NO02G01350, NO02G01350 (gene) Nannochloropsis oceanica

Overview
NameNO02G01350
Unique NameNO02G01350
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1608
Alignment locationchr2:409023..410630 +

Link to JBrowse

Properties
Property NameValue
DescriptionAdp-ribosylation factor gtpase-activating protein agd7
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:409023..410630 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005096GTPase activator activity
GO:0046872metal ion binding
GO:0005096GTPase activator activity
Vocabulary: INTERPRO
TermDefinition
IPR037278ARFGAP/RecO
IPR001164ArfGAP
Vocabulary: Biological Process
TermDefinition
GO:0043547positive regulation of GTPase activity
Homology
BLAST of NO02G01350 vs. NCBI_GenBank
Match: EWM30510.1 (adp-ribosylation factor gtpase-activating protein agd7 [Nannochloropsis gaditana])

HSP 1 Score: 417.2 bits (1071), Expect = 6.100e-113
Identity = 219/332 (65.96%), Postives = 245/332 (73.80%), Query Frame = 0
Query:   21 TMAHSMDAATERRLRELPGNRVCADCPAPNPQWASVSYGCFICLDCSGQHRALGVHLSFVRSITMDSWTDKQVKLMENGGNEKLVSFLHQRGVEKSLPIHKKYNTPEAELYRERMKALVEGRELPT-------XXXXXXXXXXXXXXXXXXXXXSALEPLQGETEAQYVARQRQLNEEARQRMKAKFGPAGLSGGXXXXRMQGFGSDPNYDPSKGGXXXXXXQDIGGEIMGAVGKLGLTVQAHLQEGQLGQKLQMGWSNVSSRVQDPELAAKVKEKASTGWSALATGAVALWSKTADLTVDLVKDITKEEEEPMRLYNRSG-GEGAGRGGLV 345
            TMAHSMD+ TERRLREL GN+VCADCPAPNPQWASVSYG FICLDCSGQHRALGVHLSFVRSITMDSWTDKQ+KLME GGN++++SF  QRG+ KS+PI +KY T EAELYRER+KA+VEGRE PT                            SALEPL GET+ QYVARQRQLN+EAR RM+AKFGP G  GG    RMQGFGSDP+YDPS+G       Q++G EI+GAVGK G TVQA LQEGQLG+KLQ  WS               KE+AS+GWSALATGA  LWSKTADLTVDLV+DITKEE+EP+R YNR G GE  G G  V
Sbjct:   24 TMAHSMDSVTERRLRELAGNKVCADCPAPNPQWASVSYGSFICLDCSGQHRALGVHLSFVRSITMDSWTDKQIKLMEKGGNDQVISFFQQRGIAKSVPIQQKYKTAEAELYRERIKAVVEGREPPTELPAGARALSASGLGQGPATSSGGGQGVSALEPLPGETQDQYVARQRQLNDEARHRMQAKFGPGGFQGG-GGGRMQGFGSDPDYDPSRGRFGGGKGQELGNEIIGAVGKWGSTVQAQLQEGQLGKKLQASWSXXXXXXXXXXXXXXXKERASSGWSALATGAATLWSKTADLTVDLVRDITKEEDEPIRFYNRLGEGEERGTGAAV 354          
BLAST of NO02G01350 vs. NCBI_GenBank
Match: CBJ25986.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 249.6 bits (636), Expect = 1.700e-62
Identity = 173/353 (49.01%), Postives = 220/353 (62.32%), Query Frame = 0
Query:   22 MAHSMDAATERRLRELPGNRVCADCPAPNPQWASVSYGCFICLDCSGQHRALGVHLSFVRSITMDSWTDKQVKLMENGGNEKLVSFLHQRGVEKSLPIHKKYNTPEAELYRERMKALVEGRELPT---------------XXXXXXXXXXXXXXXXXXXXXSALEPLQGETEAQYVARQRQLNEEARQRMKAKFGPAGLSGGXXXXRMQGFGSDPNYDPSKG-------GXXXXXXQDIGGEI--MG-----------AVGKLGLTVQAH-LQEGQLGQKLQMGWSNVSSRVQDPELAAKVKEKASTGWSALATGAVALWSKTADLTVDLVKDITKEEEEPMRLYNRSGGEGA 339
