NO02G04890, NO02G04890 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO02G04890 vs. NCBI_GenBank
Match: EWM30192.1 (ApaG domain protein [Nannochloropsis gaditana]) HSP 1 Score: 248.1 bits (632), Expect = 3.900e-62 Identity = 191/268 (71.27%), Postives = 215/268 (80.22%), Query Frame = 0 Query: 1 MVHVISKDHSRLVKCLYRQLLRDARRVKHSRAPFLFLQERPSRERYSHLWEVTPDHDARLLDAFLPSYLRHELTTCELKSHEMERIVKANFRRFRNLGVAGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEVIDDCMTLTRLMSEQLRLFECTSVTDSFGVRVIATA-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNIRVENRNRKATVQLVGRHWVIQDNEGKESDSVPKGSIG 268 M H ISKDHSRLV CLYR LLRDARRV+HSRAPF+FLQERPSRERYSHLWE+TPD+DA +LD LPSYLRHELTTCELK+ ++ERI+KANFRRFR+LG + XXXXXXXXXXXXXXXXXXXXX D+V+DD M LTR M+EQL LFE TSVT+S+G+RVIATA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX IRVENRNR+A+VQL+GRHW+IQD +G+E+DSVPKGSIG Sbjct: 1 MAHTISKDHSRLVFCLYRLLLRDARRVRHSRAPFVFLQERPSRERYSHLWEITPDYDANVLDNLLPSYLRHELTTCELKAQDLERIIKANFRRFRSLGTS------EESPNPRHQVPLPSGPXXXXXXXXXXXXXXXXXXXXXMRGANITPIPPPTLDQVLDDTMALTRTMAEQLSLFESTSVTESYGIRVIATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIRVENRNRRASVQLMGRHWIIQDEQGRETDSVPKGSIG 262
BLAST of NO02G04890 vs. NCBI_GenBank
Match: XP_005853461.1 (hypothetical protein NGA_0456400, partial [Nannochloropsis gaditana CCMP526] >EKU22898.1 hypothetical protein NGA_0456400, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 246.1 bits (627), Expect = 1.500e-61 Identity = 189/279 (67.74%), Postives = 215/279 (77.06%), Query Frame = 0 Query: 1 MVHVISKDHSRLVKCLYRQLLRDARRVKHSRAPFLFLQERPSRERYSHLWEVTPDHDARLLDAFLPSYLRHELTTCELKSHEMERIVKANFRRFRNLGVAGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEVIDDCMTLTRLMSEQLRLFECTSVTDSFGVRVIATA-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNIRVENRNRKATVQLVGRHWVIQDNEGKESDSVPKGSIGVVGHEPVLRPG 279 M H ISKDHSRLV CLYR LLRDARRV+HSRAPF+FLQERPSRERYSHLWE+TPD+DA +LD LPSYLRHELTTCELK+ ++ERI+KANFRRFR+LG + XXXXXXXXXXXXXXXXX D+V+DD M LTR M+EQL LFE TSVT+S+G+RVIATA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX IRVENRNR+A+VQL+GRHW+IQD +G+E+DSVPKGSI + P+L G Sbjct: 74 MAHTISKDHSRLVFCLYRLLLRDARRVRHSRAPFVFLQERPSRERYSHLWEITPDYDANVLDNLLPSYLRHELTTCELKAQDLERIIKANFRRFRSLGTS------EESPNPKHHVTLPSGPPAXXXXXXXXXXXXXXXXXSRMRGANIMPIPPPTLDQVLDDTMALTRTMAEQLSLFESTSVTESYGIRVIATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIRVENRNRRASVQLMGRHWIIQDEQGRETDSVPKGSIAPL---PILSIG 343
BLAST of NO02G04890 vs. NCBI_GenBank
Match: XP_005819915.1 (hypothetical protein GUITHDRAFT_120886 [Guillardia theta CCMP2712] >EKX32935.1 hypothetical protein GUITHDRAFT_120886 [Guillardia theta CCMP2712]) HSP 1 Score: 87.0 bits (214), Expect = 1.100e-13 Identity = 49/102 (48.04%), Postives = 65/102 (63.73%), Query Frame = 0 Query: 230 IRVENRNRKATVQLVGRHWVIQDNEGKESDSVPKGSIGVVGHEPVLRPGQTIVYMSGAKLPTPYGSMQGSFQMV----KKMGEGNSVPDK-FDARVSPFVLK 327 I ++N + + TVQL+GR W I D G S SVPKG+ GVVG PVL+PGQ Y SG +L T G M GSFQM ++ G+ ++ D+ FDA V+PF L+ Sbjct: 125 ITIDNESEQ-TVQLIGRQWEILDETGAISGSVPKGTHGVVGMTPVLKPGQRFEYHSGVELTTKEGRMSGSFQMAVVGEEQEGDSDNGDDELFDAIVAPFALR 225
