NO02G04230, NO02G04230 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO02G04230 vs. NCBI_GenBank
Match: EWM30357.1 (soluble nsf attachment protein receptor [Nannochloropsis gaditana]) HSP 1 Score: 169.1 bits (427), Expect = 3.600e-38 Identity = 81/109 (74.31%), Postives = 97/109 (88.99%), Query Frame = 0 Query: 1 MVEATKKVGANTVVELKRQTDQIADITDTVDAMENGLTRADKLIRAFGRRIATDKFIQFFFVLNCMLLIGIVTWYAVKKGKIKPPHLNTPPLPTFDEVFGSGGSSDSGT 110 MVEA+K+VGANTV E+ RQ +QIA+ITDTV+AME+GLTRADKLIRAFGRRIATDKFIQFFFVLN LL+GI+ WYAVKKGK++ P ++ PP+PTFDEVFGSGG ++ T Sbjct: 144 MVEASKQVGANTVDEVNRQKEQIAEITDTVEAMEDGLTRADKLIRAFGRRIATDKFIQFFFVLNFGLLVGIIVWYAVKKGKVRAPEIHAPPMPTFDEVFGSGGGDNTST 252
BLAST of NO02G04230 vs. NCBI_GenBank
Match: XP_002289353.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED92890.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 79.0 bits (193), Expect = 4.800e-11 Identity = 39/82 (47.56%), Postives = 59/82 (71.95%), Query Frame = 0 Query: 1 MVEATKKVGANTVVELKRQTDQIADITDTVDAMENGLTRADKLIRAFGRRIATDKFIQFFFVLNCMLLIGIVTWYAVKKGKI 83 MV A+K+VG T+ EL RQ +QI ++ + +E+ L RADKLI+ FG+R+ATD+FIQ F +N +LL+G+V + +KKG + Sbjct: 118 MVAASKEVGEATMEELLRQREQIRNVDNEAMRIEDNLQRADKLIKTFGKRMATDRFIQCFACINILLLVGVVIYTILKKGSL 199
BLAST of NO02G04230 vs. NCBI_GenBank
Match: OEU13643.1 (hypothetical protein FRACYDRAFT_171119 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 76.3 bits (186), Expect = 3.100e-10 Identity = 40/93 (43.01%), Postives = 60/93 (64.52%), Query Frame = 0 Query: 1 MVEATKKVGANTVVELKRQTDQIADITDTVDAMENGLTRADKLIRAFGRRIATDKFIQFFFVLNCMLLIGIVTWYAVKKGKIKPPHLNTPPLP 94 M+ TK+VG T+ EL+RQ D + +I D M + L RA+ L++ FG+R+A+DKFIQ F VLN +L +G+V W A+ KG+ + + P P Sbjct: 144 MIAQTKEVGVATLEELQRQRDVLQNIDKEADRMGDNLARAEALVKQFGKRMASDKFIQCFAVLNVLLFVGVVVW-AIFKGRGGEGNADAPADP 235
BLAST of NO02G04230 vs. NCBI_GenBank
Match: XP_002182485.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC45772.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 74.3 bits (181), Expect = 1.200e-9 Identity = 40/108 (37.04%), Postives = 64/108 (59.26%), Query Frame = 0 Query: 2 VEATKKVGANTVVELKRQTDQIADITDTVDAMENGLTRADKLIRAFGRRIATDKFIQFFFVLNCMLLIGIVTWYAVKKGKIKPPHLNTPPLPTFDEVFGSGGSSDSGT 110 + +K+VG +T+ EL+RQ D I I D +++ L RA+ L++ FG+R+A+D FIQ F ++NC+LL+G+V + +K G + + TP P DSGT Sbjct: 151 ITESKEVGISTLEELERQRDVINSIEKETDRIDDNLARAEVLLKQFGKRMASDHFIQCFALINCLLLLGVVLYAVIKGGGLGLGNSGTPASPV---------DGDSGT 249
BLAST of NO02G04230 vs. NCBI_GenBank
Match: GAX29156.1 (hypothetical protein FisN_7Hh244 [Fistulifera solaris]) HSP 1 Score: 73.6 bits (179), Expect = 2.000e-9 Identity = 37/93 (39.78%), Postives = 60/93 (64.52%), Query Frame = 0 Query: 1 MVEATKKVGANTVVELKRQTDQIADITDTVDAMENGLTRADKLIRAFGRRIATDKFIQFFFVLNCMLLIGIVTWYAVKKGKIKPPHLNTPPLP 94 M+ A+K+VG T+ EL+RQ + I +I D +++ L RA+ LI+ F +R+A+D FIQ F ++NC+LL+ +V + VKKG + + P P Sbjct: 144 MIAASKEVGVATLEELERQRNVIQNIEKETDRLDDNLARAEALIKQFSKRMASDHFIQCFAMINCILLVVVVVYAIVKKGSLTGNDDSAPVAP 236
BLAST of NO02G04230 vs. NCBI_GenBank