            M+H+MDA  +R +R LPGN  C DC   NPQWASVSYGC  CL+CSGQHR LGVH+SFVRSITMDSW++KQ+ +M  GGN+KL+ +    GV     I KKY++P AEL+R+R+ A VEGR LPT               XXXXXXXXXXXXXXXXXXXX   +E L GET+++YVARQ  L  EA  RM+ KFG +         RMQG GSD +YDP+ G        XXXX   DIGG+I  MG           A  + G+   AH L+E Q+GQ L  G+ +VS++++DPEL  KV   A+ GW AL+  A +LWSK  +    +      E +EP++LY ++G E A
Sbjct:    1 MSHAMDAGIQREIRALPGNTRCVDCGVANPQWASVSYGCVFCLECSGQHRGLGVHISFVRSITMDSWSEKQINMMRAGGNQKLIDWFQSHGVTSDQRIAKKYHSPAAELFRDRLLATVEGRPLPTELPQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRGMERLAGETDSEYVARQTALRGEASARMRDKFGGSN--------RMQGLGSDSSYDPASGXXXXXXXXXXXXTADDIGGQIGVMGQKSMRFLSESFATLQTGVKETAHTLEEQQIGQSLSSGFQSVSAKLKDPELTQKVSASAAWGWGALSNQAGSLWSKATETVAGI-----SEGDEPLKLY-KAGDEAA 339          
BLAST of NO02G01350 vs. NCBI_GenBank
Match: GAX93670.1 (Hypothetical protein PINS_001556 [Pythium insidiosum])

HSP 1 Score: 239.2 bits (609), Expect = 2.300e-59
Identity = 154/303 (50.83%), Postives = 186/303 (61.39%), Query Frame = 0
Query:   23 AHSMDAATERRLRELPGNRVCADCPAPNPQWASVSYGCFICLDCSGQHRALGVHLSFVRSITMDSWTDKQVKLMENGGNEKLVSFLHQRGVEKSLPIHKKYNTPEAELYRERMKALVEGR-----------ELPTXXXXXXXXXXXXXXXXXXXXXSALEPLQGETEAQYVARQRQLNEEARQRMKAKFGPAGLSGGXXXXRMQGFGSDPNYDPSKGGXXXXXXQDIGGEIMGAVGKLGLTVQAHLQEGQLGQKLQMGWSNVSSRVQDPELAAKVKEKASTGWSALATGAVALWSKTADLTVD 315
            AH M   T++ LR LPGN  C DC AP PQWA+VSYG F+CL+CSG+HR LGVH+SFVRS+TMDSWTDKQ+  M+ GGN+         GV  SL IH+KYNTP+AE YR+R+ ALVEGR            LP XXXXXXXXXXXXXXXXXXX    +E L+GE+E  YVARQ +L +EAR RM+AKFG +GL         QG GS                    G +   V     +  + ++E  LG K+  GWS V S + DP L   VK  ASTGWS LA+GA A+W K+A   VD
Sbjct:  424 AHQMPIETQQELRRLPGNNRCVDCDAPYPQWATVSYGTFMCLECSGRHRGLGVHISFVRSVTMDSWTDKQILQMQRGGNDAFREAFASAGVPTSLSIHQKYNTPQAEAYRQRLLALVEGRAAPPLPRWDPSSLPAXXXXXXXXXXXXXXXXXXXDTRGVEALKGESEQDYVARQMRLRDEARARMQAKFGGSGL---------QGIGSGGETRAPSAPAGISDLSSAFGFLSSTVSSAATSAVSLVKEQDLGSKVSSGWSYVQSAIGDPALTQNVKSTASTGWSTLASGATAVW-KSAQTVVD 716          
BLAST of NO02G01350 vs. NCBI_GenBank
Match: OWZ22426.1 (hypothetical protein PHMEG_0002889 [Phytophthora megakarya])

HSP 1 Score: 228.8 bits (582), Expect = 3.100e-56
Identity = 156/302 (51.66%), Postives = 184/302 (60.93%), Query Frame = 0
Query:   22 MAHSMDAATERRLRELPGNRVCADCPAPNPQWASVSYGCFICLDCSGQHRALGVHLSFVRSITMDSWTDKQVKLMENGGNEKLVSFLHQRGVEKSLPIHKKYNTPEAELYRERMKALVEGRELPT----------XXXXXXXXXXXXXXXXXXXXXSALEPLQGETEAQYVARQRQLNEEARQRMKAKFGPAGLSGGXXXXRMQGFGSDPNYDPSKGGXXXXXXQDIG--GEIMGAVGKLGLTV------QAHLQEGQ-LGQKLQMGWSNVSSRVQDPELAAKVKEKASTGWSALATGAVAL 305
