NO02G00650, NO02G00650 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO02G00650 vs. NCBI_GenBank
Match: EWM30599.1 (core-2 i-branching enzyme [Nannochloropsis gaditana]) HSP 1 Score: 336.7 bits (862), Expect = 1.300e-88 Identity = 165/226 (73.01%), Postives = 190/226 (84.07%), Query Frame = 0 Query: 28 RMALVLLLSLAGDGQLLA--SSSSVGACRADATPLPSYEDVGLIDRPSPGKVAYGVMVYQQQNKTVADVLGQFTRLFDAIYFPSFTFVVHVDIKSDPALIDLITEYVQGF-EQASMIPSVSVSWGGVTVVERTLALMQAALERDQEWEYFVNIGQEDYPLERPEVIRNFLAHSTPPATNFIYCWDLRGHDFFGQWEHHQGRVSRVFVDLFNGKSREVDGVSRPTPK 251 R A +LLL L+GDGQL S++ G CRAD SY++VGL+DRPSPGKVAYGVMVYQ+QNKTV+DV QFTRLFDAIY P+FT VVHVDIKS+PALI+ IT+YV+ QAS IPSVSVSWGG+TVVERTLALMQAALE D EWEYFVNIGQEDYPL+ P I+ +LAH+ PPATNFIYCWDLRGHDFFGQWEHH+GRVS+VFVD+F+G+SREV G+ R PK Sbjct: 23 RTASLLLLFLSGDGQLFVHRSANYKGTCRADTLSNVSYKEVGLVDRPSPGKVAYGVMVYQRQNKTVSDVFDQFTRLFDAIYSPNFTCVVHVDIKSEPALIEKITDYVKKHAPQASTIPSVSVSWGGITVVERTLALMQAALESDPEWEYFVNIGQEDYPLQSPAAIQEYLAHAVPPATNFIYCWDLRGHDFFGQWEHHEGRVSKVFVDMFDGRSREVRGLPRSPPK 248
BLAST of NO02G00650 vs. NCBI_GenBank
Match: CBN75267.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 221.1 bits (562), Expect = 8.200e-54 Identity = 143/374 (38.24%), Postives = 189/374 (50.53%), Query Frame = 0 Query: 22 MCASLVRMALVLLLSLAGDGQLLASSS---SVGACRADATPLPSYEDVGLIDRPSPG-KVAYGVMVYQQQNKTVADVLGQFTRLFDAIYFPSFTFVVHVDIKSDPALIDLITEYVQGFEQASMIPSVSVSWGGVTVVERTLALMQAALERDQEWEYFVNIGQEDYPLERPEVIRNFLAHSTPPATNFIYCWDLRGHDFFGQWEHHQGRVSRVFVDLFNGKSREVDGVSRPT-----PK-EYTFYKSLQQTALSRAFVSTAVYSPEARRLLLYLATSEAPDEIFFPTLLHLPPFSAHASRATCNGTLHFSHWIRPGGSWHPEYLTPIHLPLLLEKMRGGSXXXXXXXSGLPTFWARKFDVGKGSSTLMDTLDFQR 386 +C L+ L + G G A+++ GA R P D G+ G ++AYG+MVYQ++ + L QF R+ A+Y T+V+HVDIKSD AL+D I+ +++ N+ +EDYP +R +L TNFI CW + GHDFFGQ E H+ RV V VD F G +E +S T PK +Y F+KSLQQT LSR A++S EARRLLLY+ATS+APDE++FPTL L ++S ATCN T HFS+WIRPGGSWHPEYLT H PL+ F+ RK + +GS L+DTLD R Sbjct: 7 VCLGLLWCGLQIPALAKGRGGRAATAAVAFGEGAERRQLAATPRAGDGGVNRSGDVGPRLAYGIMVYQRKGYSPQTTLDQFGRMLKALYDEENTYVIHVDIKSDKALLDAISHHIKDLP---------------------------------------NVYEEDYPSASQAEMRRWL-KDQKDGTNFIKCWPIEGHDFFGQMERHEQRVQDVNVDDFMGGVKEYRTMSGNTGSQERPKTDYKFFKSLQQTMLSRQLTEYAIHSSEARRLLLYMATSKAPDELYFPTLTQLD--ERYSSMATCNDTRHFSYWIRPGGSWHPEYLTLDHFPLV---------------HNATEFYIRKVEDARGSKPLLDTLDILR 323
