NO02G04490, NO02G04490 (gene) Nannochloropsis oceanica

Overview
NameNO02G04490
Unique NameNO02G04490
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2624
Alignment locationchr2:1215094..1217717 -

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Properties
Property NameValue
DescriptionS-adenosyl-methyltransferase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:1215094..1217717 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008168methyltransferase activity
GO:0016740transferase activity
Vocabulary: INTERPRO
TermDefinition
IPR029063SAM-dependent_MTases
IPR023397SAM-dep_MeTrfase_MraW_recog
IPR002903RsmH
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Homology
BLAST of NO02G04490 vs. NCBI_GenBank
Match: EWM30272.1 (s-adenosyl-methyltransferase [Nannochloropsis gaditana])

HSP 1 Score: 517.3 bits (1331), Expect = 4.800e-143
Identity = 267/404 (66.09%), Postives = 322/404 (79.70%), Query Frame = 0
Query:   21 GSATFLFPSSSAFSSTSLHISPRISSKQRPPALLS-----RSFSEDNEPSTSALDPTFASEYHAPVMWREVLDHFITDPQGLYLDCTLGGGGHSEAILTRLKQPGGKLIALDQDPDALAFAGKRLKSQEEEGRFRAVRANFRVASEVLVAEGLMTPEAAEGREPGPFAGMLLDLGVSSHQLDEASRGFSFRGDGPLDMRMEGPNIHSXXXXXXXXXXXXXXXXDEIVNTWEVGAISKVLKEYGEEPRAYKLARAIVSARPLTSTGQLKEVIERHTPYTERPKVLARVFQGLRIAVNGEMDALDSILFQSTRLVRPGGRLVVLSYHSLEDRPVKRFLRAGNKDGVVERDFYGHALSTWKVLTRSSMRPQEDEVELNPRARSVSMRVGERTELMEDEVRSRVEAPP 420
            G   FLF ++  F+S SL      SS++RP    S     +S S +   + + +   F+SEYH+PVMWREVL+H +TD +GLYLDCTLGGGGHSEAILTRL++PGGK+IALDQDPDAL FAGKRL+ +   GRF+A+RANFR A++VL++EGL+TPEAA G EPGPF+G+LLDLGVSSHQLD A+RGFSFRGDGPLDMRM+GP                     +IVNTWEVGA+SKVL+ YGEEPRAYK+ARAI S+RPL ST +L+EV+ +  PY ERPKVLARVFQGLRIAVNGE++AL++IL QSTRLVR GGRLVVLSYHSLEDRPVKRFLRAGNK+G VERDFYGH +STW+ + R+S+RP+EDEV +NPRARSVSMRVGERTEL E +VR+RV+A P
Sbjct:    5 GQIGFLFSNTKLFASFSL--CRPFSSRRRPRPCTSDPHVDKSDSIEVHTNENKIASPFSSEYHSPVMWREVLEHLVTDTRGLYLDCTLGGGGHSEAILTRLEEPGGKVIALDQDPDALDFAGKRLEQEVGRGRFKALRANFRAATDVLLSEGLITPEAAAGTEPGPFSGILLDLGVSSHQLDVAARGFSFRGDGPLDMRMQGP--MKPPTSTSSSSPPSALSAGDIVNTWEVGALSKVLRAYGEEPRAYKIARAIESSRPLKSTTELREVVAKCAPYAERPKVLARVFQGLRIAVNGEVEALEAILTQSTRLVRRGGRLVVLSYHSLEDRPVKRFLRAGNKEGRVERDFYGHEVSTWRAVARTSIRPKEDEVSMNPRARSVSMRVGERTELGEAQVRARVDALP 404          
BLAST of NO02G04490 vs. NCBI_GenBank
Match: WP_012845189.1 (16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH [Rhodothermus marinus] >ACY49579.1 S-adenosyl-methyltransferase MraW [Rhodothermus marinus DSM 4252])

HSP 1 Score: 305.8 bits (782), Expect = 2.200e-79
