NO02G05360, NO02G05360 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO02G05360 vs. NCBI_GenBank
Match: EWM30143.1 (trans- -dihydrobenzene- -diol dehydrogenase [Nannochloropsis gaditana]) HSP 1 Score: 191.8 bits (486), Expect = 1.200e-45 Identity = 90/117 (76.92%), Postives = 102/117 (87.18%), Query Frame = 0 Query: 1 MGETPEETTIVGTEGRIKILGPAHCPTKMIVSRKNKGRGNVEDYVFEYALPAPSPAVVEAGGFNYPNSQGFMYEAAAVQRCVEGGRVECPQYSMEETLVVARIMDEVRRQIGVKSVG 118 MGETPEETTIVGTEGRIKILGPAHCPT+M++ RK+KGR NV+ + FEY LPAP PAV GGFNYPNSQGFMYEAAA QRCV G E PQY+MEETL+VA+IMDEVRRQ+GV++VG Sbjct: 292 MGETPEETTIVGTEGRIKILGPAHCPTQMVLYRKHKGRRNVQAFDFEYPLPAPLPAVEATGGFNYPNSQGFMYEAAAAQRCVLAGLGETPQYTMEETLIVAKIMDEVRRQLGVRAVG 408
BLAST of NO02G05360 vs. NCBI_GenBank
Match: OEU17178.1 (NAD(P)-binding protein [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 134.8 bits (338), Expect = 1.800e-28 Identity = 58/118 (49.15%), Postives = 87/118 (73.73%), Query Frame = 0 Query: 3 ETPEETTIVGTEGRIKILGPAHCPTKMIVSRKNKGRGNV-EDYVFEYALPAPSPAVVEAGGFNYPNSQGFMYEAAAVQRCVEGGRVECPQYSMEETLVVARIMDEVRRQIGVKSVGEE 120 ETPEET +VG++GR+KI P HCPT + + K GRGN+ + FEY LP + ++++GG+ YPNS GF+YEAAAV RC+ G+ E PQ+++EET++ R+++E+R Q+GVK+ E+ Sbjct: 244 ETPEETVVVGSKGRMKIGSPGHCPTMLSIDLKADGRGNLGKTLNFEYPLPEDTKEIIDSGGYFYPNSAGFLYEAAAVARCIASGKREAPQFTLEETMLNLRVIEEIRNQLGVKAFDED 361
BLAST of NO02G05360 vs. NCBI_GenBank
Match: CBJ27518.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 131.7 bits (330), Expect = 1.500e-27 Identity = 59/114 (51.75%), Postives = 78/114 (68.42%), Query Frame = 0 Query: 3 ETPEETTIVGTEGRIKILGPAHCPTKMIVSRKNKGRGNVEDYVFEYALPAPSPAVVEAGGFNYPNSQGFMYEAAAVQRCVEGGRVECPQYSMEETLVVARIMDEVRRQIGVKSV 117 ETPEET I+GTEGRIK+L PAHCPT + V+ K GRGN ++ LP P +V +GGFNYPNS GF +EAAA+ +C+ GGR QY+ +E L V +++E R Q+ + SV Sbjct: 241 ETPEETIIIGTEGRIKLLSPAHCPTAIEVTTKAIGRGNTTTIRHDFPLPDPPASVDASGGFNYPNSNGFQFEAAAIHKCIRGGRTSSDQYTPDEMLAVMHVLEECRTQLKIDSV 354
BLAST of NO02G05360 vs. NCBI_GenBank
Match: XP_002177744.1 (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >EEC50558.1 predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 127.1 bits (318), Expect = 3.700e-26 Identity = 58/112 (51.79%), Postives = 79/112 (70.54%), Query Frame = 0 Query: 1 MGETPEETTIVGTEGRIKILGPAHCPTKMIVSRKNKGRGNVEDYV-FEYALPAPSPAVVEAGGFNYPNSQGFMYEAAAVQRCVEGGRVECPQYSMEETLVVARIMDEVRRQI 112 +GE+ EETT+VGT+GR+ I P HCPTK+IVS K+ GR + F++ LP + + AGGF YPNS GF YEAAAV RC+ G+ E PQY++ ET++ I+DEVR+Q+ Sbjct: 263 LGESVEETTVVGTKGRLTIKTPGHCPTKLIVSLKSTGRAAASQTIEFDFPLPKDTDDIKTAGGFVYPNSAGFCYEAAAVARCIASGKTEAPQYTLAETMLEMEILDEVRKQL 374
