NO02G01830, NO02G01830 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO02G01830 vs. NCBI_GenBank
Match: EWM30515.1 (dhhc zinc finger domain containing protein [Nannochloropsis gaditana]) HSP 1 Score: 387.5 bits (994), Expect = 3.600e-104 Identity = 190/259 (73.36%), Postives = 217/259 (83.78%), Query Frame = 0 Query: 5 DLAFSTALVVACLSSFVVACSIPAGTITPSSWPTFDNYKADEIIYASGKECVTCKVPKLARSKHCRLCGVCQSRFDHHCGWLNQCVGELNYRHFLFFLALHSMTFFWGSSCLWEVLRKEMAEKQLWEAKFYSPSSGATVGATPVVVLQYLVVHEGAVCGVLALCFVMAVVLAGFLLYHLRLALRNITTNESFKWSAVRAHAKLARDHARRAHEASGGALPLRQIADPQNSYHISFVDNLKEVFFPRCERPCTGS-GRKA 263 DLA S ALV+ACL+SFVVACS+PAGTI+PS+W +DNYK D +IY +G+ C TC V KLARSKHCRLCGVCQSRFDHHCGWLNQCVGE+NYRHFLFFLALHS TF +GSS LW +LR+EM + +LW+A FYSPSSG TVG++P+VV QYLVVHEGAVCGVLAL FVMA+VLAGFLLYHL LA +N TTNE+FKW+ VR K+ R ARRAHEASGGALPLR+IADP NSY+IS +NL EV FPR ER S GRKA Sbjct: 105 DLALSVALVLACLASFVVACSVPAGTISPSTWERYDNYKPDNVIYVAGRVCPTCDVVKLARSKHCRLCGVCQSRFDHHCGWLNQCVGEVNYRHFLFFLALHSCTFLYGSSRLWGILRREMIKNKLWDATFYSPSSGQTVGSSPLVVCQYLVVHEGAVCGVLALAFVMAIVLAGFLLYHLWLAGQNTTTNETFKWAEVRLKVKIERSQARRAHEASGGALPLRRIADPVNSYNISLYENLMEVLFPRSERRAQNSTGRKA 363
BLAST of NO02G01830 vs. NCBI_GenBank
Match: XP_002287351.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED94794.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 152.1 bits (383), Expect = 2.600e-33 Identity = 100/273 (36.63%), Postives = 147/273 (53.85%), Query Frame = 0 Query: 11 ALVVACLSSFVVACSIPAGTITPSSWPTFDNYKADEIIYASGKECVTCKVPKLARSKHCRLCGVCQSRFDHHCGWLNQCVGELNYRHFLFFLALHSMTFFWGSSCLWEVLRKEMAEKQLWEAKFYSPSSGATVGATPVVVLQYLVVHEGAVCGVLALCFVMAVVLAGFLLYHLRLALRNITTNESFKWSAVRA-HAKLARDHARRAHEASGGALPLRQIADPQNSYHISFVDNLKEVFFPRCERPCTG-------SGRKAGGTAAAGGGPKPE 276 A+ AC+SS+ AC G++T + +D+Y D I+Y + K+C T + K+ARSK+ R RFDH CGWLNQ VGELNYR FL FL +H ++G+ + VL E+ +K L A F++ +G V A ++V Y+++ +CGVL L VM+V+L+ FL +HL + RN+TTNE FKW AVR H K+ + + E G + + S SF + + +V + CTG S +KA GP P+ Sbjct: 106 AVFAACMSSWHYACHTSPGSVTSRTIALYDHYPYDSILYYN-KQCPTLNIRKVARSKYDRFSKQHVPRFDHFCGWLNQAVGELNYRWFLLFLMVHVGMCYYGTWAMGTVLYGEVVDKNLLNATFFNAVTGTEVNADYIIVFHYMMMRYFEICGVLLLMTVMSVMLSIFLGFHLYITARNMTTNEYFKWKAVRRWHKKMKQKYEETEKEGRFGRTNTEESSSRDGS---SFSEQVSDV-----DVGCTGPASAVKPSKQKAVDDDCFDPGPMPK 369