            MAH M   T++ LR LPGN  C DC AP PQWA+VSYG F+CL+CSG+HR LGVH+SFVRS+TMDSWTDKQV  M+ GGN+         GV   L I +KYNTP+AE YR+R+ A+VEGR  P+               XXXXXXXXXXXXXXXX  +E L+GE+E  YVARQ +L EEAR RM AKFG  G         MQG GS        GG         G  G+I GA      TV       A+L + Q LG K+  GWS V S +QDP L+  VK  ASTGWSAL++GA AL
Sbjct:    1 MAHQMPMETQQELRRLPGNNRCVDCDAPYPQWATVSYGTFMCLECSGRHRGLGVHISFVRSVTMDSWTDKQVLQMQKGGNDSFRVAFSAAGVPTDLSISEKYNTPQAEAYRQRLTAIVEGRSPPSLPQWDPSMRKPASSSXXXXXXXXXXXXXXXXXXVEALKGESEQDYVARQMKLREEARARMSAKFGGNG---------MQGIGS--------GGETRAPQTSSGGYGDISGAFSYFTSTVTTAASSAANLVKDQDLGSKVSSGWSYVQSAIQDPALSNNVKSSASTGWSALSSGASAL 285          
BLAST of NO02G01350 vs. NCBI_GenBank
Match: XP_009517356.1 (hypothetical protein PHYSODRAFT_358803 [Phytophthora sojae] >EGZ30081.1 hypothetical protein PHYSODRAFT_358803 [Phytophthora sojae])

HSP 1 Score: 223.0 bits (567), Expect = 1.700e-54
Identity = 148/302 (49.01%), Postives = 182/302 (60.26%), Query Frame = 0
Query:   22 MAHSMDAATERRLRELPGNRVCADCPAPNPQWASVSYGCFICLDCSGQHRALGVHLSFVRSITMDSWTDKQVKLMENGGNEKLVSFLHQRGVEKSLPIHKKYNTPEAELYRERMKALVEGRELPT----------XXXXXXXXXXXXXXXXXXXXXSALEPLQGETEAQYVARQRQLNEEARQRMKAKFGPAGLSGGXXXXRMQGFGSDPNYDPSKGGXXXXXXQDIG--GEIMGA-------VGKLGLTVQAHLQEGQLGQKLQMGWSNVSSRVQDPELAAKVKEKASTGWSALATGAVAL 305
            MAH M   T++ LR LPGN  C DC AP PQWA+VSYG F+CL+CSG+HR LGVH+SFVRS+TMDSWTDKQV  M+ GGN+   +     GV   L I +KYNTP+AE YR+R+ A+VEGR  P+               XXXXXXXXXXXXXXXX  +E L+GE+E  YVARQ +L EEAR RM AKFG  G         MQG GS        GG         G  G++ GA       V     T  + +++  LG K+  GWS V S + DP L+  VK  A++GWSAL++GA  L
Sbjct:    1 MAHQMPMETQQELRRLPGNNRCVDCDAPYPQWATVSYGTFMCLECSGRHRGLGVHISFVRSVTMDSWTDKQVLQMQKGGNDSFRAAFSAAGVPTDLSISEKYNTPQAEAYRQRLTAIVEGRSPPSLPQWDPSMRKPASSSXXXXXXXXXXXXXXXXXXVEALKGESEQDYVARQMKLREEARARMAAKFGGNG---------MQGIGS--------GGETRAPQAPAGGLGDLSGAFSYFTSTVTSAASTAASLVKDQDLGSKVSSGWSYVQSAIHDPALSDNVKSSATSGWSALSSGASTL 285          
BLAST of NO02G01350 vs. NCBI_GenBank
Match: XP_008914204.1 (hypothetical protein PPTG_17983 [Phytophthora parasitica INRA-310] >ETI33190.1 hypothetical protein F443_20119 [Phytophthora parasitica P1569] >ETK73503.1 hypothetical protein L915_19582 [Phytophthora parasitica] >ETL26934.1 hypothetical protein L916_19472 [Phytophthora parasitica] >ETL80180.1 hypothetical protein L917_19311 [Phytophthora parasitica] >ETM33429.1 hypothetical protein L914_19347 [Phytophthora parasitica] >ETN00533.1 hypothetical protein PPTG_17983 [Phytophthora parasitica INRA-310] >ETP02995.1 hypothetical protein F441_19998 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 220.3 bits (560), Expect = 1.100e-53
