jgi.p|Nanoce1779_2|667671, gene_643 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|667671
Unique Namegene_643
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_2:81214..85278 +

Link to JBrowse

Properties
Property NameValue
TranscriptId667757
ProteinId667671
Product nameCore-2/I-Branching enzyme-domain containing protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_2supercontigscaffold_2:81214..85278 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008375acetylglucosaminyltransferase activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL032ncniL032Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO02G00650NO02G00650Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|667671mRNA_643-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|667671mRNA_643Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|667671

>mRNA_643-protein ID=mRNA_643-protein|Name=jgi.p|Nanoce1779_2|667671|organism=Nannochloropsis oceanica|type=polypeptide|length=859bp
MATAICGKSSQSSLNNFVASPMCASLVRMALVLLLSLAGDGQLLASSSSV
GACRADATPLPSYEDVGLIDRPSPGKVAYGVMVYQQQNKTVADVLGQFTR
LFDAIYFPSFTFVVHVDIKSDPALIDLITEYVQGFEQASMIPSVSVSWGG
VTVVERTLALMQAALERDQEWEYFVNIGQEDYPLERPEVIRNFLAHSTPP
ATNFIYCWDLRGHDFFGQWEHHQGRVSRVFVDLFNGKSREVDGVSRPTPK
EYTFYKSLQQTALSRAFVSTAVYSPEARRLLLYLATSEAPDEIFFPTLLH
LPPFSAHASRATCNGTLHFSHWIRPGGSWHPEYLTPIHLPLLLEKMRGGS
GSSSSSGSGLPTFWARKFDVGKGSSTLMDTLDFQRECRHAFDYEEEDMDW
APAIIFAKEMEGKIEVREGGREAGEEGAEDRCVYREVRSEGHLVTGKDML
AHLDKARRSHDAEAIMRFIVSVEREMSAHTDHYAHPQWQEQRRRLQQHRE
EAERQLLPGTRLLGAAGNEGRQTAIMKGEGLHAVAPAFSGSPYRNAKYTK
PSRGSITFLRDRILQVLFLVLGICYVGLIIYYRSMLAQDEASQQALSSTL
TTLQDRHSEQMARQKAKLTEAQMALKTKEDALVKAERQLQAMDSVVEHLE
KNQLVQALRKQNLFFNHLRWGKGPTRVVLEMRAVKGDDERAVEEVELEMA
PFDVMPHVIHWFLTMVETGYWDGCHLIRNARHVLQFNCHARTAVTGNDRL
LARVPGAGVADGKIGGFQSIVFQEFSPDFNHLPFTLGVAGRPGGEDFYVN
LVENTISHGPGGQGPEPDPCFAKVVRGREVLEGWHGRLGNEFLDPKEYVL
VKRMYIKG*
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Synonyms
Publications