BLAST of NO02G05360 vs. NCBI_GenBank
Match: XP_009032319.1 (hypothetical protein AURANDRAFT_18834 [Aureococcus anophagefferens] >EGB12661.1 hypothetical protein AURANDRAFT_18834 [Aureococcus anophagefferens]) HSP 1 Score: 121.3 bits (303), Expect = 2.000e-24 Identity = 60/110 (54.55%), Postives = 73/110 (66.36%), Query Frame = 0 Query: 3 ETPEETTIVGTEGRIKILGPAHCPTKMIVSRKNKGRGNVEDYVFEYALPAPS-PAVVEAGG---FNYPNSQGFMYEAAAVQRCVEGGRVECPQYSMEETLVVARIMDEVR 109 ET E TT VG +GR+ +L PAHCPTK+ + K GRGN EYA PAPS P AGG F+YPNS GF YEAAAVQRCV G ECPQY+++ETL+ + D+ + Sbjct: 320 ETAETTTYVGQKGRVVVLPPAHCPTKLRLELKAAGRGNASVSEVEYAFPAPSRPFAPVAGGDACFHYPNSHGFCYEAAAVQRCVNAGLTECPQYTLDETLLALDLADQAK 429
BLAST of NO02G05360 vs. NCBI_GenBank
Match: XP_009522124.1 (hypothetical protein PHYSODRAFT_496155 [Phytophthora sojae] >EGZ19407.1 hypothetical protein PHYSODRAFT_496155 [Phytophthora sojae]) HSP 1 Score: 89.4 bits (220), Expect = 8.500e-15 Identity = 43/113 (38.05%), Postives = 70/113 (61.95%), Query Frame = 0 Query: 1 MGETPEETTIVGTEGRIKILGPAHCPTKMIVSRKNKGRGNVEDYVFEYALPAPSPAVVEAGGFNYPNSQGFMYEAAAVQRCVEGGRVECPQYSMEETLVVARIMDEVRRQIGV 114 + E TI G++GRI+I PAH T+++V++ + G+ ++ ++ P PS ++ A F YP S+ +YEA AV + GR++C +Y +EE+L +A IMDE+R IGV Sbjct: 580 LAELGNSVTITGSKGRIRIPSPAHSATEVVVTQFLED-GSHQETTTKFPWPTPSSSI--ATPFKYPGSEALVYEAEAVTEAIRDGRLQCEEYPLEESLAIAEIMDEIREAIGV 689
BLAST of NO02G05360 vs. NCBI_GenBank
Match: XP_009826693.1 (hypothetical protein H257_04033 [Aphanomyces astaci] >ETV83263.1 hypothetical protein H257_04033 [Aphanomyces astaci]) HSP 1 Score: 89.0 bits (219), Expect = 1.100e-14 Identity = 49/109 (44.95%), Postives = 70/109 (64.22%), Query Frame = 0 Query: 6 EETTIVGTEGRIKILGPAHCPTKMIVSRKNKGRGNVEDYVFEYALPAPSPAVVEAGGFNYPNSQGFMYEAAAVQRCVEGGR-VECPQYSMEETLVVARIMDEVRRQIGV 114 EE TI+G++GR+ I PAH PT++ R ++G G+ E +FE+ALP P+ V A FN+ S G YEAAAV R + R EC +Y + E+L +A +MD +RR +GV Sbjct: 244 EEVTILGSKGRLVIDAPAHTPTRV---RVDRGTGDAE--LFEFALPKPA---VSASAFNFGGSVGLSYEAAAVTRAILHDRATECAEYPLSESLFLAGLMDTIRRDLGV 344
BLAST of NO02G05360 vs. NCBI_GenBank