Identity = 147/302 (48.68%), Postives = 182/302 (60.26%), Query Frame = 0
Query:   22 MAHSMDAATERRLRELPGNRVCADCPAPNPQWASVSYGCFICLDCSGQHRALGVHLSFVRSITMDSWTDKQVKLMENGGNEKLVSFLHQRGVEKSLPIHKKYNTPEAELYRERMKALVEGRELPT----------XXXXXXXXXXXXXXXXXXXXXSALEPLQGETEAQYVARQRQLNEEARQRMKAKFGPAGLSGGXXXXRMQGFGSDPNYDPSKGGXXXXXXQDIG--GEIMGAVGKLGLTV-------QAHLQEGQLGQKLQMGWSNVSSRVQDPELAAKVKEKASTGWSALATGAVAL 305
            MAH M   T++ LR LPGN  C DC AP PQWA+VSYG F+CL+CSG+HR LGVH+SFVRS+TMDSWTDKQV  M+ GGN+   +     GV   L I +KYNTP+AE YR+R+ A+VEGR  P+               XXXXXXXXXXXXXXXX  +E L+GE+E  YVARQ +L EEAR RM AKFG  G         MQG GS        GG         G  G++ GA      TV        + +++  LG K+  GWS V S + DP L+  VK  A++GWS L++GA +L
Sbjct:    1 MAHQMPMETQQELRRLPGNNRCVDCDAPYPQWATVSYGTFMCLECSGRHRGLGVHISFVRSVTMDSWTDKQVLQMQKGGNDTFRAAFSAAGVPTDLSISEKYNTPQAEAYRQRLTAIVEGRSPPSLPQWDPSMRKPASSSXXXXXXXXXXXXXXXXXXVEALKGESEQDYVARQMKLREEARARMAAKFGGNG---------MQGIGS--------GGETRAPQTSSGGLGDLSGAFSYFTSTVTTAASSAASLVKDQDLGSKVSTGWSYVQSAIHDPALSDNVKSSATSGWSMLSSGASSL 285          
BLAST of NO02G01350 vs. NCBI_GenBank
Match: ETO61900.1 (hypothetical protein F444_20132 [Phytophthora parasitica P1976])

HSP 1 Score: 219.9 bits (559), Expect = 1.400e-53
Identity = 147/302 (48.68%), Postives = 181/302 (59.93%), Query Frame = 0
Query:   22 MAHSMDAATERRLRELPGNRVCADCPAPNPQWASVSYGCFICLDCSGQHRALGVHLSFVRSITMDSWTDKQVKLMENGGNEKLVSFLHQRGVEKSLPIHKKYNTPEAELYRERMKALVEGRELPT----------XXXXXXXXXXXXXXXXXXXXXSALEPLQGETEAQYVARQRQLNEEARQRMKAKFGPAGLSGGXXXXRMQGFGSDPNYDPSKGGXXXXXXQDIG--GEIMGAVGKLGLTV-------QAHLQEGQLGQKLQMGWSNVSSRVQDPELAAKVKEKASTGWSALATGAVAL 305
            MAH M   T++ LR LPGN  C DC AP PQWA+VSYG F+CL+CSG+HR LGVH+SFVRS+TMDSWTDKQV  M+ GGN+   +     GV   L I +KYNTP+AE YR+R+ A+VEGR  P+               XXXXXXXXXXXXXXXX  +E L+GE+E  YVARQ +L EEAR RM AKFG  G         MQG GS        GG         G  G++ GA      TV        + +++  LG K+  GWS V S + DP L+  VK  A++GWS L++GA  L
Sbjct:    1 MAHQMPMETQQELRRLPGNNRCVDCDAPYPQWATVSYGTFMCLECSGRHRGLGVHISFVRSVTMDSWTDKQVLQMQKGGNDTFRAAFSAAGVPTDLSISEKYNTPQAEAYRQRLTAIVEGRSPPSLPQWDPSMRKPASSSXXXXXXXXXXXXXXXXXXVEALKGESEQDYVARQMKLREEARARMAAKFGGNG---------MQGIGS--------GGETRAPQTSSGGLGDLSGAFSYFTSTVTTAASSAASLVKDQDLGSKVSTGWSYVQSAIHDPALSDNVKSSATSGWSMLSSGASTL 285          
BLAST of NO02G01350 vs. NCBI_GenBank
Match: XP_024584216.1 (pde1 suppressor 1 family protein [Plasmopara halstedii] >CEG47847.1 pde1 suppressor 1 family protein [Plasmopara halstedii])

