NO02G00850, NO02G00850 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO02G00850 vs. NCBI_GenBank
Match: EWM30570.1 (protein of unknown function DUF4033 [Nannochloropsis gaditana] >EWM30571.1 protein of unknown function DUF4033 [Nannochloropsis gaditana]) HSP 1 Score: 325.1 bits (832), Expect = 2.200e-85 Identity = 157/203 (77.34%), Postives = 175/203 (86.21%), Query Frame = 0 Query: 81 LFGLGGRSDNKNKSSPTGMKAPTPRPFAPENMATYDDDLFAKIWIFLFSGKIAAVVGVPSPRRFIEYEEYVRLSQLLLKAGSTKAKTAVLTVLRSIAFPGFSSIFRTLFPGTSRFACEFNAKVTPVFFSWLVGPAVVETSEMRNPKTDEVEVWANSVKIQRCRYLESVQCKGACASICKLPTQAFFTEDLGMPVTMTPNFDDL 284 LFG GG+ NK+S G + P+PFAPE M Y+DD+FAKIWIFLF+GKIAAVVG PSPR FI YEEYVRLS+LLL+ GSTKAK+AVL+VLRSIAFPGFSSIFR LFPG+SR ACEFNA+VTP+FFSWLVGPA VETSEM NP T E+W+NSVKI+RCRYLESVQCKGAC SICKLPTQ FFTEDLGMPVTMTPNF+DL Sbjct: 110 LFGFGGKDSQTNKNS--GNSSLKPKPFAPERMVKYNDDIFAKIWIFLFTGKIAAVVGAPSPRNFIPYEEYVRLSRLLLRGGSTKAKSAVLSVLRSIAFPGFSSIFRALFPGSSRLACEFNARVTPIFFSWLVGPAKVETSEMLNPVTGARELWSNSVKIERCRYLESVQCKGACVSICKLPTQTFFTEDLGMPVTMTPNFEDL 310
BLAST of NO02G00850 vs. NCBI_GenBank
Match: XP_005853551.1 (hypothetical protein NGA_0357502 [Nannochloropsis gaditana CCMP526] >EKU22810.1 hypothetical protein NGA_0357502 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 293.1 bits (749), Expect = 9.200e-76 Identity = 147/203 (72.41%), Postives = 162/203 (79.80%), Query Frame = 0 Query: 81 LFGLGGRSDNKNKSSPTGMKAPTPRPFAPENMATYDDDLFAKIWIFLFSGKIAAVVGVPSPRRFIEYEEYVRLSQLLLKAGSTKAKTAVLTVLRSIAFPGFSSIFRTLFPGTSRFACEFNAKVTPVFFSWLVGPAVVETSEMRNPKTDEVEVWANSVKIQRCRYLESVQCKGACASICKLPTQAFFTEDLGMPVTMTPNFDDL 284 LFG GG+ NK+S G + P+PFAPE M Y+DD+FAKIWIFLF+GKIAAVVG PSPR FI YEEYVRLS+LLL+ GSTKAK+AVL+VLRSIAFPGFSSIFR LFPG+SR ACEFNA+VTP+FFSWLVGPA VETSEM NP T YLESVQCKGAC SICKLPTQ FFTEDLGMPVTMTPNF+DL Sbjct: 110 LFGFGGKDSQTNKNS--GNSSLKPKPFAPERMVKYNDDIFAKIWIFLFTGKIAAVVGAPSPRNFIPYEEYVRLSRLLLRGGSTKAKSAVLSVLRSIAFPGFSSIFRALFPGSSRLACEFNARVTPIFFSWLVGPAKVETSEMLNPVT----------------YLESVQCKGACVSICKLPTQTFFTEDLGMPVTMTPNFEDL 294
BLAST of NO02G00850 vs. NCBI_GenBank
Match: ABK23534.1 (unknown [Picea sitchensis]) HSP 1 Score: 136.3 bits (342), Expect = 1.400e-28 Identity = 81/205 (39.51%), Postives = 115/205 (56.10%), Query Frame = 0 Query: 80 HLFGLGGRSDNKNKSSPTGMKAPTPRPFAPENMATYDDDLFAKIWIFLFSGKIAAVVGVPSPRRFIEYEEYVRLSQLLLKAGSTK-AKTAVLTVLRSIAFPGFSSIFRTLFPGTSRFACEFNAKVTPVFFSWLVGPAVVETSEMRNPKTDEVEVWANSVKIQRCRYLESVQCKGACASICKLPTQAFFTEDLGMPVTMTPNFDDL 284 H FGL + G+ P+ +P Y+D+LF K+++ LF+ K+ + G S R YE +V S+ ++ + K + AV VL S+ PG FR LFP T ++A EFNA VT FF WLVGP+ V E+ K + V I++CRYLE+ C G C ++CKLPTQ FFT + G+P+TMTPNF+D+ Sbjct: 32 HSFGL-----RRKMIIECGIAEPSGQPAPMGQKTRYNDNLFDKVFMALFARKMNNIAGGKSTGREEGYERFVETSRSVMLGRTPKQQQEAVRQVLLSMLPPGAPERFRKLFPPT-KWAAEFNAAVTAPFFHWLVGPSEVVEVEVNGVKQ------KSGVHIKKCRYLENSGCVGMCVNMCKLPTQDFFTNEFGLPLTMTPNFEDM 224
