NO02G02860, NO02G02860 (gene) Nannochloropsis oceanica

Overview
NameNO02G02860
Unique NameNO02G02860
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2208
Alignment locationchr2:769282..771489 -

Link to JBrowse

Properties
Property NameValue
DescriptionNuclear pore complex protein nup98-nup96 isoform 1
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:769282..771489 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR021967Nup96
Vocabulary: Molecular Function
TermDefinition
GO:0017056structural constituent of nuclear pore
Vocabulary: Biological Process
TermDefinition
GO:0006913nucleocytoplasmic transport
Vocabulary: Cellular Component
TermDefinition
GO:0005643nuclear pore
Homology
BLAST of NO02G02860 vs. NCBI_GenBank
Match: EWM30364.1 (nuclear pore complex protein nup98-nup96 isoform 1 [Nannochloropsis gaditana])

HSP 1 Score: 793.1 bits (2047), Expect = 7.300e-226
Identity = 427/744 (57.39%), Postives = 503/744 (67.61%), Query Frame = 0
Query:    7 KEGGREGGKE---GYLGPLRVHKEYAQRVQEATATRAPRAALCSWLLPXXXXXXXXXXXXXXXXXXXXXXXVDLYYHLVQCMHALAREAGGREDETSRQTWELVNALWGQEGGNKSRPLPLSGSLGGISQALLEGGANHTDWERRRQAVCRWLKCAVRVESEGTPLEASGDETADLHAVLELMKSHRITEAATLAAQSGFLRLATLIPLAGHRPGIDMMRHQEALRLQLQESGLAAIFGLLSGVGSEGEGRKEGG---GLDWMRRLGEYLWFATGNLPTGGXXXXA---ETDRLIAAIEEFNEKMPSPPLPGWLRKRWEGGRG-GWHDARVGPNSLFFDLLQMYRSEAYPLALLLDPRGLTENERDYRMSWLLLTLLGALGVVPPGTGEGGKKGVXXXXXXXXXXXXIWQQVTSSLVFQLVSVGMWEWAVYVLMHAPETPARTRSIRELVGRFGWGCVRGGEEWSFLVDELGLPFEWLEEARATWLRSEGVLFLDEGGREGGEGDDALGHFLAGGKWREASEILMNVVAPRLLNDDRGQQLRVLLGRLFAADGTGAXXXXXXXXXXXXXXXXXLWAYLDFLENM-HRE----SMSVESFARMEDELVAILPSLVQGGKGADRNSCFAWRGEILGPEEAGTERDMYAVRRREGVREEEEDLVPPPLHAIRNMVLTDIIKKIYSLHRAQVREEAGKEGGWEGRASLFPSKTQVCRLEDMCQDYALHQVSSLTIEFIAANLDGGGVF 736
            +E G +GG E   GYLGPL VHK +A+ V+ A+ TRAPRA   +   P                       V LY+H+V C+HALA EA  RED+ SRQTWEL NALWGQEGG K+RPLPLSGSLG + Q LL  GA+H DWERR QAVCRWLK  VR E E  P+  SGDE+ADL AVL+LMKSHRIT+AA+LA++SGFLRLATLIPLAGH+P  D +R Q ALR  +Q+  LAAI+GLLSG GSE     + G   GLDWMRRLGEY+WF T     G     A   +TDRLI AIE F+++MPSPPLP WLR RWE GRG  WHDARVGPNSLF+DLLQMYRSEAYPL+L+LDPRGLTENERDYR+SWL+LTLLGAL +  P   E  +               IW +VTSSLVFQLV +G+W WAVYVL+HAPETPART ++++LVGRFGW    G  +WSFLVDELG+P  WLE+ARAT+LR++GVLFLDEG  +G   DDALGHFL  G  + A+E++MNVVAPRLL DDRG +L  LL      +                      WAYL+ LE + H E         + A  E++L+AILPSLV GG+G DRN CF W  E L P EAG   DMYA R   G R    D +PPPLHAIRNMVLTD+IKK++  HR Q RE +  E G   R+ L P K+Q+CRLEDMCQDYAL QV  LT +FIA  LDG  VF
