NO01G05460, NO01G05460 (gene) Nannochloropsis oceanica

Overview
NameNO01G05460
Unique NameNO01G05460
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3023
Alignment locationchr1:1499033..1502055 +

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Properties
Property NameValue
DescriptionKti12-like protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:1499033..1502055 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR013641Chromatin_KTI12
Homology
BLAST of NO01G05460 vs. NCBI_GenBank
Match: EWM22764.1 (chromatin associated protein kti12 [Nannochloropsis gaditana])

HSP 1 Score: 190.7 bits (483), Expect = 7.600e-45
Identity = 102/170 (60.00%), Postives = 120/170 (70.59%), Query Frame = 0
Query:  109 MARAETTQHCVVWIEASDKAVAQAWNEGREDGYPPELFNDLCCRFEAPNESNRWDRPLIRFIPPXXXXXXXXXXXXXXGVGEGGSKEDKEGERWVL--AYRQVLQALTEGKAPAAGLSTAMAPRNEADALYLLDQATQRLLATLLDRQKTSLPGDSLTLPQANLPVRLAR 277
            MARAETTQHCVVW+    + VA+AWNE RED YPPELF+DL  RFEAP E NRWDRPLI + P                  EG   E+KEG R      Y+QVL A+TEGKAPAAGLSTA APRN+ADAL+LLDQ TQRLL+++L+RQKTS+PGD +T+P+A  PV   R
Sbjct:    1 MARAETTQHCVVWVALEHQHVARAWNESREDRYPPELFDDLWGRFEAPVEGNRWDRPLICYSPRPP--------------SEGA--EEKEGRRSTRDEVYQQVLAAITEGKAPAAGLSTATAPRNDADALFLLDQVTQRLLSSILERQKTSMPGDIITVPEARTPVCFRR 154          
BLAST of NO01G05460 vs. NCBI_GenBank
Match: XP_013385017.1 (protein KTI12 homolog isoform X1 [Lingula anatina])

HSP 1 Score: 181.4 bits (459), Expect = 4.600e-42
Identity = 108/293 (36.86%), Postives = 148/293 (50.51%), Query Frame = 0
Query:    1 MPLVTLCGLPAAGKTTFAEGLVAFLEKELPGQQGRAXXXXXXXXXXXXXXXXXXALHIQKKEGYKDATSEKVTRGGLKSRVDHALNRETVVVLDSMNYIKGFRYQLYCMARAETTQHCVVWIEASDKAVAQAWNEGR--EDGYPPELFNDLCCRFEAPNESNRWDRPLIRFIPPXXXXXXXXXXXXXXGVGEGGSKEDKEGERWVLAYRQVLQALTEGKAPAAGLSTAMAPRNEADALYLLDQATQRLLATLLDRQKTSLPGDSLTLPQANLPVRLARHVSLPELKRLRRQFV 292
            MPLV +CGLP +GKTT    L  +LE EL                         A+ I K E Y ++ SEK  R  LKS V   L+RE V++LDS+NYIKG+RY+L+C+ +A  T H V+  E  D   A  WN+ R  ED Y  E+ + L  RFE P+  +RWD PL    P                                L Y+++  +L + K P   L+T   P +  + LY LD+ TQ ++  +LD QKTS+PGD + +P A   V L +HV+L EL+R RRQF+
Sbjct:    1 MPLVVMCGLPCSGKTTRTNQLKHYLESEL---------------SKAVHIIDDHAIGIDKNEIYAESKSEKDARSALKSAVQRKLSREDVLILDSLNYIKGYRYELFCLTKASQTPHAVIHCEI-DPHQAAEWNKNRSEEDSYSQEILDALVMRFETPDSRSRWDSPLFTIHPTDE-----------------------------LPYKEISDSLFQRKPPPPNLATVAQPLSSTNFLYELDRITQDVINVILDAQKTSVPGDKVAIPNAQEKVELFKHVTLAELQRTRRQFI 248          
BLAST of NO01G05460 vs. NCBI_GenBank
Match: XP_013385019.1 (protein KTI12 homolog isoform X1 [Lingula anatina])