BLAST of NO02G04890 vs. NCBI_GenBank
Match: XP_009032893.1 (hypothetical protein AURANDRAFT_8566, partial [Aureococcus anophagefferens] >EGB12296.1 hypothetical protein AURANDRAFT_8566, partial [Aureococcus anophagefferens]) HSP 1 Score: 85.9 bits (211), Expect = 2.600e-13 Identity = 46/96 (47.92%), Postives = 61/96 (63.54%), Query Frame = 0 Query: 230 IRVENRNRKATVQLVGRHWVIQDNEGKESDSVPKGSIGVVGHEPVLRPGQTIVYMSGAKLPTPYGSMQGSFQMVKKMGEGNSVPDKFDARVSPFVL 326 +R++N R TVQL RHWVI D +G E + VPKGS GVVG P L PG Y SG +L P G+++GSF+ V +G+G++ F+A V PF L Sbjct: 6 LRIKN-ERDDTVQLRSRHWVIADEDGAEDEVVPKGSHGVVGQTPTLAPGAEFQYASGTELRGPKGAIRGSFEFV-SVGDGST----FEAEVRPFAL 95
BLAST of NO02G04890 vs. NCBI_GenBank
Match: XP_005648324.1 (hypothetical protein COCSUDRAFT_53459 [Coccomyxa subellipsoidea C-169] >EIE23780.1 hypothetical protein COCSUDRAFT_53459 [Coccomyxa subellipsoidea C-169]) HSP 1 Score: 85.1 bits (209), Expect = 4.400e-13 Identity = 56/168 (33.33%), Postives = 80/168 (47.62%), Query Frame = 0 Query: 159 EVIDDCMTLTRLMSEQLRLFECTSVTDSFGVRVIATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNIRVENRNRKATVQLVGRHWVIQDNEGKESDSVPKGSIGVVGHEPVLRPGQTIVYMSGAKLPTPYGSMQGSFQMVKKMGEGNSVPDKFDARVSPFVLK 327 +++D R+++EQ L +C++V + GV V T RVEN K VQL+GR W+I +EG + VP+GS GVVG P+L PG+ Y S L TP G+M+GS+QMV ++G GN FDA + L+ Sbjct: 101 QLLDTGFDALRVLAEQYTLEQCSAVATTNGVHVEITT----------ACIGSKIPLDLIETPTARPVWTYRCRVENVGEK-KVQLLGRQWLILTSEGLQHAVVPRGSTGVVGCTPILHPGECFQYYSATDLSTPSGTMKGSYQMV-ELGPGNKPNVPFDAVIPTVALR 256
BLAST of NO02G04890 vs. NCBI_GenBank
Match: PRW20169.1 (hypothetical protein C2E21_9247 [Chlorella sorokiniana]) HSP 1 Score: 85.1 bits (209), Expect = 4.400e-13 Identity = 62/166 (37.35%), Postives = 78/166 (46.99%), Query Frame = 0 Query: 161 IDDCMTLTRLMSEQLRLFECTSVTDSFGVRV-IATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNIRVENRNRKATVQLVGRHWVIQDNEGKESDSVPKGSIGVVGHEPVLRPGQTIVYMSGAKLPTPYGSMQGSFQM--VKKMGEGNSVPDKFDARVSPF 324 +D RL+++Q+ L E TS + GV V ++TA IRV N + TVQL+GRHW+I D GK VPKGS GVVG P+++PG Y SG L TP GSM+GSFQM V FDA V+PF Sbjct: 102 LDQAFESLRLLADQVALDEATSSCTTDGVHVEVSTA------HMGSQAELDPLYDDEDDGSPKKHYWTYRIRVSNLGSE-TVQLLGRHWLISDPSGKIVTEVPKGSRGVVGCTPLIKPGDCFQYYSGTDLETPGGSMRGSFQMAVVDPKKPHAQWLRTFDAEVAPF 260
BLAST of NO02G04890 vs. NCBI_GenBank
Match: XP_005844103.1 (hypothetical protein CHLNCDRAFT_139531 [Chlorella variabilis] >EFN52001.1 hypothetical protein CHLNCDRAFT_139531 [Chlorella variabilis]) HSP 1 Score: 83.6 bits (205), Expect = 1.300e-12 Identity = 49/96 (51.04%), Postives = 57/96 (59.38%), Query Frame = 0 Query: 230 IRVENRNRKATVQLVGRHWVIQDNEGKESDSVPKGSIGVVGHEPVLRPGQTIVYMSGAKLPTPYGSMQGSFQM--VKKMGEGNSVPDKFDARVSPF 324 IRV N + TVQL+GRHW+IQD GK V KGS GVVG P+L PG Y SG L P GSM+GSFQM V + + FDA V+PF Sbjct: 158 IRVSNCGEE-TVQLLGRHWIIQDASGKVLTEVAKGSRGVVGCTPLLEPGACFEYYSGTDLDQPCGSMRGSFQMAVVNQRKPQDKWVRTFDALVAPF 252
