NO01G05690, NO01G05690 (gene) Nannochloropsis oceanica

Overview
NameNO01G05690
Unique NameNO01G05690
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3870
Alignment locationchr1:1587238..1591107 -

Link to JBrowse

Properties
Property NameValue
DescriptionChorismate Synthase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:1587238..1591107 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0009073aromatic amino acid family biosynthetic process
GO:0009987cellular process
GO:0009058biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0004107chorismate synthase activity
GO:0003824catalytic activity
Vocabulary: INTERPRO
TermDefinition
IPR035904Chorismate_synth_AroC_sf
IPR000453Chorismate_synth
Homology
BLAST of NO01G05690 vs. NCBI_GenBank
Match: CBN80098.1 (Chorismate Synthase [Ectocarpus siliculosus])

HSP 1 Score: 593.6 bits (1529), Expect = 5.500e-166
Identity = 298/384 (77.60%), Postives = 339/384 (88.28%), Query Frame = 0
Query:   92 GNSFGRLFRISTFGESHGGGVGVVVDGCPPRVEITREEIQQELDRRRPGQSRLTTPRNEADSVEILSGVSVDGLTLGTPIGMLVRNQDHRSNDYDTNSVAYRPSHADATYDAKYGLRAIAGGGRSSARETIGRVAAAAVAKKVLSMWSGIEIMGYVKKVQEI-EATVDPETVTMAAVEANIARCPDEETAQKMIARIDEIRKTGNSVGGVVECIARNVPAGLGSPVFDKLEAELAKACMSLPASKGFEVGSGFEGTLLTGKTHNDEFYVDEHGRTRTRTNRSGGIQGGISNGETIIIRVCFKPTSTIGQEQATVTRAGEETTMRGKGRHDPCVLPRAVPMVEAMMALVLVDALMSQEAQCNLFPRVEGAGEGMHINPLGKKVEG 475
            GNSFGRLFRIST+GESHGGGVGV +DGCPP++ +T ++IQ ELDRR+PGQSR+TTPRNE D VEILSG+S +GLTLGTPI MLVRN+D RS DYDT S+AYRPSHADATYDAKYG+RA+AGGGRSSARETIGRVAAAAVA+K+LS++SG E++GYVK VQ++    VD ET T   VEANI RCPDEE A++MI RID+IR+TG+S+GGVVEC+ARNVP+GLGSPVFDKLEAELAKACMSLPASKGFE+GSGF GTLL+GKTHNDEFYVDE G+TRTRTNRSGG+QGGISNGETI++RV FKPTSTIGQ Q TVTR GEETTMRGKGRHDPCVLPRA PMVEAM+ALVL D LM Q+AQC LFP    A E +  NPLGKK+ G
Sbjct:   45 GNSFGRLFRISTWGESHGGGVGVNLDGCPPKIPLTAQDIQVELDRRKPGQSRITTPRNEDDQVEILSGLSPEGLTLGTPIAMLVRNKDQRSQDYDTMSMAYRPSHADATYDAKYGIRAVAGGGRSSARETIGRVAAAAVARKLLSLYSGCEVLGYVKAVQDVGTEDVDLETFTREQVEANIVRCPDEEAAERMIERIDKIRRTGDSIGGVVECVARNVPSGLGSPVFDKLEAELAKACMSLPASKGFEIGSGFAGTLLSGKTHNDEFYVDEEGQTRTRTNRSGGVQGGISNGETIVVRVAFKPTSTIGQLQNTVTRGGEETTMRGKGRHDPCVLPRAAPMVEAMVALVLADVLMQQKAQCELFP--ADALETLETNPLGKKLSG 426          
BLAST of NO01G05690 vs. NCBI_GenBank
Match: XP_002286576.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED96217.1 predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 567.4 bits (1461), Expect = 4.200e-158
Identity = 289/385 (75.06%), Postives = 332/385 (86.23%), Query Frame = 0
Query:   89 MGMGNSFGRLFRISTFGESHGGGVGVVVDGCPPRVEITREEIQQELDRRRPGQSRLTTPRNEADSVEILSGVSVDGLTLGTPIGMLVRNQDHRSNDYDTN--SVAYRPSHADATYDAKYGLRAIAGGGRSSARETIGRVAAAAVAKKVLSMWSGIEIMGYVKKVQEIEAT-VDPETVTMAAVEANIARCPDEETAQKMIARIDEIRKTGNSVGGVVECIARNVPAGLGSPVFDKLEAELAKACMSLPASKGFEVGSGFEGTLLTGKTHNDEFYVDEH-GRTRTRTNRSGGIQGGISNGETIIIRVCFKPTSTIGQEQATVTRAGEETTMRGKGRHDPCVLPRAVPMVEAMMALVLVDALMSQEAQCNLFPRVEGAGEGMHINPLG 470
