NO02G02280.1, NO02G02280.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO02G02280.1
Unique NameNO02G02280.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1020
Alignment locationchr2:640173..641192 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:640173..641192 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO02G02280.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO02G02280NO02G02280Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO02G02280.1NO02G02280.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO02G02280.1.cds1NO02G02280.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO02G02280.1 ID=NO02G02280.1|Name=NO02G02280.1|organism=Nannochloropsis oceanica|type=mRNA|length=1020bp
CAGTACAACACAGGCAGAAGCATGAGAGTAATCCCGCCATTGCCACCCTT
CCTCTTCGAGCACGGCAAGGAGACAGGGTATCGTCTGTGTGCCGTGCCCT
TGGCCGCTGCGACTCCTCAAGCCACCATAGAGCTGGCGCGGGCTTTACCA
GGAGGAGATCTGCTGGCCTTGGTGGACCACGCTGGATGCTTGCGCGTTTT
AGAGGTGAGGACACAGACCGTGATTGCTGTGTATCAAATATACCGGGGCA
GCTTTTTGGAAGAGGAGGAAGGGGGGAGGGGGAAAGAGGAGGAACGACTT
GGCGCAGCAAAGGCATTATCAACCAGAGTGCGGCCACCGGGGCCTTGCTC
CTTGCCCTGGACCGACCTCACCTTTGTGCCAGGGCGAGAAGATGCCCTTT
TCCTGCTCCTGGGCGAGACTCACGTCGTGATGTACACCACCTTGCCACCA
CCGTTGGACCCAGAAGACTTGCAAGGACAGGGCCCTCGGGCCTCGGCGTC
CTTTGCCTACGGCTCCCCACTCATCGTCTTGAGGCCAGAAACAGCAGCCG
CAGCAGCTGCAGCAGCAACACCAGCGCGCATTCGCACAGTGGGCGTGGAT
ACCACGGGGTCAGTTTTGGCCAGCGGGGACGATGAAGGCTGCTTGTGCGT
GTGGACTTTATCGAAACGCCGTCATTTCGGCCTGGAGGCACCTCTCCTCT
CTGGTGGTGACTCACCAACATCCACAGGGGGGAAACGAAGGGGTATCGTC
AATGTAGTCAGTGCGCATGATGGGCCTCTTTTGAAGTTGGCGCATGGAGA
GGCCTTGGCACGGGAGGAAGGGCATTTGATTACCGGAGGGGGGGATCGAA
CAGTCAAGATTTGGTCTTGGCGAATGGACGAGTGGGGGGCGTTGGTCGTC
AGAAAACTCCACACCCTCCTGACTGAAGCGTGTGATGTCCGTGGCCTGGC
GGCCGGGGGGGATGGGGGGCTGATTTTGGGGGGGGGGGTAGTGGGACATT
ATATTGTTGGTCGAGCTTGA
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protein sequence of NO02G02280.1

>NO02G02280.1-protein ID=NO02G02280.1-protein|Name=NO02G02280.1|organism=Nannochloropsis oceanica|type=polypeptide|length=333bp
MRVIPPLPPFLFEHGKETGYRLCAVPLAAATPQATIELARALPGGDLLAL
VDHAGCLRVLEVRTQTVIAVYQIYRGSFLEEEEGGRGKEEERLGAAKALS
TRVRPPGPCSLPWTDLTFVPGREDALFLLLGETHVVMYTTLPPPLDPEDL
QGQGPRASASFAYGSPLIVLRPETAAAAAAAATPARIRTVGVDTTGSVLA
SGDDEGCLCVWTLSKRRHFGLEAPLLSGGDSPTSTGGKRRGIVNVVSAHD
GPLLKLAHGEALAREEGHLITGGGDRTVKIWSWRMDEWGALVVRKLHTLL
TEACDVRGLAAGGDGGLILGGGVVGHYIVGRA*
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mRNA from alignment at chr2:640173..641192-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO02G02280.1 ID=NO02G02280.1|Name=NO02G02280.1|organism=Nannochloropsis oceanica|type=mRNA|length=1020bp|location=Sequence derived from alignment at chr2:640173..641192- (Nannochloropsis oceanica)