Sbjct:  436 EEAGTKGGVEGLRGYLGPLGVHKAFARGVEPASETRAPRAGFRAGGSP-----------------ATGDVDVGLYHHMVDCLHALATEATRREDDASRQTWELFNALWGQEGGGKARPLPLSGSLGALCQVLLPDGASHNDWERRCQAVCRWLKRIVRREVEDLPVRGSGDESADLRAVLDLMKSHRITDAASLASKSGFLRLATLIPLAGHKPATDYLRQQPALRRTVQDPALAAIYGLLSGTGSEANETSDEGPKAGLDWMRRLGEYMWFKTDGRSPGAGSAGAGDDDTDRLILAIEAFDDEMPSPPLPAWLRARWERGRGRAWHDARVGPNSLFYDLLQMYRSEAYPLSLVLDPRGLTENERDYRLSWLMLTLLGALSIGHPTGPEAVEAAT-----------QIWMRVTSSLVFQLVGMGLWPWAVYVLLHAPETPARTDAVKDLVGRFGWAFQPGSTDWSFLVDELGVPAAWLEDARATYLRAQGVLFLDEG--KGASADDALGHFLRAGDTKAAAELIMNVVAPRLLIDDRGPELHALLAGFLGPE------RGELTDATINSGNKACWAYLEVLEALRHLEDSWGEKEAPAPAHFEEQLMAILPSLVDGGQGGDRNGCFNWCAERLDPGEAGRVIDMYAQR---GSR-SAPDSMPPPLHAIRNMVLTDVIKKLFFFHRLQARERSMWEEGMAPRSCL-PGKSQLCRLEDMCQDYALQQVGCLTSDFIARRLDGDEVF 1138          
BLAST of NO02G02860 vs. NCBI_GenBank
Match: KFQ83260.1 (Nuclear pore complex protein Nup98-Nup96, partial [Phaethon lepturus])

HSP 1 Score: 137.5 bits (345), Expect = 1.700e-28
Identity = 136/417 (32.61%), Postives = 178/417 (42.69%), Query Frame = 0
Query:  103 TWELVNALWGQEGGNKSRPLPLSGSLGGISQALLEGGANHTDWERRRQAVCRWLK--CAVRVESEGTPLEASGDETADLHAVLELMKSHRITEAATLAAQSGFLRLATLI-PLAGHRPGIDMMRHQ--EALRLQ----LQESGLAAIFGLLSGVG----SEGEGRKEGGGLDWMRRLGEYLWFATGNLPTGGXXXXAETDRLIAAIEEFNEKMPSPPLPGWLRKRWEGGRGGWHDARVGP--NSLFFDLLQMYRSEAYPLALLLDPRGLTENERDYRMSWLLLTLLGALGVVPPGTGEGGKKGVXXXXXXXXXXXXIWQQVTSSLVFQLVSVGMWEWAVYVLMHAPETPARTRSIRELVGRFGWGCV--RGGEEW---SFLVDELGLPFEWLEEARATWLRSEG-----VLFLDEGG 495
            TW L  A+WG           L  SL   S+ +L           RR+A  RWL    A R+E E   L   G+ T    AV   +   RI EA  LA QSG  RLA L+  LAG +P  D++  Q  +  RLQ    +QE  L  IF LL+G      SE         LDW R +  +LW+     PT                    EK    PLP +L    + G     D   G     + F LL++Y    Y L  LLDPR +T +  DYR+SW L  +L AL          G                    + +S   QL S G+WEWAV++L+H P+T  R +++REL+ R    C+     E W   SFL   L +P EW+ EA+A   R EG      LFL + G
Sbjct: 1006 TWTLCEAIWG-------NLKELEASLEEPSEYILA--------LERRKAFSRWLSETAAGRIEEE-VSLSRHGNHT---EAVFSCLTGKRIGEACRLAQQSGDHRLALLLSQLAGSQPVRDLLTMQLVDWHRLQADCFIQEERL-RIFALLAGKPVWQLSERISINVCSLLDWKRCMAVHLWYLLP--PTASISKALAMYEAAFQNTPECEKYACCPLPPYLE---DSGCAIEEDDNAGRPLRDVCFHLLKLYSDRHYDLNQLLDPRSVTSDPLDYRLSWHLWEVLRALNYTHLFKQSQG-------------------VLNASYAAQLESKGLWEWAVFILLHEPDTHIREKAVRELLNRH---CILSETPESWAKESFLTQRLCIPLEWIHEAKAVRARMEGDKHKEALFLFKAG 1375          
BLAST of NO02G02860 vs. NCBI_GenBank
Match: XP_010293690.1 (PREDICTED: nuclear pore complex protein Nup98-Nup96, partial [Phaethon lepturus])

HSP 1 Score: 137.5 bits (345), Expect = 1.700e-28
Identity = 136/417 (32.61%), Postives = 178/417 (42.69%), Query Frame = 0
Query:  103 TWELVNALWGQEGGNKSRPLPLSGSLGGISQALLEGGANHTDWERRRQAVCRWLK--CAVRVESEGTPLEASGDETADLHAVLELMKSHRITEAATLAAQSGFLRLATLI-PLAGHRPGIDMMRHQ--EALRLQ----LQESGLAAIFGLLSGVG----SEGEGRKEGGGLDWMRRLGEYLWFATGNLPTGGXXXXAETDRLIAAIEEFNEKMPSPPLPGWLRKRWEGGRGGWHDARVGP--NSLFFDLLQMYRSEAYPLALLLDPRGLTENERDYRMSWLLLTLLGALGVVPPGTGEGGKKGVXXXXXXXXXXXXIWQQVTSSLVFQLVSVGMWEWAVYVLMHAPETPARTRSIRELVGRFGWGCV--RGGEEW---SFLVDELGLPFEWLEEARATWLRSEG-----VLFLDEGG 495
