NO02G04650, NO02G04650 (gene) Nannochloropsis oceanica

Overview
NameNO02G04650
Unique NameNO02G04650
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1063
Alignment locationchr2:1252567..1253629 +

Link to JBrowse

Properties
Property NameValue
DescriptionPhosphatidylinositol N-acetylglucosaminyltransferase, GPI19/PIG-P subunit
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:1252567..1253629 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR013717PIG-P
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0009058biosynthetic process
GO:0006629lipid metabolic process
GO:0006464cellular protein modification process
Homology
[Close]
BLAST of NO02G04650 vs. NCBI_GenBank
Match: XP_008611606.1 (hypothetical protein SDRG_07548 [Saprolegnia diclina VS20] >EQC34734.1 hypothetical protein SDRG_07548 [Saprolegnia diclina VS20])

HSP 1 Score: 105.9 bits (263), Expect = 1.400e-19
Identity = 45/83 (54.22%), Postives = 66/83 (79.52%), Query Frame = 0 
Query:   34 VEAYGFAGWVGTFVVSGLFLLWAYLPEAWLHTWGITYYPNKEWALSIPAFLCMSYMLSGVVYVSLNLLSTAPLSSYETLTDRW 117
            +E YGFAGW+ + VV   +LLWAYLP++ L+ +GI+YYP++ WA+++PA LCMS  +  V+YV++NLLSTAPL SY T+ D++
Sbjct:   45 MEIYGFAGWIASIVVFACYLLWAYLPDSVLNQYGISYYPSRYWAVALPAMLCMSIFMVLVIYVAINLLSTAPLDSYNTIRDKY 127
[Close]
BLAST of NO02G04650 vs. NCBI_GenBank
Match: XP_012211878.1 (hypothetical protein SPRG_17146 [Saprolegnia parasitica CBS 223.65] >KDO17412.1 hypothetical protein SPRG_17146 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 105.5 bits (262), Expect = 1.800e-19
Identity = 44/83 (53.01%), Postives = 66/83 (79.52%), Query Frame = 0 
Query:   34 VEAYGFAGWVGTFVVSGLFLLWAYLPEAWLHTWGITYYPNKEWALSIPAFLCMSYMLSGVVYVSLNLLSTAPLSSYETLTDRW 117
            +E YGFAGW+ + VV   +LLWAYLP++ L+ +GI+YYP++ WA+++PA LCMS  +  ++YV++NLLSTAPL SY T+ D++
Sbjct:   45 MEIYGFAGWIASIVVFACYLLWAYLPDSVLNQYGISYYPSRYWAVALPAMLCMSIFMVLIIYVAINLLSTAPLDSYNTIRDKY 127
[Close]
BLAST of NO02G04650 vs. NCBI_GenBank
Match: OQS06270.1 (hypothetical protein THRCLA_01681 [Thraustotheca clavata])

HSP 1 Score: 105.5 bits (262), Expect = 1.800e-19
Identity = 44/83 (53.01%), Postives = 66/83 (79.52%), Query Frame = 0 
Query:   34 VEAYGFAGWVGTFVVSGLFLLWAYLPEAWLHTWGITYYPNKEWALSIPAFLCMSYMLSGVVYVSLNLLSTAPLSSYETLTDRW 117
            +E YGFAGW+ + VV   +LLWAYLP+  L+ +GI+YYP++ WA+++PA LCMS ++  ++YV++NLLSTAPL SY T+ D++
Sbjct:   45 MEIYGFAGWIASIVVFACYLLWAYLPDTVLNQYGISYYPSRYWAVALPAMLCMSIVMILIIYVAINLLSTAPLDSYNTIRDKY 127
[Close]
BLAST of NO02G04650 vs. NCBI_GenBank
Match: OQR86774.1 (hypothetical protein ACHHYP_09945 [Achlya hypogyna])

