NO02G00980, NO02G00980 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO02G00980 vs. NCBI_GenBank
Match: EWM30547.1 (putative fkbp-type peptidyl-prolyl cis-trans isomerase chloroplastic-like protein [Nannochloropsis gaditana]) HSP 1 Score: 338.2 bits (866), Expect = 2.000e-89 Identity = 166/185 (89.73%), Postives = 174/185 (94.05%), Query Frame = 0 Query: 43 LEAEGGMSRRDAFLKTAGLLSLGLVAGSTGGLPFLPRAGAESLPSGITYEVVENGNGPVPKVGELAAIRFTGAYKGNVFDDLYKTKEPLYFRVGGNTLLKGIEEAVKVMKVGDRWKLTIPGELAFGAKGRSASPGKPRIPPMAAVEYDLTLVALPGRETEILDLDNFDENAPASDDSDPNKGLRF 228 LEAEGGMSRRDA KTAGLLSLGL GS+ GL LPRAGAE+LP GITYEV+E GNGP+P+VGELAAIRFTGAYK NVFDDLYKTKEPLYFRVGGNTLLKGIEEAVKVMKVGDRWKLTIPGELAFGAKGRSASPGKPRIPPMA VEYDLTLVALPGRETE++DLD+FDENAPASDDSDPNKGLRF Sbjct: 45 LEAEGGMSRRDALFKTAGLLSLGLAMGSSRGLISLPRAGAETLPGGITYEVLEKGNGPIPQVGELAAIRFTGAYKDNVFDDLYKTKEPLYFRVGGNTLLKGIEEAVKVMKVGDRWKLTIPGELAFGAKGRSASPGKPRIPPMAPVEYDLTLVALPGRETEVIDLDSFDENAPASDDSDPNKGLRF 229
BLAST of NO02G00980 vs. NCBI_GenBank
Match: GAX11545.1 (peptidylprolyl isomerase [Fistulifera solaris]) HSP 1 Score: 157.5 bits (397), Expect = 4.800e-35 Identity = 77/155 (49.68%), Postives = 106/155 (68.39%), Query Frame = 0 Query: 52 RDAFLKTAGLLSLGLVAGSTGGLPFLPRAGAESLPSGITYEVVENGNGPVPKVGELAAIRFTGAYKGNVFDDLYKTKEPLYFRVGGNTLLKGIEEAVKVMKVGDRWKLTIPGELAFGAKGRSASPGKPRIPPMAAVEYDLTLVALPGRETEILDL 207 R AF ++A ++ +VA S+ AE+LP+G+TYEV + G+GP P++GELAAIRF N DD++ T EP Y R+G LLKG+EE + +M++GDRW+LTIP ELAFG KGR AS GKPRI A + +D+ +V LPGRE E+++L Sbjct: 28 RQAFWQSAAAGAVAVVAASS-------PVQAETLPNGVTYEVKKKGDGPQPEIGELAAIRFAAYNGANKIDDIFDTPEPYYTRIGSGGLLKGVEETLPLMRLGDRWELTIPSELAFGKKGRPASAGKPRIAGDAVITFDVEMVGLPGREIELIEL 175
BLAST of NO02G00980 vs. NCBI_GenBank
Match: GAX12950.1 (peptidylprolyl isomerase [Fistulifera solaris]) HSP 1 Score: 155.6 bits (392), Expect = 1.800e-34 Identity = 82/175 (46.86%), Postives = 114/175 (65.14%), Query Frame = 0 Query: 36 LARGLVALEA----EGGMSRRDAFLKTAGLLSLGLVAGSTGGLPFLPRAGAESLPSGITYEVVENGNGPVPKVGELAAIRFTGAYKGNVFDDLYKTKEPLYFRVGGNTLLKGIEEAVKVMKVGDRWKLTIPGELAFGAKGRSASPGKPRIPPMAAVEYDLTLVALPGRETEILDL 207 LA L A+ A + + R AF ++A ++ +VA S AE+LP+G+TYEV + G+GP P++GELAAIRF N DD+++T EP Y R+G LLKG+EE + +M++GDRW+LTIP ELAFG KGR AS GKPRI A + +D+ +V LPGRE E+++L Sbjct: 8 LATCLTAVSAWTTPQNSVVTRQAFWQSAA--AVAVVAASA-------PVQAETLPNGVTYEVKKKGDGPQPEIGELAAIRFAAYNGANKIDDIFETPEPYYTRIGSGGLLKGVEETLPLMRLGDRWELTIPSELAFGKKGRPASAGKPRIAGDAVITFDVEMVGLPGREIELIEL 173
BLAST of NO02G00980 vs. NCBI_GenBank