Identity = 165/344 (47.97%), Postives = 213/344 (61.92%), Query Frame = 0
Query:   66 TSALDPTFASEYHAPVMWREVLDHFITDPQGLYLDCTLGGGGHSEAILTRLKQPGGKLIALDQDPDALAFAGKRLKSQEEEGRFRAVRANFRVASEVLVAEGLMTPEAAEGREPGPFAGMLLDLGVSSHQLDEASRGFSFRGDGPLDMRMEGPNIHSXXXXXXXXXXXXXXXXDEIVNTWEVGAISKVLKEYGEEPRAYKLARAIVSARPLTSTGQLKEVIERHTPYTERPKVLARVFQGLRIAVNGEMDALDSILFQSTRLVRPGGRLVVLSYHSLEDRPVKRFLRAGNKDGVVERDFYGHALSTWKVLTRSSMRPQEDEVELNPRARSVSMRVGERTELMED 410
            T A  P + S YH PV+W+ V++  +TDP G Y+D T+GGGGH+ A+L  L  P G++I +D+DP+AL    +RL    E GR + V+ NF     +L   G+               G+LLDLGVSSHQLDEA RGFSF+ +GPLDMRM+  +                    +++  W    +++VL+ YGEEPRA KLARAI  ARP+ +T +L EV+ R     E  K LARVFQ LRIAVN E+ AL+  L  +TR VRPGGRLVVLSYHSLEDR VKRFLR GN  G   RDFYG  ++ W+ LTR ++RP +DEV  NPRARS  +R+ ER    E+
Sbjct:   10 TGAAGP-YGSPYHVPVLWKAVVEGLVTDPAGCYVDATIGGGGHAAALLDAL-APEGRVIGIDRDPEALEAVRRRLSDAIEAGRLQLVQGNFADLEAILDRLGV-----------AQIDGLLLDLGVSSHQLDEALRGFSFQAEGPLDMRMDPTS--------------PGPTAAQLLERWSEYELAEVLRRYGEEPRARKLARAICRARPIRTTAELAEVVRREVSPKEATKTLARVFQALRIAVNDELQALERALEAATRRVRPGGRLVVLSYHSLEDRRVKRFLRYGNLKGEPVRDFYGRLIAPWRPLTRRAIRPSDDEVAANPRARSARLRIAERVAETEN 326          
BLAST of NO02G04490 vs. NCBI_GenBank
Match: WP_014068157.1 (16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH [Rhodothermus marinus] >AEN74609.1 Ribosomal RNA small subunit methyltransferase H [Rhodothermus marinus SG0.5JP17-172])

HSP 1 Score: 305.4 bits (781), Expect = 2.900e-79
Identity = 165/344 (47.97%), Postives = 213/344 (61.92%), Query Frame = 0
Query:   66 TSALDPTFASEYHAPVMWREVLDHFITDPQGLYLDCTLGGGGHSEAILTRLKQPGGKLIALDQDPDALAFAGKRLKSQEEEGRFRAVRANFRVASEVLVAEGLMTPEAAEGREPGPFAGMLLDLGVSSHQLDEASRGFSFRGDGPLDMRMEGPNIHSXXXXXXXXXXXXXXXXDEIVNTWEVGAISKVLKEYGEEPRAYKLARAIVSARPLTSTGQLKEVIERHTPYTERPKVLARVFQGLRIAVNGEMDALDSILFQSTRLVRPGGRLVVLSYHSLEDRPVKRFLRAGNKDGVVERDFYGHALSTWKVLTRSSMRPQEDEVELNPRARSVSMRVGERTELMED 410
            T A  P + S YH PV+W+ V++  +TDP G Y+D T+GGGGH+ A+L  L  P G++I +D+DP+AL    +RL    E GR + V+ NF     +L   G+               G+LLDLGVSSHQLDEA RGFSF+ +GPLDMRM+  +                    +++  W    +++VL+ YGEEPRA KLARAI  ARP+ +T +L EV+ R  P  E  K LARVFQ LRIAVN E+ AL+  L  +TR VRPGGRLVVLSYHSLEDR VKRFLR GN  G   RDFYG  ++ W+ LT  ++RP +DEV  NPRARS  +R+ ER    E+
Sbjct:   10 TGAAGP-YGSPYHVPVLWKAVVEGLVTDPAGCYVDATIGGGGHTAALLDAL-APEGRVIGIDRDPEALDAVRRRLGDAVEAGRLQLVQGNFADLEAILDRLGV-----------AQIDGLLLDLGVSSHQLDEALRGFSFQAEGPLDMRMDPTS--------------PGPTAAQLLERWSEYELAEVLRRYGEEPRARKLARAICRARPIRTTAELAEVVRREVPPKEATKTLARVFQALRIAVNDELQALERALEAATRRVRPGGRLVVLSYHSLEDRRVKRFLRYGNLKGEPVRDFYGRLIAPWRPLTGRAIRPSDDEVAANPRARSARLRIAERVAETEN 326          
