NO02G03790, NO02G03790 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO02G03790 vs. NCBI_GenBank
Match: CBN78115.1 (flagellar outer dynein arm light chain 2 [Ectocarpus siliculosus]) HSP 1 Score: 142.5 bits (358), Expect = 1.100e-30 Identity = 61/121 (50.41%), Postives = 90/121 (74.38%), Query Frame = 0 Query: 35 VHILLPTYQLRPREDEKFSPAVAQRLAEQVLVDELKGKAYDDESVTNWAIVVADAVKKGVKAQNIPRFKVVVQVVLGEVREQGVWVASRCLWDSITDNHTSATFINESLWCTVLIFAVYTD 156 V I+LPTY +P EDEKF P+ + +AE+ + EL+ K YD E W++ +AD +++GVK N+PR+K+VVQV +G++++QGV VASRCLWD+ TDN+ S F N+SLWC+ ++F VYT+ Sbjct: 12 VEIVLPTYITKPSEDEKFYPSEVKAVAEKAVQVELQDKEYDGEEAKEWSLNIADTIREGVKTLNVPRYKIVVQVTIGQMKDQGVRVASRCLWDTATDNYASVQFKNQSLWCSAMVFGVYTE 132
BLAST of NO02G03790 vs. NCBI_GenBank
Match: XP_009040579.1 (hypothetical protein AURANDRAFT_32091 [Aureococcus anophagefferens] >EGB04664.1 hypothetical protein AURANDRAFT_32091 [Aureococcus anophagefferens]) HSP 1 Score: 137.9 bits (346), Expect = 2.700e-29 Identity = 57/121 (47.11%), Postives = 87/121 (71.90%), Query Frame = 0 Query: 35 VHILLPTYQLRPREDEKFSPAVAQRLAEQVLVDELKGKAYDDESVTNWAIVVADAVKKGVKAQNIPRFKVVVQVVLGEVREQGVWVASRCLWDSITDNHTSATFINESLWCTVLIFAVYTD 156 + ++LPTY + P E EKF P+ A+++ E+VL +L+ YDDES W +++ + +K +K+ NIPR+KVVVQV +G++++QGV VASRCLWD DN+ S + NE+LW V++F +YTD Sbjct: 13 IEVVLPTYSMNPTEVEKFYPSEAKQICERVLTGQLENATYDDESAKEWILLIGNTIKSEIKSLNIPRYKVVVQVTIGQMKDQGVSVASRCLWDISNDNYASVNYTNETLWANVMVFVIYTD 133
BLAST of NO02G03790 vs. NCBI_GenBank
Match: XP_009041904.1 (hypothetical protein AURANDRAFT_34069 [Aureococcus anophagefferens] >EGB03433.1 hypothetical protein AURANDRAFT_34069 [Aureococcus anophagefferens]) HSP 1 Score: 136.7 bits (343), Expect = 6.000e-29 Identity = 59/131 (45.04%), Postives = 88/131 (67.18%), Query Frame = 0 Query: 25 QEGKVSAHAGVHILLPTYQLRPREDEKFSPAVAQRLAEQVLVDELKGKAYDDESVTNWAIVVADAVKKGVKAQNIPRFKVVVQVVLGEVREQGVWVASRCLWDSITDNHTSATFINESLWCTVLIFAVYTD 156 +EG + ++LPTY + P E E+F P+ A+R+ E+VLV EL K Y ++S +W I + + +K +K +PR+K++VQV +G++++QGV VASRCLWD DN+TS F N SLW V++F VYTD Sbjct: 4 EEGPRPGQQVIEVVLPTYSMIPAEQERFYPSEAKRICERVLVGELDNKEYFEDSAKDWIISIGNTIKSEIKCLTVPRYKIIVQVTIGQMKDQGVSVASRCLWDITFDNYTSVNFTNSSLWANVMVFGVYTD 134
BLAST of NO02G03790 vs. NCBI_GenBank
Match: OQS01929.1 (Outer Dynein Arm Light Chain 2 [Thraustotheca clavata]) HSP 1 Score: 119.8 bits (299), Expect = 7.600e-24 Identity = 55/122 (45.08%), Postives = 79/122 (64.75%), Query Frame = 0 Query: 35 VHILLPTYQLRPREDEKFSPAVAQRLAEQVLVDELKGKAYDDESVTNWAIVVADAVKKGVKAQ-NIPRFKVVVQVVLGEVREQGVWVASRCLWDSITDNHTSATFINESLWCTVLIFAVYTD 156 + I +PTY + P EDEKF + + L +EL+GK YD+E W +ADA+K VKA N PR+K++VQ +G+ + Q V +ASRCLWD+ DNH SA F NE++W T ++F +Y+D Sbjct: 389 IKIYMPTYIMAPTEDEKFRRRKVCGIVSECLKNELQGKEYDEEDAKQWCNSIADAIKNRVKADCNFPRYKIIVQAFVGQQKLQDVRIASRCLWDNDNDNHASAEFHNETIWATCIVFGLYSD 510