CAGTACAACACAGGCAGAAGCATGAGAGTAATCCCGCCATTGCCACCCTT
CCTCTTCGAGCACGGCAAGGAGACAGGGTATCGTCTGTGTGCCGTGCCCT
TGGCCGCTGCGACTCCTCAAGCCACCATAGAGCTGGCGCGGGCTTTACCA
GGAGGAGATCTGCTGGCCTTGGTGGACCACGCTGGATGCTTGCGCGTTTT
AGAGGTGAGGACACAGACCGTGATTGCTGTGTATCAAATATACCGGGGCA
GCTTTTTGGAAGAGGAGGAAGGGGGGAGGGGGAAAGAGGAGGAACGACTT
GGCGCAGCAAAGGCATTATCAACCAGAGTGCGGCCACCGGGGCCTTGCTC
CTTGCCCTGGACCGACCTCACCTTTGTGCCAGGGCGAGAAGATGCCCTTT
TCCTGCTCCTGGGCGAGACTCACGTCGTGATGTACACCACCTTGCCACCA
CCGTTGGACCCAGAAGACTTGCAAGGACAGGGCCCTCGGGCCTCGGCGTC
CTTTGCCTACGGCTCCCCACTCATCGTCTTGAGGCCAGAAACAGCAGCCG
CAGCAGCTGCAGCAGCAACACCAGCGCGCATTCGCACAGTGGGCGTGGAT
ACCACGGGGTCAGTTTTGGCCAGCGGGGACGATGAAGGCTGCTTGTGCGT
GTGGACTTTATCGAAACGCCGTCATTTCGGCCTGGAGGCACCTCTCCTCT
CTGGTGGTGACTCACCAACATCCACAGGGGGGAAACGAAGGGGTATCGTC
AATGTAGTCAGTGCGCATGATGGGCCTCTTTTGAAGTTGGCGCATGGAGA
GGCCTTGGCACGGGAGGAAGGGCATTTGATTACCGGAGGGGGGGATCGAA
CAGTCAAGATTTGGTCTTGGCGAATGGACGAGTGGGGGGCGTTGGTCGTC
AGAAAACTCCACACCCTCCTGACTGAAGCGTGTGATGTCCGTGGCCTGGC
GGCCGGGGGGGATGGGGGGCTGATTTTGGGGGGGGGGGTAGTGGGACATT
ATATTGTTGGTCGAGCTTGA
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Coding sequence (CDS) from alignment at chr2:640173..641192-

>NO02G02280.1 ID=NO02G02280.1|Name=NO02G02280.1|organism=Nannochloropsis oceanica|type=CDS|length=999bp|location=Sequence derived from alignment at chr2:640173..641192- (Nannochloropsis oceanica)
ATGAGAGTAATCCCGCCATTGCCACCCTTCCTCTTCGAGCACGGCAAGGA
GACAGGGTATCGTCTGTGTGCCGTGCCCTTGGCCGCTGCGACTCCTCAAG
CCACCATAGAGCTGGCGCGGGCTTTACCAGGAGGAGATCTGCTGGCCTTG
GTGGACCACGCTGGATGCTTGCGCGTTTTAGAGGTGAGGACACAGACCGT
GATTGCTGTGTATCAAATATACCGGGGCAGCTTTTTGGAAGAGGAGGAAG
GGGGGAGGGGGAAAGAGGAGGAACGACTTGGCGCAGCAAAGGCATTATCA
ACCAGAGTGCGGCCACCGGGGCCTTGCTCCTTGCCCTGGACCGACCTCAC
CTTTGTGCCAGGGCGAGAAGATGCCCTTTTCCTGCTCCTGGGCGAGACTC
ACGTCGTGATGTACACCACCTTGCCACCACCGTTGGACCCAGAAGACTTG
CAAGGACAGGGCCCTCGGGCCTCGGCGTCCTTTGCCTACGGCTCCCCACT
CATCGTCTTGAGGCCAGAAACAGCAGCCGCAGCAGCTGCAGCAGCAACAC
CAGCGCGCATTCGCACAGTGGGCGTGGATACCACGGGGTCAGTTTTGGCC
AGCGGGGACGATGAAGGCTGCTTGTGCGTGTGGACTTTATCGAAACGCCG
TCATTTCGGCCTGGAGGCACCTCTCCTCTCTGGTGGTGACTCACCAACAT
CCACAGGGGGGAAACGAAGGGGTATCGTCAATGTAGTCAGTGCGCATGAT
GGGCCTCTTTTGAAGTTGGCGCATGGAGAGGCCTTGGCACGGGAGGAAGG
GCATTTGATTACCGGAGGGGGGGATCGAACAGTCAAGATTTGGTCTTGGC
GAATGGACGAGTGGGGGGCGTTGGTCGTCAGAAAACTCCACACCCTCCTG
ACTGAAGCGTGTGATGTCCGTGGCCTGGCGGCCGGGGGGGATGGGGGGCT
GATTTTGGGGGGGGGGGTAGTGGGACATTATATTGTTGGTCGAGCTTGA
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Synonyms
Publications