BLAST of NO02G04890 vs. NCBI_GenBank
Match: GAY02393.1 (Hypothetical protein PINS_010238 [Pythium insidiosum]) HSP 1 Score: 83.6 bits (205), Expect = 1.300e-12 Identity = 51/167 (30.54%), Postives = 80/167 (47.90%), Query Frame = 0 Query: 161 IDDCMTLTRLMSEQLRLFECTSVTDSFGVRVIATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNIRVENRNRKATVQLVGRHWVIQDNEGKESDSVPKGSIGVVGHEPVLRPGQTIVYMSGAKLPTPYGSMQGSFQMVKKMGEGNS-VPDKFDARVSPFVLK 327 +DD + SEQL L EC+S+T + G+R+ AT+ + + N N TVQ+ GR + + G + ++P+ S G+VG+ PVL+PGQT Y SG + +P G + G +V++ + +S D FDA VS F L+ Sbjct: 114 LDDAIAALHEXSEQLMLAECSSITVTNGIRIEATS---------------QFVPTHSNPEQNLYRYTYRVTITNENEXDTVQITGRQYTFESERG-QRXALPRNSPGIVGNTPVLQPGQTFEYASGVDIDSPRGFVTGCLHVVRRGDDTSSDAVDSFDAYVSKFXLR 264
BLAST of NO02G04890 vs. NCBI_GenBank
Match: PSC74841.1 (Co2+ Mg2+ efflux [Micractinium conductrix]) HSP 1 Score: 83.6 bits (205), Expect = 1.300e-12 Identity = 56/168 (33.33%), Postives = 81/168 (48.21%), Query Frame = 0 Query: 158 DEVIDDCMTLTRLMSEQLRLFECTSVTDSFGVRVIATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNIRVENRNRKATVQLVGRHWVIQDNEGKESDSVPKGSIGVVGHEPVLRPGQTIVYMSGAKLPTP-YGSMQGSFQM-VKKMGEGNSVPDKFDARVSPF 324 D+ ID RL+SEQ+++ C+S ++ GV V T +RV N K VQL+GRHW+I++++G+ V +GS GVVG P+++PG+ Y SG + P G+M GSFQM V V KFDA ++PF Sbjct: 99 DDRIDWAFQSLRLLSEQIQMQRCSSSAETEGVHVEVTT------AHVGSQGELDPTFDPDEEGPEKEFYTYRVRVSNCG-KDVVQLLGRHWIIENDKGEVVAEVARGSTGVVGCTPIIKPGECFSYYSGTDVEPPGRGAMHGSFQMAVVDPQRPQQVLRKFDAEIAPF 259
BLAST of NO02G04890 vs. NCBI_GenBank
Match: ACU26431.1 (uncharacterized protein [uncultured bacterium HF186_75m_14K15] >ACU26490.1 uncharacterized protein [uncultured bacterium HF186_25m_13D19]) HSP 1 Score: 83.2 bits (204), Expect = 1.700e-12 Identity = 44/86 (51.16%), Postives = 55/86 (63.95%), Query Frame = 0 Query: 240 TVQLVGRHWVIQDNEGKESDSVPKGSIGVVGHEPVLRPGQTIVYMSGAKLPTPYGSMQGSFQMVKKMGEGNSVPDKFDARVSPFVL 326 TVQLV RHWVI D E K + KG GVVG +P+LRP ++ Y S L TP G+MQG++QM+ K GEG FDA ++PF L Sbjct: 56 TVQLVSRHWVITDGENKVEE--VKGP-GVVGDQPILRPSESYEYTSACPLSTPVGTMQGTYQMISKSGEG------FDAVIAPFTL 132 The following BLAST results are available for this feature:
BLAST of NO02G04890 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G04890 ID=NO02G04890|Name=NO02G04890|organism=Nannochloropsis oceanica|type=gene|length=1391bpback to top protein sequence of NO02G04890.1 >NO02G04890.1-protein ID=NO02G04890.1-protein|Name=NO02G04890.1|organism=Nannochloropsis oceanica|type=polypeptide|length=327bpback to top Synonyms
Publications
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