NO02G01110, NO02G01110 (gene) Nannochloropsis oceanica

Overview
NameNO02G01110
Unique NameNO02G01110
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2554
Alignment locationchr2:350156..352709 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:350156..352709 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO02G01110 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL016nonsL016Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR032ncniR032Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR000ngnoR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK006724NSK006724Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO02G01110.1NO02G01110.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|573813gene_692Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO02G01110.1NO02G01110.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO02G01110 ID=NO02G01110|Name=NO02G01110|organism=Nannochloropsis oceanica|type=gene|length=2554bp
CTTTTTCTCCCACCCATCGTCCCTATCGACGACCGGACGCGCGAAGGAAG
CCAATGTGGCTACAGCGGCATTGCCGCTGCGGCAATCACAATCACTGGGA
ACTTGATAATCCCTGCGTTCCGAGCTCTTTCAGCACCGAATTATTTGCAT
GGTCTAAAATGAGTCCGCTATTCATCGCAGGGCCCTTTCTGCCTCCATGC
CTCCTCGACCTCCCCTTGGTACCAGAGACCGGCTCCAAACTAGTTCCTTG
GAGGTTCTGCATTCGGTTGAATCTTCCAGCGCTTTCTGCAGTGCGGGGTG
CGGGCCAAAAGATGATGCCCCATATGAAGACCCTCTGCACTAACAAGTAC
TGTAAGAAAATTGACCGGATCTCCTTGCTCTGTCGCAAAGCGACACAGTA
GTTCGGCAGCCCAGCCAATCCAGTCGTCATAGTCGAAACCGACAGGCGTC
TTAAATTCGTGGTGTTGCTTATCTACATCCTCGCAGAAAATCGGGTTGTG
GATTAATCGATGCGAAAACGTGACATCCGTTGCCAGCGCGAACGTCAAAA
TATGCCGGCAACATGTGGGCGCGGGTGGTAGGTGCATGCGCATGCTGCCC
AAGCAGCGCTTTGAATGATAGAAACACCCCACAGTGACGACAGTTGAATC
AAGACTGGACCAACGCGATTCGGTGTTGCCTTCTTTTGCGCGATCGATAA
TTTTCTAATAACGCAAAACGTCCTGCCCCTCAACGGCTGGCCCATCATCC
AATTTTTGTCTTCTTTTGATGGTCACGCCATACACTTTTTTTCGCTGGTG
GCACAGCTTACCCGCAGTCATCGAGATGAAAGCGAAAGGATAGCAAATCC
TTGACGTTGTGGTCCTGCAGTACTGCCCCCTTCACCCCTCGATTTTTTTG
CCAAAATGAAGGCAAAATTCAAGTAGAATGGTCTTACTAGTCAGTTCATT
GAGCCCTCATATCTCCTTCTTAAGATCAATTTCTGAGCAACTCAAAATTT
ATTGAAGGTGCATTCCCTTCAGAGCAAGATCATGCAGCCATTCTCATCGC
CTTACCGGCCCAGCACCCAGCATCTGCCCTTGAGTCCGTTTAGTCCTGCC
AAACATGCAGCTCACACTATCGCCCATGCGATTGCGAAGCGGAAACCCTT
CACCATCCCATCTTACATCTCCGCGGCATCGGAATCAAAAAATCCCTATA