HSP 1 Score: 104.0 bits (258), Expect = 5.100e-19
Identity = 44/83 (53.01%), Postives = 66/83 (79.52%), Query Frame = 0 
Query:   34 VEAYGFAGWVGTFVVSGLFLLWAYLPEAWLHTWGITYYPNKEWALSIPAFLCMSYMLSGVVYVSLNLLSTAPLSSYETLTDRW 117
            +E YGFAGW+ + VV   +LLWAYLP++ L+ +GI+YYP++ WA+++PA LC S ++  V+YV++NLLSTAPL SY T+ D++
Sbjct:   44 MEIYGFAGWIASIVVFACYLLWAYLPDSVLNQYGISYYPSRYWAVALPAMLCTSIVMVLVIYVAINLLSTAPLDSYNTIRDKY 126
[Close]
BLAST of NO02G04650 vs. NCBI_GenBank
Match: XP_012198451.1 (hypothetical protein SPRG_04652 [Saprolegnia parasitica CBS 223.65] >KDO30751.1 hypothetical protein SPRG_04652 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 102.1 bits (253), Expect = 2.000e-18
Identity = 43/79 (54.43%), Postives = 63/79 (79.75%), Query Frame = 0 
Query:   34 VEAYGFAGWVGTFVVSGLFLLWAYLPEAWLHTWGITYYPNKEWALSIPAFLCMSYMLSGVVYVSLNLLSTAPLSSYETL 113
            +E YGFAGW+ + VV   +LLWAYLP++ L+ +GI+YYP++ WA+++PA LCMS  +  ++YV++NLLSTAPL SY T+
Sbjct:   45 MEIYGFAGWIASIVVFACYLLWAYLPDSVLNQYGISYYPSRYWAVALPAMLCMSIFMVLIIYVAINLLSTAPLDSYNTI 123
[Close]
BLAST of NO02G04650 vs. NCBI_GenBank
Match: XP_008871485.1 (hypothetical protein H310_07771 [Aphanomyces invadans] >ETV99709.1 hypothetical protein H310_07771 [Aphanomyces invadans])

HSP 1 Score: 98.6 bits (244), Expect = 2.200e-17
Identity = 43/83 (51.81%), Postives = 64/83 (77.11%), Query Frame = 0 
Query:   34 VEAYGFAGWVGTFVVSGLFLLWAYLPEAWLHTWGITYYPNKEWALSIPAFLCMSYMLSGVVYVSLNLLSTAPLSSYETLTDRW 117
            +E YGFAGW+ + VV   +LLWAY+P++ L ++GITYYP++ WAL++PA L M+ M   VVY+++N +STAPL SY T+ D++
Sbjct:   57 MEIYGFAGWIASIVVFVCYLLWAYVPDSILASYGITYYPSRYWALAVPAMLAMTLMALLVVYIAINWVSTAPLDSYNTIRDQY 139
[Close]
BLAST of NO02G04650 vs. NCBI_GenBank
Match: XP_020689658.1 (phosphatidylinositol N-acetylglucosaminyltransferase subunit P-like isoform X1 [Dendrobium catenatum])

HSP 1 Score: 98.6 bits (244), Expect = 2.200e-17
Identity = 49/147 (33.33%), Postives = 75/147 (51.02%), Query Frame = 0 
Query:   35 EAYGFAGWVGTFVVSGLFLLWAYLPEAWLHTWGITYYPNKEWALSIPAFLCMSYMLSGVVYVSLNLLSTAPLSSYETLTDRWARPPPVYVEDGMTSGMKXXXXXXXXXXXXXXXXXXXXXXXXXXVPHFADLDIGVVNDYLYGDKGK 182
            E YGF G + T + + ++L+WAY PE WLH+ GITYYP+K WAL++P F+ ++  L   VY+ LN + T P +S+ T+ D ++R P  +V                                   +   +DLDI  VND ++G+  K
Sbjct:   57 EVYGFVGSITTVIATVIYLVWAYTPEPWLHSLGITYYPSKHWALAVPTFVMVTVALVIAVYIGLNFMVTPPPTSFSTIFDEYSREPSPFV---------------------------PIEGEEQPIEPISDLDISYVNDLMFGEASK 176
[Close]
BLAST of NO02G04650 vs. NCBI_GenBank
Match: XP_009839794.1 (hypothetical protein, variant [Aphanomyces astaci] >ETV70731.1 hypothetical protein, variant [Aphanomyces astaci])

