NO03G00030, NO03G00030 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO03G00030 vs. NCBI_GenBank
Match: EWM29974.1 (hypothetical protein Naga_100383g2 [Nannochloropsis gaditana]) HSP 1 Score: 253.8 bits (647), Expect = 7.000e-64 Identity = 147/334 (44.01%), Postives = 199/334 (59.58%), Query Frame = 0 Query: 1 MGWWRDLFRRSSSSRRGILNFGSADIQQQPSPPSQPLQQQLPPLQLEEGGRSFLLPPPHITFSTHPMPNDISSKKNENDEDVVLERDDIN-------EDEHFPSPV-------SFSVSSSVHSVVDGINERLHHLPKWQYRLLCGSLWLILFLFVILLTVSIIYGFGLKNVHFSVTGVTPLVSTLADTQGNVPLRTTLSLDNPNIFPITASPTTTTISYIDRTNETRTLYPLVRAPVPRIYLHSHEEGHIIYSDLIFKNLGKLPGGPELMTAVLKGNATFLDFTTTLRLRVKALGFVPIVRVFQVDCYISILWGEPTRRDGSKETISDCMGTFL 321 M WW L SS RR + S Q+Q SP S + +P L+E G PP + + ++ S E D++ R++I+ E E + SFS + SVHSV+ I RLHHLP+W+YR LC SL L + L +LL VSI+YGFGLK VH SVTG TPL L D +GN P+R T+SLDNPN FPITAS + +SY++RT+ + PL AP+PRI LH+ + ++ +D + +L P G +M AVL+G ATFL+ TLRL V+ALGF+ IVR F++DC ++ LWGEPT+ DGSK+T+SDC G F+ Sbjct: 1 MRWWHRLLTYLSSRRRDTTSHCSYMTQEQ-SPLSPSI--SIPAFVLQERGILSPAKPPPLESQSMNF-DERKSNYEECDKETSETREEISDGTLSSVEGEQAQNSTGVPLRAPSFSTTQSVHSVMSDIRSRLHHLPRWKYRFLCASLLLAVILLGLLLCVSIVYGFGLKYVHLSVTGTTPLAPNLVDAEGNAPMRATISLDNPNSFPITASASEVVLSYMNRTDGGQQYTPLASAPLPRIQLHARHKDCMLTTDFVLAHLPTKPEGKAIMGAVLQGRATFLNAAATLRLHVRALGFIRIVRRFEIDCSVATLWGEPTKADGSKDTVSDCFGAFV 330
BLAST of NO03G00030 vs. NCBI_GenBank
Match: EWM26903.1 (hypothetical protein Naga_100103g11 [Nannochloropsis gaditana]) HSP 1 Score: 126.3 bits (316), Expect = 1.700e-25 Identity = 81/255 (31.76%), Postives = 132/255 (51.76%), Query Frame = 0 Query: 67 MPNDISSKKNENDEDVVLERDDINEDEHFPSPVSF--SVSSSVHSVVDGINERLHHLPKWQYRLLCGSLWLILFLFVILLTVSIIYGFGLKNVHFSVTGVTPLVSTLADTQGNVPLRTTLSLDNPNIFPITASPTTTTISYIDRTNETRTLYPLVRAPVPRIYLHSHEEGHIIYSDLIFKNLGKLPGGPELMTAVLKGNATFLDFTTTLRLRVKALGFVPIVRVFQVDCYISILWGEPTRRDGSKETISDCMGTF 320 + ++ ++ E V E++ E + +S S+ SSV S+V I L+ +PKW+YRL+ S+ ++L F++LL VS++YGFG+ H V V ++ D G++P+R+ + ++NPN F I PT ++ Y T +L L + +P LH+ E H S + ++LG + GGP+L AVL G TF L V +LGF+ I R + ++C + WG+ +SDC G F Sbjct: 135 LSENLYQRRGEGGSADVEEKEGTEEPQSVSPSISLLSSLHSSVRSIVGQIGNHLYQMPKWKYRLMVSSIVVLLISFLLLLFVSVVYGFGMSLPHIEVVAVDVVLPLPPD--GSLPVRSLMRVNNPNRFSILVHPTDISV-YSHPTRSPGSL--LGVSTIPEHLLHAREGAHTTESVFVVRDLGSIEGGPDLAEAVLTGGPTFFYTRAKAELTVMSLGFMSIGRAYILECTVLKYWGKDI-------LLSDCYGRF 377
BLAST of NO03G00030 vs. NCBI_GenBank