BLAST of NO02G04490 vs. NCBI_GenBank
Match: WP_068126129.1 (16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH [Rhodothermaceae bacterium RA] >ARA93738.1 16S rRNA (cytosine(1402)-N(4))-methyltransferase [Rhodothermaceae bacterium RA])

HSP 1 Score: 301.2 bits (770), Expect = 5.400e-78
Identity = 170/367 (46.32%), Postives = 219/367 (59.67%), Query Frame = 0
Query:   59 SEDNEPSTSALDPT-----FASEYHAPVMWREVLDHFITDPQGLYLDCTLGGGGHSEAILTRLKQPGGKLIALDQDPDALAFAGKRLKSQEEEGRFRAVRANFRVASEVLVAEGLMTPEAAEGREPGPFAGMLLDLGVSSHQLDEASRGFSFRGDGPLDMRMEGPNIHSXXXXXXXXXXXXXXXXDEIVNTWEVGAISKVLKEYGEEPRAYKLARAIVSARPLTSTGQLKEVIERHTPYTERPKVLARVFQGLRIAVNGEMDALDSILFQSTRLVRPGGRLVVLSYHSLEDRPVKRFLRAGNKDGVVERDFYGHALSTWKVLTRSSMRPQEDEVELNPRARSVSMRVGERTELMEDEVRSRVEAPPA 421
            ++D +  ++ +DP      +AS YHAPV+   V+D  +TDP G+Y+D TLGGGGH+ A+L RL  P G+++ +DQD  ALA A  RL    E GRF AVR NF     +L   G  T             G+LLDLG+SSHQ+D   RGFS+   GPLDMRM+                       EIVNTWE GA+ ++L+ YG+EPRA ++ARAIV ARPL +T  L  V+    P  E  K LARVFQ LRIAVN E+  L+ +L  + R++RPGGR+ V+SYHSLEDR VKR  R GN  G   RD YG+ L+ W+ LT   + P  +EV  NPRARS  +RV ERTE   D V++   A PA
Sbjct:    3 ADDPDRESAGMDPAPDARPYASGYHAPVLCIPVVDALVTDPAGVYVDATLGGGGHTAALLDRL-APAGRVVGIDQDEAALAAARTRLAPALEAGRFLAVRGNFGDLEALLAEAGFDTVN-----------GLLLDLGISSHQIDVPERGFSYAAAGPLDMRMD---------------RRQRLTAHEIVNTWEAGALRRILQAYGDEPRAAQVARAIVQARPLETTEALAAVVRAAVPTREEVKTLARVFQALRIAVNEELAMLEQVLAAAARVLRPGGRIAVISYHSLEDRRVKRVFRHGNLAGRPVRDLYGNPLTPWRELTHRPVTPPAEEVAANPRARSARLRVAERTEAPPD-VQAHPAAGPA 341          
BLAST of NO02G04490 vs. NCBI_GenBank
Match: GBD00410.1 (Ribosomal RNA small subunit methyltransferase H [bacterium HR18])

HSP 1 Score: 301.2 bits (770), Expect = 5.400e-78
Identity = 161/336 (47.92%), Postives = 212/336 (63.10%), Query Frame = 0
Query:   73 FASEYHAPVMWREVLDHFITDPQGLYLDCTLGGGGHSEAILTRLKQPGGKLIALDQDPDALAFAGKRLKSQEEEGRFRAVRANFRVASEVLVAEGLMTPEAAEGREPGPFAGMLLDLGVSSHQLDEASRGFSFRGDGPLDMRME---GPNIHSXXXXXXXXXXXXXXXXDEIVNTWEVGAISKVLKEYGEEPRAYKLARAIVSARPLTSTGQLKEVIERHTPYTERPKVLARVFQGLRIAVNGEMDALDSILFQSTRLVRPGGRLVVLSYHSLEDRPVKRFLRAGNKDGVVERDFYGHALSTWKVLTRSSMRPQEDEVELNPRARSVSMRVGERTE 406
            + + YH PV+++ V++  +T+P G Y+D T+GGGGH+ A+L  L  P G+LI +D+DP+AL  A  RL     EGR R V+ NF     +L + G+   +           G+LLDLGVSSHQLD+A+RGFSF+ +GPLDMRM+   GP                     +++  W    +++VL+ YGEEPRA KLARAI  ARP+T+T  L E+I R  P  E  K LARVFQ LRIAVN E+ AL+ +L  +TR VRPGGRL V+SYHSLEDR VKRFLR GN +G   RD YG  ++ W+ LTR  +RP  DEV  NPRARS  +R+ ER +
