLSLDAQETLYRIVTTPVPYPYAWILNVMLVVFIYSVPF-LYDSQRGGSYFGMIILVVAYFGCQRIAQQCENPLEWDACDLDVELLTMSNHDET 488 H +G L +LVFR+NASYDR++E R+ G I N+ R+ + +T + I+ + E R EIRR L+ +RQ +R N E + +P +RP L + E + ARA ++ + QL+ +N+ + Y+ RI+ TPVP+ YA + L +F S PF + +S + + +L FG I + E+P D DL ++ + D+T Sbjct: 54 HTLLGVALGLLLVFRTNASYDRFWEGRRLFGSIINRSRDILRQTLQL--IEGDSEEVMRSRREIRRFVLMYYGLLRQYLRAER-----NLDEVGVELTDAERAALEPAAVRPNLAVVWMTDEFVKH------ARAGRLSEQ---RLQLIDQNLTALVDYWGGCE--------------RIMRTPVPFAYAQHIKSFLTLFCLSAPFAMVESMKWYTPIAAGVLAYGMFGIDEIGVEIEDPFGDDPNDLPIDAMGKRIADDT 284
BLAST of NO03G00090 vs. NCBI_GenBank
Match: SKA40448.1 (putative membrane protein [Chitinophaga eiseniae]) HSP 1 Score: 81.6 bits (200), Expect = 8.200e-12 Identity = 68/303 (22.44%), Postives = 135/303 (44.55%), Query Frame = 0 Query: 192 IKKILPQLVVGILLNLVVEWFDLKHTGWWAIRADTQ-----RLHGFVGAVLAFVLVFRSNASYDRYYEARKTLGLITNQCREAILETCSMFVIKDEGEHNNLYRNEIRRKFLVMI---AF-IRQNIRESHVGFMPNSSESNTPFHEGTNYIRDPIRPRLCDLLTPSEVEGYVNVQPSARAACVASEIKGIAQLLARNVEFSILYYSKISQCLQLSLDAQETLYRIVTTPVPYPYAWILNVMLVVFIYSVPFLYDSQRGGSYFGMIILV-VAYFGCQRIAQQCENPLEWDACDLDVELLTMSNH 485 ++K+ P + + + +V W +L +W + A+++ +HG +G V++ +LVFR+N +YDR++E R+ G + N CR ++ +M + E R F VMI AF ++ ++R+ + + P + + ++ + + R+ + + EG + QL+ N E LQ + RI +TP+P+ Y+ + + +I ++PF Y G M++ + + IA++ E+P +DA DL + T+SN+ Sbjct: 45 VRKLFPMFIALSIYSAIVAWLEL---SFWKLSANSEVKNISLMHGLLGFVISLLLVFRTNTAYDRWWEGRRQWGTLVNSCRNLAIKLQAMLPAGN---------TEARAFFRVMIPNYAFGLKNHLRKLYKAEEMEALPEGQPPLDLSKHVPNQLATRILQKIADLQREGQLTGD----------------QLIVLNNE------------LQSFTEVCGACERIQSTPIPFSYSVFIKKFIFFYIMTMPFGYVFSLGYLIIPMVVFIFFVLASLELIAEEIEDPFGFDANDLPTD--TISNN 305
BLAST of NO03G00090 vs. NCBI_GenBank
Match: WP_078672359.1 (hypothetical protein [Chitinophaga eiseniae]) HSP 1 Score: 81.6 bits (200), Expect = 8.200e-12 Identity = 68/303 (22.44%), Postives = 135/303 (44.55%), Query Frame = 0 Query: 192 IKKILPQLVVGILLNLVVEWFDLKHTGWWAIRADTQ-----RLHGFVGAVLAFVLVFRSNASYDRYYEARKTLGLITNQCREAILETCSMFVIKDEGEHNNLYRNEIRRKFLVMI---AF-IRQNIRESHVGFMPNSSESNTPFHEGTNYIRDPIRPRLCDLLTPSEVEGYVNVQPSARAACVASEIKGIAQLLARNVEFSILYYSKISQCLQLSLDAQETLYRIVTTPVPYPYAWILNVMLVVFIYSVPFLYDSQRGGSYFGMIILV-VAYFGCQRIAQQCENPLEWDACDLDVELLTMSNH 