Match: XP_005853540.1 (hypothetical protein NGA_0432801 [Nannochloropsis gaditana CCMP526] >EKU22819.1 hypothetical protein NGA_0432801 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 124.4 bits (311), Expect = 6.400e-25 Identity = 87/275 (31.64%), Postives = 143/275 (52.00%), Query Frame = 0 Query: 51 RSFLLPPPHITFSTHPMPNDISSKKNENDEDVVLERDDINEDEHFPSPVSFSVSSSVHS----VVDGINERLHHLPKWQYRLLCGSLWLILFLFVILLTVSIIYGFGLKNVHFSVTGV-TPLVSTLADTQGNVPLRTTLSLDNPNIFPITASPTTTTISYIDRTNETRTLYPLVRAPVPR-IYLHSHEEGHIIYSDLIFKNLGKLPGGPELMTAVLKGNATFLDFTTTLRLRVKALGFVPIVRVFQVDCYISILWGEPTRRDGSKETISDCMGTF 320 RSF+ ++ S + + S+++ ++ + D + + +P + SS+HS VV + + LHH+PKWQYRLL ++ ++ V++LTVS++YGF + H VT V L D+ G++P+ +T+ NPN F T+S + I + +R+ L+ PR I L HEEG+ + K++G + GG + AVL+G L T+T ++ VK LG +P R F+V+C + WGE + T+SDC G F Sbjct: 41 RSFIRKKDKLSTSNTSISSSNSTRRCNSEWHSAVSSHDGEDLKPPGTPSQIHLMSSMHSQVVNVVHHVQDYLHHMPKWQYRLLLCTVIILFVSLVLVLTVSVLYGFNMALPHIRVTNVRLALPPPHVDSAGHIPIVSTILFSNPNSFFTTSSLSPIRIYAL----PSRSPESLLALTAPRTIRLAGHEEGYSFDVNFTLKDVGSIDGGNATVAAVLEGQNCLLYTTSTSKITVKGLGLIPTSRNFKVECTVLRKWGE------NPLTLSDCYGRF 305
BLAST of NO03G00030 vs. NCBI_GenBank
Match: XP_005853541.1 (hypothetical protein NGA_0432901 [Nannochloropsis gaditana CCMP526] >EKU22820.1 hypothetical protein NGA_0432901 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 105.1 bits (261), Expect = 4.000e-19 Identity = 86/317 (27.13%), Postives = 136/317 (42.90%), Query Frame = 0 Query: 67 MPNDISSKKNENDEDVVLERDDINEDEHFPSPVSF--SVSSSVHSVVDGINERLHHLPKWQYRLLCGSLWLILFLFVILLTVSIIYGFGLKNVHFSVTGVTPLVSTLADTQGNVPLRTTLSLDNPNIFPITASPT----TTTISYIDRTNETRTLYPLVRAP------------------------------VPRIYLHSHEEGHIIYSDLIFKNLGKL----------------------------PGGPELMTAVLKGNATFLDFTTTLRLRVKALGFVPIVRVFQVDCYISILWGEPTRRDGSKETISDCMGTF 320 + ++ ++ E V E++ E + +S S+ SSV S+V I L+ +PKW+YRL+ S+ ++L F++LL VS++YGFG+ H V V ++ D G++P+R+ + ++NPN F I SP + T+S + R R L P VR P +P LH+ E H S + ++LG + GGP+L AVL G TF L V +LGF+ I R + ++C + WG+ +SDC G F Sbjct: 104 LSENLYQRRGEGGSADVEEKEGTEEPQSVSPSISLLSSLHSSVRSIVGQIGNHLYQMPKWKYRLMVSSIVVLLISFLLLLFVSVVYGFGMSLPHIEVVAVDVVLPLPPD--GSLPVRSLMRVNNPNRFSILHSPARNLGSGTLSQLTRFR--RMLAPRVRLPFLVSGQVHPTDISVYSHPTRSPGSLLGVSTIPEHLLHAREGAHTTESVFVVRDLGSIEKSFGLSFRIDGEGRRVDVRFSYLSHPSQGGPDLAEAVLTGGPTFFYTRAKAELTVMSLGFMSIGRAYILECTVLKYWGKDI-------LLSDCYGRF 409
BLAST of NO03G00030 vs. NCBI_GenBank