HSP 1 Score: 181.0 bits (458), Expect = 6.100e-42
Identity = 108/293 (36.86%), Postives = 148/293 (50.51%), Query Frame = 0
Query:    1 MPLVTLCGLPAAGKTTFAEGLVAFLEKELPGQQGRAXXXXXXXXXXXXXXXXXXALHIQKKEGYKDATSEKVTRGGLKSRVDHALNRETVVVLDSMNYIKGFRYQLYCMARAETTQHCVVWIEASDKAVAQAWNEGR--EDGYPPELFNDLCCRFEAPNESNRWDRPLIRFIPPXXXXXXXXXXXXXXGVGEGGSKEDKEGERWVLAYRQVLQALTEGKAPAAGLSTAMAPRNEADALYLLDQATQRLLATLLDRQKTSLPGDSLTLPQANLPVRLARHVSLPELKRLRRQFV 292
            MPLV +CGLP +GKTT    L  +LE EL                         A+ I K E Y ++ SEK  R  LKS V   L+RE V++LDS+NYIKG+RY+L+C+ +A  T H V+  E  D   A  WN+ R  ED Y  E+ + L  RFE P+  +RWD PL    P                                L Y+++  +L + K P   L+T   P +  + LY LD+ TQ ++  +LD QKTS+PGD + +P A   V L +HV+L EL+R RRQF+
Sbjct:    1 MPLVVMCGLPCSGKTTRTNQLKHYLESEL---------------SKAVHIIDDHAIGIYKNEIYAESKSEKDARSALKSAVQRKLSREDVLILDSLNYIKGYRYELFCLTKASQTPHAVIHCEI-DPHQAAEWNKNRSEEDSYSQEILDALVMRFETPDSRSRWDSPLFTIHPTDE-----------------------------LPYKEISDSLFQRKPPPPNLATVAQPLSSTNFLYELDRITQDVINVILDAQKTSVPGDKVAIPNAQEKVELFKHVTLAELQRTRRQFI 248          
BLAST of NO01G05460 vs. NCBI_GenBank
Match: XP_019127828.1 (PREDICTED: protein KTI12 homolog [Larimichthys crocea])

HSP 1 Score: 173.7 bits (439), Expect = 9.700e-40
Identity = 100/293 (34.13%), Postives = 152/293 (51.88%), Query Frame = 0
Query:    1 MPLVTLCGLPAAGKTTFAEGLVAFLEKELPGQQGRAXXXXXXXXXXXXXXXXXXALHIQKKEGYKDATSEKVTRGGLKSRVDHALNRETVVVLDSMNYIKGFRYQLYCMARAETTQHCVVWIEASDKAVAQAWNEGRE--DGYPPELFNDLCCRFEAPNESNRWDRPLIRFIPPXXXXXXXXXXXXXXGVGEGGSKEDKEGERWVLAYRQVLQALTEGKAPAAGLSTAMAPRNEADALYLLDQATQRLLATLLDRQKTSLPGDSLTLPQANLPVRLARHVSLPELKRLRRQFV 292
            MPL+ +CG P +GKT  AE L  + E+    +                       L + +   Y D+  EK  R  LK+ V+  +N++ VV+LDS+NYIKG+RY+L+C+ +   T HC+V+   SD   +  WN  R+  + Y  ++F+ L  RFEAP+  NRWD PL   +                       K+D       L Y  +  AL + KAP A  ST   P + A+ LY LD+ TQ +L  + + QKTS+PGD +++P A   ++L R+V++ EL++LRRQF+
Sbjct:    1 MPLIVMCGYPCSGKTRRAEELKEYFEQNTDRK---------------VHIVGDGGLDVDRNTVYADSQKEKNVRSSLKAEVERKVNKDHVVILDSLNYIKGYRYELFCLIKHAQTPHCLVYCLTSDDE-SSTWNTNRDAAEQYTKDIFDALVLRFEAPDSRNRWDNPLFTIL-----------------------KDD------TLPYEAISDALFKRKAPPANQSTQSQPLSSANFLYELDKITQEVLMAVFNAQKTSVPGDLISVPGATEKIKLTRNVNMAELRKLRRQFI 248          
BLAST of NO01G05460 vs. NCBI_GenBank
Match: OWZ23919.1 (hypothetical protein PHMEG_0001144 [Phytophthora megakarya])