Sbjct:   10 YGTAYHVPVLYKAVVEGLVTNPAGCYVDATIGGGGHAAALLEAL-SPEGRLIGIDRDPEALEAAACRLAQALAEGRLRLVQGNFADLEALLDSLGVELID-----------GLLLDLGVSSHQLDKAARGFSFQAEGPLDMRMDPSKGPT------------------AQQLLMRWSPQELAEVLRRYGEEPRAAKLARAICEARPVTTTAALAEIIRREVPPKEATKTLARVFQALRIAVNDELQALEQVLEAATRRVRPGGRLAVISYHSLEDRRVKRFLRYGNLEGRPVRDVYGQLVAPWRPLTRRPIRPSNDEVAANPRARSARLRLAERMD 315          
BLAST of NO02G04490 vs. NCBI_GenBank
Match: PSQ74914.1 (16S rRNA (cytosine(1402)-N(4))-methyltransferase [Bacteroidetes bacterium QH_9_64_21])

HSP 1 Score: 290.0 bits (741), Expect = 1.300e-74
Identity = 167/366 (45.63%), Postives = 211/366 (57.65%), Query Frame = 0
Query:   54 LSRSFSEDNEPSTSALDP-TFASEYHAPVMWREVLDHFITDPQGLYLDCTLGGGGHSEAILTRLKQPGGKLIALDQDPDALAFAGKRLKSQEEEGRFRAVRANFRVASEVLVAEGLMTPEAAEGREPGPFAGMLLDLGVSSHQLDEASRGFSFRGDGPLDMRMEGPNIHSXXXXXXXXXXXXXXXXDEIVNTWEVGAISKVLKEYGEEPRAYKLARAIVSARPLTSTGQLKEVIERHTPYTERPKVLARVFQGLRIAVNGEMDALDSILFQSTRLVRPGGRLVVLSYHSLEDRPVKRFLRAGNKDGVVERDFYGHALSTWKVLTRSSMRPQEDEVELNPRARSVSMRVGERTELMEDEVRSRVEAP 419
            +S S ++ N P+    DP  +A+EYHAPV+  +V    +TDP G Y+D TLGGGGH+ A+L  L  P G ++ +D+DPDALA A  RL    E+GRFR VR  F    E+L AE  +           P  G+L DLGVSSHQ+D+  RGFSFR +GPLDMRM                       +++VN W    +  VL+ YGEE RA  +A AIV ARPL +T  L EV+E   P  +    L RVFQ LRI VN E+D L++ L Q T  VRPGGR+ V+SYHSLEDR  KRFLR GN +G   RD YG+ ++ W    R  +  +E EVE NPRARS  +RV ER     DE      AP
Sbjct:    1 MSASDAQGNAPAGG--DPLRYATEYHAPVLSHDVQARLVTDPSGRYVDATLGGGGHARALLDVL-DPEGVVLGIDRDPDALATARDRLADAREDGRFRTVRGTFGRVRELLEAEAFV-----------PVDGVLFDLGVSSHQIDDPERGFSFREEGPLDMRMN---------------PERGLTAEQVVNDWSERDLRDVLRRYGEERRAGGIAHAIVEARPLRTTRALAEVVEARVPPPDTVSSLTRVFQALRIVVNAELDELEAALEQVTESVRPGGRIAVISYHSLEDRRAKRFLRYGNFEGEPRRDLYGNLVAPWTERPRGPIEAREAEVEANPRARSARLRVAER----RDEAEMNPPAP 333          
BLAST of NO02G04490 vs. NCBI_GenBank
Match: PSQ74441.1 (16S rRNA (cytosine(1402)-N(4))-methyltransferase [Bacteroidetes bacterium QH_7_64_110])

HSP 1 Score: 288.9 bits (738), Expect = 2.800e-74
Identity = 162/353 (45.89%), Postives = 207/353 (58.64%), Query Frame = 0
Query:   54 LSRSFSEDNEPSTSALDP-TFASEYHAPVMWREVLDHFITDPQGLYLDCTLGGGGHSEAILTRLKQPGGKLIALDQDPDALAFAGKRLKSQEEEGRFRAVRANFRVASEVLVAEGLMTPEAAEGREPGPFAGMLLDLGVSSHQLDEASRGFSFRGDGPLDMRMEGPNIHSXXXXXXXXXXXXXXXXDEIVNTWEVGAISKVLKEYGEEPRAYKLARAIVSARPLTSTGQLKEVIERHTPYTERPKVLARVFQGLRIAVNGEMDALDSILFQSTRLVRPGGRLVVLSYHSLEDRPVKRFLRAGNKDGVVERDFYGHALSTWKVLTRSSMRPQEDEVELNPRARSVSMRVGERTE 406