HSP 1 Score: 218.4 bits (555), Expect = 4.100e-53
Identity = 131/312 (41.99%), Postives = 171/312 (54.81%), Query Frame = 0
Query:   22 MAHSMDAATERRLRELPGNRVCADCPAPNPQWASVSYGCFICLDCSGQHRALGVHLSFVRSITMDSWTDKQVKLMENGGNEKLVSFLHQRGVEKSLPIHKKYNTPEAELYRERMKALVEG----------RELPTXXXXXXXXXXXXXXXXXXXXXSALEPLQGETEAQYVARQRQLNEEARQRMKAKFGPAGLSGGXXXXRMQGFGSDPNYDPSKGGXXXXXXQDIG--GEIMGAVGKLGLTVQAH-------LQEGQLGQKLQMGWSNVSSRVQDPELAAKVKEKASTGWSALATGAVALWSKTADLTVD 315
            MAH M    ++ LR LPGN  C DC AP PQWA+V+YG F+CL+CSG+HR LGVH+SFVRS+TMDSWTDKQV  M+ GGN+   S     GV   L I +KYNTP+AE YR+R+ A++EG            +                         +E L+GE+E +Y ARQ +L E+AR RM AKFG  G         MQG GS        GG         G  G++ GA   L  TV          +++G+LG K+  GWS V S VQ P ++  VK  AS+GWS L+ GA +L+ +TA + V+
Sbjct:    1 MAHQMPMEIQQELRRLPGNNRCVDCEAPYPQWATVTYGTFMCLECSGRHRGLGVHISFVRSVTMDSWTDKQVLQMQKGGNDAFRSAFSAAGVPTDLSISEKYNTPQAEAYRQRLLAIIEGGAVLPLPQWNSTMRQPASFPLSSTSFGGGGFAGGDIRGVEALKGESEQEYAARQMKLREDARARMAAKFGGNG---------MQGIGS--------GGETRAPHAQSGTLGDLSGAFSFLASTVTTAASSAANLVKDGELGSKVSSGWSYVQSAVQGPSISEHVKNSASSGWSVLSDGASSLF-QTAQIAVN 294          
BLAST of NO02G01350 vs. NCBI_GenBank
Match: ETP31173.1 (hypothetical protein F442_19946 [Phytophthora parasitica P10297])

HSP 1 Score: 218.0 bits (554), Expect = 5.400e-53
Identity = 146/302 (48.34%), Postives = 181/302 (59.93%), Query Frame = 0
Query:   22 MAHSMDAATERRLRELPGNRVCADCPAPNPQWASVSYGCFICLDCSGQHRALGVHLSFVRSITMDSWTDKQVKLMENGGNEKLVSFLHQRGVEKSLPIHKKYNTPEAELYRERMKALVEGRELPT----------XXXXXXXXXXXXXXXXXXXXXSALEPLQGETEAQYVARQRQLNEEARQRMKAKFGPAGLSGGXXXXRMQGFGSDPNYDPSKGGXXXXXXQDIG--GEIMGAVGKLGLTV-------QAHLQEGQLGQKLQMGWSNVSSRVQDPELAAKVKEKASTGWSALATGAVAL 305
            MAH M   T++ LR LPGN  C DC AP PQWA+VSYG F+CL+CSG+HR LGVH+SFVRS+TMDSWTDKQV  M+ GG++   +     GV   L I +KYNTP+AE YR+R+ A+VEGR  P+               XXXXXXXXXXXXXXXX  +E L+GE+E  YVARQ +L EEAR RM AKFG  G         MQG GS        GG         G  G++ GA      TV        + +++  LG K+  GWS V S + DP L+  VK  A++GWS L++GA  L
Sbjct:    1 MAHQMPMETQQELRRLPGNNRCVDCDAPYPQWATVSYGTFMCLECSGRHRGLGVHISFVRSVTMDSWTDKQVLQMQKGGDDTFRAAFSAAGVPTDLSISEKYNTPQAEAYRQRLTAIVEGRSPPSLPQWDPSMRKPASSSXXXXXXXXXXXXXXXXXXVEALKGESEQDYVARQMKLREEARARMAAKFGGNG---------MQGIGS--------GGETRAPQTSSGGLGDLSGAFSYFTSTVTTAASSAASLVKDQDLGSKVSTGWSYVQSAIHDPALSDNVKSSATSGWSMLSSGASTL 285          
BLAST of NO02G01350 vs. NCBI_GenBank
Match: XP_002997471.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY68779.1 conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 213.0 bits (541), Expect = 1.700e-51