BLAST of NO02G00650 vs. NCBI_GenBank
Match: ODU32633.1 (glycosyl transferase [Sphingopyxis sp. SCN 67-31]) HSP 1 Score: 112.8 bits (281), Expect = 3.100e-21 Identity = 87/289 (30.10%), Postives = 133/289 (46.02%), Query Frame = 0 Query: 97 QFTRLFDAIYFPSFTFVVHVDIKSDPALIDLITEYVQGFEQASMIPSVSVSWGGVTVVERTLALMQAALERDQEWEYFVNIGQEDYPLERPEVIRNFL-AHSTPPATNFIYCWDLRGHDFFGQWEHHQGRVSRVFVDLFNGKSREVDGVSRPTPKEYTFYKSLQQTALSRAFVSTAVYSPEARRLLLYLATSEAPDEIFFPTLLHLPPFSAHASRATCNGTLHFSHWIRPGG-SWHPE-YLTPIHLPLLLEKMRGGSXXXXXXXSGLPTFWARKFDVGKGSSTLMDTLD 383 QF R+F AIY P ++V+HVD S P I ++++ ++ +MI S WGG ++V+ L M+ L+ ++ W +++N+ +D+PL+ IR+FL AH P FI D R RVS +FV+ + RP K+ T Y Q A++R+F AV+ P A R + S PDE FF TL+ ++ A N L W+ G P ++ L L L P +ARKFD G+ +T+ D L+ Sbjct: 20 QFKRMFRAIYAPGNSYVIHVDKGSGPEFAADIADFLKPYQGVAMIESKQALWGGYSLVDAELRGMKKLLKMNRGWTHYINLSGQDFPLKSQAYIRDFLRAH---PRRQFIRALDQR-----KMRPDTMNRVSHIFVEALG--RMFFTRLPRPFLKDATPYIGTQWKAVTRSFCHFAVHHPSAERFKTFYRRSFIPDEAFFQTLM----MNSRALGEVMNDDLRTIDWVPDGDIKLRPRTFVAADALRLTLS----------------PDLFARKFDAGE-DATIFDLLE 277
BLAST of NO02G00650 vs. NCBI_GenBank
Match: WP_056368799.1 (MULTISPECIES: glycosyl transferase [Sphingopyxis] >KQZ77116.1 glycosyl transferase [Sphingopyxis sp. Root154] >KRC08998.1 glycosyl transferase [Sphingopyxis sp. Root214]) HSP 1 Score: 105.5 bits (262), Expect = 5.000e-19 Identity = 70/230 (30.43%), Postives = 110/230 (47.83%), Query Frame = 0 Query: 97 QFTRLFDAIYFPSFTFVVHVDIKSDPALIDLITEYVQGFEQASMIPSVSVSWGGVTVVERTLALMQAALERDQEWEYFVNIGQEDYPLERPEVIRNFLAHSTPPATNFIYCWDLRGHDFFGQWEHHQGRVSRVFVDLFNGKSREVDGVSRPTPKEYTFYKSLQQTALSRAFVSTAVYSPEARRLLLYLATSEAPDEIFFPTLLHLPPFSAHASRATCNGTLHFSHWIRPG 327 QF R+F+AIY P ++V+HVD S P I +++ F+ ++I S WGG ++V+ L M+ L+ ++ W +++N+ +D+PL+ IR FL + P +I D R RVS +FV+ R + R K+ T Y Q A++R+F AV+ P A R + S PDE FF TL+ ++ A N L W+ G Sbjct: 14 QFKRMFNAIYAPGNSYVIHVDKGSGPEFAADIAAFLKPFQGVAIIESKKALWGGYSLVDAELRGMKQLLKMNRSWTHYINLSGQDFPLKSQAYIRAFLRAN--PRRQYIRALDQR-----AARPDTMNRVSHMFVEALGRMFR--TRLPRAFLKDATPYIGTQWKAVTRSFCHFAVHHPSAERFKTFYRRSFIPDEAFFQTLM----MNSRAQGEVMNDDLRTIDWVPDG 230
BLAST of NO02G00650 vs. NCBI_GenBank