Match: XP_009826694.1 (hypothetical protein, variant [Aphanomyces astaci] >ETV83264.1 hypothetical protein, variant [Aphanomyces astaci]) HSP 1 Score: 89.0 bits (219), Expect = 1.100e-14 Identity = 49/109 (44.95%), Postives = 70/109 (64.22%), Query Frame = 0 Query: 6 EETTIVGTEGRIKILGPAHCPTKMIVSRKNKGRGNVEDYVFEYALPAPSPAVVEAGGFNYPNSQGFMYEAAAVQRCVEGGR-VECPQYSMEETLVVARIMDEVRRQIGV 114 EE TI+G++GR+ I PAH PT++ R ++G G+ E +FE+ALP P+ V A FN+ S G YEAAAV R + R EC +Y + E+L +A +MD +RR +GV Sbjct: 154 EEVTILGSKGRLVIDAPAHTPTRV---RVDRGTGDAE--LFEFALPKPA---VSASAFNFGGSVGLSYEAAAVTRAILHDRATECAEYPLSESLFLAGLMDTIRRDLGV 254
BLAST of NO02G05360 vs. NCBI_GenBank
Match: XP_021938127.1 (trans-1,2-dihydrobenzene-1,2-diol dehydrogenase-like [Zootermopsis nevadensis] >KDR09314.1 Trans-1,2-dihydrobenzene-1,2-diol dehydrogenase [Zootermopsis nevadensis]) HSP 1 Score: 88.2 bits (217), Expect = 1.900e-14 Identity = 48/111 (43.24%), Postives = 66/111 (59.46%), Query Frame = 0 Query: 5 PEETTIVGTEGRIKILGPAHCPTKMIVSRKNKGRGNVEDYVFEYALP-APSPAVVEAGGFNYPNSQGFMYEAAAVQRCVEGGRVECPQYSMEETLVVARIMDEVRRQIGVK 115 P E IVGT+G +KIL P CPT + K K E+ LP AP P FN+ NS G YEA V+RC++ G +E P+ S EE+L++A++ DE+R+Q+GVK Sbjct: 235 PNEAFIVGTKGIVKILEPFWCPTSITTPEKTK----------EFILPNAPKP-------FNFTNSAGLRYEATEVRRCLKQGLLESPKVSHEESLILAQLEDEIRKQLGVK 328
BLAST of NO02G05360 vs. NCBI_GenBank
Match: XP_019215733.1 (PREDICTED: trans-1,2-dihydrobenzene-1,2-diol dehydrogenase-like [Oreochromis niloticus]) HSP 1 Score: 87.0 bits (214), Expect = 4.200e-14 Identity = 43/109 (39.45%), Postives = 64/109 (58.72%), Query Frame = 0 Query: 5 PEETTIVGTEGRIKILGPAHCPTKMIVSRKNKGRGNVEDYVFEYALPAPSPAVVEAGGFNYPNSQGFMYEAAAVQRCVEGGRVECPQYSMEETLVVARIMDEVRRQIGV 114 P + I GT+G IK+LGP HCPTK++V+ K EY LP P + N+ NS G YEAA V++C+ G E P+ + +++++ IMDE+R+Q+GV Sbjct: 235 PNDAVIAGTKGSIKVLGPMHCPTKLVVNDKET----------EYPLPEPCLPL------NFTNSTGLRYEAAEVRQCLLKGLKESPRMPLADSVLLTEIMDEIRKQVGV 327 The following BLAST results are available for this feature:
BLAST of NO02G05360 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G05360 ID=NO02G05360|Name=NO02G05360|organism=Nannochloropsis oceanica|type=gene|length=360bpback to top protein sequence of NO02G05360.1 >NO02G05360.1-protein ID=NO02G05360.1-protein|Name=NO02G05360.1|organism=Nannochloropsis oceanica|type=polypeptide|length=120bpback to top Synonyms
Publications
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