            TW L  A+WG           L  SL   S+ +L           RR+A  RWL    A R+E E   L   G+ T    AV   +   RI EA  LA QSG  RLA L+  LAG +P  D++  Q  +  RLQ    +QE  L  IF LL+G      SE         LDW R +  +LW+     PT                    EK    PLP +L    + G     D   G     + F LL++Y    Y L  LLDPR +T +  DYR+SW L  +L AL          G                    + +S   QL S G+WEWAV++L+H P+T  R +++REL+ R    C+     E W   SFL   L +P EW+ EA+A   R EG      LFL + G
Sbjct:  989 TWTLCEAIWG-------NLKELEASLEEPSEYILA--------LERRKAFSRWLSETAAGRIEEE-VSLSRHGNHT---EAVFSCLTGKRIGEACRLAQQSGDHRLALLLSQLAGSQPVRDLLTMQLVDWHRLQADCFIQEERL-RIFALLAGKPVWQLSERISINVCSLLDWKRCMAVHLWYLLP--PTASISKALAMYEAAFQNTPECEKYACCPLPPYLE---DSGCAIEEDDNAGRPLRDVCFHLLKLYSDRHYDLNQLLDPRSVTSDPLDYRLSWHLWEVLRALNYTHLFKQSQG-------------------VLNASYAAQLESKGLWEWAVFILLHEPDTHIREKAVRELLNRH---CILSETPESWAKESFLTQRLCIPLEWIHEAKAVRARMEGDKHKEALFLFKAG 1358          
BLAST of NO02G02860 vs. NCBI_GenBank
Match: XP_010078458.1 (PREDICTED: nuclear pore complex protein Nup98-Nup96, partial [Pterocles gutturalis])

HSP 1 Score: 135.2 bits (339), Expect = 8.300e-28
Identity = 134/426 (31.46%), Postives = 184/426 (43.19%), Query Frame = 0
Query:  103 TWELVNALWGQEGGNKSRPLPLSGSLGGISQALLEGGANHTDWERRRQAVCRWLK--CAVRVESEGTPLEASGDETADLHAVLELMKSHRITEAATLAAQSGFLRLATLI-PLAGHRPGIDMMRHQEALRLQLQESGL-----AAIFGLLSGVG----SEGEGRKEGGGLDWMRRLGEYLWFATGNLPTGGXXXXAETDRLIAAIEEFNEKMPS------PPLPGWLRKRWEGGRGGWHDARVGP--NSLFFDLLQMYRSEAYPLALLLDPRGLTENERDYRMSWLLLTLLGALGVVPPGTGEGGKKGVXXXXXXXXXXXXIWQQ----VTSSLVFQLVSVGMWEWAVYVLMHAPETPARTRSIRELVGRFGWGCV--RGGEEW---SFLVDELGLPFEWLEEARATWLRSEG-----VLFLDEGG 495
            TW L  A+W              G+L  + +A LE  + +T    RR+A  RWL    A R+E E   L   G+    + AV   +   RI EA  LA QSG  RLA L+  LAG +P  D++  Q     +LQ  G        IF LL+G      SE         LDW R +  +LW+    LP       A   R +A  E   +  P        PLP +L    + G     D   G     + F LL++Y    Y L  LLDPR +T +  D+R+SW L  +L AL                           ++QQ    + +S   QL S G+WEWAV++L+H P+   R +++REL+ R    CV     E W   +FL   L +P EW+ EA+A   R EG      LFL + G
Sbjct: 1251 TWTLCEAIW--------------GNLKEL-EASLEEPSEYTLALERRKAFSRWLSETAAGRIEEE-VSLSRHGNR---IEAVFSCLTGKRIGEACRLAQQSGDHRLALLLSQLAGSQPVRDLLTMQLVDWHRLQADGFIQEERLRIFALLAGKPVWQLSERTSINVCSLLDWKRCVAVHLWYL---LP-----PTASIPRALAMYESAFQNTPECEKYACCPLPPYLE---DSGCVVEEDDNAGRPLRDVCFHLLKLYSDRHYDLDQLLDPRSITSDPLDFRLSWHLWEVLRALNYT-----------------------HLFQQSQGVLNASYAAQLESEGLWEWAVFILLHEPDMHTREKAVRELLSRH---CVLSETPESWAKENFLTQRLCVPPEWIHEAKAVRARMEGDRHKEALFLVKAG 1620          
BLAST of NO02G02860 vs. NCBI_GenBank
Match: XP_008121637.1 (PREDICTED: nuclear pore complex protein Nup98-Nup96 [Anolis carolinensis])

HSP 1 Score: 134.8 bits (338), Expect = 1.100e-27
Identity = 137/455 (30.11%), Postives = 193/455 (42.42%), Query Frame = 0