Match: XP_009033352.1 (hypothetical protein AURANDRAFT_17047, partial [Aureococcus anophagefferens] >EGB12289.1 hypothetical protein AURANDRAFT_17047, partial [Aureococcus anophagefferens]) HSP 1 Score: 147.5 bits (371), Expect = 5.000e-32 Identity = 68/117 (58.12%), Postives = 89/117 (76.07%), Query Frame = 0 Query: 88 GITYEVVE-NGNGPVPKVGELAAIRFTGAYKGNVFDDLYKTKEPLYFRVGGNTLLKGIEEAVKVMKVGDRWKLTIPGELAFGAKGRSASPGKPRIPPMAAVEYDLTLVALPGRETEI 204 G+ YEV++ N NG +PK+G+L AIRF G+ +G VFDD+ KT EPLY+RVGG +L+KGI+EAV +M G+ W LTIPG+L FG KGRSAS GKPRIPP A + Y++ V PG E ++ Sbjct: 1 GLKYEVIKSNPNGAIPKIGDLIAIRFKGSTEGRVFDDITKTDEPLYYRVGGGSLIKGIDEAVTLMHYGETWGLTIPGDLGFGPKGRSASAGKPRIPPNAELYYEVQFVGFPGFEGDL 117
BLAST of NO02G00980 vs. NCBI_GenBank
Match: EJK47918.1 (hypothetical protein THAOC_33332 [Thalassiosira oceanica]) HSP 1 Score: 146.7 bits (369), Expect = 8.500e-32 Identity = 70/157 (44.59%), Postives = 99/157 (63.06%), Query Frame = 0 Query: 50 SRRDAFLKTAGLLSLGLVAGSTGGLPFLPRAGAESLPSGITYEVVENGNGPVPKVGELAAIRFTGAYKGNVFDDLYKTKEPLYFRVGGNTLLKGIEEAVKVMKVGDRWKLTIPGELAFGAKGRSASPGKPRIPPMAAVEYDLTLVALPGRETEILDL 207 SR + + +V + GG +P E LPSG++ +V ++GNGP P++GE+AAIRF N DD+++T EP Y R+G L+KG+EE + M VGDRW LT+PG LAFG GR AS GKPRIP + +D+ +V LPG+E E++D+ Sbjct: 34 SRTEFLRDVTATVGASVVVSTLGG---MPAYADEVLPSGVSIKVEKSGNGPAPEIGEMAAIRFRAFAGENKIDDIFETPEPYYTRIGSGGLIKGVEEVLPKMVVGDRWVLTVPGPLAFGPAGRKASAGKPRIPGNQEIIFDVEMVGLPGKEQELIDI 187
BLAST of NO02G00980 vs. NCBI_GenBank
Match: XP_002290289.1 (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >EED92041.1 predicted protein, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 145.6 bits (366), Expect = 1.900e-31 Identity = 67/119 (56.30%), Postives = 86/119 (72.27%), Query Frame = 0 Query: 88 GITYEVVENGNGPVPKVGELAAIRFTGAYKGNVFDDLYKTKEPLYFRVGGNTLLKGIEEAVKVMKVGDRWKLTIPGELAFGAKGRSASPGKPRIPPMAAVEYDLTLVALPGRETEILDL 207 G+ +VV++GNGP P +GELAAIRF N DD++ T EP Y RVG L+KG+EE + M+VGDRW LTIPGELAFG KGR AS GKPRIP A + +D+ +V LPG+E E+++L Sbjct: 1 GVAIKVVKSGNGPEPGIGELAAIRFQSFAGENKIDDIFDTPEPYYTRVGSGGLIKGVEEVLPKMRVGDRWVLTIPGELAFGPKGRPASAGKPRIPSNAVITFDVEMVGLPGKEPELIEL 119
BLAST of NO02G00980 vs. NCBI_GenBank
Match: CEL93612.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 143.3 bits (360), Expect = 9.400e-31 Identity = 67/131 (51.15%), Postives = 92/131 (70.23%), Query Frame = 0 Query: 87 SGITYEVVENGNGPVPKVGELAAIRFTGAYKGNVFDDLYKTKEPLYFRVGGNTLLKGIEEAVKVMKVGDRWKLTIPGELAFGAKGRSASPGKPRIPPMAAVEYDLTLVALPGRETEILDLDNFDENAPASD 218 SG+ Y V+++G GP + G+L IRF G YK V DDL++T EP Y R G L+ G+EEA+ +M+VGDRWKL +PG LAFG +GRS +PG+PRIPP A +EY++ +V +PG+ + LDL D + P SD Sbjct: 32 SGLAYSVLKSGEGPKVEAGDLVVIRFRGQYKNIVIDDLFRTSEPYYARAAGGKLVAGLEEALLMMRVGDRWKLKVPGALAFGQQGRSPAPGRPRIPPNAPIEYEMLVVDIPGK-GDPLDLYFGDTDQPDSD 161
BLAST of NO02G00980 vs. NCBI_GenBank