            +S   S+D+ P+    DP  +A++YHAPV+  +V    +TDP G Y+D TLGGGGH+ A+L  L  P G ++ +D+DP+AL+ A  RL   +E GRFRAV   F    +VL           E  E  P  G+LLDLGVSSHQ+D   RGFSFR +GPLDMRM                        ++VN W    +  VL+EYGEE RA  LA AI  ARPL +T  L EV+E   P  +  K L RVFQ LRI VN E++ L+  L Q T  VRPGGR+ V+SYHSLEDR VKR+LR GN +G   RD YG  ++ W    R  +  QE+EV+ NPRARS  +RV ER +
Sbjct:    1 MSADSSQDDAPTDG--DPLRYATDYHAPVLSHDVQARLVTDPAGRYVDATLGGGGHARALLDAL-DPEGFVLGIDRDPEALSVARDRLADAQEAGRFRAVHGTFGRLRDVL-----------ESEEVVPVDGLLLDLGVSSHQIDAPERGFSFRDEGPLDMRMN---------------PQRGLTAAQVVNEWSERDLRDVLREYGEESRAGTLAHAIAEARPLETTRDLAEVVEAAVPPPDTVKTLTRVFQALRIVVNAELEELERALAQGTERVRPGGRIAVISYHSLEDRRVKRYLRYGNFEGEPRRDLYGTLVAPWTETPRGPIEAQEEEVKANPRARSARLRVAERRD 324          
BLAST of NO02G04490 vs. NCBI_GenBank
Match: WP_103006142.1 (16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH [Salinivenus lutea])

HSP 1 Score: 287.7 bits (735), Expect = 6.200e-74
Identity = 159/348 (45.69%), Postives = 206/348 (59.20%), Query Frame = 0
Query:   59 SEDNEPSTSALDP-TFASEYHAPVMWREVLDHFITDPQGLYLDCTLGGGGHSEAILTRLKQPGGKLIALDQDPDALAFAGKRLKSQEEEGRFRAVRANFRVASEVLVAEGLMTPEAAEGREPGPFAGMLLDLGVSSHQLDEASRGFSFRGDGPLDMRMEGPNIHSXXXXXXXXXXXXXXXXDEIVNTWEVGAISKVLKEYGEEPRAYKLARAIVSARPLTSTGQLKEVIERHTPYTERPKVLARVFQGLRIAVNGEMDALDSILFQSTRLVRPGGRLVVLSYHSLEDRPVKRFLRAGNKDGVVERDFYGHALSTWKVLTRSSMRPQEDEVELNPRARSVSMRVGERTE 406
            SEDN       DP  +A+++HAPV+  +V    +T P G Y+D TLGGGGH+ ++L  L  P   ++ +DQDPDALA A  RL    E GRFRAVR NF     +L AEG +           P  G+LLDLGVSSHQ+D   RGFSF+ DGPLDMRM+                       ++VN W    + + L++YG+E RA ++A AIV ARPL +TG L + +    P  +  K LARVFQ LRI VN E+D L+  L QST +VRPGGR+  +SYHSLEDR VKR+LR GN +G   RD YG+ ++ W    R  +   E+EV  NPRARS  +RV ER +
Sbjct:    6 SEDNASPDG--DPLRYATDFHAPVLSHDVQTRLVTAPGGRYVDATLGGGGHARSLLDAL-GPDAVVLGIDQDPDALATARDRLAEAREAGRFRAVRGNFGDLERLLRAEGFV-----------PVDGILLDLGVSSHQIDAPERGFSFQADGPLDMRMD---------------PRRGLTARQVVNAWPERDLREALRDYGDERRAGRIAHAIVEARPLDTTGDLADTVRGAVPPPDEVKTLARVFQALRIVVNAELDMLERALEQSTAVVRPGGRIAAISYHSLEDRRVKRYLRYGNFEGTPRRDLYGNLVAPWTETPRGPIEAGEEEVAANPRARSARLRVAERQD 324          
BLAST of NO02G04490 vs. NCBI_GenBank
Match: WP_098075855.1 (16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH [Longibacter salinarum] >PEN13263.1 16S rRNA (cytosine(1402)-N(4))-methyltransferase [Longibacter salinarum])

HSP 1 Score: 287.3 bits (734), Expect = 8.100e-74
Identity = 164/344 (47.67%), Postives = 210/344 (61.05%), Query Frame = 0