            MG GNSFGRLFRIST+GESHGGGVGV +DGCPPR+ ITREEIQ +LDRRRPGQSR+TTPRNEAD+VEILSG++ + +TLGTPIGMLVRN+D RS DY  N  SVAYRPSHADATYDAKYG+RAIAGGGRSSARETIGRVAA AVA+K+L M++GIE++ YV KVQ+IEAT V+ +T TM  V+ANI RCPDE +A++M+ RIDEIRK+GNS+GGVV C+ARNVPAGLG+PVFDKLEA+LAKACMS+PA+KGFE G GF GTLLTGK HNDEFY+DE  G TRTRTNRSGGIQGGISNGE +++ V FKPTSTI Q Q TVTR G+E  +RGKGRHDPCVLPRAVPMVEAM+AL LVDAL+ Q+AQC LFP     GE    NP+G
Sbjct:   25 MGTGNSFGRLFRISTWGESHGGGVGVTLDGCPPRIPITREEIQIDLDRRRPGQSRITTPRNEADAVEILSGLNPEDITLGTPIGMLVRNKDQRSGDYLENDMSVAYRPSHADATYDAKYGVRAIAGGGRSSARETIGRVAAGAVARKILRMYNGIEVLAYVSKVQDIEATNVNHDTFTMEEVDANIVRCPDEASAERMLERIDEIRKSGNSIGGVVTCVARNVPAGLGAPVFDKLEADLAKACMSIPAAKGFESGDGFGGTLLTGKDHNDEFYIDEETGATRTRTNRSGGIQGGISNGENVVVHVAFKPTSTIAQSQKTVTRDGQEVELRGKGRHDPCVLPRAVPMVEAMVALTLVDALLCQKAQCELFPNEAPMGE--QPNPMG 407          
BLAST of NO01G05690 vs. NCBI_GenBank
Match: XP_002177933.1 (chorismate synthase [Phaeodactylum tricornutum CCAP 1055/1] >EEC50747.1 chorismate synthase [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 565.1 bits (1455), Expect = 2.100e-157
Identity = 286/385 (74.29%), Postives = 332/385 (86.23%), Query Frame = 0
Query:   89 MGMGNSFGRLFRISTFGESHGGGVGVVVDGCPPRVEITREEIQQELDRRRPGQSRLTTPRNEADSVEILSGVSVDGLTLGTPIGMLVRNQDHRSNDYDTN--SVAYRPSHADATYDAKYGLRAIAGGGRSSARETIGRVAAAAVAKKVLSMWSGIEIMGYVKKVQEIEATVDPETVTMAAVEANIARCPDEETAQKMIARIDEIRKTGNSVGGVVECIARNVPAGLGSPVFDKLEAELAKACMSLPASKGFEVGSGFEGTLLTGKTHNDEFYVD-EHGRTRTRTNRSGGIQGGISNGETIIIRVCFKPTSTIGQEQATVTRAGEETTMRGKGRHDPCVLPRAVPMVEAMMALVLVDALMSQEAQCNLFPRVEGAGEGMHINPLGK 471
            MG GNSFGR+FRIST+GESHGGGVGVV+DGCPPR+ ++REEIQ +LDRRRPGQSR+TTPRNEAD+VEI+SG+S DGLTLGTPI MLVRN+D RS DY  N   VAYRPSHADATYDAKYG+RA+AGGGRSSARETIGRVAA A+A+K+L  ++GIEI+ YV KVQ+I  +VD +T TM  V+AN+ RCPD+  A+ M+ARID+IRK+GNS+GGVV C+ARNVPAGLG+PVFDKLEA+LAKAC+S+PA+KGFE G GF GTLLTGK HNDEFYVD E G TRT+TNRSGGIQGGISNGE I+I V FKPTSTIGQ Q+TVTR G+E  +RGKGRHDPCVLPRAVPMVEAM+AL LVD LM Q+AQC LFP  E A E +  NP+GK
Sbjct:   24 MGTGNSFGRVFRISTWGESHGGGVGVVLDGCPPRIPVSREEIQMDLDRRRPGQSRITTPRNEADAVEIISGLSPDGLTLGTPIAMLVRNKDQRSQDYLDNDMKVAYRPSHADATYDAKYGVRAVAGGGRSSARETIGRVAAGAIARKLLHKYNGIEILAYVSKVQDIGCSVDDDTFTMEDVDANMVRCPDQAAAETMLARIDDIRKSGNSIGGVVTCVARNVPAGLGAPVFDKLEADLAKACLSIPAAKGFESGDGFAGTLLTGKDHNDEFYVDPETGATRTKTNRSGGIQGGISNGENIVIHVAFKPTSTIGQAQSTVTRDGQEVELRGKGRHDPCVLPRAVPMVEAMVALTLVDHLMMQQAQCELFPN-EAAAEDLP-NPMGK 406          
BLAST of NO01G05690 vs. NCBI_GenBank
Match: OEU09408.1 (chorismate synthase [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 561.6 bits (1446), Expect = 2.300e-156
Identity = 286/390 (73.33%), Postives = 331/390 (84.87%), Query Frame = 0
Query:   89 MGMGNSFGRLFRISTFGESHGGGVGVVVDGCPPRVEITREEIQQELDRRRPGQSRLTTPRNEADSVEILSGVSVDGLTLGTPIGMLVRNQDHRSNDYDTN--SVAYRPSHADATYDAKYGLRAIAGGGRSSARETIGRVAAAAVAKKVLSMWSGIEIMGYVKKVQEI-EATVDPETVTMAAVEANIARCPDEETAQKMIARIDEIRKTGNSVGGVVECIARNVPAGLGSPVFDKLEAELAKACMSLPASKGFEVGSGFEGTLLTGKTHNDEFYVD-EHGRTRTRTNRSGGIQGGISNGETIIIRVCFKPTSTIGQEQATVTRAGEETTMRGKGRHDPCVLPRAVPMVEAMMALVLVDALMSQEAQCNLFPRVEGAGEGMHINPLGKKVEG 475