Query:  104 WELVNALWGQEGGNKSRPLPLSGSLGGISQALLEGGANHTDWERRRQAVCRWLKCAVRVESEGTPLEASGDETAD-LHAVLELMKSHRITEAATLAAQSGFLRLATLI-PLAGHRPGIDMMRHQEALRLQLQ-----ESGLAAIFGLLSGVG----SEGEGRKEGGGLDWMRRLGEYLWFATGNLPTGGXXXXAET---DRLIAAIEEFNEKMPSPPLPGWLRKRWEGGRGGWHDARVGPNSLFFDLLQMYRSEAYPLALLLDPRGLTENERDYRMSWLLLTLLGALGVVPPGTGEGGKKGVXXXXXXXXXXXXIWQQVTSSLVFQLVSVGMWEWAVYVLMHAPETPARTRSIRELVGRFGWGCVRGGEEW---SFLVDELGLPFEWLEEARATWLRSEGVLFLDEGGREGGEGDDALGHFLAGGKWREASEILMNVVAPRLLNDDRGQQLRVLL 542
            W L  ALWG       R   L   LG  S+        +     RR+A  RWL    R  +E    E S  + ++   AV  L+   +I EA  LA  SG  RLA L+  L G +   +++  Q A   QLQ     +     I+ LL+G      SE         LDW R LG +LW+    LP+      A T   D    + E  +EK   PPLP +L     G      DA      + F LL++Y    Y L  LLDPR +T +  D+R+SW L   L AL          G                    +++S   QL S G+WEWAV+VL+H P    R R++RE++GR     V   + W   +FL ++L LP EW+ EA+A   R           REG    +AL H    G W     +++  +A   + +++   L+  L
Sbjct: 1305 WSLCEALWG-------RLKELEACLGSPSE--------YVQALERRKAFSRWLS---RTAAERIRQEVSLSQNSNPPEAVFSLLTGKQIKEACRLAQNSGDHRLALLLSQLVGSQEVRELLALQLADWHQLQADCFIQEERLNIYALLAGKPVWRLSERRSLNVCSQLDWKRCLGVHLWYL---LPSTAPLSQALTLYEDAFQDSPE--SEKYACPPLPPYL--EGSGFLVEEGDAHHALQDVCFHLLKLYSDRCYDLHQLLDPRSITADPLDHRLSWHLWEALRALNYTHLSEQSTG-------------------ILSASYAAQLESQGLWEWAVFVLLHIPSAQQRERAVREVLGRH-CQLVETPDLWEKEAFLTEKLCLPPEWIHEAKAVRAR-----------REGDTPLEAL-HLFKAGHWSPCHRLVVRHLASDAVINEKYTYLKGFL 1702          
BLAST of NO02G02860 vs. NCBI_GenBank
Match: XP_008123279.1 (PREDICTED: nuclear pore complex protein Nup98-Nup96-like [Anolis carolinensis])

HSP 1 Score: 134.8 bits (338), Expect = 1.100e-27
Identity = 137/455 (30.11%), Postives = 193/455 (42.42%), Query Frame = 0
Query:  104 WELVNALWGQEGGNKSRPLPLSGSLGGISQALLEGGANHTDWERRRQAVCRWLKCAVRVESEGTPLEASGDETAD-LHAVLELMKSHRITEAATLAAQSGFLRLATLI-PLAGHRPGIDMMRHQEALRLQLQ-----ESGLAAIFGLLSGVG----SEGEGRKEGGGLDWMRRLGEYLWFATGNLPTGGXXXXAET---DRLIAAIEEFNEKMPSPPLPGWLRKRWEGGRGGWHDARVGPNSLFFDLLQMYRSEAYPLALLLDPRGLTENERDYRMSWLLLTLLGALGVVPPGTGEGGKKGVXXXXXXXXXXXXIWQQVTSSLVFQLVSVGMWEWAVYVLMHAPETPARTRSIRELVGRFGWGCVRGGEEW---SFLVDELGLPFEWLEEARATWLRSEGVLFLDEGGREGGEGDDALGHFLAGGKWREASEILMNVVAPRLLNDDRGQQLRVLL 542
            W L  ALWG       R   L   LG  S+        +     RR+A  RWL    R  +E    E S  + ++   AV  L+   +I EA  LA  SG  RLA L+  L G +   +++  Q A   QLQ     +     I+ LL+G      SE         LDW R LG +LW+    LP+      A T   D    + E  +EK   PPLP +L     G      DA      + F LL++Y    Y L  LLDPR +T +  D+R+SW L   L AL          G                    +++S   QL S G+WEWAV+VL+H P    R R++RE++GR     V   + W   +FL ++L LP EW+ EA+A   R           REG    +AL H    G W     +++  +A   + +++   L+  L
Sbjct:  333 WSLCEALWG-------RLKELEACLGSPSE--------YVQALERRKAFSRWLS---RTAAERIRQEVSLSQNSNPPEAVFSLLTGKQIKEACRLAQNSGDHRLALLLSQLVGSQEVRELLALQLADWHQLQADCFIQEERLNIYALLAGKPVWRLSERRSLNVCSQLDWKRCLGVHLWYL---LPSTAPLSQALTLYEDAFQDSPE--SEKYACPPLPPYL--EGSGFLVEEGDAHHALQDVCFHLLKLYSDRCYDLHQLLDPRSITADPLDHRLSWHLWEALRALNYTHLSEQSTG-------------------ILSASYAAQLESQGLWEWAVFVLLHIPSAQQRERAVREVLGRH-CQLVETPDLWEKEAFLTEKLCLPPEWIHEAKAVRAR-----------REGDTPLEAL-HLFKAGHWSPCHRLVVRHLASDAVINEKYTYLKGFL 730          
