NO02G02020, NO02G02020 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO02G02020 vs. NCBI_GenBank
Match: EWM30447.1 (cop9 signalosome complex subunit 7a [Nannochloropsis gaditana]) HSP 1 Score: 306.2 bits (783), Expect = 1.100e-79 Identity = 193/293 (65.87%), Postives = 224/293 (76.45%), Query Frame = 0 Query: 1 MNSDAGAGALEQFTILAKGTKGNGCAALIQQVLSTRKIVVFGELLAMQSMQALRGTEHEPSLKLLEIFAYGTYADYQNQRTTANLPELTTPQLRKLRLLTMLTLAHKHESIPYATLFQALGLDGNVREVEDLIIEAIYMGFLSGRLDQRRGLFRVKGAVGRDVRLEDVEGMIGKLRKWLGNAEMLLENFEERMRDIHAGRAELQQQRHKYVQQFEQVKTQLNTGVQPYRGGXXXXXXXXXXXXXXXXXXXEAFFXXXXXXXXXXXXXXXRKSAAEGRFKRKSNREPTSRPRNK 294 MNSDAGAGALEQFTILAK KGN C ALIQQVLSTRKIVVFGELLAM +++ALRG+EHEP L+LLEIFAYGTYADYQ QR T LP LT PQLRKL+ LT++TLA KHE+IPYA LF+ L +DG+VRE+EDLIIE+I MG L+GRLDQR G FR+KGA+GRDVRLED++GM+ KL+KW+ NAE LL + E+RM +IH R EL QQR Y ++ + K P R XXXXXXXXXXXXXXXXXXXE+F RK A+EGR+KRK REP SR RNK Sbjct: 1 MNSDAGAGALEQFTILAKSAKGNACVALIQQVLSTRKIVVFGELLAMPNLEALRGSEHEPYLRLLEIFAYGTYADYQRQRGT--LPPLTPPQLRKLQQLTLVTLAQKHENIPYAVLFRELDMDGDVRELEDLIIESINMGLLTGRLDQRGGRFRIKGAIGRDVRLEDIDGMMDKLQKWVANAETLLTSLEQRMSEIHDERCELDQQRQDYKEKLQHAK------AHPVR-XXXXXXXXXXXXXXXXXXXXESFL-------TAGASGGRRKVASEGRYKRKGVREPMSRMRNK 277
BLAST of NO02G02020 vs. NCBI_GenBank
Match: ETI37498.1 (hypothetical protein F443_16529 [Phytophthora parasitica P1569]) HSP 1 Score: 174.5 bits (441), Expect = 4.900e-40 Identity = 93/183 (50.82%), Postives = 126/183 (68.85%), Query Frame = 0 Query: 5 AGAGALEQFTILAKGTKGNGCAALIQQVLSTRKIVVFGELLAMQSMQALRGTEHEPSLKLLEIFAYGTYADYQNQRTTANLPELTTPQLRKLRLLTMLTLAHKHESIPYATLFQALGLDGNVREVEDLIIEAIYMGFLSGRLDQRRGLFRVKGAVGRDVRLEDVEGMIGKLRKWLGNAEMLLE 188 AGA LEQFT+LAK +G C ALIQQVLS +K+ VF ELL M +++AL+ +EH +LL IF++GTY DY ++ LP+LT Q+ KLR LT+++LAH+ ++IPY TL Q LG+ VREVED++I+ IY G + G+LDQ+ F VK AVGRD R ED++ MI KL W + + E Sbjct: 6 AGAAGLEQFTLLAKNARGRACVALIQQVLSNKKLFVFRELLDMPNVEALKDSEHMEHYELLRIFSFGTYNDYLARKD--ELPDLTPQQMNKLRKLTVVSLAHRFKNIPYDTLIQDLGV-STVREVEDILIDTIYSGLVQGKLDQKSRCFVVKYAVGRDTRHEDIDDMIQKLSNWKAQSAEICE 185
BLAST of NO02G02020 vs. NCBI_GenBank