            MG GNSFGR FRIST+GESHGGGVGV +DGCPPR+EITRE+IQ++LDRRRPGQSR+TTPR+EADSVEI+SG++ + +TLGTPI MLVRN+D RS DY  N  +VAYRPSHADATYDAKYG+RAIAGGGRSSARETIGRVAA AVA+K+L+M++GIE++ YV KVQEI    VD +T TM  V++NI RCPD + A+KM+ARIDEIRK GNS+GGVV C+ARNVPAGLGSPVFDKLEA+LAKACMS+PA+KGFE G GF GTLL+GK HNDEFY+D E G TRT+TNRSGGIQGGISNGE I+I V FK TSTIGQ+QATVTR G E  +RGKGRHDPCVLPRA+PMVEAM+AL LVDALM Q+AQC LFP        M  NP+G   +G
Sbjct:    3 MGTGNSFGRTFRISTWGESHGGGVGVTLDGCPPRIEITREDIQKDLDRRRPGQSRITTPRDEADSVEIMSGLNPENVTLGTPIAMLVRNKDQRSQDYLENDMNVAYRPSHADATYDAKYGVRAIAGGGRSSARETIGRVAAGAVARKILTMYNGIEVLAYVSKVQEIGTENVDHDTFTMEEVDSNIVRCPDPDAAEKMLARIDEIRKAGNSIGGVVTCVARNVPAGLGSPVFDKLEADLAKACMSIPAAKGFESGDGFAGTLLSGKDHNDEFYIDPETGATRTKTNRSGGIQGGISNGENIVIHVAFKSTSTIGQKQATVTREGNEVELRGKGRHDPCVLPRAIPMVEAMVALTLVDALMMQKAQCELFPN----DSQMQPNPMGSTEKG 388          
BLAST of NO01G05690 vs. NCBI_GenBank
Match: GAX25432.1 (chorismate synthase [Fistulifera solaris])

HSP 1 Score: 554.3 bits (1427), Expect = 3.700e-154
Identity = 285/386 (73.83%), Postives = 329/386 (85.23%), Query Frame = 0
Query:   89 MGMGNSFGRLFRISTFGESHGGGVGVVVDGCPPRVEITREEIQQELDRRRPGQSRLTTPRNEADSVEILSGVSVDGLTLGTPIGMLVRNQDHRSNDYDTN--SVAYRPSHADATYDAKYGLRAIAGGGRSSARETIGRVAAAAVAKKVLSMWSGIEIMGYVKKVQEIEA-TVDPETVTMAAVEANIARCPDEETAQKMIARIDEIRKTGNSVGGVVECIARNVPAGLGSPVFDKLEAELAKACMSLPASKGFEVGSGFEGTLLTGKTHNDEFYVD-EHGRTRTRTNRSGGIQGGISNGETIIIRVCFKPTSTIGQEQATVTRAGEETTMRGKGRHDPCVLPRAVPMVEAMMALVLVDALMSQEAQCNLFPRVEGAGEGMHINPLGK 471
            MG GN+FGR+FRIST+GESHGGGVGV +DGCPPR+ +TREEIQ +LDRRRPGQSR+TTPRNE D+VEI+SG+S DGLTLGTPI MLVRN+D RS DY  N   VAYRPSHADATYDAKYG+RA+AGGGRSSARETIGRVAA AVA+K+L M++GIE++ YV  VQ+I+A  VD ET TM  V+ANI RCPD  +A+KM+ARIDEIRK GNS+GGVV C+ARNVPAGLG+PVFDKLEA+LAKACMS+PA+KGFE G GF GTLL+GK HNDEFY+D E G TRT+TNRSGGIQGGISNGE+I++ V FKPTSTIGQ Q TVTR G E  +RGKGRHDPCVLPRAVPMVEAM+AL L+D +M Q+AQC LFP  E A E    NP+GK
Sbjct:   22 MGTGNTFGRVFRISTWGESHGGGVGVQLDGCPPRIPLTREEIQMDLDRRRPGQSRITTPRNEEDAVEIISGLSPDGLTLGTPIAMLVRNKDQRSQDYLDNDMKVAYRPSHADATYDAKYGVRAVAGGGRSSARETIGRVAAGAVARKLLKMYNGIEVLAYVSAVQDIKAENVDDETFTMEDVDANIVRCPDTVSAEKMLARIDEIRKAGNSIGGVVTCVARNVPAGLGAPVFDKLEADLAKACMSIPAAKGFESGDGFAGTLLSGKDHNDEFYIDPETGATRTKTNRSGGIQGGISNGESIVVHVAFKPTSTIGQVQKTVTRDGTEVELRGKGRHDPCVLPRAVPMVEAMVALTLMDHIMMQKAQCELFPN-ETALED-RPNPMGK 405          
BLAST of NO01G05690 vs. NCBI_GenBank
Match: GAX20952.1 (chorismate synthase [Fistulifera solaris])

HSP 1 Score: 553.9 bits (1426), Expect = 4.800e-154
Identity = 285/386 (73.83%), Postives = 330/386 (85.49%), Query Frame = 0
Query:   89 MGMGNSFGRLFRISTFGESHGGGVGVVVDGCPPRVEITREEIQQELDRRRPGQSRLTTPRNEADSVEILSGVSVDGLTLGTPIGMLVRNQDHRSNDYDTN--SVAYRPSHADATYDAKYGLRAIAGGGRSSARETIGRVAAAAVAKKVLSMWSGIEIMGYVKKVQEIEA-TVDPETVTMAAVEANIARCPDEETAQKMIARIDEIRKTGNSVGGVVECIARNVPAGLGSPVFDKLEAELAKACMSLPASKGFEVGSGFEGTLLTGKTHNDEFYVD-EHGRTRTRTNRSGGIQGGISNGETIIIRVCFKPTSTIGQEQATVTRAGEETTMRGKGRHDPCVLPRAVPMVEAMMALVLVDALMSQEAQCNLFPRVEGAGEGMHINPLGK 471
            MG GN+FGR+FRIST+GESHGGGVGV +DGCPPR+ +TREEIQ +LDRRRPGQSR+TTPRNE D+VEI+SG+S DGLTLGTPI MLVRN+D RS DY  N   VAYRPSHADATYDAKYG+RA+AGGGRSSARETIGRVAA AVA+K+L M++GIE++ YV  VQ+I+A +VD ET TM  V+ANI RCPD  +A+KM+ARIDEIRK GNS+GGVV C+ARNVPAGLG+PVFDKLEA+LAKACMS+PA+KGFE G GF GTLL+GK HNDEFY+D E G TRT+TNRSGGIQGGISNGE+I++ V FKPTSTIGQ Q TVTR G E  +RGKGRHDPCVLPRAVPMVEAM+AL L+D +M Q+AQC LFP  E A E    NP+GK