BLAST of NO02G02860 vs. NCBI_GenBank
Match: KFO69642.1 (Nuclear pore complex protein Nup98-Nup96, partial [Cuculus canorus])

HSP 1 Score: 134.4 bits (337), Expect = 1.400e-27
Identity = 132/416 (31.73%), Postives = 181/416 (43.51%), Query Frame = 0
Query:  103 TWELVNALWGQEGGNKSRPLPLSGSLGGISQALLEGGANHTDWERRRQAVCRWL-KCAVRVESEGTPLEASGDETADLHAVLELMKSHRITEAATLAAQSGFLRLATLI-PLAGHRPGIDMMRHQ--EALRLQ----LQESGLAAIFGLLSGVG----SEGEGRKEGGGLDWMRRLGEYLWFATGNLPTGGXXXXAETDRLIAAIEEFNEKMPSPPLPGWLRKRWEGGRGGWHDARVGP--NSLFFDLLQMYRSEAYPLALLLDPRGLTENERDYRMSWLLLTLLGALGVVPPGTGEGGKKGVXXXXXXXXXXXXIWQQVTSSLVFQLVSVGMWEWAVYVLMHAPETPARTRSIRELVGRFGWGCVRGG--EEW---SFLVDELGLPFEWLEEARATWLRSEG-----VLFLDEGG 495
            TW L  A+W              G+L  + +A LE  + +     RR+A  RWL + A R   E   L   G+    + AV   +   RI EA  LA QSG  RLA L+  LAG +P  D++  Q  +  RLQ    +QE  L  IF LL+G      SE         LDW R +  +LW+     PT                   +EK    PLP +L    + G     +   G     + F LL++Y    Y L  LLDPR +T +  DYR+SW L  +L AL          G                    + +S   QL S G+WEWAV++L+H P+T  R +++REL+ R    C+  G  E W   +FL   L +P EW+ EA+A   R EG      LFL + G
Sbjct: 1277 TWTLCEAIW--------------GNLKEL-EASLEEPSEYILTLERRKAFSRWLSETAARRIEEEVSLSRHGNH---VEAVFSCLTGKRIGEACRLAQQSGDHRLALLLSQLAGSQPVRDLLTMQLVDWHRLQADCFIQEERL-RIFALLAGKPVWQLSERISINVCSLLDWKRCVAVHLWYLLP--PTASISKALAMYESAFQNTSESEKYACCPLPPYLE---DSGFVVEDNNNTGRPLRDVCFHLLKLYSDRHYDLDQLLDPRSVTSDPLDYRLSWHLWEVLRALNYTHLFKQSQG-------------------VLNASFAAQLESEGLWEWAVFILLHEPDTYIREKAVRELLNRH---CILSGTPESWAKETFLTQHLCVPPEWIHEAKAVRARMEGDKHKEALFLFKAG 1646          
BLAST of NO02G02860 vs. NCBI_GenBank
Match: XP_009555402.1 (PREDICTED: nuclear pore complex protein Nup98-Nup96 [Cuculus canorus])

HSP 1 Score: 134.4 bits (337), Expect = 1.400e-27
Identity = 132/416 (31.73%), Postives = 181/416 (43.51%), Query Frame = 0
Query:  103 TWELVNALWGQEGGNKSRPLPLSGSLGGISQALLEGGANHTDWERRRQAVCRWL-KCAVRVESEGTPLEASGDETADLHAVLELMKSHRITEAATLAAQSGFLRLATLI-PLAGHRPGIDMMRHQ--EALRLQ----LQESGLAAIFGLLSGVG----SEGEGRKEGGGLDWMRRLGEYLWFATGNLPTGGXXXXAETDRLIAAIEEFNEKMPSPPLPGWLRKRWEGGRGGWHDARVGP--NSLFFDLLQMYRSEAYPLALLLDPRGLTENERDYRMSWLLLTLLGALGVVPPGTGEGGKKGVXXXXXXXXXXXXIWQQVTSSLVFQLVSVGMWEWAVYVLMHAPETPARTRSIRELVGRFGWGCVRGG--EEW---SFLVDELGLPFEWLEEARATWLRSEG-----VLFLDEGG 495
            TW L  A+W              G+L  + +A LE  + +     RR+A  RWL + A R   E   L   G+    + AV   +   RI EA  LA QSG  RLA L+  LAG +P  D++  Q  +  RLQ    +QE  L  IF LL+G      SE         LDW R +  +LW+     PT                   +EK    PLP +L    + G     +   G     + F LL++Y    Y L  LLDPR +T +  DYR+SW L  +L AL          G                    + +S   QL S G+WEWAV++L+H P+T  R +++REL+ R    C+  G  E W   +FL   L +P EW+ EA+A   R EG      LFL + G