Identity = 149/302 (49.34%), Postives = 182/302 (60.26%), Query Frame = 0
Query:   22 MAHSMDAATERRLRELPGNRVCADCPAPNPQWASVSYGCFICLDCSGQHRALGVHLSFVRSITMDSWTDKQVKLMENGGNEKLVSFLHQRGVEKSLPIHKKYNTPEAELYRERMKALVEGRELPT----------XXXXXXXXXXXXXXXXXXXXXSALEPLQGETEAQYVARQRQLNEEARQRMKAKFGPAGLSGGXXXXRMQGFGSDPNYDPSKGGXXXXXXQDIG--GEIMGAVGKLGLTV-------QAHLQEGQLGQKLQMGWSNVSSRVQDPELAAKVKEKASTGWSALATGAVAL 305
            MAH M   T++ LR LPGN  C DC AP PQWA+VSYG F+CL+CSG+HR LGVH+SFVRS+TMDSWTDKQV  M+ GGN+   +     GV   L I +KYNTP+AE YR+R+ A+VEGR  P+          XXXXXXXXXXXXXXXXXXXXX  +E L+GE+E  YVARQ++L EEAR RM AKFG  G         MQG GS        GG         G  G++ GA      TV        + +++  LG K+   WS V S + DP L+  VK  AS+GW      A +L
Sbjct:    1 MAHQMPMETQQELRRLPGNNRCVDCDAPYPQWATVSYGTFMCLECSGRHRGLGVHISFVRSVTMDSWTDKQVLQMQKGGNDSFRAAFSAAGVPTDLSISEKYNTPQAEAYRQRLTAIVEGRSPPSLPQWDPAMRKXXXXXXXXXXXXXXXXXXXXXXXVEALKGESEQDYVARQKKLREEARSRMAAKFGGNG---------MQGIGS--------GGETRAPQTSSGGLGDLSGAFSYFTSTVTTAASSAASLVKDQDLGSKVSSSWSYVQSAIHDPALSDNVKSSASSGWXXXXXXASSL 285          
The following BLAST results are available for this feature:
BLAST of NO02G01350 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM30510.16.100e-11365.96adp-ribosylation factor gtpase-activating protein ... [more]
CBJ25986.11.700e-6249.01conserved unknown protein [Ectocarpus siliculosus][more]
GAX93670.12.300e-5950.83Hypothetical protein PINS_001556 [Pythium insidios... [more]
OWZ22426.13.100e-5651.66hypothetical protein PHMEG_0002889 [Phytophthora m... [more]
XP_009517356.11.700e-5449.01hypothetical protein PHYSODRAFT_358803 [Phytophtho... [more]
XP_008914204.11.100e-5348.68hypothetical protein PPTG_17983 [Phytophthora para... [more]
ETO61900.11.400e-5348.68hypothetical protein F444_20132 [Phytophthora para... [more]
XP_024584216.14.100e-5341.99pde1 suppressor 1 family protein [Plasmopara halst... [more]
ETP31173.15.400e-5348.34hypothetical protein F442_19946 [Phytophthora para... [more]
XP_002997471.11.700e-5149.34conserved hypothetical protein [Phytophthora infes... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL016nonsL016Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR033ncniR033Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR032ncniR032Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR000ngnoR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK006752NSK006752Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO02G01350.1NO02G01350.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|536231gene_715Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100013g67gene146Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO02G01350.1NO02G01350.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO02G01350 ID=NO02G01350|Name=NO02G01350|organism=Nannochloropsis oceanica|type=gene|length=1608bp