Match: WP_088309206.1 (glycosyl transferase [Novosphingobium sp. B 225]) HSP 1 Score: 105.5 bits (262), Expect = 5.000e-19 Identity = 69/203 (33.99%), Postives = 100/203 (49.26%), Query Frame = 0 Query: 97 QFTRLFDAIYFPSFTFVVHVDIKSDPALIDLITEYVQGFEQASMIPSVSVSWGGVTVVERTLALMQAALERDQEWEYFVNIGQEDYPLERPEVIRNFLAHSTPPATNFIYCWDLRGHDFFGQWEHHQGRVSRVFVDLFNGKSREVDGVSRPTPKEYTFYKSLQQTALSRAFVSTAVYSPEARRLLLYLATSEAPDEIFFPTLL 300 QF R+F AI+ P ++VH+D S AL I E+++ + +A ++PS WGG ++V+ L MQ L+ EW++++N+ +D+PL+ IR+FLA P T FI R D RV VF++LF R G+ R P T Y Q +SRAF P R+ + S DE FF T L Sbjct: 14 QFKRMFKAIHAPGNRYLVHIDKSSGKALAADIAEFLKSYPEAEILPSRRALWGGFSLVDAELRGMQHLLDGSTEWQHYINLSGQDFPLKSQGYIRDFLA--AHPGTQFI-----RYADQLLVRPDTMNRVQSVFLELFGKIWR--TGIRRKLPAGMTPYIGTQWKVVSRAFCEHVCSDPSVARIKRFYRRSLIADEGFFQTAL 207
BLAST of NO02G00650 vs. NCBI_GenBank
Match: WP_093019728.1 (glycosyl transferase [Sphingobium sp. YR768] >SER86473.1 Core-2/I-Branching enzyme [Sphingobium sp. YR768]) HSP 1 Score: 105.1 bits (261), Expect = 6.600e-19 Identity = 83/283 (29.33%), Postives = 125/283 (44.17%), Query Frame = 0 Query: 97 QFTRLFDAIYFPSFTFVVHVDIKSDPALIDLITEYVQGFEQASMIPSVSVSWGGVTVVERTLALMQAALERDQEWEYFVNIGQEDYPLERPEVIRNFLAHSTPPATNFIYCWDLRGHDFFGQWEHHQGRVSRVFVDLFNGKSREVDGVSRPTPKEYTFYKSLQQTALSRAFVSTAVYSPEARRLLLYLATSEAPDEIFFPTLLHLPPFSAHASRATCNGTLHFSHWIRPGG-SWHPE-YLTPIHLPLLLEKMRGGSXXXXXXXSGLPTFWARKFDVGKGSSTL 378 QF R+F AIY P +++HVD++S P +I I +++ + +M+PS + WGG ++V+ L M LE + +W YF+N+ +D+PL+ I N+LA + T FI R R+S F++ FN R GV R T Y Q A++R F A + P R + + DE FF T++ +A + N L WI G P ++T L L L P +ARKFD + S L Sbjct: 14 QFKRMFRAIYVPGNQYLIHVDLRSGPKMIADIAAFLKPYANVAMLPSRKMLWGGYSLVDAELRGMAKLLEMNADWRYFINLSGQDFPLKSQAYIANYLA--SHDGTEFI-----RAVPQQVVRPDTMNRLSHYFLEAFNRIVR--TGVRRGPMAAVTPYIGTQWKAVTRNFCDFACHDPATERFKRFYRRTLIADEGFFQTVM----MNAFSGGKIVNDDLRTIDWIPDGDIKLRPRTFVTRDALRLTLS----------------PDLFARKFDAQEDSHIL 267
BLAST of NO02G00650 vs. NCBI_GenBank