HSP 1 Score: 96.3 bits (238), Expect = 1.100e-16
Identity = 41/83 (49.40%), Postives = 62/83 (74.70%), Query Frame = 0 
Query:   34 VEAYGFAGWVGTFVVSGLFLLWAYLPEAWLHTWGITYYPNKEWALSIPAFLCMSYMLSGVVYVSLNLLSTAPLSSYETLTDRW 117
            +E YGFAGW+ +  +   +LLWAY+P+A L ++GITYYP++ WAL++PA L M+ M   V Y+++N +STAPL SY T+ D++
Sbjct:   59 MEIYGFAGWIASIAIFVCYLLWAYVPDAILASYGITYYPSRYWALAVPAMLVMTLMALVVFYIAINWISTAPLDSYNTIRDQY 141
[Close]
BLAST of NO02G04650 vs. NCBI_GenBank
Match: XP_008871486.1 (hypothetical protein, variant [Aphanomyces invadans] >ETV99710.1 hypothetical protein, variant [Aphanomyces invadans])

HSP 1 Score: 95.5 bits (236), Expect = 1.800e-16
Identity = 42/79 (53.16%), Postives = 61/79 (77.22%), Query Frame = 0 
Query:   34 VEAYGFAGWVGTFVVSGLFLLWAYLPEAWLHTWGITYYPNKEWALSIPAFLCMSYMLSGVVYVSLNLLSTAPLSSYETL 113
            +E YGFAGW+ + VV   +LLWAY+P++ L ++GITYYP++ WAL++PA L M+ M   VVY+++N +STAPL SY T+
Sbjct:   57 MEIYGFAGWIASIVVFVCYLLWAYVPDSILASYGITYYPSRYWALAVPAMLAMTLMALLVVYIAINWVSTAPLDSYNTI 135
[Close]
BLAST of NO02G04650 vs. NCBI_GenBank
Match: XP_020248902.1 (phosphatidylinositol N-acetylglucosaminyltransferase subunit P-like isoform X1 [Asparagus officinalis] >ONK56014.1 uncharacterized protein A4U43_C10F3250 [Asparagus officinalis])