Match: ETL31169.1 (hypothetical protein L916_15949 [Phytophthora parasitica]) HSP 1 Score: 174.5 bits (441), Expect = 4.900e-40 Identity = 93/183 (50.82%), Postives = 126/183 (68.85%), Query Frame = 0 Query: 5 AGAGALEQFTILAKGTKGNGCAALIQQVLSTRKIVVFGELLAMQSMQALRGTEHEPSLKLLEIFAYGTYADYQNQRTTANLPELTTPQLRKLRLLTMLTLAHKHESIPYATLFQALGLDGNVREVEDLIIEAIYMGFLSGRLDQRRGLFRVKGAVGRDVRLEDVEGMIGKLRKWLGNAEMLLE 188 AGA LEQFT+LAK +G C ALIQQVLS +K+ VF ELL M +++AL+ +EH +LL IF++GTY DY ++ LP+LT Q+ KLR LT+++LAH+ ++IPY TL Q LG+ VREVED++I+ IY G + G+LDQ+ F VK AVGRD R ED++ MI KL W + + E Sbjct: 6 AGAAGLEQFTLLAKNARGRACVALIQQVLSNKKLFVFRELLDMPNVEALKDSEHMEHYELLRIFSFGTYNDYLARKD--ELPDLTPQQMNKLRKLTVVSLAHRFKNIPYDTLIQDLGV-STVREVEDILIDTIYSGLVQGKLDQKSRCFVVKYAVGRDTRHEDIDDMIQKLSNWKAQSAEICE 185
BLAST of NO02G02020 vs. NCBI_GenBank
Match: XP_008911722.1 (hypothetical protein PPTG_16135 [Phytophthora parasitica INRA-310] >ETL84409.1 hypothetical protein L917_15750 [Phytophthora parasitica] >ETM37602.1 hypothetical protein L914_15884 [Phytophthora parasitica] >ETN03178.1 hypothetical protein PPTG_16135 [Phytophthora parasitica INRA-310] >ETP07380.1 hypothetical protein F441_16340 [Phytophthora parasitica CJ01A1] >ETP35430.1 hypothetical protein F442_16366 [Phytophthora parasitica P10297]) HSP 1 Score: 174.5 bits (441), Expect = 4.900e-40 Identity = 93/183 (50.82%), Postives = 126/183 (68.85%), Query Frame = 0 Query: 5 AGAGALEQFTILAKGTKGNGCAALIQQVLSTRKIVVFGELLAMQSMQALRGTEHEPSLKLLEIFAYGTYADYQNQRTTANLPELTTPQLRKLRLLTMLTLAHKHESIPYATLFQALGLDGNVREVEDLIIEAIYMGFLSGRLDQRRGLFRVKGAVGRDVRLEDVEGMIGKLRKWLGNAEMLLE 188 AGA LEQFT+LAK +G C ALIQQVLS +K+ VF ELL M +++AL+ +EH +LL IF++GTY DY ++ LP+LT Q+ KLR LT+++LAH+ ++IPY TL Q LG+ VREVED++I+ IY G + G+LDQ+ F VK AVGRD R ED++ MI KL W + + E Sbjct: 6 AGAAGLEQFTLLAKNARGRACVALIQQVLSNKKLFVFRELLDMPNVEALKDSEHMEHYELLRIFSFGTYNDYLARKD--ELPDLTPQQMNKLRKLTVVSLAHRFKNIPYDTLIQDLGV-STVREVEDILIDTIYSGLVQGKLDQKSRCFVVKYAVGRDTRHEDIDDMIQKLSNWKAQSAEICE 185
BLAST of NO02G02020 vs. NCBI_GenBank
Match: KUF78995.1 (ATP-dependent RNA helicase DHX8 [Phytophthora nicotianae]) HSP 1 Score: 174.5 bits (441), Expect = 4.900e-40 Identity = 93/183 (50.82%), Postives = 126/183 (68.85%), Query Frame = 0 Query: 5 AGAGALEQFTILAKGTKGNGCAALIQQVLSTRKIVVFGELLAMQSMQALRGTEHEPSLKLLEIFAYGTYADYQNQRTTANLPELTTPQLRKLRLLTMLTLAHKHESIPYATLFQALGLDGNVREVEDLIIEAIYMGFLSGRLDQRRGLFRVKGAVGRDVRLEDVEGMIGKLRKWLGNAEMLLE 188 AGA LEQFT+LAK +G C ALIQQVLS +K+ VF ELL M +++AL+ +EH +LL IF++GTY DY ++ LP+LT Q+ KLR LT+++LAH+ ++IPY TL Q LG+ VREVED++I+ IY G + G+LDQ+ F VK AVGRD R ED++ MI KL W + + E Sbjct: 6 AGAAGLEQFTLLAKNARGRACVALIQQVLSNKKLFVFRELLDMPNVEALKDSEHMEHYELLRIFSFGTYNDYLARKD--ELPDLTPQQMNKLRKLTVVSLAHRFKNIPYDTLIQDLGV-STVREVEDILIDTIYSGLVQGKLDQKSRCFVVKYAVGRDTRHEDIDDMIQKLSNWKAQSAEICE 185