HSP 1 Score: 172.9 bits (437), Expect = 1.600e-39
Identity = 109/336 (32.44%), Postives = 163/336 (48.51%), Query Frame = 0
Query:    1 MPLVTLCGLPAAGKTTFAEGLVAFLEKELPGQQGRAXXXXXXXXXXXXXXXXXXALHIQKKEGYKDATSEKVTRGGLKSRVDHALNRETVVVLDSMNYIKGFRYQLYCMARAETTQHCVVWIEASDKAVAQAWNEGREDGYPPELFNDLCCRFEAPNESNRWDRPLIRFIPPXXXXXXXXXXXXXXGVGEGGSKEDKEGERWVLAYRQVLQALTEGKAPAAGLSTAMAPRNEADALYLLDQATQRLLATLLDRQKTSLPGDSLTLP--QANLPVRLARHVSLPELKRLRRQFVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEMRVGDAFVEYIN 335
            MPLV +CG+PA+GKTT A  LV  L+++LP ++                     ++++ K +GY D+ +EK TR  LK+ V+  ++ +T+VVLD++NY KG RY+L+C A+AE+T HCVV+++ S + +A   NE +E  +  +L  +L  RFE P E NRWD PL R  P                       ED       +    +  A+  GK   AGL+T  AP  E+  L  LD  T  ++  LL  Q+ +   D L +P    N  ++L R +S  E +R RRQ++K                                +GD FVEY+N
Sbjct:    1 MPLVVVCGIPASGKTTVATALVDHLQRQLPDEE--------------VVCISTDSVNVDKTQGYGDSKTEKNTRSALKAAVEKVVSTKTIVVLDALNYTKGERYELFCKAKAESTTHCVVYVDTSVE-IATKRNEAQEQQFDSKLLEELAARFEVPVEKNRWDSPLFRLTP-----------------------EDFAANGIGVPLDAITDAVRFGKTVKAGLATKAAPAAESSFLQALDDVTSAIVDALLAHQRDAGVADGLRVPPHAVNAELKLTRPLSTAEARRHRRQYIKITRLRPCPV---------------------ATIGDLFVEYLN 277          
BLAST of NO01G05460 vs. NCBI_GenBank
Match: XP_001180236.2 (PREDICTED: protein KTI12 homolog [Strongylocentrotus purpuratus])

HSP 1 Score: 171.8 bits (434), Expect = 3.700e-39
Identity = 105/293 (35.84%), Postives = 148/293 (50.51%), Query Frame = 0
Query:    1 MPLVTLCGLPAAGKTTFAEGLVAFLEKELPGQQGRAXXXXXXXXXXXXXXXXXXALHIQKKEGYKDATSEKVTRGGLKSRVDHALNRETVVVLDSMNYIKGFRYQLYCMARAETTQHCVVWIEASDKAVAQAWNEGRED--GYPPELFNDLCCRFEAPNESNRWDRPLIRFIPPXXXXXXXXXXXXXXGVGEGGSKEDKEGERWVLAYRQVLQALTEGKAPAAGLSTAMAPRNEADALYLLDQATQRLLATLLDRQKTSLPGDSLTLPQANLPVRLARHVSLPELKRLRRQFV 292
            MPLV +CG P++GK+  +  L +F+E     +                      +    K + Y D+  EK  RG LKS     L+++ +V+LDS+NYIKGFRY+LYC  ++  T HCV++ + +   VA  WN  RED   Y  E+F+ L  RFEAP   NRWD PL    P                     S E        L  +++  AL   KAP   LST   P +  + LY LD+ TQ  + TL+  QKTS+PGD +++P A   V LAR ++  EL+R+RRQF+
Sbjct:    1 MPLVIMCGYPSSGKSKRSNQLQSFIESSTDKK---------------CLVINDDSFGTYKNDVYADSKKEKDARGKLKSSTQRLLSKDDLVILDSLNYIKGFRYELYCAVKSSQTPHCVIFCD-TPVEVATTWNSEREDQEKYTKEIFDGLVMRFEAPVSKNRWDSPLFSIAP---------------------SDE--------LPCQEIYDALFLRKAPPRNLSTVSQPLSATNFLYELDKRTQEAVTTLMSAQKTSIPGDDISIPGAKDKVHLARSINNAELQRIRRQFI 248          
BLAST of NO01G05460 vs. NCBI_GenBank
Match: XP_020469006.1 (protein KTI12 homolog [Monopterus albus])