Match: EWM26900.1 (hypothetical protein Naga_100103g12 [Nannochloropsis gaditana]) HSP 1 Score: 85.5 bits (210), Expect = 3.300e-13 Identity = 65/217 (29.95%), Postives = 112/217 (51.61%), Query Frame = 0 Query: 51 RSFLLPPPHITFSTHPMPNDISSKKNENDEDVVLERDDINEDEHFPSPVSFSVSSSVHS----VVDGINERLHHLPKWQYRLLCGSLWLILFLFVILLTVSIIYGFGLKNVHFSVTGV-TPLVSTLADTQGNVPLRTTLSLDNPNIFPITASPTTTTISYIDRTNETRTLYPLVRAPVPR-IYLHSHEEGHIIYSDLIFKNLGKLPGGPELMTAVLK 262 RSF+ ++ S + + S+++ ++ + D + + +P + SS+HS VV + + LHH+PKWQYRLL ++ ++ V++LTVS++YGF + H VT V L D+ G++P+ +T+ NPN F T+S + I + +R+ L+ PR I L HEEG+ + K++G + GG + AVL+ Sbjct: 41 RSFIRKKDKLSTSNTSISSSNSTRRCNSEWHSAVSSHDGEDLKPPGTPSQIHLMSSMHSQVVNVVHHVQDYLHHMPKWQYRLLLCTVIILFVSLVLVLTVSVLYGFNMALPHIRVTNVRLALPPPHVDSAGHIPIVSTILFSNPNSFFTTSSLSPIRIYAL----PSRSPESLLALTAPRTIRLAGHEEGYSFDVNFTLKDVGSIDGGNATVAAVLE 253
BLAST of NO03G00030 vs. NCBI_GenBank
Match: EWM26904.1 (hypothetical protein Naga_100103g11 [Nannochloropsis gaditana]) HSP 1 Score: 84.0 bits (206), Expect = 9.500e-13 Identity = 56/185 (30.27%), Postives = 98/185 (52.97%), Query Frame = 0 Query: 67 MPNDISSKKNENDEDVVLERDDINEDEHFPSPVSF--SVSSSVHSVVDGINERLHHLPKWQYRLLCGSLWLILFLFVILLTVSIIYGFGLKNVHFSVTGVTPLVSTLADTQGNVPLRTTLSLDNPNIFPITASPTTTTISYIDRTNETRTLYPLVRAPVPRIYLHSHEEGHIIYSDLIFKNLGKL 250 + ++ ++ E V E++ E + +S S+ SSV S+V I L+ +PKW+YRL+ S+ ++L F++LL VS++YGFG+ H V V ++ D G++P+R+ + ++NPN F I PT ++ Y T +L L + +P LH+ E H S + ++LG + Sbjct: 11 LSENLYQRRGEGGSADVEEKEGTEEPQSVSPSISLLSSLHSSVRSIVGQIGNHLYQMPKWKYRLMVSSIVVLLISFLLLLFVSVVYGFGMSLPHIEVVAVDVVLPLPPD--GSLPVRSLMRVNNPNRFSILVHPTDISV-YSHPTRSPGSL--LGVSTIPEHLLHAREGAHTTESVFVVRDLGSI 190
BLAST of NO03G00030 vs. NCBI_GenBank
Match: EWM26901.1 (hypothetical protein Naga_100103g12 [Nannochloropsis gaditana]) HSP 1 Score: 72.4 bits (176), Expect = 2.900e-9 Identity = 50/144 (34.72%), Postives = 78/144 (54.17%), Query Frame = 0 Query: 120 HLPKWQYRLLCGSLWLILFLFVILLTVSIIYGFGLKNVHFSVTGV-TPLVSTLADTQGNVPLRTTLSLDNPNIFPITASPTTTTISYIDRTNETRTLYPLVRAPVPR-IYLHSHEEGHIIYSDLIFKNLGKLPGGPELMTAVLK 262 H PKWQYRLL ++ ++ V++LTVS++YGF + H VT V L D+ G++P+ +T+ NPN F T+S + I + +R+ L+ PR I L HEEG+ + K++G + GG + AVL+ Sbjct: 22 HRPKWQYRLLLCTVIILFVSLVLVLTVSVLYGFNMALPHIRVTNVRLALPPPHVDSAGHIPIVSTILFSNPNSFFTTSSLSPIRIYAL----PSRSPESLLALTAPRTIRLAGHEEGYSFDVNFTLKDVGSIDGGNATVAAVLE 161 The following BLAST results are available for this feature:
BLAST of NO03G00030 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 7
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO03G00030 ID=NO03G00030|Name=NO03G00030|organism=Nannochloropsis oceanica|type=gene|length=963bpback to top protein sequence of NO03G00030.1 >NO03G00030.1-protein ID=NO03G00030.1-protein|Name=NO03G00030.1|organism=Nannochloropsis oceanica|type=polypeptide|length=321bpback to top Synonyms
Publications
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