Sbjct: 1252 TWTLCEAIW--------------GNLKEL-EASLEEPSEYILTLERRKAFSRWLSETAARRIEEEVSLSRHGNH---VEAVFSCLTGKRIGEACRLAQQSGDHRLALLLSQLAGSQPVRDLLTMQLVDWHRLQADCFIQEERL-RIFALLAGKPVWQLSERISINVCSLLDWKRCVAVHLWYLLP--PTASISKALAMYESAFQNTSESEKYACCPLPPYLE---DSGFVVEDNNNTGRPLRDVCFHLLKLYSDRHYDLDQLLDPRSVTSDPLDYRLSWHLWEVLRALNYTHLFKQSQG-------------------VLNASFAAQLESEGLWEWAVFILLHEPDTYIREKAVRELLNRH---CILSGTPESWAKETFLTQHLCVPPEWIHEAKAVRARMEGDKHKEALFLFKAG 1621          
BLAST of NO02G02860 vs. NCBI_GenBank
Match: KFV05760.1 (Nuclear pore complex protein Nup98-Nup96, partial [Tauraco erythrolophus])

HSP 1 Score: 134.0 bits (336), Expect = 1.800e-27
Identity = 139/421 (33.02%), Postives = 182/421 (43.23%), Query Frame = 0
Query:  103 TWELVNALWGQEGGNKSRPLPLSGSLGGISQALLEGGANHTDWERRRQAVCRWLK--CAVRVESEGTPLEASGDETADLHAVLELMKSHRITEAATLAAQSGFLRLATLI-PLAGHRPGIDMMRHQ--EALRLQ----LQESGLAAIFGLLSGVG----SEGEGRKEGGGLDWMRRLGEYLWFATGNLPTGGXXXXAETDRLIAAIEEFNEKMPS------PPLPGWLRKRWEGGRGGWHDARVGPNSLFFDLLQMYRSEAYPLALLLDPRGLTENERDYRMSWLLLTLLGALGVVPPGTGEGGKKGVXXXXXXXXXXXXIWQQVTSSLVFQLVSVGMWEWAVYVLMHAPETPARTRSIRELVGRFGWGCV--RGGEEW---SFLVDELGLPFEWLEEARATWLRSEG-----VLFLDEGG 495
            TW L  A+WG           L  SL   S+ LL           RR+A  RWL    A R+E E   L   G+    + AV   +   RI EA  LA QSG  RLA L+  LAG +P  D++  Q  +  RLQ    +QE  L  IF LL+G      SE         LDW R +  +LW+    LP       A   + +A  E   +  P        PLP +L     G      DA      + F LL++Y    Y L  LLDPR +T +  DYR+SW L  +L AL          G                    + +S   QL S G+WEWAV+VL+H P+T  R +++REL+ R    CV     E W   +FL   L +P EW+ EA+A   R EG      LFL + G
Sbjct: 1270 TWTLCEAIWG-------NLKELEASLEEPSEYLLA--------LERRRAFSRWLSETAAGRIEEE-VSLSRHGNH---VEAVFSCLTGKRIGEACRLAQQSGDHRLALLLSQLAGSQPVRDLLTMQLVDWHRLQADCFIQEERL-RIFALLAGKPVWQLSERISINVCSLLDWKRCMAVHLWYL---LP-----PTASISKALAMYESAFQNTPECEKYACCPLPPYLED--SGCVIEEDDAGRPLRDVCFHLLKLYSDRHYDLDQLLDPRSVTSDPLDYRLSWHLWEVLRALNYTHLFKQSQG-------------------VLNASYAAQLESEGLWEWAVFVLLHEPDTHIREKAVRELLSRH---CVLSETPESWAKETFLTQRLCVPPEWIHEAKAVRARMEGDKHKEALFLFKAG 1638          
BLAST of NO02G02860 vs. NCBI_GenBank
Match: XP_009989585.1 (PREDICTED: nuclear pore complex protein Nup98-Nup96 [Tauraco erythrolophus])

HSP 1 Score: 134.0 bits (336), Expect = 1.800e-27
Identity = 139/421 (33.02%), Postives = 182/421 (43.23%), Query Frame = 0
Query:  103 TWELVNALWGQEGGNKSRPLPLSGSLGGISQALLEGGANHTDWERRRQAVCRWLK--CAVRVESEGTPLEASGDETADLHAVLELMKSHRITEAATLAAQSGFLRLATLI-PLAGHRPGIDMMRHQ--EALRLQ----LQESGLAAIFGLLSGVG----SEGEGRKEGGGLDWMRRLGEYLWFATGNLPTGGXXXXAETDRLIAAIEEFNEKMPS------PPLPGWLRKRWEGGRGGWHDARVGPNSLFFDLLQMYRSEAYPLALLLDPRGLTENERDYRMSWLLLTLLGALGVVPPGTGEGGKKGVXXXXXXXXXXXXIWQQVTSSLVFQLVSVGMWEWAVYVLMHAPETPARTRSIRELVGRFGWGCV--RGGEEW---SFLVDELGLPFEWLEEARATWLRSEG-----VLFLDEGG 495