BLAST of NO02G03790 vs. NCBI_GenBank
Match: XP_008865232.1 (hypothetical protein H310_03218 [Aphanomyces invadans] >ETW05455.1 hypothetical protein H310_03218 [Aphanomyces invadans]) HSP 1 Score: 114.8 bits (286), Expect = 2.500e-22 Identity = 59/156 (37.82%), Postives = 91/156 (58.33%), Query Frame = 0 Query: 1 MADIPASPSPAAIQISPSIPPKEMQEGKVSAHAGVHILLPTYQLRPREDEKFSPAVAQRLAEQVLVDELKGKAYDDESVTNWAIVVADAVKKGVKAQ-NIPRFKVVVQVVLGEVREQGVWVASRCLWDSITDNHTSATFINESLWCTVLIFAVYTD 156 MAD+ +S A ++P K Q + + +PTY + P EDE+F + + LV EL+ K YD++ WA +ADAVK ++ + N PR+K++VQ +G+ + Q V +ASRCLWD+ DNH SA F N+S+W T ++F +Y+D Sbjct: 1 MADVDSSGGVPA--VAPVAASKNAQV--------IKVYMPTYIMAPTEDERFRRKTVCAIVSECLVKELENKEYDEDDAKVWATAIADAVKNRIRTECNFPRYKIIVQTFVGQQKLQDVRIASRCLWDNDHDNHASAEFANQSIWATCIVFGMYSD 146
BLAST of NO02G03790 vs. NCBI_GenBank
Match: EJY78446.1 (Flagellar outer dynein arm light chain 2 (macronuclear) [Oxytricha trifallax]) HSP 1 Score: 113.6 bits (283), Expect = 5.500e-22 Identity = 54/113 (47.79%), Postives = 76/113 (67.26%), Query Frame = 0 Query: 41 TYQLRPREDEKFSPAVAQRLAEQVLVDELKGKAYDDESVTNWAIVVADAVKKGVKAQNIPRFKVVVQVVLGEVREQGVWVASRCLWDSITDNHTSATFINESLWCTVLIFAVY 154 TY+L PRE E+F P+ + L E+V++ LK K YD + + A +AD +K VKA NIP +K++VQ V+GE+ QGV VAS+CLWD DN S T+ N SL+CT ++F V+ Sbjct: 12 TYRLEPREHERFYPSKVRSLIEEVVLRNLKDKEYDHATAKSMAESIADQIKMQVKALNIPSYKIIVQTVIGEITGQGVRVASKCLWDDSNDNFASFTYQNNSLFCTGIVFGVF 124
BLAST of NO02G03790 vs. NCBI_GenBank
Match: CDW80687.1 (UNKNOWN [Stylonychia lemnae]) HSP 1 Score: 113.6 bits (283), Expect = 5.500e-22 Identity = 55/113 (48.67%), Postives = 76/113 (67.26%), Query Frame = 0 Query: 41 TYQLRPREDEKFSPAVAQRLAEQVLVDELKGKAYDDESVTNWAIVVADAVKKGVKAQNIPRFKVVVQVVLGEVREQGVWVASRCLWDSITDNHTSATFINESLWCTVLIFAVY 154 T++L PRE+E+F P+ + L E+V++ LK K YD + A +AD +K VKA NIP +K+VVQ V+GE+ QGV VAS+CLWD DN S T+ N SL+CT ++F VY Sbjct: 12 TFRLEPRENERFYPSKVRSLIEEVILRNLKDKEYDHATAKTMAESIADQIKMQVKALNIPSYKIVVQTVIGEITGQGVRVASKCLWDDQNDNLASFTYQNNSLFCTGMVFGVY 124
BLAST of NO02G03790 vs. NCBI_GenBank
Match: XP_008604719.1 (hypothetical protein SDRG_00990 [Saprolegnia diclina VS20] >EQC42150.1 hypothetical protein SDRG_00990 [Saprolegnia diclina VS20]) HSP 1 Score: 112.8 bits (281), Expect = 9.300e-22 Identity = 51/122 (41.80%), Postives = 77/122 (63.11%), Query Frame = 0 Query: 35 VHILLPTYQLRPREDEKFSPAVAQRLAEQVLVDELKGKAYDDESVTNWAIVVADAVKKGVKAQ-NIPRFKVVVQVVLGEVREQGVWVASRCLWDSITDNHTSATFINESLWCTVLIFAVYTD 156 + I +PTY + P +DEKF + + L EL K YD+E W+ +ADAVK ++A+ PR+K++VQ +G+ + Q V +ASRCLWD+ DNH SA F NE++W T ++F +Y+D Sbjct: 20 IKIYMPTYIMAPTDDEKFRRRKVSGIVAECLQRELDAKEYDEEDAKQWSTAIADAVKNRIRAECAFPRYKIIVQAFVGQQKLQDVRIASRCLWDNDYDNHASAEFHNETIWATCIVFGLYSD 141