ATGCTTTCTGCTCCACCCACGCACTATCACACAGCCTTTCAGCAACAGCT
CCAGGACGATACGATGGCCCACTCGATGGATGCCGCAACGGAACGTCGCC
TGCGGGAGCTGCCAGGCAACAGGgtacgttcgttcattaaacgatgatga
taaatgaatgtgtcggggtcctgtacactgcagatcatcgtgtgtgtccc
tctgtgcgcctgtgcttgtaaggatacatgtgtgcgcgtgcgtgctttag
tgtacacccagatcaaagacgcaagagcgctggagccctcctgtagtctg
catccggccgcccgcttcgttcatggtgacgatgacgatctggggctccc
gtttcgcggcaacaccagacaacctcaagctgacgaagctcgaaaatgac
cttgcagtgtaccatgctttgatgtcatcgattgccctctctttttcctt
gactcacattcaccctcccctccctcccaaaattcctctttccgtcagGT
CTGCGCCGACTGCCCTGCCCCCAATCCCCAGTGGGCCAGCGTCTCTTATG
GCTGCTTCATCTGCTTGGACTGCTCTGGGCAACATCGTGCATTGGGCGTG
CATCTATCGTTTGTCCGCTCTATTACCATGGATAGTTGGACCGACAAGCA
AGTGAAGCTAATGGAGAACGGGGGGAATGAAAAACTGGTTTCGTTCTTGC
ATCAGAGGGGGGTGGAGAAGAGTCTGCCGATACACAAAAAGTACAATACT
CCCGAAGCAGAATTGTATAGGGAGAGGATGAAGGCTTTGGTTGAGGGGAG
GGAGCTACCGACGGAGCTCCCGAAGCGGGTACCTGCTCCTGTTCCTAGTG
ATGGAGAGGGGGGGGGGCAAGTGGGTTCGGCCTTGGAACCTTTGCAGGGG
GAGACAGAAGCGCAGTATGTGGCGCGGCAGAGACAGTTGAACGAAGAGGC
GAGGCAGAGGATGAAGGCCAAGTTTGGCCCGGCGGGGTTGAGTGGCGGTG
GAGGAGGAGGGAGAATGCAGGGGTTTGGTAGTGATCCCAATTATGACCCT
TCCAAGGGGGGGTTTGGTGGAGGCAAGGGACAGGATATTGGCGGTGAGAT
TATGGGAGCTGTGGGAAAGCTAGGGTTGACGGTGCAGGCGCATTTGCAGG
AGGGGCAGTTGGGGCAAAAGCTGCAGATGGGTTGGAGCAACGTGTCAAGT
CGGGTCCAGGATCCGGAGCTGGCAGCGAAGGTGAAGGAAAAGGCGAGCAC
GGGCTGGTCGGCACTGGCGACTGGGGCGGTGGCGCTTTGGAGTAAGACGG
CTGATTTGACTGTGGACTTGGTGAAGGATATAACGAAGGAGGAGGAAGAA
CCCATGCGATTGTACAATAGGTCAGGAGGGGAGGGAGCGGGGAGAGGAGG
TTTGGTTATGGAGGGATTAGGAAGTAGAAGTGGAAGTAGTAGTAGCAGCA
GCAGCAGCAGTGGTGGTGGTGGATCGGGGATGGGGGGTCAGCAACAGCAT
CAGCAGAGCTCGATGTTGGGCATGGGGACTTCTTCACCTTTTGTCGGCCG
TGGAGGCGGGGGGGGTTGGGAGGGAGTGGAAACGTCTATGGCAAGAGCAG
TAGAGTGA
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protein sequence of NO02G01350.1

>NO02G01350.1-protein ID=NO02G01350.1-protein|Name=NO02G01350.1|organism=Nannochloropsis oceanica|type=polypeptide|length=411bp
MLSAPPTHYHTAFQQQLQDDTMAHSMDAATERRLRELPGNRVCADCPAPN
PQWASVSYGCFICLDCSGQHRALGVHLSFVRSITMDSWTDKQVKLMENGG
NEKLVSFLHQRGVEKSLPIHKKYNTPEAELYRERMKALVEGRELPTELPK
RVPAPVPSDGEGGGQVGSALEPLQGETEAQYVARQRQLNEEARQRMKAKF
GPAGLSGGGGGGRMQGFGSDPNYDPSKGGFGGGKGQDIGGEIMGAVGKLG
LTVQAHLQEGQLGQKLQMGWSNVSSRVQDPELAAKVKEKASTGWSALATG
AVALWSKTADLTVDLVKDITKEEEEPMRLYNRSGGEGAGRGGLVMEGLGS
RSGSSSSSSSSSGGGGSGMGGQQQHQQSSMLGMGTSSPFVGRGGGGGWEG
VETSMARAVE*
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Synonyms
Publications