            TW L  A+WG           L  SL   S+ LL           RR+A  RWL    A R+E E   L   G+    + AV   +   RI EA  LA QSG  RLA L+  LAG +P  D++  Q  +  RLQ    +QE  L  IF LL+G      SE         LDW R +  +LW+    LP       A   + +A  E   +  P        PLP +L     G      DA      + F LL++Y    Y L  LLDPR +T +  DYR+SW L  +L AL          G                    + +S   QL S G+WEWAV+VL+H P+T  R +++REL+ R    CV     E W   +FL   L +P EW+ EA+A   R EG      LFL + G
Sbjct: 1253 TWTLCEAIWG-------NLKELEASLEEPSEYLLA--------LERRRAFSRWLSETAAGRIEEE-VSLSRHGNH---VEAVFSCLTGKRIGEACRLAQQSGDHRLALLLSQLAGSQPVRDLLTMQLVDWHRLQADCFIQEERL-RIFALLAGKPVWQLSERISINVCSLLDWKRCMAVHLWYL---LP-----PTASISKALAMYESAFQNTPECEKYACCPLPPYLED--SGCVIEEDDAGRPLRDVCFHLLKLYSDRHYDLDQLLDPRSVTSDPLDYRLSWHLWEVLRALNYTHLFKQSQG-------------------VLNASYAAQLESEGLWEWAVFVLLHEPDTHIREKAVRELLSRH---CVLSETPESWAKETFLTQRLCVPPEWIHEAKAVRARMEGDKHKEALFLFKAG 1621          
The following BLAST results are available for this feature:
BLAST of NO02G02860 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM30364.17.300e-22657.39nuclear pore complex protein nup98-nup96 isoform 1... [more]
KFQ83260.11.700e-2832.61Nuclear pore complex protein Nup98-Nup96, partial ... [more]
XP_010293690.11.700e-2832.61PREDICTED: nuclear pore complex protein Nup98-Nup9... [more]
XP_010078458.18.300e-2831.46PREDICTED: nuclear pore complex protein Nup98-Nup9... [more]
XP_008121637.11.100e-2730.11PREDICTED: nuclear pore complex protein Nup98-Nup9... [more]
XP_008123279.11.100e-2730.11PREDICTED: nuclear pore complex protein Nup98-Nup9... [more]
KFO69642.11.400e-2731.73Nuclear pore complex protein Nup98-Nup96, partial ... [more]
XP_009555402.11.400e-2731.73PREDICTED: nuclear pore complex protein Nup98-Nup9... [more]
KFV05760.11.800e-2733.02Nuclear pore complex protein Nup98-Nup96, partial ... [more]
XP_009989585.11.800e-2733.02PREDICTED: nuclear pore complex protein Nup98-Nup9... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL016nonsL016Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR032ncniR032Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR000ngnoR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK006932NSK006932Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO02G02860.1NO02G02860.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|653066gene_870Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100026g17gene287Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO02G02860.1NO02G02860.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO02G02860 ID=NO02G02860|Name=NO02G02860|organism=Nannochloropsis oceanica|type=gene|length=2208bp
ATGGGGGCCACTTTGCTCAAGGAGGGAGGGAGGGAGGGAGGGAAGGAGGG
GTATCTGGGTCCGTTGAGAGTCCATAAGGAGTATGCACAGCGAGTGCAGG
AGGCGACGGCCACGCGGGCGCCACGGGCAGCGCTTTGTTCGTGGCTGCTT
CCTCCTTCCACTCCAGGCGGGCAACACCAAGAGCAACAAGAGCAGCAGCA
GCAGCAGCAGCAGCATAGGATTGTGGATCTGTATTATCATTTGGTGCAGT
GCATGCATGCTCTCGCCAGAGAGGCTGGTGGTCGGGAGGATGAAACGAGC
CGGCAGACGTGGGAGCTGGTGAATGCCTTGTGGGGTCAGGAAGGGGGAAA
TAAATCGAGACCCTTGCCTTTGTCCGGTTCATTAGGGGGGATAAGCCAGG
CGTTGCTCGAGGGAGGGGCGAATCACACAGACTGGGAACGACGACGGCAG