BLAST of NO02G01830 vs. NCBI_GenBank
Match: XP_009040638.1 (hypothetical protein AURANDRAFT_72462 [Aureococcus anophagefferens] >EGB04724.1 hypothetical protein AURANDRAFT_72462 [Aureococcus anophagefferens]) HSP 1 Score: 146.4 bits (368), Expect = 1.400e-31 Identity = 92/263 (34.98%), Postives = 138/263 (52.47%), Query Frame = 0 Query: 15 ACLSSFVVACSIPAGTITPS-SWPTFDNYKADEIIYASGKECVTCKVPKLARSKHCRLCGVCQSRFDHHCGWLNQCVGELNYRHFLFFLALHSMTFFWGSSCLWEVLRKEMAEKQLWEAKFYSPSSGATVGATPVVVLQYLVVHEGAVCGVLALCFVMAVVLAGFLLYHLRLALRNITTNESFKWSA-----------VRAHAKLA------------RDHARRAHEASGGALPLRQIADPQNSYHISFVDNLKEVFFPRCER 254 +CL+SFV A + G I + + +NY D +++ K C T V K+ARSK+C +RFDH C W+N +GE NYR FL FL+ H++ +G+ C+ +L + + L+ KFY P +G T+ ++ ++VLQYL+ E A+CG+LA+C +MA V+ FL YH+ L TTNE KWS + A+A A R+ A + A + + P N Y+ F+ N+ EV FPR R Sbjct: 105 SCLTSFVAASTREPGYIVDNETVAKHENYAYDCMLFWPNKVCPTANVCKIARSKYCATTKCNIARFDHFCPWVNNAIGEENYRVFLLFLSCHAVLLCYGAICISLILYDLILIEDLFNVKFYDPRTGTTMTSSKLLVLQYLITAERALCGLLAICVIMAAVVTAFLAYHIWLVKLGQTTNERHKWSVLAKARERPNPEILANAPTAAKEPPVPRYYLDRNSASVDGANNSKAFNVDWMISPVNVYNRGFLLNIHEVLFPRSLR 367
BLAST of NO02G01830 vs. NCBI_GenBank
Match: KOO23340.1 (putative s-acyltransferase [Chrysochromulina sp. CCMP291]) HSP 1 Score: 140.6 bits (353), Expect = 7.800e-30 Identity = 83/247 (33.60%), Postives = 118/247 (47.77%), Query Frame = 0 Query: 20 FVVACSIPAGTITPSSWPTFDNYKADEIIYASGKECVTCKVPKLARSKHCRLCGVCQSRFDHHCGWLNQCVGELNYRHFLFFLALHSMTFFWGSSCLWEVLRKEMAEKQLWEAKFYSPSSGATVGATPVVVLQYLVVHEGAVCGVLALCFVMAVVLAGFLLYHLRLALRNITTNESFKWSAVRAHAKLARDHARRAHEASGGALPLRQIADPQNSYHISFVDNLKEVFFPRCERPCTG--SGRKAGG 265 FV+A G IT ++ F D+++Y + C TC+VP+ ARSKHC +C C +RFDHHC WLN CVGE NYR F+ FL HS+ F+ S ++ + + Y +G T + +QYL VH + C V+ L GF YH+ L TTNE+FKW ++ + H + + G +++ P N Y+ + NL EV P R G R GG Sbjct: 125 FVLASFCDPGVITAANLHRFSRVPYDKVLY-EPRFCRTCQVPRPARSKHCVICNKCVARFDHHCPWLNSCVGERNYRWFMLFLLYHSILCFYSSYIHARIIEHLALDVHRLDQAHYYDETGTPQAVTVLQGVQYLFVHHNMTMAIGIFCLVIGFALWGFWAYHMYLIWCGTTTNETFKWGDLKDELR----HRMQRKQIERGEKVTKKVEVPANIYNQGLLTNLAEVLVPLSSRRANGFAPARSIGG 366