Sbjct:   23 MGTGNTFGRVFRISTWGESHGGGVGVQLDGCPPRIPLTREEIQIDLDRRRPGQSRITTPRNEEDAVEIISGLSPDGLTLGTPIAMLVRNKDQRSQDYLDNDMKVAYRPSHADATYDAKYGVRAVAGGGRSSARETIGRVAAGAVARKLLKMYNGIEVLAYVSSVQDIKAESVDDETFTMEDVDANIVRCPDPVSAEKMLARIDEIRKAGNSIGGVVTCVARNVPAGLGAPVFDKLEADLAKACMSIPAAKGFESGDGFAGTLLSGKDHNDEFYIDPETGATRTKTNRSGGIQGGISNGESIVVHVAFKPTSTIGQVQKTVTRDGTEVELRGKGRHDPCVLPRAVPMVEAMVALTLMDHIMMQKAQCELFPN-ETALED-RPNPMGK 406          
BLAST of NO01G05690 vs. NCBI_GenBank
Match: XP_005712287.1 (Chorismate synthase [Chondrus crispus] >CDF77413.1 Chorismate synthase [Chondrus crispus])

HSP 1 Score: 551.6 bits (1420), Expect = 2.400e-153
Identity = 279/385 (72.47%), Postives = 327/385 (84.94%), Query Frame = 0
Query:   88 QMGMGNSFGRLFRISTFGESHGGGVGVVVDGCPPRVEITREEIQQELDRRRPGQSRLTTPRNEADSVEILSGVSVDGLTLGTPIGMLVRNQDHRSNDYDTNSVAYRPSHADATYDAKYGLRAIAGGGRSSARETIGRVAAAAVAKKVLSMWSGIEIMGYVKKVQEIEAT-VDPETVTMAAVEANIARCPDEETAQKMIARIDEIRKTGNSVGGVVECIARNVPAGLGSPVFDKLEAELAKACMSLPASKGFEVGSGFEGTLLTGKTHNDEFYVDEHGRTRTRTNRSGGIQGGISNGETIIIRVCFKPTSTIGQEQATVTRAGEETTMRGKGRHDPCVLPRAVPMVEAMMALVLVDALMSQEAQCNLFPRVEGAGEGMHINPLGKK 472
            +MG+GN+FGR+ RIST+GESHGGGVGV VDG PPR+ ++REE+Q +LDRRRPGQSR+ TPRNE D+VEILSGV VDG+ +GTPI MLVRN+DHRS DY+T +VAYRPSHADA YDAKYG+RA+AGGGRSSARETIGRVAA A+AKK+L  ++ +E++ YVK V++IEA  VDP  VT   VEANI RCP EETA+KMIA +D IRKTGNSVGGVVE +ARNVPAGLGSPVFDKLEA+LAKACMSLPASKGFE+GSGFEGT+LTG  HND FYVD+ GRTRT +NRSGG+QGGISNGE I+ RV FK TSTIG++Q TVTRAGEET +RGKGRHDPCVLPRAVPMVE+M+AL L D L+ Q AQC++ P  + +      NPLG K
Sbjct:   35 RMGLGNTFGRILRISTWGESHGGGVGVTVDGVPPRLALSREEVQLDLDRRRPGQSRIVTPRNEPDAVEILSGV-VDGVCIGTPIAMLVRNKDHRSQDYNTMAVAYRPSHADAAYDAKYGIRAVAGGGRSSARETIGRVAAGAIAKKILREYAAVEVIAYVKSVRDIEAPHVDPHAVTQEQVEANIIRCPHEETAEKMIAYVDSIRKTGNSVGGVVEVVARNVPAGLGSPVFDKLEADLAKACMSLPASKGFEIGSGFEGTMLTGLEHNDAFYVDDDGRTRTASNRSGGVQGGISNGEAIVCRVAFKATSTIGKKQKTVTRAGEETELRGKGRHDPCVLPRAVPMVESMVALTLADHLLQQIAQCSVMPVEKESAP----NPLGPK 414          
BLAST of NO01G05690 vs. NCBI_GenBank
Match: XP_009037872.1 (hypothetical protein AURANDRAFT_28035 [Aureococcus anophagefferens] >EGB07237.1 hypothetical protein AURANDRAFT_28035 [Aureococcus anophagefferens])

HSP 1 Score: 545.8 bits (1405), Expect = 1.300e-151
Identity = 283/385 (73.51%), Postives = 323/385 (83.90%), Query Frame = 0
Query:   91 MGNSFGRLFRISTFGESHGGGVGVVVDGCPPRVEITREEIQQELDRRRPGQSRLTTPRNEADSVEILSGVSVD-GLTLGTPIGMLVRNQDHRSNDYDTN-SVAYRPSHADATYDAKYGLRAIAGGGRSSARETIGRVAAAAVAKKVLSMWSGIEIMGYVKKVQEI--EATVDPETVTMAAVEANIARCPDEETAQKMIARIDEIRKTGNSVGGVVECIARNVPAGLGSPVFDKLEAELAKACMSLPASKGFEVGSGFEGTLLTGKTHNDEFYVDEHGRTRTRTNRSGGIQGGISNGETIIIRVCFKPTSTIGQEQATVTRAGEETTMRGKGRHDPCVLPRAVPMVEAMMALVLVDALMSQEAQCNLFPRVEGAGEGMHINPLGKK 472
            MGNSFGRLFRIST+GESHGGGVGVVVDGCPPRV ++   IQ ELDRRRPGQSRLTTPRNE+D VEILSGV  + G+TLGTPI MLVRN+D RS DY    + AYRPSHADATYDAKYG+RA+AGGGRSSARETIGRVA  AVA++VL +++G+E++GYV KVQ++      D + VT+  VEA++ RCP  E+A++MIARIDEIR+ GNS+GGVV C+A+NVPAGLGSPVFDKLEAELAKACMSLPASKGFEVGSGF+GTLL GK HNDEFYVD  GRTRTR+NRSGGIQGGISNGETI++RV FKPTSTIGQ QATVTR GEE  +RGKGRHDPCVLPRA PMVE+M+AL L+DALM Q+AQC L       G     NPLG K