GCGGTGTGTCGGTGGTTGAAATGCGCGGTGAGGGTCGAGTCGGAAGGGAC
GCCCCTCGAAGCCTCGGGGGATGAAACGGCCGACTTGCATGCAGTCTTGG
AATTGATGAAATCCCATCGCATTACAGAAGCTGCGACGCTGGCCGCTCAA
AGTGGGTTTTTGAGGTTGGCGACTCTGATTCCTCTGGCGGGGCATCGGCC
GGGGATTGATATGATGAGGCATCAAGAGGCGCTGCGGCTTCAGTTGCAGG
AGTCGGGGTTAGCGGCAATATTCGGGTTGTTGAGTGGGGTGGGGAGTGAG
GGGGAGGGAAGAAAGGAAGGTGGGGGATTGGACTGGATGAGGCGGTTGGG
GGAGTATCTGTGGTTTGCGACCGGGAACTTGCCAACGGGGGGGGGGGGCG
GGGGAGCGGAGACGGATAGATTGATTGCGGCGATCGAGGAATTCAACGAA
AAGATGCCCTCGCCGCCGTTGCCTGGATGGTTGAGGAAGAGGTGGGAGGG
AGGGAGGGGTGGGTGGCATGACGCTCGTGTGGGGCCGAATTCGTTGTTTT
TTGATTTGCTGCAGATGTATCGTTCGGAAGCGTACCCGTTGGCGTTACTG
CTGGACCCGCGGGGGTTGACGGAGAATGAGCGAGACTACCGTATGTCATG
GTTGTTGCTTACCTTGCTGGGTGCTTTGGGGGTTGTTCCACCGGGTACGG
GAGAGGGAGGCAAGAAAGGAGTGGGAGAAGGAGGGGGAGGAGGAGCAGCA
GCTGCGGAGATTTGGCAGCAGGTGACTTCTAGTTTGGTGTTCCAGTTAGT
GAGTGTGGGCATGTGGGAGTGGGCCGTGTATGTGTTGATGCATGCGCCAG
AGACCCCGGCGCGGACGAGGAGCATCCGGGAACTGGTTGGGCGGTTTGGC
TGGGGTTGTGTAAGGGGGGGGGAGGAATGGAGTTTTTTGGTGGACGAGTT
GGGGTTGCCTTTCGAGTGGTTGGAGGAGGCAAGGGCGACGTGGCTGAGGA
GCGAAGGAGTGTTGTTTTTGGACGAAGGAGGGAGGGAGGGAGGGGAGGGA
GATGATGCCCTGGGGCATTTCCTGGCGGGGGGGAAGTGGAGGGAGGCGAG
TGAAATTCTCATGAATGTGGTTGCCCCACGCTTGTTGAACGATGACCGAG
GCCAGCAGTTGCGGGTGTTGCTGGGTCGCCTCTTTGCTGCCGATGGGACG
GGTGCTGTTGGTGGTGCAGGTGCGGCGGCAGCGGCGACCAACCGTGGCAA
TAGGGCATTATGGGCCTACTTGGATTTTTTGGAGAACATGCACCGAGAGT
CGATGTCGGTAGAGAGCTTTGCGCGAATGGAAGACGAGCTGGTGGCTATC
CTGCCGAGTTTGGTTCAGGGGGGCAAGGGGGCAGATCGGAACAGCTGCTT
TGCTTGGAGGGGGGAAATTCTTGGGCCGGAGGAAGCGGGGACAGAGAGGG
ATATGTACGCGGTGAGAAGGAGGGAAGGAGTGAGGGAGGAGGAGGAGGAT
TTGGTTCCGCCGCCGTTGCATGCGATTCGGAATATGGTCTTGACGGACAT
TATTAAAAAGATTTACTCGCTGCATCGGGCTCAGGTTAGAGAGGAGGCAG
GGAAGGAGGGTGGATGGGAAGGAAGGGCGAGCCTATTTCCGAGCAAGACG
CAAGTATGTCGGTTGGAGGATATGTGCCAGGATTATGCTTTGCATCAGGT
CAGTTCTCTGACGATTGAATTCATTGCGGCGAACTTGGACGGTGGTGGGG
TGTTCTAG
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protein sequence of NO02G02860.1

>NO02G02860.1-protein ID=NO02G02860.1-protein|Name=NO02G02860.1|organism=Nannochloropsis oceanica|type=polypeptide|length=736bp
MGATLLKEGGREGGKEGYLGPLRVHKEYAQRVQEATATRAPRAALCSWLL
PPSTPGGQHQEQQEQQQQQQQHRIVDLYYHLVQCMHALAREAGGREDETS
RQTWELVNALWGQEGGNKSRPLPLSGSLGGISQALLEGGANHTDWERRRQ
AVCRWLKCAVRVESEGTPLEASGDETADLHAVLELMKSHRITEAATLAAQ
SGFLRLATLIPLAGHRPGIDMMRHQEALRLQLQESGLAAIFGLLSGVGSE
GEGRKEGGGLDWMRRLGEYLWFATGNLPTGGGGGGAETDRLIAAIEEFNE
KMPSPPLPGWLRKRWEGGRGGWHDARVGPNSLFFDLLQMYRSEAYPLALL
LDPRGLTENERDYRMSWLLLTLLGALGVVPPGTGEGGKKGVGEGGGGGAA
AAEIWQQVTSSLVFQLVSVGMWEWAVYVLMHAPETPARTRSIRELVGRFG
WGCVRGGEEWSFLVDELGLPFEWLEEARATWLRSEGVLFLDEGGREGGEG
DDALGHFLAGGKWREASEILMNVVAPRLLNDDRGQQLRVLLGRLFAADGT
GAVGGAGAAAAATNRGNRALWAYLDFLENMHRESMSVESFARMEDELVAI
LPSLVQGGKGADRNSCFAWRGEILGPEEAGTERDMYAVRRREGVREEEED
LVPPPLHAIRNMVLTDIIKKIYSLHRAQVREEAGKEGGWEGRASLFPSKT
QVCRLEDMCQDYALHQVSSLTIEFIAANLDGGGVF*
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Synonyms
Publications