Match: WP_062177306.1 (glycosyl transferase [Sphingopyxis sp. C-1] >GAO77290.1 glycosyl transferase, putative [Sphingopyxis sp. C-1]) HSP 1 Score: 104.8 bits (260), Expect = 8.600e-19 Identity = 84/288 (29.17%), Postives = 128/288 (44.44%), Query Frame = 0 Query: 97 QFTRLFDAIYFPSFTFVVHVDIKSDPALIDLITEYVQGFEQASMIPSVSVSWGGVTVVERTLALMQAALERDQEWEYFVNIGQEDYPLERPEVIRNFLAHSTPPATNFIYCWDLRGHDFFGQWEHHQGRVSRVFVDLFNGKSREVDGVSRPTPKEYTFYKSLQQTALSRAFVSTAVYSPEARRLLLYLATSEAPDEIFFPTLLHLPPFSAHASRATCNGTLHFSHWIRPGG-SWHPE-YLTPIHLPLLLEKMRGGSXXXXXXXSGLPTFWARKFDVGKGSSTLMDTLD 383 QF R+F AIY P ++VVHVD S I +++ F+ +I S + WGG ++V+ L M+ L+ ++ W +++N+ +D+PL+ IR FL + P +I D R RVS +FV+ R + R K+ T Y Q A++R+F AV+ P A R + S PDE FF TL+ ++ A N L W+ G P ++T L L L P +ARKFD + S + D L+ Sbjct: 14 QFKRMFHAIYAPGNSYVVHVDKGSGSEFAADIAAFLKPFQGVEIIESKNALWGGYSLVDAELRGMKQLLKMNRSWTHYINLSGQDFPLKSQAYIRAFLRAN--PRRQYIRALDQR-----AARPDTMNRVSHMFVEALGRMFR--TRLPRAFLKDATPYIGTQWKAVTRSFCHFAVHHPSAERFKTFYRRSFIPDEAFFQTLM----MNSRAQGEVMNDDLRTIDWVPDGDIKLRPRTFVTSDALRLTLS----------------PDLFARKFD-AEEDSVIFDLLE 271
BLAST of NO02G00650 vs. NCBI_GenBank
Match: WP_052445697.1 (glycosyl transferase [Aeromonas encheleia]) HSP 1 Score: 104.4 bits (259), Expect = 1.100e-18 Identity = 71/226 (31.42%), Postives = 114/226 (50.44%), Query Frame = 0 Query: 77 VAYGVMVYQQQNKTVADVLGQFTRLFDAIYFPSFTFVVHVDIKSDPALIDLITEYVQGFEQASMIPSVSVSWGGVTVVERTLALMQAALERDQEWEYFVNIGQEDYPLERPEVIRNFLAHSTPPATNFIYCWDLRGH--DFFGQWEHHQGRVSRVFVDLFNGKSREVDGV-SRPTPKEYTFYKSLQQTALSRAFVSTAVYSPEARRLLLYLATSEAPDEIFFPTLL 300 +AY ++V++ GQF RLF AIY S +++HVD +S P L I +++ + A+M+PS + WGG ++V+ L + A LE+++EWE+F+N+ +D+PL I +FL +F+ D R H D + +H+ +R V + V +RP + T Y Q LSRAF +SPE R + + DE FF T++ Sbjct: 2 IAYLILVHRYP--------GQFKRLFKAIYHDSNHYLIHVDKRSGPELQQEIADFLADYPNAAMLPSKNALWGGYSLVDAELRGIAALLEQNKEWEFFINLSAQDFPLRSQHDIHDFLRDH--KGKDFLKVADQRQHRPDTLHRIDHYVTETARELV---------CEPVKTRPYLEGVTPYIGNQWMILSRAFCEFVSHSPEVDRFKAFYRHTLIADEGFFQTVI 208
BLAST of NO02G00650 vs. NCBI_GenBank
Match: WP_088184634.1 (glycosyl transferase [Sphingobium sp. Z007]) HSP 1 Score: 104.4 bits (259), Expect = 1.100e-18 Identity = 83/283 (29.33%), Postives = 126/283 (44.52%), Query Frame = 0 Query: 97 QFTRLFDAIYFPSFTFVVHVDIKSDPALIDLITEYVQGFEQASMIPSVSVSWGGVTVVERTLALMQAALERDQEWEYFVNIGQEDYPLERPEVIRNFLAHSTPPATNFIYCWDLRGHDFFGQWEHHQGRVSRVFVDLFNGKSREVDGVSRPTPKEYTFYKSLQQTALSRAFVSTAVYSPEARRLLLYLATSEAPDEIFFPTLLHLPPFSAHASRATCNGTLHFSHWIRPGG-SWHPE-YLTPIHLPLLLEKMRGGSXXXXXXXSGLPTFWARKFDVGKGSSTL 