Match: GAX16521.1 (hypothetical protein FisN_7Lh244 [Fistulifera solaris]) HSP 1 Score: 71.6 bits (174), Expect = 7.700e-9 Identity = 35/93 (37.63%), Postives = 60/93 (64.52%), Query Frame = 0 Query: 1 MVEATKKVGANTVVELKRQTDQIADITDTVDAMENGLTRADKLIRAFGRRIATDKFIQFFFVLNCMLLIGIVTWYAVKKGKIKPPHLNTPPLP 94 M+ ++K+VG T+ EL+RQ + I +I D +++ L RA+ LI+ F +R+A+D FIQ F ++NC+LL+ +V + +KKG + + P P Sbjct: 144 MIASSKEVGVATLEELERQRNVIQNIEKETDRLDDNLARAEALIKQFSKRMASDHFIQCFAMINCILLVVVVLYAIIKKGSLTGNDDSAPVAP 236
BLAST of NO02G04230 vs. NCBI_GenBank
Match: XP_024574114.1 (Sec20 [Plasmopara halstedii] >CEG37745.1 Sec20 [Plasmopara halstedii]) HSP 1 Score: 68.9 bits (167), Expect = 5.000e-8 Identity = 44/96 (45.83%), Postives = 57/96 (59.38%), Query Frame = 0 Query: 1 MVEATKKVGANTVVELKRQTDQIADITDTVDAMENGLTRADKLIRAFGRRIATDKFIQFFFVLNCMLLIGIVTWYAV--KKGKIKPPHLNTPPLPT 95 MVE +K+V A T L+ Q + I +ITD V +E+ L RADKLIR+F RR+ATD+ I F L + + GIV + AV K P TPP PT Sbjct: 143 MVEQSKEVAAATAEALRSQREHIVEITDAVMGIEDSLQRADKLIRSFARRMATDRVILLFTFLVIVGIAGIVGYKAVNPKDTTFYVPDEVTPPDPT 238
BLAST of NO02G04230 vs. NCBI_GenBank
Match: CCI48608.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 68.6 bits (166), Expect = 6.500e-8 Identity = 45/111 (40.54%), Postives = 64/111 (57.66%), Query Frame = 0 Query: 1 MVEATKKVGANTVVELKRQTDQIADITDTVDAMENGLTRADKLIRAFGRRIATDKFIQFFFVLNCMLLIGIVTWYAV--KKGKIKPPHLNTPPLPTFDEVFGSGGSSDSGT 110 MVEA+K+V T +L+ Q QI ITD V ME+ LTRADKLIR F RR+ATD+ I F +L+ + + IV + ++ K P PP P D ++ + S+ + T Sbjct: 140 MVEASKEVAIATGEQLREQRQQIVQITDEVMRMEDSLTRADKLIRTFARRMATDRVILLFALLSFLGIAAIVVYKSMYPKDKTFAVPDEILPPSP--DTIYNAAISAANNT 248
BLAST of NO02G04230 vs. NCBI_GenBank
Match: XP_009040643.1 (hypothetical protein AURANDRAFT_72457 [Aureococcus anophagefferens] >EGB04729.1 hypothetical protein AURANDRAFT_72457 [Aureococcus anophagefferens]) HSP 1 Score: 65.5 bits (158), Expect = 5.500e-7 Identity = 38/77 (49.35%), Postives = 51/77 (66.23%), Query Frame = 0 Query: 1 MVEATKKVGANTVVELKRQTDQIADITDTVDAMENGLTRADKLIRAFGRRIATDKFIQFFFVLNCMLLIGIVTWYAV 78 +VEA+ +VG + + EL+RQ +Q DIT V +E+ LTRADKLIR F +R+ TDK I F +N LIGIV + V Sbjct: 179 LVEASSEVGHSALNELERQQEQARDITTDVMIIEDNLTRADKLIRNFTKRMMTDKLIVCFAFVNMCGLIGIVVYCVV 255
BLAST of NO02G04230 vs. NCBI_GenBank
Match: XP_009531261.1 (hypothetical protein PHYSODRAFT_249448 [Phytophthora sojae] >EGZ13832.1 hypothetical protein PHYSODRAFT_249448 [Phytophthora sojae]) HSP 1 Score: 65.1 bits (157), Expect = 7.200e-7 Identity = 42/96 (43.75%), Postives = 56/96 (58.33%), Query Frame = 0 Query: 1 MVEATKKVGANTVVELKRQTDQIADITDTVDAMENGLTRADKLIRAFGRRIATDKFIQFFFVLNCMLLIGIVTWYAVKKG--KIKPPHLNTPPLPT 95 MVE +K+V A T L+ Q + I +ITD V +E+ L RADKLIR+F RR+ATD+ I F L + + GIV + +V P TPP PT Sbjct: 142 MVEQSKEVAAATAEVLRGQREHIVEITDAVMGIEDSLQRADKLIRSFARRMATDRVILLFTFLVIVGIAGIVGYKSVHPDDTTFYVPDEVTPPDPT 237 The following BLAST results are available for this feature:
BLAST of NO02G04230 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 11
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G04230 ID=NO02G04230|Name=NO02G04230|organism=Nannochloropsis oceanica|type=gene|length=1815bpback to top protein sequence of NO02G04230.1 >NO02G04230.1-protein ID=NO02G04230.1-protein|Name=NO02G04230.1|organism=Nannochloropsis oceanica|type=polypeptide|length=507bpback to top Synonyms
Publications
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