BLAST of NO02G00850 vs. NCBI_GenBank
Match: XP_021289593.1 (beta-carotene isomerase D27, chloroplastic [Herrania umbratica]) HSP 1 Score: 131.0 bits (328), Expect = 6.000e-27 Identity = 75/194 (38.66%), Postives = 108/194 (55.67%), Query Frame = 0 Query: 98 GMKAPTPRPFAPENMATYDDDLFAKIWIFLFSGKIAAVVGVPSPRRF-------IEYEEYVRLSQLLLKAGS-TKAKTAVLTVLRSIAFPGFSSIFRTLFPGTSRFACEFNAKVTPVFFSWLVGPAVVETSEMRNPKTDEVEVWANSVKIQRCRYLESVQCKGACASICKLPTQAFFTEDLGMPVTMTPNFDDL 284 G+ P+ P Y+D LF K ++ LF+ K+ P +YE +V +SQ +++ S + + V VL S+ PG + FR LFP T R+A EFNA +T FF+WLVGP+ V E+ K + V I++CRYLE+ C G C ++CK+PTQ FFT D G+P+TMTPNF+D+ Sbjct: 32 GIAEPSGEPAPLGQKTKYNDGLFEKAFMTLFARKMEKFAAAPKAGEVAKKGWFEYDYESFVEVSQRVMQGRSRLQQQQVVREVLLSMLPPGAPAQFRKLFPPT-RWAAEFNAALTVPFFNWLVGPSEVVEVEVNGVKQ------KSGVHIKKCRYLENSGCAGMCVNMCKIPTQDFFTNDFGLPLTMTPNFEDM 218
BLAST of NO02G00850 vs. NCBI_GenBank
Match: XP_024366701.1 (beta-carotene isomerase D27, chloroplastic-like [Physcomitrella patens] >PNR27019.1 hypothetical protein PHYPA_030500 [Physcomitrella patens]) HSP 1 Score: 129.4 bits (324), Expect = 1.800e-26 Identity = 74/187 (39.57%), Postives = 112/187 (59.89%), Query Frame = 0 Query: 98 GMKAPTPRPFAPENMATYDDDLFAKIWIFLFSGKIAAVVGVPSPRRFIEYEEYVRLSQLLLKAGSTKAKTAVL-TVLRSIAFPGFSSIFRTLFPGTSRFACEFNAKVTPVFFSWLVGPAVVETSEMRNPKTDEVEVWANSVKIQRCRYLESVQCKGACASICKLPTQAFFTEDLGMPVTMTPNFDDL 284 G+ P+ +P + Y+D++ K +I LF K+ A +G S + YE +V +S+ +++ + + AV+ VL S+ PG + FR LFP T +++ EFNA VT FF WLVGPA + E+ K + VKI +CRYLE+ C G C ++CK+PTQ FFT + G+P+TMTPNF+D+ Sbjct: 39 GVAEPSGKPAPFGQITRYNDNILDKAFIALFRRKMEANLGKTS--KMQGYEGFVDVSKKIMQGRTAVEQRAVVRDVLLSLLPPGAPAQFRKLFPPT-KWSAEFNAAVTVPFFQWLVGPAELMEIEVNGVKQ------MSGVKITKCRYLENSGCVGMCVNMCKIPTQDFFTNEFGLPLTMTPNFEDM 216
BLAST of NO02G00850 vs. NCBI_GenBank