378 QF R+F AIY P +++HVD +S + I +++ + +++PS + WGG ++V+ L M LE + +W YF+N+ +D+PL+ I ++LA + T FI R R+S F++ FN R GV R T + Q A++RAF + A Y P ARR + + DE FF TL+ +A + N L WI G P ++T L L L P +ARKFD + S L Sbjct: 14 QFKRMFQAIYVPGNQYLIHVDQRSGSEMTADIAAFLKPYINVALLPSRKMLWGGYSLVDAELRGMAKLLEMNADWRYFINLSGQDFPLKSQAYIADYLA--SHDGTEFI-----RNVPQQAARPDTMNRLSHYFLEAFNRIVR--TGVRRRPMAGITPHIGTQWKAVTRAFCAFACYDPAARRFKQFYRRTLIADEGFFQTLM----MNAFSGGKVANDDLRTIDWIPDGDIKLRPRTFVTRDALRLTLS----------------PDLFARKFDAQEDSHIL 267
BLAST of NO02G00650 vs. NCBI_GenBank
Match: WP_088440084.1 (glycosyl transferase [Sphingopyxis bauzanensis] >OWQ99341.1 glycosyl transferase [Sphingopyxis bauzanensis]) HSP 1 Score: 102.8 bits (255), Expect = 3.300e-18 Identity = 85/301 (28.24%), Postives = 129/301 (42.86%), Query Frame = 0 Query: 97 QFTRLFDAIYFPSFTFVVHVDIKSDPALIDLITEYVQGFEQASMIPSVSVSWGGVTVVERTLALMQAALERDQEWEYFVNIGQEDYPLERPEVIRNFLAHSTPPATNFIYCWDLRGHDFFGQWEHHQGRVSRVFVDLFNGKSREVDGVSRPTPKEY----TFYKSLQQTALSRAFVSTAVYSPEARRLLLYLATSEAPDEIFFPTLLHLPPFSAHASRATCNGTLHFSHWIRPGGSWHPEYLTPIHLPLLLEKMRGGSXXXXXXXSGLPTFWARKFDVGKGSSTLMDTLDFQRECRHAFDY 394 QF R+F AIY P ++V+HVD S I E+V+ ++ ++I S WGG ++V+ L M L W +++N+ +D+PL+ IR+FL + P I D R RV+R++V+ VS P P+ + T + Q A++R+F AV+ P A R + S PDE FF TL+ P N L WI P L ++ G S S P +ARKFD+ + + + D L+ + A DY Sbjct: 14 QFKRMFRAIYAPGNSYVIHVDKSSGAEFAADIGEFVKPYQGVAIIESKKALWGGYSLVDAELRGMARLLAMSSSWTHYINLSGQDFPLKSEAYIRDFLRAN--PRRQLIRTLDQR-----KVRPDTMNRVNRLWVEALG------HVVSTPLPRAFLKGATPFIGTQWKAVTRSFCQFAVHHPSAERFKAFYRRSFIPDEAFFQTLMMNSPNQGE----VINDDLRTVDWI------------PYGKNALCPRVFGASDALRLTLS--PDLFARKFDMDEDAG-IFDLLEAHLKTPAAMDY 282 The following BLAST results are available for this feature:
BLAST of NO02G00650 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G00650 ID=NO02G00650|Name=NO02G00650|organism=Nannochloropsis oceanica|type=gene|length=2743bpback to top protein sequence of NO02G00650.1 >NO02G00650.1-protein ID=NO02G00650.1-protein|Name=NO02G00650.1|organism=Nannochloropsis oceanica|type=polypeptide|length=526bpback to top Synonyms
Publications
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