NO02G01530, NO02G01530 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO02G01530 vs. NCBI_GenBank
Match: EWM30523.1 (protein of unknown function DUF547 [Nannochloropsis gaditana]) HSP 1 Score: 200.7 bits (509), Expect = 4.900e-48 Identity = 96/135 (71.11%), Postives = 108/135 (80.00%), Query Frame = 0
Query: 1 MDRLVITPVGGKIPPLGKEFFEPDEVRIPRR-GKGEEPQFVLGPTYSMSFHSMYMDFAQWQLVNIAGQKSIDLAGYFGDSSVHIVVYDLDARAAGGGGDRHRKCDKRYFYHCELMQGKGEEPGGGRG-DLLGATE 134
MDRLV+TP G + PPLGKEF+EPDE R+PRR GKG+EP+FVLGP YSMSFHSMY+DF+QWQLVNIAGQKSIDL+GYFGD+SVHIVVYDL A G HR+CDKRYFYHCEL+ GE G D L ATE
Sbjct: 319 MDRLVVTPAGQEPPPLGKEFYEPDETRVPRRGGKGKEPEFVLGPIYSMSFHSMYLDFSQWQLVNIAGQKSIDLSGYFGDASVHIVVYDLHNSVAANPGGAHRRCDKRYFYHCELVSAGGEAGLGEEDTDRLSATE 453
BLAST of NO02G01530 vs. NCBI_GenBank
Match: CCI42573.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 81.6 bits (200), Expect = 3.300e-12 Identity = 42/118 (35.59%), Postives = 64/118 (54.24%), Query Frame = 0
Query: 1 MDRLVITPVGGKIPPLGKEFFEPDEVRIPRRGK---GEEPQFVLGPTYSMSFHSMYMDFAQWQLVNIAGQKSIDLAGYFGDSSVHIVVYDLDARAAG--GGGDRHRKCDKRYFYHCEL 114
+D+ TP G P LG + + E R G+E F +GPTY+ FH+MY+D W+ VNI G + L+ +F S + +V YD++ + G GG +H KC+KRY + E+
Sbjct: 303 VDQFTCTPKGQLAPQLGVQVIQETEQAQKHRKSVPVGQE-TFKVGPTYTFHFHTMYVDLHHWKTVNIPGINDMKLSTFFNSSPLRLVAYDVEFGSNGIQSGGGKHLKCNKRYLFCFEM 419
BLAST of NO02G01530 vs. NCBI_GenBank
Match: XP_002297027.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED86755.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 79.7 bits (195), Expect = 1.300e-11 Identity = 42/126 (33.33%), Postives = 73/126 (57.94%), Query Frame = 0
Query: 2 DRLVITPVGGKIPPLGKEFFEPDEVRIPRRG---KGEEPQFVLGPTYSMSFHSMYMDFAQWQLVNIAGQKSIDLAGYFGDSSVHIVVYDLDARAAGGGGDRHRKCDKRYFYHCEL--MQGKGEEPG 123
DR+V++ G ++P LG+EF E + + RR KG + T+SMSFH+MY+D A W+ +N+ K +DL+ ++G+ + +V+Y++ GGG+RH + Y+ E+ + G+E G
Sbjct: 469 DRVVVSKPGEEVPTLGEEFLESEASQQSRRNADLKGCAGGWNTRDTFSMSFHNMYLDLAMWRTINLPIAKDMDLSMFWGEGMLRLVMYEVS--LVVGGGERHVTKELSYYVGVEIKYLSDGGKEAG 592
BLAST of NO02G01530 vs. NCBI_GenBank
Match: CCA18149.1 (conserved hypothetical protein [Albugo laibachii Nc14]) HSP 1 Score: 79.3 bits (194), Expect = 1.600e-11 Identity = 42/118 (35.59%), Postives = 67/118 (56.78%), Query Frame = 0
Query: 1 MDRLVITPVGGKIPPLG-KEFFEPDEVRIPRRG--KGEEPQFVLGPTYSMSFHSMYMDFAQWQLVNIAGQKSIDLAGYFGDSSVHIVVYDL--DARAAGGGGDRHRKCDKRYFYHCEL 114