BLAST of NO02G02020 vs. NCBI_GenBank
Match: ETK77732.1 (hypothetical protein L915_16056 [Phytophthora parasitica]) HSP 1 Score: 173.7 bits (439), Expect = 8.400e-40 Identity = 93/183 (50.82%), Postives = 126/183 (68.85%), Query Frame = 0 Query: 5 AGAGALEQFTILAKGTKGNGCAALIQQVLSTRKIVVFGELLAMQSMQALRGTEHEPSLKLLEIFAYGTYADYQNQRTTANLPELTTPQLRKLRLLTMLTLAHKHESIPYATLFQALGLDGNVREVEDLIIEAIYMGFLSGRLDQRRGLFRVKGAVGRDVRLEDVEGMIGKLRKWLGNAEMLLE 188 AGA LEQFT+LAK +G C ALIQQVLS +K+ VF ELL M +++AL+ +EH +LL IF++GTY DY ++ LP+LT Q+ KLR LT+++LAH+ ++IPY TL Q LG+ VREVED++I+ IY G + G+LDQ+ F VK AVGRD R ED++ MI KL W + + E Sbjct: 6 AGAAGLEQFTLLAKNARGRACVALIQQVLSNKKLFVFRELLDMPNVEALKDSEHMEHYELLRIFSFGTYNDYLARKD--ELPDLTPQQMNKLRKLTVVSLAHRFKNIPYDTLIQDLGV-STVREVEDILIDTIYSGLVLGKLDQKSRCFVVKYAVGRDTRHEDIDDMIQKLSNWKAQSAEICE 185
BLAST of NO02G02020 vs. NCBI_GenBank
Match: ETO66288.1 (hypothetical protein F444_16499 [Phytophthora parasitica P1976]) HSP 1 Score: 173.7 bits (439), Expect = 8.400e-40 Identity = 93/183 (50.82%), Postives = 126/183 (68.85%), Query Frame = 0 Query: 5 AGAGALEQFTILAKGTKGNGCAALIQQVLSTRKIVVFGELLAMQSMQALRGTEHEPSLKLLEIFAYGTYADYQNQRTTANLPELTTPQLRKLRLLTMLTLAHKHESIPYATLFQALGLDGNVREVEDLIIEAIYMGFLSGRLDQRRGLFRVKGAVGRDVRLEDVEGMIGKLRKWLGNAEMLLE 188 AGA LEQFT+LAK +G C ALIQQVLS +K+ VF ELL M +++AL+ +EH +LL IF++GTY DY ++ LP+LT Q+ KLR LT+++LAH+ ++IPY TL Q LG+ VREVED++I+ IY G + G+LDQ+ F VK AVGRD R ED++ MI KL W + + E Sbjct: 6 AGAAGLEQFTLLAKNARGRACVALIQQVLSNKKLFVFRELLDMPNVEALKDSEHMEHYELLRIFSFGTYNDYLARKD--ELPDLTPQQMNKLRKLTVVSLAHRFKNIPYDTLIQDLGV-STVREVEDILIDTIYSGLVLGKLDQKSRCFVVKYAVGRDTRHEDIDDMIQKLSNWKAQSAEICE 185
BLAST of NO02G02020 vs. NCBI_GenBank
Match: XP_009038757.1 (hypothetical protein AURANDRAFT_69877 [Aureococcus anophagefferens] >EGB06582.1 hypothetical protein AURANDRAFT_69877 [Aureococcus anophagefferens]) HSP 1 Score: 172.9 bits (437), Expect = 1.400e-39 Identity = 98/205 (47.80%), Postives = 131/205 (63.90%), Query Frame = 0 Query: 3 SDAGAGALEQFTILAKGTKGNGCAALIQQVLSTRKIVVFGELLAMQSMQALRGTEHEPSLKLLEIFAYGTYADYQNQRTTANLPELTTPQLRKLRLLTMLTLAHKHESIPYATLFQALGLDGNVREVEDLIIEAIYMGFLSGRLDQRRGLFRVKGAVGRDVRLEDVEGMIGKLRKWLGNAEMLLENFEERMRDIHAGRAELQQQR 208 ++ G+ ALEQF +LAK KG +IQQ LS+++I VFGELLAM S+QALRGTEH P L LLEIFA+GTY DY+ + +P LT QL KLR L++++LA + + YAT+ + L +D NVR++ED IIE IY G LSG++DQ FRV A GRDV+L+ V + KL W A L EE A R + + ++ Sbjct: 2 AEDGSQALEQFCLLAKSAKGRAVVGIIQQTLSSKRIYVFGELLAMPSVQALRGTEHAPHLDLLEIFAFGTYGDYRAKGDA--MPPLTPAQLTKLRQLSLVSLARESAVVAYATMQEELAVD-NVRDLEDAIIETIYAGLLSGKMDQMSAEFRVAKAAGRDVKLDAVGDLAAKLEAWAATAGQLSAELEENKASAKAMRDQRKDEQ 203