Sbjct:    1 MGNSFGRLFRISTWGESHGGGVGVVVDGCPPRVPLSEVPIQFELDRRRPGQSRLTTPRNESDQVEILSGVDKESGVTLGTPIAMLVRNKDQRSQDYKGGMTQAYRPSHADATYDAKYGVRAVAGGGRSSARETIGRVAGGAVAREVLRLYAGVEVVGYVSKVQDVGMPDDFDVDAVTIDDVEASMVRCPHPESAERMIARIDEIRRKGNSIGGVVTCVAQNVPAGLGSPVFDKLEAELAKACMSLPASKGFEVGSGFDGTLLAGKDHNDEFYVDADGRTRTRSNRSGGIQGGISNGETIVVRVAFKPTSTIGQLQATVTRDGEEVELRGKGRHDPCVLPRAAPMVESMVALTLMDALMQQKAQCELLDFEADGG----FNPLGSK 381          
BLAST of NO01G05690 vs. NCBI_GenBank
Match: XP_005535579.1 (chorismate synthase [Cyanidioschyzon merolae strain 10D] >BAM79293.1 chorismate synthase [Cyanidioschyzon merolae strain 10D])

HSP 1 Score: 545.4 bits (1404), Expect = 1.700e-151
Identity = 274/367 (74.66%), Postives = 314/367 (85.56%), Query Frame = 0
Query:   89 MGMGNSFGRLFRISTFGESHGGGVGVVVDGCPPRVEITREEIQQELDRRRPGQSRLTTPRNEADSVEILSGVSVDGLTLGTPIGMLVRNQDHRSNDYDTNSVAYRPSHADATYDAKYGLRAIAGGGRSSARETIGRVAAAAVAKKVLSMWSGIEIMGYVKKVQEIE-ATVDPETVTMAAVEANIARCPDEETAQKMIARIDEIRKTGNSVGGVVECIARNVPAGLGSPVFDKLEAELAKACMSLPASKGFEVGSGFEGTLLTGKTHNDEFYVDEHGRTRTRTNRSGGIQGGISNGETIIIRVCFKPTSTIGQEQATVTRAGEETTMRGKGRHDPCVLPRAVPMVEAMMALVLVDALMSQEAQCNLFP 455
            MG+GNSFGR+FRI+TFGESHGGGVGVV+DGCPPR+ +T E++Q EL+RRRPGQSRLTTPRNEAD  EILSGV VDG+T+GTPI ++VRN D RS DY+   V+YRPSHADATYDAKYG+RA+AGGGRSSARETIGRVAA A+AKK+L  ++G +I+ YVK V+ IE A +DP  V+   +E+NI RCPD E A +MI  IDEIR+TGNSVGGVVEC+ARNVPAGLGSPVFDKLEAELAKA MSLPASKGFEVGSGF GTLLTG  HND FY+D +GRTR R NRSGGIQGGISNGE I+ RV FKPTSTI +EQ TVTRAGE+  +R KGRHDPCVLPRAVPMVEAM+ALVLVD L+ Q AQC+L P
Sbjct:   45 MGLGNSFGRIFRITTFGESHGGGVGVVIDGCPPRLPLTIEDVQIELNRRRPGQSRLTTPRNEADEAEILSGV-VDGVTMGTPIAIVVRNTDQRSQDYEAMKVSYRPSHADATYDAKYGIRAVAGGGRSSARETIGRVAAGAIAKKILRTYAGTQILAYVKSVKHIEAANIDPNVVSYEQIESNIVRCPDSEAASQMIQLIDEIRRTGNSVGGVVECVARNVPAGLGSPVFDKLEAELAKALMSLPASKGFEVGSGFGGTLLTGVEHNDPFYIDSNGRTRARENRSGGIQGGISNGENIVCRVAFKPTSTISREQNTVTRAGEQVVLRAKGRHDPCVLPRAVPMVEAMVALVLVDHLLQQIAQCSLLP 410          
BLAST of NO01G05690 vs. NCBI_GenBank
Match: OSX80683.1 (hypothetical protein BU14_0033s0027 [Porphyra umbilicalis])

HSP 1 Score: 538.9 bits (1387), Expect = 1.600e-149
Identity = 280/380 (73.68%), Postives = 321/380 (84.47%), Query Frame = 0
Query:   91 MGNSFGRLFRISTFGESHGGGVGVVVDGCPPRVEITREEIQQELDRRRPGQSRLTTPRNEADSVEILSGVSVDGLTLGTPIGMLVRNQDHRSNDYDTNSVAYRPSHADATYDAKYGLRAIAGGGRSSARETIGRVAAAAVAKKVLSMWSGIEIMGYVKKVQEIEAT-VDPETVTMAAVEANIARCPDEETAQKMIARIDEIRKTGNSVGGVVECIARNVPAGLGSPVFDKLEAELAKACMSLPASKGFEVGSGFEGTLLTGKTHNDEFYVDEHGRTRTRTNRSGGIQGGISNGETIIIRVCFKPTSTIGQEQATVTRAGEETTMRGKGRHDPCVLPRAVPMVEAMMALVLVDALMSQEAQCNLFPRVEGAGEGMHINPLG 470
            MGN+FGRLFRIST+GESHGGGVGV +DG PP + +  E+IQ EL RRRPGQSR+ TPRNEAD+ EILSGV VDGLT+GTP+ +LVRN+DHRS DYDTN+VAYRPSHADATYDAKYG RA+AGGGRSSARETIGRVA  AVAKK+L+ ++G+EI+GYV++V ++E T VD  TV  A VEAN+ RCP   TA++MI  +D IR+TGNSVGGVVE +ARNVPAGLGSPVFDKLEA+LAKACMSLPASKGFEVGSGF+GT LTG  HND F +D  GRTR  +NRSGGIQGGI+NGETI++RV FKPTSTIG+ Q TVTR G ET +RGKGRHDPCVLPRAVPMVEAM+ALVL DALM+Q AQC L PR  G G G   NPLG