485 ++K+ P + + + +V W +L +W + A+++ +HG +G V++ +LVFR+N +YDR++E R+ G + N CR ++ +M + E R F VMI AF ++ ++R+ + + P + + ++ + + R+ + + EG + QL+ N E LQ + RI +TP+P+ Y+ + + +I ++PF Y G M++ + + IA++ E+P +DA DL + T+SN+ Sbjct: 22 VRKLFPMFIALSIYSAIVAWLEL---SFWKLSANSEVKNISLMHGLLGFVISLLLVFRTNTAYDRWWEGRRQWGTLVNSCRNLAIKLQAMLPAGN---------TEARAFFRVMIPNYAFGLKNHLRKLYKAEEMEALPEGQPPLDLSKHVPNQLATRILQKIADLQREGQLTGD----------------QLIVLNNE------------LQSFTEVCGACERIQSTPIPFSYSVFIKKFIFFYIMTMPFGYVFSLGYLIIPMVVFIFFVLASLELIAEEIEDPFGFDANDLPTD--TISNN 282
BLAST of NO03G00090 vs. NCBI_GenBank
Match: WP_090390641.1 (hypothetical protein [Niabella drilacis] >SDD21864.1 putative membrane protein [Niabella drilacis]) HSP 1 Score: 80.9 bits (198), Expect = 1.400e-11 Identity = 72/296 (24.32%), Postives = 126/296 (42.57%), Query Frame = 0 Query: 193 KKILPQLVVGILLN-----LVVEWFDLKHTGWWAIRADTQRLHGFVGAVLAFVLVFRSNASYDRYYEARKTLGLITNQCREAILETCSMFVIKDEGEHNNLYRNEIRRKFLVMIAFIRQNIRESHVGFMPNSS---ESNTPFHEGTNYIRDPIRPRLCDLLTPSEVEGYVNVQPSARAACVASEIKGIAQLLARNVEFSILYYSKISQCLQLSLDAQETLYRIVTTPVPYPYAWILNVMLVVFIYSVPFLYDSQRGGSYFGMIILVVAYF---GCQRIAQQCENPLEWDACDLDVE 478 +K+ P L++ LL+ L +E+ L W + +H +G L+ +LVFR+N +YDR++EAR+ G +TN CR ++ F+ K++ + +R I + F+R + + FM + + E + G N + I + L ++ G QL+ N E LQ D RI TP+PY Y+ + +VV+++++P + G YF + + ++ + IA+ ENP DA DL +E Sbjct: 23 RKLFPYLILMALLSWGIAYLELEFLKLSEKSW---LKNINMVHNLLGFALSLLLVFRTNTAYDRWWEARRQWGTLTNVCRLMAIK-LDAFLPKEDKASRHFFRKSIPLFSQTLFGFLRSD----YTTFMLDKAAHPELDLEKKHGPNQVASMIVRYVTGLYREGKISG--------------------DQLIVLNNE------------LQSLTDVAGACERIKNTPIPYSYSSFIKKFIVVYVFTLPVGFVFSMG--YFVVAAVPFIFYVLASLELIAESIENPFGTDADDLPLE 276 The following BLAST results are available for this feature:
BLAST of NO03G00090 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO03G00090 ID=NO03G00090|Name=NO03G00090|organism=Nannochloropsis oceanica|type=gene|length=1671bpback to top protein sequence of NO03G00090.1 >NO03G00090.1-protein ID=NO03G00090.1-protein|Name=NO03G00090.1|organism=Nannochloropsis oceanica|type=polypeptide|length=557bpback to top Synonyms
Publications
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