Query:   65 STSALDP-TFASEYHAPVMWREVLDHFITDPQGLYLDCTLGGGGHSEAILTRLKQPGGKLIALDQDPDALAFAGKRLKSQEEEGRFRAVRANFRVASEVLVAEGLMTPEAAEGREPGPFAGMLLDLGVSSHQLDEASRGFSFRGDGPLDMRME---GPNIHSXXXXXXXXXXXXXXXXDEIVNTWEVGAISKVLKEYGEEPRAYKLARAIVSARPLTSTGQLKEVIERHTPYTERPKVLARVFQGLRIAVNGEMDALDSILFQSTRLVRPGGRLVVLSYHSLEDRPVKRFLRAGNKDGVVERDFYGHALSTWKVLTRSSMRPQEDEVELNPRARSVSMRVGERT 405
            S S  DP  +A+EYHAPV+  EV+D  ITDP G Y+D TLGGGGHSEA+L  L  P G +I +DQD +ALA A  RL  + E GRFR V+ NF     +L   G+   +           G+LLDLGVSSHQ+D   RGFSF+ +GPLDMRM+   G   H                  +IVN W    I+ V+  YG+E R+  +ARAIV ARPL +T  L + +    P  +  K LARVFQGLRIAVN E+D L+ +L QS  ++R GGR+ V+SYHSLEDR VKRFLR GN +G   RD YG  ++ ++   RS++   E EV+ NPRARS  +R+ ERT
Sbjct:   13 SESDADPLKYATEYHAPVLSHEVIDRLITDPSGCYVDATLGGGGHSEALLDAL-APEGVVIGIDQDDEALATARDRLADEIEAGRFRTVQGNFGRLQTLLEEIGIEEID-----------GLLLDLGVSSHQIDVPERGFSFQREGPLDMRMDPRGGLTAH------------------QIVNHWAQRDIADVIYHYGDERRSRPIARAIVDARPLETTHDLADAVRSAVPERDEVKSLARVFQGLRIAVNAELDVLEDVLEQSADVIREGGRIAVISYHSLEDRRVKRFLRYGNFEGKPIRDIYGTLIAPFEESPRSAIEAGEAEVQSNPRARSARLRIAERT 326          
BLAST of NO02G04490 vs. NCBI_GenBank
Match: WP_103019540.1 (16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH [Salinibacter altiplanensis])

HSP 1 Score: 287.3 bits (734), Expect = 8.100e-74
Identity = 157/345 (45.51%), Postives = 205/345 (59.42%), Query Frame = 0
Query:   62 NEPSTSALDP-TFASEYHAPVMWREVLDHFITDPQGLYLDCTLGGGGHSEAILTRLKQPGGKLIALDQDPDALAFAGKRLKSQEEEGRFRAVRANFRVASEVLVAEGLMTPEAAEGREPGPFAGMLLDLGVSSHQLDEASRGFSFRGDGPLDMRMEGPNIHSXXXXXXXXXXXXXXXXDEIVNTWEVGAISKVLKEYGEEPRAYKLARAIVSARPLTSTGQLKEVIERHTPYTERPKVLARVFQGLRIAVNGEMDALDSILFQSTRLVRPGGRLVVLSYHSLEDRPVKRFLRAGNKDGVVERDFYGHALSTWKVLTRSSMRPQEDEVELNPRARSVSMRVGERTE 406
            N+P+     P  +A+++HAPV+  +V    +TDP G Y+D TLGGGGH+ A+L  L  P G ++ +D+DP ALA A  RL  + E GRFRAV   F    +VL AE L            P  G+LLDLGVSSHQ+D   RGFSFR +GPLDMRM+                       +IVN W    +  VL+EYGEE RA ++ARA+  ARPL +T  L  V+E   P  +  K L RVFQ LRIAVN E+D L+ +L Q+T+ +R GGR+ V+SYHSLEDR VKR+LR GN +G   RD YG  ++ W    R  +   + E+E NPRARS  +RV ER +
Sbjct:    8 NDPAPDDEKPLRYATDFHAPVLSHDVQARLVTDPSGCYVDATLGGGGHARALLDEL-GPDGVVLGIDRDPQALAAARDRLADEREAGRFRAVHGTFGNLRDVLTAEAL-----------APIDGLLLDLGVSSHQIDAPERGFSFRDEGPLDMRMD---------------PQRGLTARQIVNDWGERDLHDVLREYGEESRAGRVARALCDARPLDTTRDLAAVVEGCVPPPDTVKTLTRVFQALRIAVNAELDELEDVLEQATKEIRTGGRIAVISYHSLEDRRVKRYLRYGNFEGEPRRDLYGTLVAPWAETPRGPIEASDAEIEANPRARSAHLRVAERRD 325          
The following BLAST results are available for this feature:
BLAST of NO02G04490 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM30272.14.800e-14366.09s-adenosyl-methyltransferase [Nannochloropsis gadi... [more]
WP_012845189.12.200e-7947.9716S rRNA (cytosine(1402)-N(4))-methyltransferase R... [more]
WP_014068157.12.900e-7947.9716S rRNA (cytosine(1402)-N(4))-methyltransferase R... [more]
WP_068126129.15.400e-7846.3216S rRNA (cytosine(1402)-N(4))-methyltransferase R... [more]
GBD00410.15.400e-7847.92Ribosomal RNA small subunit methyltransferase H [b... [more]
PSQ74914.11.300e-7445.6316S rRNA (cytosine(1402)-N(4))-methyltransferase [... [more]
PSQ74441.12.800e-7445.8916S rRNA (cytosine(1402)-N(4))-methyltransferase [... [more]
WP_103006142.16.200e-7445.6916S rRNA (cytosine(1402)-N(4))-methyltransferase R... [more]
WP_098075855.18.100e-7447.6716S rRNA (cytosine(1402)-N(4))-methyltransferase R... [more]
WP_103019540.18.100e-7445.5116S rRNA (cytosine(1402)-N(4))-methyltransferase R... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL016nonsL016Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR032ncniR032Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR000ngnoR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK007119NSK007119Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO02G04490.1NO02G04490.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|624672gene_1041Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100003g25gene439Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO02G04490.1NO02G04490.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO02G04490 ID=NO02G04490|Name=NO02G04490|organism=Nannochloropsis oceanica|type=gene|length=2624bp
ATGCTGCCCCGACGGGCAACGGCTACTCTATCTTTCCCCGGCACGACACG
GAGAGTTTCCGGTTCGGCTACCTTCCTCTTTCCTTCCTCTTCTGCCTTCT
CCTCCACCTCCCTCCACATCTCGCCCCGCATTAGCAGCAAACAGCGTCCT
CCAGCCCTCTTATCCCGATCCTTCTCAGAAGACAATGAGCCCAGCACATC
AGCCCTCGACCCCACTTTTGCAAGTGAATATCATGCCCCAGTCATGTGGC
GAGAGGTTCTTGATCATTTTATCACAGACCCACAAGGCCTTTACTTGGAT
TGTACGTTGGGTGGAGGAGGGCATTCGGAAGCAATTCTCACTCGATTGAA
GCAGCCTGGTGGGAAGCTGATTGCCTTAGATCAAGATCCTGATGCTTTGG
CTTTCGCGGGGAAACGTCTGAAAAGTCAGGAAGAAGAGGGGAGATTTCGG
GCGGTCAGGGCGAATTTCCGTGTGGCGAGTGAAGTACTGGTAGCGGAGGG
GTTGATGACGCCAGAGGCCGCCGAAGGGAGGGAACCAGGGCCATTTGCGG
gtaggagggaggagggagggaggatggaagggggagggatgtaaggaggg
ggataaataaatgttttgaaaaacacttagtgcactcatgtcaacattca
tttttgatagGTATGCTTCTGGATTTGGGCGTTTCCTCGCATCAGCTTGA
TGAAGCTTCGAGGgtacgttatggaaaagtgggattatcgtggttattgt
tatagatgcttacaacctaccccgtccctcctatcttgctttctttcctt
cctcccttccgtgggggctgataatctacagGGGTTTAGCTTCAGGGGTG
ATGGACCACTGGACATGCGCATGGAGgtgagcatcatggaagtgaagtct
