NO02G01980, NO02G01980 (gene) Nannochloropsis oceanica

Overview
NameNO02G01980
Unique NameNO02G01980
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1439
Alignment locationchr2:565300..566738 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:565300..566738 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO02G01980 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL020nonsL020Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL016nonsL016Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR032ncniR032Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR005ngnoR005Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR002ngnoR002Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR000ngnoR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO02G01980.1NO02G01980.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO02G01980.1NO02G01980.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO02G01980 ID=NO02G01980|Name=NO02G01980|organism=Nannochloropsis oceanica|type=gene|length=1439bp
ATGGGGCACGTTCCCTTGGCGGCATCGCACCCGCCGGCATCTCGAGCACC
TCGAACAGCAGCAGAATCGTCAACAACAGCAGGACCTACACGTGTGCAAC
GTCCTCGTCCTGGTGGTGCTTCGCGGCAGATGCCACTCGAAGAAGAGAAG
GAAGAGGAGGAGGAGCAGGAGAAGGAAGACATACGAGGAGTCACTGGGAC
AACGTGGCAAGACATGGAGGAGAAGGTAGCGCGAATTGAGAAGCAGCGGG
AGGTGGATGAGGAGGAAGAAGCGGAGGAGGAAGGGGAGGGAGGGGCAGCT
GAGTCATCTTCCGTCGCCTTGCTAGGACGCGGGCGACGTTTCGGGCGAGG
AGAGAAGCAAGAAGAGGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGGAG
AGACGGGCGTATTTTCATCATTATCGTCCACAGCGGAGCTTGAGCGAGAG
ATTGAAAGCATGAGAAAGAGCTTGGAGGAAGTTGCGCGATCGTTGCGTGG
TCGGTCGATGTTTGATCCCAAGTTAGATGCATTGATAGAACAACGTCGCC
AGCTTCAGAAAGCGATGAAATTCTCTCGAGGGCTACAGGAGACTGCCAGC
AGCAGCAGCAGCAGCAGCAGCAGCAGTAGTAGTAGTAGTAGTAGTAGTAG
TAGCACCAGCGGGGTCCGGGGAAGTGAAAAGAGCGCTGTGCTTTCGGGGG
TTGGAGGTGGTGATGATGATGCTGCTCCGGCAGGGAGAGAAATGGGTGGC
GTGATTACTGCTGCTCGTGTCGCGCGCCGTGCGGAGGATACAGGGGCGAT
GCGGACGCAGCCAGTCTTTATTCGGGGAGGGTTGAAAGGGTTGTCATACT
ACCAGGAGGTAGAAGAGGAGGAAGGGGTGGGCGCTGGGACACGACTCTTG
CATGGTGGGAGACTGCAGCAACACTCTGTCGGTGGGTATGGGAGAAGAGA
GAAAGTGGAAGAGAAGGAGGAGGAGGAAGTAGAGGAAGAAGGGATGGATG
AACAGTCCATTTCTTACACTGAGATGGATCTAAGCTTGAGCGCGCGGCAA
CTTCGAGCAGGGAATgtaggtagggagggaggggggagagatctgcttat
tcctcattattcctggaaaagcagTACGTGGAGGGAGAAAAGGAGGAGGA
TGAAGAAGAGGAAGAGGGAGGAGGACGTGTGGAGCTTTCGGTCGATCGTA
TTGTGCAAGGCTATCAACAACGACGACAAGAGTTGGTGCGTCGTTTGGAA
GCACGACGACGGCAAGTCCAAGGGGCCTCTTCTTTCCTTCCTTCGGCTCC
ACCTGCTCGCCCTTCGTCGCCTCGTCCTGTCGGCATTATGGCGCCCTCGG
CGCGGTCTCAGATGGAGCGCACGCGTCTGCTTCAACTGTTACGGCAACGG
GAGGCACGTGTTAGAGGTGCAGGGGTATCGCGGCTGTAG
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protein sequence of NO02G01980.1

>NO02G01980.1-protein ID=NO02G01980.1-protein|Name=NO02G01980.1|organism=Nannochloropsis oceanica|type=polypeptide|length=460bp
MGHVPLAASHPPASRAPRTAAESSTTAGPTRVQRPRPGGASRQMPLEEEK
EEEEEQEKEDIRGVTGTTWQDMEEKVARIEKQREVDEEEEAEEEGEGGAA
ESSSVALLGRGRRFGRGEKQEEEEEEEEEEEEGETGVFSSLSSTAELERE
IESMRKSLEEVARSLRGRSMFDPKLDALIEQRRQLQKAMKFSRGLQETAS
SSSSSSSSSSSSSSSSSSTSGVRGSEKSAVLSGVGGGDDDAAPAGREMGG
VITAARVARRAEDTGAMRTQPVFIRGGLKGLSYYQEVEEEEGVGAGTRLL
HGGRLQQHSVGGYGRREKVEEKEEEEVEEEGMDEQSISYTEMDLSLSARQ
LRAGNYVEGEKEEDEEEEEGGGRVELSVDRIVQGYQQRRQELVRRLEARR
RQVQGASSFLPSAPPARPSSPRPVGIMAPSARSQMERTRLLQLLRQREAR
VRGAGVSRL*
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Synonyms
Publications