+D+ + TP G P LG ++ E ++ R R+ G+E F +GPTY+ FH+MY+D W+ VNI G + L+ +F S + +V YD+ D+ GG +H K +KRY + E+
Sbjct: 303 VDQFICTPEGQVAPQLGVEDIQETEQARKLRKSVLVGQE-AFQVGPTYTFHFHTMYVDLLHWKTVNIPGINDMKLSTFFDSSPLRLVAYDVEFDSNVPRSGGGKHLKFNKRYLFCFEM 419
BLAST of NO02G01530 vs. NCBI_GenBank
Match: CBN77610.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 79.0 bits (193), Expect = 2.100e-11 Identity = 47/145 (32.41%), Postives = 72/145 (49.66%), Query Frame = 0
Query: 1 MDRLVITPVGGKIPPLGKEFFEPDEVRIPRRGKGEEPQ------FVLGPTYSMSFHSMYMDFAQWQLVNIAGQKSIDLAGYFGDSSVHIVVYDLDARAAGGGGDRHRKCDKRYFYHCELMQ------GKGEEPGGGRGDLLGATE 134
+D LV TP G ++P LGK FE D+ R R +GEE + F G TYS SFHSMY+D AQW I + IDL ++G++++ + Y + ++ H + + Y + ++ G+ + GG GA E
Sbjct: 633 VDSLVCTPEGQEVPALGKS-FEEDKDRKASRRRGEEDKALGIGDFQTGCTYSFSFHSMYIDMAQWSTCKIPVMRDIDLHTFWGNAALRVAAYVMKPSSSSASSKLHLQSELEYVFCVQVRHVPQSELGQSADEGGWDEAEAGAEE 776
BLAST of NO02G01530 vs. NCBI_GenBank
Match: POM59580.1 (hypothetical protein PHPALM_31663 [Phytophthora palmivora var. palmivora]) HSP 1 Score: 74.7 bits (182), Expect = 4.000e-10 Identity = 45/117 (38.46%), Postives = 65/117 (55.56%), Query Frame = 0
Query: 1 MDRLVITPVGGKIPPLGK-EFFEPDEVRIPRR--GKGEEPQFVLGPTYSMSFHSMYMDFAQWQLVNI-AGQKSIDLAGYFGDSSVHIVVYDLDARAAGGGGDRHRKCDKRYFYHCEL 114
+D+ V TP G P LG +F E + RI RR GEE Q+VLG TY+ FH+MY+D +W+ N+ G ++DLA +F + +V Y + A D HR+ DK Y + E+
Sbjct: 228 VDQFVETPEGEIPPVLGTGDFGESEAQRIKRRQTSLGEE-QYVLGRTYTFDFHTMYVDLTRWETANLPGGLNAMDLASFFDSLPLRLVAYQVRATVE---TDSHRQRDKDYLFSFEV 340
BLAST of NO02G01530 vs. NCBI_GenBank
Match: POM80081.1 (Hypothetical protein PHPALM_2126, partial [Phytophthora palmivora var. palmivora]) HSP 1 Score: 74.3 bits (181), Expect = 5.300e-10 Identity = 45/117 (38.46%), Postives = 65/117 (55.56%), Query Frame = 0
Query: 1 MDRLVITPVGGKIPPLGK-EFFEPDEVRIPRRGK--GEEPQFVLGPTYSMSFHSMYMDFAQWQLVNI-AGQKSIDLAGYFGDSSVHIVVYDLDARAAGGGGDRHRKCDKRYFYHCEL 114
+D+ V TP G P LG +F E + RI RR GEE Q+VLG TY+ FH+MY+D +W+ N+ G ++DLA +F + +V Y + A D HR+ DK Y + E+
Sbjct: 213 VDQFVETPEGEIPPVLGTGDFGESEAQRIKRRHTPLGEE-QYVLGRTYTFDFHTMYVDLTKWETANLPGGLNAMDLASFFDSLPLRLVAYQVRATVE---TDSHRQRDKDYLFSFEV 325
BLAST of NO02G01530 vs. NCBI_GenBank