BLAST of NO02G01830 vs. NCBI_GenBank
Match: XP_008861993.1 (hypothetical protein, variant 1 [Aphanomyces invadans] >ETW08188.1 hypothetical protein, variant 1 [Aphanomyces invadans]) HSP 1 Score: 137.1 bits (344), Expect = 8.600e-29 Identity = 80/247 (32.39%), Postives = 126/247 (51.01%), Query Frame = 0 Query: 8 FSTALVVACLSSFVVACSIPAGTITPSSWPTFDNYKADEIIYASGKECVTCKVPKLARSKHCRLCGVCQSRFDHHCGWLNQCVGELNYRHFLFFLALHSMTFFWGSSCLWEVLRKEMAEKQLWEAKFYSPSSGATVGATPVVVLQYLVVHEGAVCGVLALCFVMAVVLAGFLLYHLRLALRNITTNESFKWSAVRAHAKLARDHARRAHEASGGALPLRQIADPQNSYHISFVDNLKEVFFPRCERP 255 F+ + L +F+ A + G +T + + Y DE++Y + C TC+ K ARSKHC +C +C +RFDH WLN CVGE NYR+F+ F+ +++ + + L L E+ QL+E+K+ + ++G AT +V +Y++ VC + +C VM V L F ++H L + N TTNE FK ++ A+A+ A ++ Y S N+ EV FPRC P Sbjct: 110 FTGGAALLALLTFIQASTANPGIVTMRTMAEYQTYNFDEVMYKTANSCKTCRCNKPARSKHCSVCDMCVARFDH--PWLNSCVGERNYRYFVLFILVNAGLCAYSAVVLLYTLLGEVVALQLFESKYINQATGEPTDATVWIVTRYVIYLYPVVCMLFFMCVVMGVALIAFSVFHAYLIVSNRTTNEFFKQRSMTANAQ----------------------ATAKSFYSQSVARNVAEVLFPRCAAP 332
BLAST of NO02G01830 vs. NCBI_GenBank
Match: XP_012198150.1 (hypothetical protein SPRG_04154 [Saprolegnia parasitica CBS 223.65] >KDO30966.1 hypothetical protein SPRG_04154 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 136.3 bits (342), Expect = 1.500e-28 Identity = 76/191 (39.79%), Postives = 107/191 (56.02%), Query Frame = 0 Query: 12 LVVACLSSFVVACSIPAGTITPSSWPTFDNYKADEIIYASGKECVTCKVPKLARSKHCRLCGVCQSRFDHHCGWLNQCVGELNYRHFLFFLALHSMTFFWGSSCLWEVLRKEMAEKQLWEAKFYSPSSGATVGATPVVVLQYLVVHEGAVCGVLALCFVMAVVLAGFLLYHLRLALRNITTNESFKWSAVR 203 L A L +F ACS AG + + D+Y D ++Y C TCK KLARSKHC +C VC RFDH LN CVGE NY++FL F+ ++ +G+ L +L E+ QL++++F ++GA AT +V +Y++ +L +C VM L F L+HLRL +N TTNE FK +VR Sbjct: 117 LATAALCTFFQACSTSAGILNERTSRWHDHYPFDGVMYKKDNTCSTCKCIKLARSKHCTVCNVCVPRFDHRSSVLNACVGERNYKNFLAFIITNACFLVYGAYVLTCILLSEVVNLQLFQSQFVDQTTGAPTNATTFIVFRYMLHIHPVNMMLLFICVVMGAALTLFSLFHLRLVAQNRTTNEFFKQRSVR 307
BLAST of NO02G01830 vs. NCBI_GenBank