HSP 1 Score: 95.5 bits (236), Expect = 1.800e-16
Identity = 45/90 (50.00%), Postives = 60/90 (66.67%), Query Frame = 0 
Query:   35 EAYGFAGWVGTFVVSGLFLLWAYLPEAWLHTWGITYYPNKEWALSIPAFLCMSYMLSGVVYVSLNLLSTAPLSSYETLTDRWARPPPVYV 125
            E YGF G + T + + ++L+WAY PE WLH+ GITYYPNK WAL+IPAF  +S +L  V Y+ LN + T P +SY T+ D  +R   V V
Sbjct:   59 EVYGFVGSITTVIATVIYLVWAYTPEPWLHSVGITYYPNKYWALAIPAFAMVSVVLGMVFYLGLNFMVTPPPTSYYTMFDEHSRERSVLV 148
The following BLAST results are available for this feature:
BLAST of NO02G04650 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_008611606.11.400e-1954.22hypothetical protein SDRG_07548 [Saprolegnia dicli... [more]
XP_012211878.11.800e-1953.01hypothetical protein SPRG_17146 [Saprolegnia paras... [more]
OQS06270.11.800e-1953.01hypothetical protein THRCLA_01681 [Thraustotheca c... [more]
OQR86774.15.100e-1953.01hypothetical protein ACHHYP_09945 [Achlya hypogyna... [more]
XP_012198451.12.000e-1854.43hypothetical protein SPRG_04652 [Saprolegnia paras... [more]
XP_008871485.12.200e-1751.81hypothetical protein H310_07771 [Aphanomyces invad... [more]
XP_020689658.12.200e-1733.33phosphatidylinositol N-acetylglucosaminyltransfera... [more]
XP_009839794.11.100e-1649.40hypothetical protein, variant [Aphanomyces astaci]... [more]
XP_008871486.11.800e-1653.16hypothetical protein, variant [Aphanomyces invadan... [more]
XP_020248902.11.800e-1650.00phosphatidylinositol N-acetylglucosaminyltransfera... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL016nonsL016Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR032ncniR032Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR000ngnoR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK007142NSK007142Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO02G04650.1NO02G04650.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO02G04650.1NO02G04650.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO02G04650 ID=NO02G04650|Name=NO02G04650|organism=Nannochloropsis oceanica|type=gene|length=1063bp
ATGCCCTTCAACGCCATGGCCCATGTCTCTCTCTACATGCCCGAGGTCAC
GATgtgagtgcatccctgaggctcaaccattcttgaatcatgaaagtcat
accaggtgagcgttatacggaaacaaagagttccattccttagatggccg
tgaggtgaccatctatgggattggactgggtgactggggcaacccatgtc
gagttcctgcgcaggaacctgcgcaagacactagttgtagtatatatata
gtgcttgtccatcttttaggccaatcgaaaagtgcgcttccggtctaata
aatcaccgcaatgcactatcaatgtcctctcacaaaattcgtcacacaca
ggtttgcactggtgggtacctcgcgggcatctcctggagatgaggtccca
cctgcaatcagccaacttgtaggaggcaagcagtgaggaggaaccccacc
atcaaccttcagCCCAGCCCAGCACCCTGTCCTCCGTCCCTCGTCTCTAA
TGAATAGCGTAGAAGCCTATGGGTTTGCGGGTTGGGTTGGCACCTTTGTT
GTTTCCGgtaagtcgtcttggttgggtcgcctccgttccccccacttcca
cgcctactttccctgttttattcccctccctgccacccacttgtccccac
taccagGTCTCTTTCTCCTCTGGGCATATCTTCCGGAGGCATGGCTGCAC
ACATGGGGCATCACCTACTATCCGAACAAAGAGTGGGCCTTGTCGATACC
CGCGTTTCTGTGCATGTCCTATATGCTGTCAGGGGTGGTGTATGTGAGCC
TGAATTTATTGAGTACCGCCCCTCTTTCTTCATACGAGACACTCACGGAT
CGATGGGCACGTCCACCACCCGTATACGTCGAAGATGGTATGACATCAGG
GATGAAGGAGAATAAGAAGGAACGGGATGGAGGAAGTCAGGAGGAGCGGC
AGGTACCGCCACCGCTGCGGCCGCCGCCGCCATCGGTGCCGCACTTTGCT
GACTTGGACATTGGCGTGGTTAATGATTATTTGTACGGGGACAAGGGGAA
AGGGGGAGATTGA
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protein sequence of NO02G04650.1

>NO02G04650.1-protein ID=NO02G04650.1-protein|Name=NO02G04650.1|organism=Nannochloropsis oceanica|type=polypeptide|length=185bp
MPFNAMAHVSLYMPEVTIPAQHPVLRPSSLMNSVEAYGFAGWVGTFVVSG
LFLLWAYLPEAWLHTWGITYYPNKEWALSIPAFLCMSYMLSGVVYVSLNL
LSTAPLSSYETLTDRWARPPPVYVEDGMTSGMKENKKERDGGSQEERQVP
PPLRPPPPSVPHFADLDIGVVNDYLYGDKGKGGD*
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Synonyms
Publications