Sbjct:    1 MGNTFGRLFRISTWGESHGGGVGVTIDGVPPHLPLAVEDIQAELARRRPGQSRIVTPRNEADAAEILSGV-VDGLTVGTPVAVLVRNKDHRSGDYDTNAVAYRPSHADATYDAKYGTRAVAGGGRSSARETIGRVAGGAVAKKMLAAYAGVEIVGYVQRVLDVELTDVDHATVAEADVEANMIRCPHPPTAERMIDLVDGIRRTGNSVGGVVEVVARNVPAGLGSPVFDKLEADLAKACMSLPASKGFEVGSGFDGTRLTGFDHNDPFRLDADGRTRAASNRSGGIQGGIANGETIVLRVAFKPTSTIGRVQQTVTRGGVETELRGKGRHDPCVLPRAVPMVEAMVALVLADALMAQVAQCELLPRPPG-GVGAP-NPLG 377          
The following BLAST results are available for this feature:
BLAST of NO01G05690 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
CBN80098.15.500e-16677.60Chorismate Synthase [Ectocarpus siliculosus][more]
XP_002286576.14.200e-15875.06predicted protein [Thalassiosira pseudonana CCMP13... [more]
XP_002177933.12.100e-15774.29chorismate synthase [Phaeodactylum tricornutum CCA... [more]
OEU09408.12.300e-15673.33chorismate synthase [Fragilariopsis cylindrus CCMP... [more]
GAX25432.13.700e-15473.83chorismate synthase [Fistulifera solaris][more]
GAX20952.14.800e-15473.83chorismate synthase [Fistulifera solaris][more]
XP_005712287.12.400e-15372.47Chorismate synthase [Chondrus crispus] >CDF77413.1... [more]
XP_009037872.11.300e-15173.51hypothetical protein AURANDRAFT_28035 [Aureococcus... [more]
XP_005535579.11.700e-15174.66chorismate synthase [Cyanidioschyzon merolae strai... [more]
OSX80683.11.600e-14973.68hypothetical protein BU14_0033s0027 [Porphyra umbi... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL001nonsL001Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR047ncniR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR059ngnoR059Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G05690.4NO01G05690.4-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO01G05690.3NO01G05690.3-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO01G05690.2NO01G05690.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO01G05690.1NO01G05690.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|577897gene_601Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G05690.4NO01G05690.4Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO01G05690.3NO01G05690.3Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO01G05690.2NO01G05690.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO01G05690.1NO01G05690.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G05690 ID=NO01G05690|Name=NO01G05690|organism=Nannochloropsis oceanica|type=gene|length=3870bp
CAATAGGAGCAGCAGTAGGAGCAGCCATGGCCGCGACCACGACAATGATG
TCGACGGCCAAGAGGAGGGTGACCATGAGgtgcgtaaggttgaggaggga
gggggagggaggctgggcgctttgcgatgctggaggtggaggggaaggag
agcggtttccttctcatcgcttggaataagatgttactgcttgatttcag
acagagtcgcacatgccaccctccccgcttcccctgtcagAAGAGGTCTT
CCCGTCGTGGTCGCCACTTCCGCCTCGGTCTGTTCCTTCCTCATGCTCTG
CTTGCTCGGCACGGGTGACGCCTTTTCCATTCCCTTTTTGGCCTCCCCTT
GGCAGGTACCGTCGTGCTTATGTGAGCAGgtgggagaagaccctctcctc
tcctctctccctcacctttctcctgaccatcctccctcactttcattcga
ttttaccagGCAGGCACATCAGCAGCAGCAGCAGCAGCAGCAACAGCAAC
AGCAAGCCGCGTCAGAAGAGGTGGCGTCCAGATGGGCATGGGCAACTCTT
TCGGACGAGTAAGGGAAAAAACAGAAAAAGAAAAGAGAAGACAAGAACGA