Match: XP_008861992.1 (hypothetical protein H310_00843 [Aphanomyces invadans] >ETW08187.1 hypothetical protein H310_00843 [Aphanomyces invadans]) HSP 1 Score: 135.6 bits (340), Expect = 2.500e-28 Identity = 82/247 (33.20%), Postives = 128/247 (51.82%), Query Frame = 0 Query: 8 FSTALVVACLSSFVVACSIPAGTITPSSWPTFDNYKADEIIYASGKECVTCKVPKLARSKHCRLCGVCQSRFDHHCGWLNQCVGELNYRHFLFFLALHSMTFFWGSSCLWEVLRKEMAEKQLWEAKFYSPSSGATVGATPVVVLQYLVVHEGAVCGVLALCFVMAVVLAGFLLYHLRLALRNITTNESFKWSAVRAHAKLARDHARRAHEASGGALPLRQIADPQNSYHISFVDNLKEVFFPRCERP 255 F+ + L +F+ A + G +T + + Y DE++Y + C TC+ K ARSKHC +C +C +RFDH WLN CVGE NYR+F+ F+ +++ + + L L E+ QL+E+K+ + ++G AT +V +Y++ VC + +C VM V L F ++H L + N TTNE FK+ A R L R+ ++ A ++ Y S N+ EV FPRC P Sbjct: 110 FTGGAALLALLTFIQASTANPGIVTMRTMAEYQTYNFDEVMYKTANSCKTCRCNKPARSKHCSVCDMCVARFDH--PWLNSCVGERNYRYFVLFILVNAGLCAYSAVVLLYTLLGEVVALQLFESKYINQATGEPTDATVWIVTRYVIYLYPVVCMLFFMCVVMGVALIAFSVFHAYLIVSNRTTNEFFKYVA-RGWRYLQIAAVRQR------SMTANAQATAKSFYSQSVARNVAEVLFPRCAAP 347
BLAST of NO02G01830 vs. NCBI_GenBank
Match: OQS00597.1 (hypothetical protein ACHHYP_03283 [Achlya hypogyna]) HSP 1 Score: 134.4 bits (337), Expect = 5.600e-28 Identity = 72/191 (37.70%), Postives = 110/191 (57.59%), Query Frame = 0 Query: 12 LVVACLSSFVVACSIPAGTITPSSWPTFDNYKADEIIYASGKECVTCKVPKLARSKHCRLCGVCQSRFDHHCGWLNQCVGELNYRHFLFFLALHSMTFFWGSSCLWEVLRKEMAEKQLWEAKFYSPSSGATVGATPVVVLQYLVVHEGAVCGVLALCFVMAVVLAGFLLYHLRLALRNITTNESFKWSAVR 203 L A + +F ACS AG + + D+Y D ++Y C TC+ KLARSKHC +C VC RFDH WLN CVGE NY+ FL F+ +++ +G+ L ++ E+ + QL+++K+ +P +G AT ++V +Y++ + +C VM LAGF ++H +L L+N TTNE FK + R Sbjct: 117 LSTAAICTFFQACSTSAGVLNARTTRWHDHYAYDGVMYKKDSTCKTCQCLKLARSKHCAVCNVCVPRFDH--PWLNACVGERNYKSFLAFIMTNAVFLIYGAYVLGCIILSEIVKLQLFKSKYVNPDTGEPTDATTMIVFRYVLHIHPVNVMLFFICVVMGAALAGFSVFHGKLVLQNRTTNEFFKQRSAR 305
BLAST of NO02G01830 vs. NCBI_GenBank
Match: XP_002467816.1 (probable protein S-acyltransferase 17 [Sorghum bicolor] >EER94814.1 hypothetical protein SORBI_3001G362200 [Sorghum bicolor]) HSP 1 Score: 131.7 bits (330), Expect = 3.600e-27 Identity = 87/259 (33.59%), Postives = 130/259 (50.19%), Query Frame = 0 Query: 20 FVVACSIPAGTITPSSWPTF-DNYKADEIIYASGKECVTCKVPKLARSKHCRLCGVCQSRFDHHCGWLNQCVGELNYRHFLFFLALHSMTFFWGSSCLWEVLRKEMAEKQ-LWEAKFYSPSSGATVGATPVVVLQYLVVHEGAVCGVLALCFVMAVVLAGFLLYHLRLALRNITTNESFKW-----------------SAVRAHAKLARDHARRAHEASGGALPLRQ---IADP---QNSYHISFVDNLKEVFFPRCER 