BLAST of NO02G02020 vs. NCBI_GenBank
Match: XP_008869451.1 (hypothetical protein H310_06242 [Aphanomyces invadans] >ETW01603.1 hypothetical protein H310_06242 [Aphanomyces invadans]) HSP 1 Score: 159.1 bits (401), Expect = 2.100e-35 Identity = 86/200 (43.00%), Postives = 130/200 (65.00%), Query Frame = 0 Query: 8 GALEQFTILAKGTKGNGCAALIQQVLSTRKIVVFGELLAMQSMQALRGT---EHEPSLKLLEIFAYGTYADY--QNQRTTANLPELTTPQLRKLRLLTMLTLAHKHESIPYATLFQALGLDGNVREVEDLIIEAIYMGFLSGRLDQRRGLFRVKGAVGRDVRLEDVEGMIGKLRKWLGNAEMLLENFEERMRDIHAGRAE 203 G+LEQFT+LAK +G C AL+QQVLS +K+ VFGELL M +++AL + + + +LL IFA+G Y DY Q Q T ++P+L Q KLR LT+++L +H+S+PY L L + G+VREVED++I+ IY G + G+LD++ +F +VGRDV+L D++ MI +L +W +A+ + +E + HA E Sbjct: 7 GSLEQFTLLAKTARGRACVALVQQVLSNKKLFVFGELLDMPNVKALAESDQADQQGHARLLAIFAHGRYLDYVRQKQEATFHIPDLNAAQALKLRKLTVVSLCQEHKSVPYRILMGELQI-GSVREVEDIVIDTIYSGLVEGQLDEKNEVFESSYSVGRDVQLSDIDDMIHRLTQWQNDAKQMCNRIDEVLS--HAAAVE 203
BLAST of NO02G02020 vs. NCBI_GenBank
Match: KUF96670.1 (Isochorismatase domain-containing protein 2 [Phytophthora nicotianae]) HSP 1 Score: 159.1 bits (401), Expect = 2.100e-35 Identity = 90/183 (49.18%), Postives = 118/183 (64.48%), Query Frame = 0 Query: 5 AGAGALEQFTILAKGTKGNGCAALIQQVLSTRKIVVFGELLAMQSMQALRGTEHEPSLKLLEIFAYGTYADYQNQRTTANLPELTTPQLRKLRLLTMLTLAHKHESIPYATLFQALGLDGNVREVEDLIIEAIYMGFLSGRLDQRRGLFRVKGAVGRDVRLEDVEGMIGKLRKWLGNAEMLLE 188 AGA LEQFT+LAK +G C ALIQQVLS +K+ VF ELL M +++AL+ +EH +LL IF++GTY DY ++ LP+LT Q+ KLR LT +IPY TL Q LG+ VREVED++I+ IY G + G+LDQ+ F VK AVGRD R ED++ MI KL W + + E Sbjct: 6 AGAAGLEQFTLLAKNARGRACVALIQQVLSNKKLFVFRELLDMPNVEALKDSEHMEHYELLRIFSFGTYNDYLARKD--ELPDLTPQQMNKLRKLT---------NIPYDTLIQDLGV-STVREVEDILIDTIYSGLVQGKLDQKSRCFVVKYAVGRDTRHEDIDDMIQKLSNWKAQSAEICE 176 The following BLAST results are available for this feature:
BLAST of NO02G02020 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G02020 ID=NO02G02020|Name=NO02G02020|organism=Nannochloropsis oceanica|type=gene|length=1793bpback to top protein sequence of NO02G02020.1 >NO02G02020.1-protein ID=NO02G02020.1-protein|Name=NO02G02020.1|organism=Nannochloropsis oceanica|type=polypeptide|length=294bpback to top Synonyms
Publications
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