BLAST of NO02G03790 vs. NCBI_GenBank
Match: XP_008915128.1 (hypothetical protein PPTG_18705 [Phytophthora parasitica INRA-310] >ETI31035.1 hypothetical protein F443_21953 [Phytophthora parasitica P1569] >ETK71417.1 hypothetical protein L915_21348 [Phytophthora parasitica] >ETL24856.1 hypothetical protein L916_21219 [Phytophthora parasitica] >ETL78073.1 hypothetical protein L917_21073 [Phytophthora parasitica] >ETM99632.1 hypothetical protein PPTG_18705 [Phytophthora parasitica INRA-310] >ETO59738.1 hypothetical protein F444_21972 [Phytophthora parasitica P1976] >ETP00831.1 hypothetical protein F441_21838 [Phytophthora parasitica CJ01A1] >ETP28977.1 hypothetical protein F442_21816 [Phytophthora parasitica P10297]) HSP 1 Score: 112.5 bits (280), Expect = 1.200e-21 Identity = 52/134 (38.81%), Postives = 82/134 (61.19%), Query Frame = 0 Query: 23 EMQEGKVSAHAGVHILLPTYQLRPREDEKFSPAVAQRLAEQVLVDELKGKAYDDESVTNWAIVVADAVKKGVKAQ-NIPRFKVVVQVVLGEVREQGVWVASRCLWDSITDNHTSATFINESLWCTVLIFAVYTD 156 EM G+ A+ + +++PTY + P EDE+F + + + EL+GK +D+ W+ +ADAVK + A+ N PR+K+VVQ +G+ R Q V + SRCLWD+ DNH SA F ++ +W T ++F+ Y D Sbjct: 5 EMASGR--ANQVIKVVMPTYIMAPTEDERFRRKKVCNIISECMTKELEGKEFDESDCKGWSTAIADAVKARIHAECNFPRYKIVVQTFIGQQRLQDVRITSRCLWDNDHDNHASAVFNSQHIWATCVVFSFYAD 136
BLAST of NO02G03790 vs. NCBI_GenBank
Match: KUF76480.1 (Tctex1 domain-containing protein 1 [Phytophthora nicotianae]) HSP 1 Score: 111.7 bits (278), Expect = 2.100e-21 Identity = 52/134 (38.81%), Postives = 81/134 (60.45%), Query Frame = 0 Query: 23 EMQEGKVSAHAGVHILLPTYQLRPREDEKFSPAVAQRLAEQVLVDELKGKAYDDESVTNWAIVVADAVKKGVKAQ-NIPRFKVVVQVVLGEVREQGVWVASRCLWDSITDNHTSATFINESLWCTVLIFAVYTD 156 EM G+ A+ + +++PTY + P EDE+F + + + EL GK +D+ W+ +ADAVK + A+ N PR+K+VVQ +G+ R Q V + SRCLWD+ DNH SA F ++ +W T ++F+ Y D Sbjct: 5 EMASGR--ANQVIKVVMPTYIMAPTEDERFRRKKVCNIISECMTKELXGKEFDESDCKGWSTAIADAVKARIHAECNFPRYKIVVQTFIGQQRLQDVRITSRCLWDNDHDNHASAVFNSQHIWATCVVFSFYAD 136 The following BLAST results are available for this feature:
BLAST of NO02G03790 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G03790 ID=NO02G03790|Name=NO02G03790|organism=Nannochloropsis oceanica|type=gene|length=2781bpback to top protein sequence of NO02G03790.1 >NO02G03790.1-protein ID=NO02G03790.1-protein|Name=NO02G03790.1|organism=Nannochloropsis oceanica|type=polypeptide|length=156bpback to top Synonyms
Publications
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