Match: XP_005766282.1 (hypothetical protein EMIHUDRAFT_48468, partial [Emiliania huxleyi CCMP1516] >EOD13853.1 hypothetical protein EMIHUDRAFT_48468, partial [Emiliania huxleyi CCMP1516]) HSP 1 Score: 142.5 bits (358), Expect = 1.600e-30 Identity = 68/121 (56.20%), Postives = 89/121 (73.55%), Query Frame = 0 Query: 88 GITYEVVENGNGPVPKVGELAAIRFTGAYK--GNVFDDLYKTKEPLYFRVGGNTLLKGIEEAVKVMKVGDRWKLTIPGELAFGAKGRSASPGKPRIPPMAAVEYDLTLVALPGRETEILDL 207 G+TY V+++G G P G+L AIRF G K G VFDD+ ++ E YFRVG ++L G+EEAVK+M GD W LTIPG+LAFG KGRSASPGKPRIP A + + L LVA+PG++ E+L++ Sbjct: 1 GLTYNVIKSGKGGQPATGDLIAIRFKGTIKSSGQVFDDIMESAEAYYFRVGSGSVLPGVEEAVKLMHTGDVWDLTIPGKLAFGDKGRSASPGKPRIPSNAEIGFLLELVAVPGKDDELLEV 121
BLAST of NO02G00980 vs. NCBI_GenBank
Match: CBJ30323.1 (putative FKBP-type peptidyl-prolyl cis-trans isomerase 2 [Ectocarpus siliculosus]) HSP 1 Score: 140.6 bits (353), Expect = 6.100e-30 Identity = 78/177 (44.07%), Postives = 105/177 (59.32%), Query Frame = 0 Query: 41 VALEAEGGMSR-RDAFLKTAGLLSLGLVAGSTGGLPFLPRAGAESLPSGITYEVVENGNGPVPKVGELAAIRFTGAYKGNVFDDLYKTKEPLYFRVGGNTLLKGIEEAVKVMKVGDRWKLTIPGELAFGAKGRSASPGKPRIPPMAAVEYDLTLVALPGRETEILDL---DNFDENA 214 +AL EGG + R L+T +L A T + + + SG+ + G GPV + G+L +RF G Y FD+++ T EP Y R G TL+KG+EEA+ +M+VGD+W+LT P LAFG KGR SPG+PRIPP A VEY L LVALPG+E +I++ D F NA Sbjct: 47 MALSPEGGQGQSRGELLQTVWKTALTAGAAQTLLASSVLAEDSLTTASGLKINKLVQGKGPVAEQGDLIGVRFKGNYGTYEFDNIFNTAEPYYMRAGVGTLVKGVEEALLMMRVGDKWQLTCPANLAFGNKGRPPSPGRPRIPPGADVEYTLELVALPGKEEDIVEQRTGDTFSGNA 223
BLAST of NO02G00980 vs. NCBI_GenBank
Match: XP_005535436.1 (probable FKBP-type peptidyl-prolyl cis-trans isomerase [Cyanidioschyzon merolae strain 10D] >BAM79150.1 probable FKBP-type peptidyl-prolyl cis-trans isomerase [Cyanidioschyzon merolae strain 10D]) HSP 1 Score: 139.0 bits (349), Expect = 1.800e-29 Identity = 63/115 (54.78%), Postives = 80/115 (69.57%), Query Frame = 0 Query: 92 EVVENGNGPVPKVGELAAIRFTGAYKGNVFDDLYKTKEPLYFRVGGNTLLKGIEEAVKVMKVGDRWKLTIPGELAFGAKGRSASPGKPRIPPMAAVEYDLTLVALPGRETEILDL 207 +V+E G GP P+ G+L IRF AY G VFDD+ + EP Y RVG L+KG+EEAVK M VGD W+L +P AFG+KGR SPGKP IPP A V Y++ L +PGRE E+L++ Sbjct: 90 QVLEKGTGPQPQTGDLVGIRFRAAYNGRVFDDIMDSSEPFYMRVGSGNLVKGVEEAVKRMHVGDLWRLELPPAYAFGSKGRKPSPGKPAIPPNATVVYEVRLDEVPGREQELLEV 204 The following BLAST results are available for this feature:
BLAST of NO02G00980 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G00980 ID=NO02G00980|Name=NO02G00980|organism=Nannochloropsis oceanica|type=gene|length=684bpback to top protein sequence of NO02G00980.1 >NO02G00980.1-protein ID=NO02G00980.1-protein|Name=NO02G00980.1|organism=Nannochloropsis oceanica|type=polypeptide|length=228bpback to top Synonyms
Publications
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