Match: EOY23879.1 (Uncharacterized protein TCM_015633 isoform 1 [Theobroma cacao]) HSP 1 Score: 128.6 bits (322), Expect = 3.000e-26 Identity = 74/194 (38.14%), Postives = 108/194 (55.67%), Query Frame = 0 Query: 98 GMKAPTPRPFAPENMATYDDDLFAKIWIFLFSGKIAAVVGVPSPRR-------FIEYEEYVRLSQLLLKAGS-TKAKTAVLTVLRSIAFPGFSSIFRTLFPGTSRFACEFNAKVTPVFFSWLVGPAVVETSEMRNPKTDEVEVWANSVKIQRCRYLESVQCKGACASICKLPTQAFFTEDLGMPVTMTPNFDDL 284 G+ P+ P Y+D LF K +I LF+ K+ P +YE +V +SQ +++ S + + V VL S+ PG + FR LFP T ++A EFNA +T FF+WLVGP+ V E+ K + V I++CRYLE+ C G C ++CK+PTQ FFT + G+P+TMTPNF+D+ Sbjct: 32 GIAEPSGEPAPLGQKTKYNDGLFEKAFITLFARKMEKFATAPKAGEEAKKGWFVYDYESFVEVSQRVMQGRSRLQQQQVVREVLLSMLPPGAPAQFRKLFPPT-KWAAEFNAALTVPFFNWLVGPSEVVEVEVNGVKQ------KSGVHIKKCRYLENSGCAGMCVNMCKIPTQDFFTNEFGLPLTMTPNFEDM 218
BLAST of NO02G00850 vs. NCBI_GenBank
Match: XP_007039378.2 (PREDICTED: beta-carotene isomerase D27, chloroplastic [Theobroma cacao]) HSP 1 Score: 128.6 bits (322), Expect = 3.000e-26 Identity = 74/194 (38.14%), Postives = 108/194 (55.67%), Query Frame = 0 Query: 98 GMKAPTPRPFAPENMATYDDDLFAKIWIFLFSGKIAAVVGVPSPRR-------FIEYEEYVRLSQLLLKAGS-TKAKTAVLTVLRSIAFPGFSSIFRTLFPGTSRFACEFNAKVTPVFFSWLVGPAVVETSEMRNPKTDEVEVWANSVKIQRCRYLESVQCKGACASICKLPTQAFFTEDLGMPVTMTPNFDDL 284 G+ P+ P Y+D LF K +I LF+ K+ P +YE +V +SQ +++ S + + V VL S+ PG + FR LFP T ++A EFNA +T FF+WLVGP+ V E+ K + V I++CRYLE+ C G C ++CK+PTQ FFT + G+P+TMTPNF+D+ Sbjct: 32 GIAEPSGEPAPLGQKTKYNDGLFEKAFITLFARKMEKFAAAPKAGDEAKKGWFVYDYESFVEVSQRVMQGRSRLQQQQVVREVLLSMLPPGAPAQFRKLFPPT-KWAAEFNAALTVPFFNWLVGPSEVVEVEVNGVKQ------KSGVHIKKCRYLENSGCAGMCVNMCKIPTQDFFTNEFGLPLTMTPNFEDM 218
BLAST of NO02G00850 vs. NCBI_GenBank
Match: XP_024536310.1 (beta-carotene isomerase D27, chloroplastic [Selaginella moellendorffii] >XP_024536311.1 beta-carotene isomerase D27, chloroplastic [Selaginella moellendorffii]) HSP 1 Score: 128.6 bits (322), Expect = 3.000e-26 Identity = 71/183 (38.80%), Postives = 104/183 (56.83%), Query Frame = 0 Query: 102 PTPRPFAPENMATYDDDLFAKIWIFLFSGKIAAVVGVPSPRRFIEYEEYVRLSQLLLKAGS-TKAKTAVLTVLRSIAFPGFSSIFRTLFPGTSRFACEFNAKVTPVFFSWLVGPAVVETSEMRNPKTDEVEVWANSVKIQRCRYLESVQCKGACASICKLPTQAFFTEDLGMPVTMTPNFDDL 284 P+ +P Y D +F + ++ LFS K+ + G + + Y+ +V +S+ +LK + + + V V SI PG FR LFP T ++ACEFNA +T FF WLVGP E+ K + + VKI +CRYLE+ C G C ++CK+PTQ FT D G+P+TMTPNF+D+ Sbjct: 22 PSGKPAPMGQKTRYKDSIFDRAFMSLFSRKMESATGRATNKP--GYDGFVDVSRGVLKGRTPVEQRALVRQVFLSIMPPGAPETFRKLFPPT-KWACEFNAAITVPFFQWLVGPCETFEVEVNGVKQN------SGVKILKCRYLENSSCAGMCVNVCKIPTQDLFTNDFGLPLTMTPNFEDM 195
BLAST of NO02G00850 vs. NCBI_GenBank