254 FV+ GT+T + + +Y D II+ KEC TCK+ + AR+KHCR+C C +RFDHHCGW+N C+GE N R+F+ FL H + +G++ L +L E+ E++ ++ Y + G P V L VH + + L ++A++L GF YHL L L N TTNE+FKW +A++++ A A +A + A +R +P N Y + NL EV P ER Sbjct: 127 FVLTSFSDPGTVTAENVSQYVSSYPYDNIIFVE-KECSTCKITRPARAKHCRICDKCVARFDHHCGWMNNCIGEKNTRYFVAFLVWHFLICLYGATILGFILAGELKERKIIYILTVYYGIDNSFSGLFPHVAQWLLAVHNTQILLSVFLA-ILALLLGGFCAYHLHLCLTNTTTNETFKWQDYIMWMKKENEAKADAAALKSNIGSANSDAHKAPPSKWRAFFMRSRTPSVEPVVKNNIYDRGMIQNLCEVVVPLSER 383
BLAST of NO02G01830 vs. NCBI_GenBank
Match: PRP89340.1 (hypothetical protein PROFUN_02214 [Planoprotostelium fungivorum]) HSP 1 Score: 131.7 bits (330), Expect = 3.600e-27 Identity = 65/167 (38.92%), Postives = 101/167 (60.48%), Query Frame = 0 Query: 33 PSSWPTFDNYKADEIIYASGKECVTCKVPKLARSKHCRLCGVCQSRFDHHCGWLNQCVGELNYRHFL-FFLALHSMTFFWGSSCLWEVLRKEMAEKQLWEAKFYSPSSGATVGATPVVVLQYLVVHEGAVCGVLALCFVMAVVLAGFLLYHLRLALRNITTNESFKW 199 P++ + +Y D+++Y G+ C TC + + ARSKHC +C C RFDHHC W+N CVGE N R+FL F A S+T + G C + + AE ++W+ +F P +G T A+ ++V Q+++ G V + ++++VL GF YH+ L + N TTNES+KW Sbjct: 186 PTNEKQYSSYPFDDMLYTPGRTCRTCLIERPARSKHCSICDRCIGRFDHHCPWINNCVGENNLRYFLSFVFATASLTLYCGYLCYYIL----SAEGRIWDMRFRDPETGQTYEASYLLVFQWVMSAGGLVAPLGLFTGIISIVLYGFFAYHIYLIVVNTTTNESYKW 348 The following BLAST results are available for this feature:
BLAST of NO02G01830 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G01830 ID=NO02G01830|Name=NO02G01830|organism=Nannochloropsis oceanica|type=gene|length=2633bpback to top protein sequence of NO02G01830.3 >NO02G01830.3-protein ID=NO02G01830.3-protein|Name=NO02G01830.3|organism=Nannochloropsis oceanica|type=polypeptide|length=376bpback to top protein sequence of NO02G01830.2 >NO02G01830.2-protein ID=NO02G01830.2-protein|Name=NO02G01830.2|organism=Nannochloropsis oceanica|type=polypeptide|length=290bpback to top protein sequence of NO02G01830.1 >NO02G01830.1-protein ID=NO02G01830.1-protein|Name=NO02G01830.1|organism=Nannochloropsis oceanica|type=polypeptide|length=390bpback to top Synonyms
Publications
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