NO02G02280, NO02G02280 (gene) Nannochloropsis oceanica

Overview
NameNO02G02280
Unique NameNO02G02280
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1020
Alignment locationchr2:640173..641192 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:640173..641192 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR011047Quinonprotein_ADH-like_supfam
Homology
The following BLAST results are available for this feature:
BLAST of NO02G02280 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL016nonsL016Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR032ncniR032Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR002ngnoR002Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR000ngnoR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO02G02280.1NO02G02280.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO02G02280.1NO02G02280.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO02G02280 ID=NO02G02280|Name=NO02G02280|organism=Nannochloropsis oceanica|type=gene|length=1020bp
CAGTACAACACAGGCAGAAGCATGAGAGTAATCCCGCCATTGCCACCCTT
CCTCTTCGAGCACGGCAAGGAGACAGGGTATCGTCTGTGTGCCGTGCCCT
TGGCCGCTGCGACTCCTCAAGCCACCATAGAGCTGGCGCGGGCTTTACCA
GGAGGAGATCTGCTGGCCTTGGTGGACCACGCTGGATGCTTGCGCGTTTT
AGAGGTGAGGACACAGACCGTGATTGCTGTGTATCAAATATACCGGGGCA
GCTTTTTGGAAGAGGAGGAAGGGGGGAGGGGGAAAGAGGAGGAACGACTT
GGCGCAGCAAAGGCATTATCAACCAGAGTGCGGCCACCGGGGCCTTGCTC
CTTGCCCTGGACCGACCTCACCTTTGTGCCAGGGCGAGAAGATGCCCTTT
TCCTGCTCCTGGGCGAGACTCACGTCGTGATGTACACCACCTTGCCACCA
CCGTTGGACCCAGAAGACTTGCAAGGACAGGGCCCTCGGGCCTCGGCGTC
CTTTGCCTACGGCTCCCCACTCATCGTCTTGAGGCCAGAAACAGCAGCCG
CAGCAGCTGCAGCAGCAACACCAGCGCGCATTCGCACAGTGGGCGTGGAT
ACCACGGGGTCAGTTTTGGCCAGCGGGGACGATGAAGGCTGCTTGTGCGT
GTGGACTTTATCGAAACGCCGTCATTTCGGCCTGGAGGCACCTCTCCTCT
CTGGTGGTGACTCACCAACATCCACAGGGGGGAAACGAAGGGGTATCGTC
AATGTAGTCAGTGCGCATGATGGGCCTCTTTTGAAGTTGGCGCATGGAGA
GGCCTTGGCACGGGAGGAAGGGCATTTGATTACCGGAGGGGGGGATCGAA
CAGTCAAGATTTGGTCTTGGCGAATGGACGAGTGGGGGGCGTTGGTCGTC
AGAAAACTCCACACCCTCCTGACTGAAGCGTGTGATGTCCGTGGCCTGGC
GGCCGGGGGGGATGGGGGGCTGATTTTGGGGGGGGGGGTAGTGGGACATT
ATATTGTTGGTCGAGCTTGA
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protein sequence of NO02G02280.1

>NO02G02280.1-protein ID=NO02G02280.1-protein|Name=NO02G02280.1|organism=Nannochloropsis oceanica|type=polypeptide|length=333bp
MRVIPPLPPFLFEHGKETGYRLCAVPLAAATPQATIELARALPGGDLLAL
VDHAGCLRVLEVRTQTVIAVYQIYRGSFLEEEEGGRGKEEERLGAAKALS
TRVRPPGPCSLPWTDLTFVPGREDALFLLLGETHVVMYTTLPPPLDPEDL
QGQGPRASASFAYGSPLIVLRPETAAAAAAAATPARIRTVGVDTTGSVLA
SGDDEGCLCVWTLSKRRHFGLEAPLLSGGDSPTSTGGKRRGIVNVVSAHD
GPLLKLAHGEALAREEGHLITGGGDRTVKIWSWRMDEWGALVVRKLHTLL
TEACDVRGLAAGGDGGLILGGGVVGHYIVGRA*
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Synonyms
Publications