TTCACGACTTTGAAAGTTTACGCCACGAAAATCGTCGGCTCAAGCTTGGA
CTGCGACAAAGCAGGGAAAAAACCCTGCTCCTCCAAACCAAGACCCAACG
CCTGGAAGCCGAAGTGAAACGGCGCGACAGACACATTGAGGTCCTACTCA
CAAATAATAAGAAGCCAGCAGCACTCATCTCAACGCCCCTTCGGCAGGAA
GTCCACAAGATTAGGCAGCACCAGGAAAGGAGCACGGCTATCAAGTCCTT
ACAGCAGGAGCTGGTGACCTTGCGCTCCACCGTGACAAGCTTAAAAGAGA
AGATGCGCTCCCCCAGGGCCAAAATCCTGGTTGAATTGACATCAGAGCGT
GATGAATACTTGGCCGAGGTGATGTATCTACGCGACGCCTTACAGGAGAT
CACTTCCGCAGAGGTGGAGAAAGTCGAGGCCGCGGCGACGAGAGGCCAGG
TCGTGCCCTTAGTCACCAGCTCGCCTGCGGCGGCGACCGAGGCTGAGAAG
AAAGCAAGCATGATAACCGCTGCAGAAATGGTGCCGCGAAAGCCAAAAGC
AATAACAATTAGCGAGCCGTATGACTCGTCGGCACCAGCGGAGGAAGGCT
GTGCCGCCCCGTTGGCAGCCACCACGACGCGAGCCCCACCAACAAACGAG
ACGATGGAGCGCGGAATCCTGCAGCCGCCACCGTTAAATTCATCGTCATC
ACTACCGTTCTCTTCCTCCTCTATACACCCCCCCAAATACGGTTCGTCCT
TTCAATCACTGCCTGTCCGCCCTCAGCAGATTTTTCGGGACTCAATTGTG
TTTCCCAAGCCGACACATTTGGAAGGCACCAAGCTTAACTCGATCTCTGA
GCATGGGCATGACACGGAGGATAGAGAGGGAGAGACAGTGACACCTGTGT
TGTTGGAGGAGGAGGGGCAGAAAGAGCAGGAGGAGGATCAACGAGAGGAG
GCGAAAGATGTCGGGGGTAGTGCTCAGACTGTGACCTCTTCTGTCACCTC
AAACGTACACGGACTGGCTATGGTGAAGGGAAATGGGCAGGAGGAGGAAG
AGCTGGAGGAAGGGGGGGCGTGCCTGTCTAGCTGTTCGCTGTATCTTTCC
CAGCTCTCACTTCTGGGTGTGCTCCTTGACCAGAGTCCCGGAGAGGAGGG
CCGAGAGACCTTGGAAGAGAGCAGGCAGCAAGAGCCCCGCTTGATGACAA
CGCTTGATATGGTGCCGATGGAGGAGGTGGAGGAAGGGGTAGAGAAAAAG
AAGGAAGAGGAAAGAATCAGGGAGATCAAGTAAGGGACGCGCGTGAGTGA
GTAGCAAACAGCGGGGATGAATGGAGAGAAACGGAATAGAAACAGCAGTC
GATG
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protein sequence of NO02G01110.1

>NO02G01110.1-protein ID=NO02G01110.1-protein|Name=NO02G01110.1|organism=Nannochloropsis oceanica|type=polypeptide|length=484bp
MQPFSSPYRPSTQHLPLSPFSPAKHAAHTIAHAIAKRKPFTIPSYISAAS
ESKNPYIHDFESLRHENRRLKLGLRQSREKTLLLQTKTQRLEAEVKRRDR
HIEVLLTNNKKPAALISTPLRQEVHKIRQHQERSTAIKSLQQELVTLRST
VTSLKEKMRSPRAKILVELTSERDEYLAEVMYLRDALQEITSAEVEKVEA
AATRGQVVPLVTSSPAAATEAEKKASMITAAEMVPRKPKAITISEPYDSS
APAEEGCAAPLAATTTRAPPTNETMERGILQPPPLNSSSSLPFSSSSIHP
PKYGSSFQSLPVRPQQIFRDSIVFPKPTHLEGTKLNSISEHGHDTEDREG
ETVTPVLLEEEGQKEQEEDQREEAKDVGGSAQTVTSSVTSNVHGLAMVKG
NGQEEEELEEGGACLSSCSLYLSQLSLLGVLLDQSPGEEGRETLEESRQQ
EPRLMTTLDMVPMEEVEEGVEKKKEEERIREIK*
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Synonyms
Publications