Match: EFJ23359.1 (hypothetical protein SELMODRAFT_103856 [Selaginella moellendorffii]) HSP 1 Score: 127.9 bits (320), Expect = 5.100e-26 Identity = 72/183 (39.34%), Postives = 104/183 (56.83%), Query Frame = 0 Query: 102 PTPRPFAPENMATYDDDLFAKIWIFLFSGKIAAVVGVPSPRRFIEYEEYVRLSQLLLKA-GSTKAKTAVLTVLRSIAFPGFSSIFRTLFPGTSRFACEFNAKVTPVFFSWLVGPAVVETSEMRNPKTDEVEVWANSVKIQRCRYLESVQCKGACASICKLPTQAFFTEDLGMPVTMTPNFDDL 284 P+ +P Y D +F + ++ LF+ K+ G S + Y+ +V +S+ +L+ + + V VL SI PG FR LFP T ++ACEFNA +T FF WLVGP E+ K + + VKI +CRYLE+ C G C ++CK+PTQ FFT D G+P+TMTPNF+D+ Sbjct: 19 PSGKPAPMGQKTRYKDSIFDRAFMSLFARKMENATGRASKK--TGYDGFVDVSRGVLQGRNPVEQRALVREVLLSIMPPGAPETFRKLFPPT-KWACEFNAAITVPFFQWLVGPCERFEVEVNGVKQN------SGVKILKCRYLENSNCVGMCVNMCKIPTQDFFTNDFGLPLTMTPNFEDM 192
BLAST of NO02G00850 vs. NCBI_GenBank
Match: XP_002975730.2 (beta-carotene isomerase D27, chloroplastic [Selaginella moellendorffii]) HSP 1 Score: 127.9 bits (320), Expect = 5.100e-26 Identity = 72/183 (39.34%), Postives = 104/183 (56.83%), Query Frame = 0 Query: 102 PTPRPFAPENMATYDDDLFAKIWIFLFSGKIAAVVGVPSPRRFIEYEEYVRLSQLLLKA-GSTKAKTAVLTVLRSIAFPGFSSIFRTLFPGTSRFACEFNAKVTPVFFSWLVGPAVVETSEMRNPKTDEVEVWANSVKIQRCRYLESVQCKGACASICKLPTQAFFTEDLGMPVTMTPNFDDL 284 P+ +P Y D +F + ++ LF+ K+ G S + Y+ +V +S+ +L+ + + V VL SI PG FR LFP T ++ACEFNA +T FF WLVGP E+ K + + VKI +CRYLE+ C G C ++CK+PTQ FFT D G+P+TMTPNF+D+ Sbjct: 21 PSGKPAPMGQKTRYKDSIFDRAFMSLFARKMENATGRASKK--TGYDGFVDVSRGVLQGRNPVEQRALVREVLLSIMPPGAPETFRKLFPPT-KWACEFNAAITVPFFQWLVGPCERFEVEVNGVKQN------SGVKILKCRYLENSNCVGMCVNMCKIPTQDFFTNDFGLPLTMTPNFEDM 194 The following BLAST results are available for this feature:
BLAST of NO02G00850 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
The following polypeptide feature(s) derives from this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G00850 ID=NO02G00850|Name=NO02G00850|organism=Nannochloropsis oceanica|type=gene|length=2838bpback to top protein sequence of NO02G00850.1 >NO02G00850.1-protein ID=NO02G00850.1-protein|Name=NO02G00850.1|organism=Nannochloropsis oceanica|type=polypeptide|length=332bpback to top protein sequence of NO02G00850.2 >NO02G00850.2-protein ID=NO02G00850.2-protein|Name=NO02G00850.2|organism=Nannochloropsis oceanica|type=polypeptide|length=332bpback to top protein sequence of NO02G00850.3 >NO02G00850.3-protein ID=NO02G00850.3-protein|Name=NO02G00850.3|organism=Nannochloropsis oceanica|type=polypeptide|length=285bpback to top protein sequence of NO02G00850.4 >NO02G00850.4-protein ID=NO02G00850.4-protein|Name=NO02G00850.4|organism=Nannochloropsis oceanica|type=polypeptide|length=285bpback to top Synonyms
Publications
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