CGAGACGTAAAACAAAAAAGGGATCCAGGCGAGAATGCTCAACCTCCTCC
CTCCCTCCCTCCCTACCTCCTTTCCCCTCCTCCCCGTTCCCTTGCCGCAG
CTCTTTCGCATCTCCACATTCGGCGAGTCCCATGGCGGGGGCGTGGGTGT
GGTGGTGGACGGCTGCCCCCCTCGCGTCGAGATCACCCGGGAAGAGATCC
AGCAGGAGCTTGACCGACGGAGgttagtacaccccccccctcctgccctc
cctcccccctcccttcctcctttccccgtccggcgcttcctgtctttgag
cgcccttattcgtctgtcgtgttgcaacaacaaaaagagaccgaccgcca
acccacttccccacccaccctccctcccgccctccctccctccctccctc
cctcctccctccctccctccctccctccctccctccagGCCGGGCCAGTC
GCGTCTCACCACCCCCCGGAACGAAGCCGACAGCGTCGAGATCCTCTCAG
GGGTATCCGTCGACGGCCTCACCCTCGGCACGCCCATTGGCATGCTCGTC
CGGAACCAGGACCACCGGTCGAATgtagggagggagggagtgagggaggg
gaggggggagaggttgggaaggagcggatgctgggcatgtcagcctcttt
gttctgacttcttcacctgtccttccctccctccccccctcccccctccc
tccctccctccctccctccccccagGACTACGACACCAATAGCGTGGCCT
ACCGCCCCTCCCACGCAGACGCCACCTACGACGCCAAGTACGGCCTGAGG
GCCATAGCGGGAGGAGGCAGGAGCAGCGCCCGGGAGACAATTGgtaggga
gggagggagggagggagggggggagggagggagggaaggcttcggtggtg
gtgctgcgcggagggggggagggcggtgtcggggaaatgacttgcatgta
tatttcatttcctccctctctccctccctcatttttctgtatcgggctga
ctggcagctaatttttccttgctcttttccccttcccccgcccctcgtcc
ttctccagGCCGAGTGGCGGCCGCGGCGGTGGCGAAGAAGGTTCTATCCA
TGTGGAGCGGCATCGAGATCATGGGCTACGTCAAGAAGgtgagggaggga
gggagagagggagggacgaagggtggacggggcagcatccccatctgcta
aaaaatgcttacagctggggagggagggaggaaatgaaatggatatgcaa
gttatttcccttaccctccccccttttctgttacctacctacctacctac
ctacctacctccctccctacctccctccctccctccctccctccctcctc
agGTGCAAGAGATCGAGGCGACCGTGGACCCTGAGACCGTTACAATGGCG
GCCGTTGAGGCCAATATTGCCCGATGCCCCGATGAAGAAACGGCCCAGAA
GATGATCGCTAGGATCGACGAAATCCGCAAGACGGGAAATAGCGTAGGAG
gtagggaggggggggggggagggagggagggagggaggggggcaaggcgt
ggaatgccagcggtgccacagccctggtggcggtggacaccccgatccga
tccgttaaagagggcgttgcttcgatgatgggcagagggttcattggtgc
gatgattgtgtctgtgagcgggtgggaggtggggaaatattattatctat
ataaagcgtagtagggattggtcggccacaactccctccctccctccctc
cctcccaccctcccttcctctctgccccgccgccagccactccacccctt
gggtatacacacccatccgcccctccctccctccctccctccctccctcc
ctccctccctccctcccttcctccctcccttcctccctccctccctccct
tcctccctccctccctcagGCGTGGTGGAGTGCATTGCCCGCAACGTGCC
TGCCGGCCTGGGCTCTCCCGTCTTCGACAAGCTCGAGGCCGAGCTCGCCA
AGGCCTGCATGTCCCTTCCCGCCTCCAAAGgtaagcatgcccgccctccc
tccctccctccctccctccctcccttcctccctcgtcttccgactgcatg
cataccgcccctccctccctccctccacgctcaccgccctccctccctcc
ccaccccctccctcccttcccagGCTTTGAGGTGGGCAGCGGCTTCGAGG
GCACTCTCTTAACGGGCAAGACGCACAACGACGAGTTCTATGTGGATGAG
CACGgtagggagggagggagggtaggaaggggggaaggagggggggaggg
aggaagggaatggagatcgtaaaaaattgagacttcgcagcttattcttt
cttccgcccgcccgtcctccctccctccctcccttagGCCGCACCCGCAC
GCGGACGAATCGCTCGGGGGGCATCCAGGGCGGGATCTCCAACGGCGAGA
CGATTATCATCCGGGTATGCTTCAAGCCCACCTCCACCATTGGTCAGGAA
CAGGCCACGGTCACACGCGCCGGCGAGgtaggtgtagttgccccccctcc
ctccctcccccctccctctctctccccctccctccctcatcgttgctctc
tttcgtcaacggcctccatccttctcctctctcggtctctcacccttttc
gtcgaccttcctccctccctccctctccccctcctgtggcgtgcagGAGA
CGACGATGCGCGGCAAGGGCCGGCACGATCCGTGCGTGCTGCCTCGGGCC
GTGCCCATGGTGGAGGCTATGAgtacgtggggagggagggagggagggag
ggagggagggagggaatgtcctaaccgtttcaaatcgagaacgaaatcgg
catgacgtaccgcgcctcaacctctgcctcccctcctccctctctcctcg
cctcccttcctcctctgtctgtatacacagTGGCGCTGGTCCTGGTGGAC
GCGCTTATGTCTCAGGAGGCGCAGTGTAATCTCTTCCCCCGAGTCGAGGG