Match: XP_012196393.1 (hypothetical protein SPRG_02427 [Saprolegnia parasitica CBS 223.65] >KDO32729.1 hypothetical protein SPRG_02427 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 71.2 bits (173), Expect = 4.500e-9 Identity = 40/118 (33.90%), Postives = 59/118 (50.00%), Query Frame = 0
Query: 1 MDRLVITPVGGKIPPLGKEFF-EPDEVRIPRRGKGEEPQFVLGPTYSMSFHSMYMDFAQWQLVNIAGQKSIDLAGYFGDSSVHIVVYDLDARAAGGGGDRHRKCDKRYFYHCELMQGK 118
+D TP G P LG++ F E D+ R R E F TY+ SFHS Y+DF +WQLVN+ G S+ L ++ + IV Y + + H + +K+Y+ + EL K
Sbjct: 157 VDEFHRTPEGHTPPRLGQDVFGETDDERAARYAAKGEYAFNTRDTYTFSFHSEYVDFERWQLVNVPGLPSVPLETFWETMPMRIVAYSIASATDMTSPLPHTQLEKQYYMNVELSAAK 274
BLAST of NO02G01530 vs. NCBI_GenBank
Match: XP_024583982.1 (Pleckstrin homology-like domain [Plasmopara halstedii] >CEG47613.1 Pleckstrin homology-like domain [Plasmopara halstedii]) HSP 1 Score: 71.2 bits (173), Expect = 4.500e-9 Identity = 42/124 (33.87%), Postives = 69/124 (55.65%), Query Frame = 0
Query: 1 MDRLVITPVGGKIPPLG-KEFFEPDEVRIPRR--GKGEEPQFVLGPTYSMSFHSMYMDFAQWQLVNI-AGQKSIDLAGYFGDSSVHIVVYDL---DARAAGGGGDRHRKCDKRYFYHCELMQGK 118
+D+ V TP G P LG +F E +E R RR G E ++ +GPTY+ FH+MY+D +W+ N+ G +++LA +F + +V Y++ D + + DRHR+ DK Y + ++ K
Sbjct: 231 VDQFVETPEGHVPPILGTSDFGESEESRRQRRLTSLGAE-KYTVGPTYTFDFHTMYVDLTRWETANLPGGLNAMNLASFFDSLPLRLVAYEVRPSDLKTS----DRHRQRDKEYLFSFQVKYDK 349
BLAST of NO02G01530 vs. NCBI_GenBank
Match: GAX94476.1 (Hypothetical protein PINS_002375 [Pythium insidiosum]) HSP 1 Score: 70.9 bits (172), Expect = 5.800e-9 Identity = 46/119 (38.66%), Postives = 58/119 (48.74%), Query Frame = 0
Query: 1 MDRLVITPVG-GKIPPLGKEFF-EPDEVRIPRRGK--GEEPQFVLGPTYSMSFHSMYMDFAQWQLVNIAGQKSIDLAGYFGDSSVHIVVY------DLDARAAGGGGDRHRKCDKRYFY 110
+D LV+TP G +P LG E F E E R R G EP L TYS FH+MY D AQW++VN+ G +DL + G + + Y A AA G HR DK Y +
Sbjct: 175 VDELVVTPDGDAPLPSLGCESFGETAEQRRTRMATLLGHEPAIRLDATYSFQFHTMYADLAQWKIVNVPGMPEMDLKRFCGSLPIRLAAYYVTRPPGTPATAASG---PHRLQDKAYVF 290 The following BLAST results are available for this feature:
BLAST of NO02G01530 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G01530 ID=NO02G01530|Name=NO02G01530|organism=Nannochloropsis oceanica|type=gene|length=672bpback to top protein sequence of NO02G01530.1 >NO02G01530.1-protein ID=NO02G01530.1-protein|Name=NO02G01530.1|organism=Nannochloropsis oceanica|type=polypeptide|length=224bpback to top Synonyms
Publications
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