tactttaacaagcgttctaccactctattccggatgtttggttgtgtact
tatcttcatatgttcatgcgaggatacttgtctatcaatcttttttctta
tggcatttatatcctttctaggtttccctgtgaatcccttgccctgctgt
ctcattcctagcccgtcttatatgtatcttctccctccaccacattctcc
tctccttcccccagGGCCCCAACATCCACTCCTCCTCCTCCTCCTCCTCC
TCCTTCTCCTCCTCCTCCTCCCTCTCAGCCGACGAAATTGTGAACACTTG
GGAAGTAGGAGCAATATCGAAAGTACTCAAAGAGTACGGAGAGGAGCCGC
GTGCCTATAAATTGGCGCGGGCGATAGTGTCCGCCCGTCCACTCACTTCC
ACGGGACAGTTGAAGGAGGTGATTGAACGACACACGCCTTATACAGgtaa
tcgcaaatccgctgaccaatacactttaaatatgataggtatgagataat
cagccgataaaattccttcactctcctcacaatggacatacagAGAGGCC
TAAAGTCCTGGCACGTGTTTTTCAAGGCCTCCGCATCGCAGTAAACGGCG
AGATGGATGCTCTTGACTCCATCCTCTTCCAATCCACGCGCCTTGTACGA
CCAGGAGGGAGGCTTGTCGTCCTCTCTTACCATTCGCTCGAGGACCGCCC
CGTAAAAAGATTTTTAAGGGCCGGGAATAAAGACGGGGTCGTCGAACGTG
ATTTTTATGGACACGCCCTCAGCACATGGAAAGTACTCACACGCTCCTCC
ATGAGGCCGCAAGAAGATGAAGTTGAGCTCAATCCAAGGGCGAGAAGCGT
GAGTATGAGGGTGGGGGAAAGGACGGAGTTGATGGAGGACGAGGTACGGT
CGAGGGTGGAAGCCCCGCCGGCTGGGAAGGGAAGGGGAGGAGGAGGAGAA
GGAGGAGGAGAAGGAGGAGGGATAAGACCGTTGGGAAGAAAGCAACGCGA
GCGGCAGCGGTTGATGGAGGAGGGGGGGGAGAGGTAGGGAAGTCTTGGAA
ATAAGGAGGCATGGGAAGTCTTGAAAATAAGGAGGCGTGGGAAGTCTTGA
AAATAAGAGGAGAAGCAAATGCACGGGGGAGGGAGGTAAAGTATCGGCTG
GCGAGCTGTAGGGTGATACATACAGCGTATCTGTGGGGGTTAGGGTCAGG
ATGGGAAGGAAGTCAACAGATCGAGTGGAGGGAAAGTGTGAAAGAAGTGG
GAGGTTTTACGCCGGGCTGTGAAGTCAATACAGTGATGTATATACATTTG
AAGTCACTCACGCGCACACGACGTGAATATTGTCTACTACTCTAAACCGA
GACCCTGGTTCACGTTACTTTCCCCTCGGATTGCATAGGGCTTGTCAGTA
TTCCTTCAAGGGAGAGACGCAACTCACTGATATGCGTCTCGGGGCCTGGC
ATGTTCCGACTCGAGCGTCGGAAGAAAGGCTTCTCCGGGTAACCAATGCC
TCCGGACCCACTTTTCCCACAAAGCCAGAGTTATGTGTCTAATGTGTAGT
AAAATACTGTTTAAATACACCACTCTTTCGGCTCCCGAATGTTTGTGGAC
ATGTTGACTCGACGGTTCTGCGTCTCTGGAGGCCAAAAAGGAGGACGATC
TTTTTCAAGGATCGGCATGCCGCCGTGCGGCTGACTCGATTTACCGGTGC
GGTGCACTTCTTACCCACTTAAAA
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protein sequence of NO02G04490.1

>NO02G04490.1-protein ID=NO02G04490.1-protein|Name=NO02G04490.1|organism=Nannochloropsis oceanica|type=polypeptide|length=458bp
MLPRRATATLSFPGTTRRVSGSATFLFPSSSAFSSTSLHISPRISSKQRP
PALLSRSFSEDNEPSTSALDPTFASEYHAPVMWREVLDHFITDPQGLYLD
CTLGGGGHSEAILTRLKQPGGKLIALDQDPDALAFAGKRLKSQEEEGRFR
AVRANFRVASEVLVAEGLMTPEAAEGREPGPFAGMLLDLGVSSHQLDEAS
RGFSFRGDGPLDMRMEGPNIHSSSSSSSSFSSSSSLSADEIVNTWEVGAI
SKVLKEYGEEPRAYKLARAIVSARPLTSTGQLKEVIERHTPYTERPKVLA
RVFQGLRIAVNGEMDALDSILFQSTRLVRPGGRLVVLSYHSLEDRPVKRF
LRAGNKDGVVERDFYGHALSTWKVLTRSSMRPQEDEVELNPRARSVSMRV
GERTELMEDEVRSRVEAPPAGKGRGGGGEGGGEGGGIRPLGRKQRERQRL
MEEGGER*
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Synonyms
Publications