GGCGGGGGAGGGCATGCACATTAATCCCCTCGGGAAGAAGGTGGAGGGGC
CTCGAGCCTGAGGGAGGAAGGGAGGGAGATTGAATGTATAAAGTACGGCA
GAAGATCCAAGGGAAGGAGGGAGGGAGGGAGTCCACTGAGAGGACGAAAG
CGATAAAAGAAAGAAAAAGAGAAGAATAATGAATAGGTGAGGAAGAAGGA
GGGAAAGAATCCAGAAACGAAGGGAAAGAAGAATGAGAAGAAGAAACAAA
GACGTGATAGATGCCAGAAA
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protein sequence of NO01G05690.4

>NO01G05690.4-protein ID=NO01G05690.4-protein|Name=NO01G05690.4|organism=Nannochloropsis oceanica|type=polypeptide|length=403bp
MLNLLPPSLPTSFPLLPVPLPQLFRISTFGESHGGGVGVVVDGCPPRVEI
TREEIQQELDRRRPGQSRLTTPRNEADSVEILSGVSVDGLTLGTPIGMLV
RNQDHRSNDYDTNSVAYRPSHADATYDAKYGLRAIAGGGRSSARETIGRV
AAAAVAKKVLSMWSGIEIMGYVKKVQEIEATVDPETVTMAAVEANIARCP
DEETAQKMIARIDEIRKTGNSVGGVVECIARNVPAGLGSPVFDKLEAELA
KACMSLPASKGFEVGSGFEGTLLTGKTHNDEFYVDEHGRTRTRTNRSGGI
QGGISNGETIIIRVCFKPTSTIGQEQATVTRAGEETTMRGKGRHDPCVLP
RAVPMVEAMMALVLVDALMSQEAQCNLFPRVEGAGEGMHINPLGKKVEGP
RA*
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protein sequence of NO01G05690.3

>NO01G05690.3-protein ID=NO01G05690.3-protein|Name=NO01G05690.3|organism=Nannochloropsis oceanica|type=polypeptide|length=403bp
MLNLLPPSLPTSFPLLPVPLPQLFRISTFGESHGGGVGVVVDGCPPRVEI
TREEIQQELDRRRPGQSRLTTPRNEADSVEILSGVSVDGLTLGTPIGMLV
RNQDHRSNDYDTNSVAYRPSHADATYDAKYGLRAIAGGGRSSARETIGRV
AAAAVAKKVLSMWSGIEIMGYVKKVQEIEATVDPETVTMAAVEANIARCP
DEETAQKMIARIDEIRKTGNSVGGVVECIARNVPAGLGSPVFDKLEAELA
KACMSLPASKGFEVGSGFEGTLLTGKTHNDEFYVDEHGRTRTRTNRSGGI
QGGISNGETIIIRVCFKPTSTIGQEQATVTRAGEETTMRGKGRHDPCVLP
RAVPMVEAMMALVLVDALMSQEAQCNLFPRVEGAGEGMHINPLGKKVEGP
RA*
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protein sequence of NO01G05690.2

>NO01G05690.2-protein ID=NO01G05690.2-protein|Name=NO01G05690.2|organism=Nannochloropsis oceanica|type=polypeptide|length=470bp
MAATTTMMSTAKRRVTMRRGLPVVVATSASVCSFLMLCLLGTGDAFSIPF
LASPWQAGTSAAAAAAATATASRVRRGGVQMGMGNSFGRLFRISTFGESH
GGGVGVVVDGCPPRVEITREEIQQELDRRRPGQSRLTTPRNEADSVEILS
GVSVDGLTLGTPIGMLVRNQDHRSNDYDTNSVAYRPSHADATYDAKYGLR
AIAGGGRSSARETIGRVAAAAVAKKVLSMWSGIEIMGYVKKVQEIEATVD
PETVTMAAVEANIARCPDEETAQKMIARIDEIRKTGNSVGGVVECIARNV
PAGLGSPVFDKLEAELAKACMSLPASKGFEVGSGFEGTLLTGKTHNDEFY
VDEHGRTRTRTNRSGGIQGGISNGETIIIRVCFKPTSTIGQEQATVTRAG
EETTMRGKGRHDPCVLPRAVPMVEAMMALVLVDALMSQEAQCNLFPRVEG
AGEGMHINPLGKKVEGPRA*
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protein sequence of NO01G05690.1

>NO01G05690.1-protein ID=NO01G05690.1-protein|Name=NO01G05690.1|organism=Nannochloropsis oceanica|type=polypeptide|length=478bp
MAATTTMMSTAKRRVTMRRGLPVVVATSASVCSFLMLCLLGTGDAFSIPF
LASPWQVPSCLCEQAGTSAAAAAAATATASRVRRGGVQMGMGNSFGRLFR
ISTFGESHGGGVGVVVDGCPPRVEITREEIQQELDRRRPGQSRLTTPRNE
ADSVEILSGVSVDGLTLGTPIGMLVRNQDHRSNDYDTNSVAYRPSHADAT
YDAKYGLRAIAGGGRSSARETIGRVAAAAVAKKVLSMWSGIEIMGYVKKV
QEIEATVDPETVTMAAVEANIARCPDEETAQKMIARIDEIRKTGNSVGGV
VECIARNVPAGLGSPVFDKLEAELAKACMSLPASKGFEVGSGFEGTLLTG
KTHNDEFYVDEHGRTRTRTNRSGGIQGGISNGETIIIRVCFKPTSTIGQE
QATVTRAGEETTMRGKGRHDPCVLPRAVPMVEAMMALVLVDALMSQEAQC
NLFPRVEGAGEGMHINPLGKKVEGPRA*
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Synonyms
Publications