HSP 1 Score: 171.4 bits (433), Expect = 4.800e-39
Identity = 98/293 (33.45%), Postives = 151/293 (51.54%), Query Frame = 0
Query:    1 MPLVTLCGLPAAGKTTFAEGLVAFLEKELPGQQGRAXXXXXXXXXXXXXXXXXXALHIQKKEGYKDATSEKVTRGGLKSRVDHALNRETVVVLDSMNYIKGFRYQLYCMARAETTQHCVVWIEASDKAVAQAWNEGRE--DGYPPELFNDLCCRFEAPNESNRWDRPLIRFIPPXXXXXXXXXXXXXXGVGEGGSKEDKEGERWVLAYRQVLQALTEGKAPAAGLSTAMAPRNEADALYLLDQATQRLLATLLDRQKTSLPGDSLTLPQANLPVRLARHVSLPELKRLRRQFV 292
            MPL+ +CG P +GKT  AE L  + E+    +                      AL + K + Y D+  EK  R  LK+ V+  +N++ +V+ DS+NYIKG+RY+L+C+ +   T HC+V+   SD+  + +WN  R+  + Y  +LF+ L  RFEAP+  NRWD PL   +                       K+D       L Y  +  AL + KAP    ST   P + +  LY LD+ TQ +L  + + QKTS+PGD +++P A   + L R +++ EL++LRRQF+
Sbjct:    1 MPLIVMCGYPCSGKTRRAEELKVYFEQNTERK---------------VHIVGDRALGVDKSDVYADSQKEKNVRAALKAEVERKVNKDDIVIFDSLNYIKGYRYELFCLIKHAQTPHCLVYCLTSDEQ-SSSWNTNRDAAEQYTQDLFDALVLRFEAPDSRNRWDSPLFTIL-----------------------KDD------TLPYEAISDALFKRKAPPPNQSTQSQPLSSSSFLYELDKITQDVLTAIFNAQKTSVPGDLISVPGATEKMELTRSINMAELRKLRRQFI 248          
BLAST of NO01G05460 vs. NCBI_GenBank
Match: XP_019751117.1 (PREDICTED: protein KTI12 homolog [Hippocampus comes])

HSP 1 Score: 170.6 bits (431), Expect = 8.200e-39
Identity = 99/293 (33.79%), Postives = 151/293 (51.54%), Query Frame = 0
Query:    1 MPLVTLCGLPAAGKTTFAEGLVAFLEKELPGQQGRAXXXXXXXXXXXXXXXXXXALHIQKKEGYKDATSEKVTRGGLKSRVDHALNRETVVVLDSMNYIKGFRYQLYCMARAETTQHCVVWIEASDKAVAQAWNEGR--EDGYPPELFNDLCCRFEAPNESNRWDRPLIRFIPPXXXXXXXXXXXXXXGVGEGGSKEDKEGERWVLAYRQVLQALTEGKAPAAGLSTAMAPRNEADALYLLDQATQRLLATLLDRQKTSLPGDSLTLPQANLPVRLARHVSLPELKRLRRQFV 292
            MPL+ +CG P +GKT  AE L  + E+    +                       L  +K   Y D+  EK  R  LK+ V+  +N++ +V+LDS+NYIKG+RY+L+C+ +   T HC+V+   SD+ V+ AWN  R  E+ Y  ++ + L  RFEAP+  NRWD PL   +                       ++D       L +  +  AL + KAP    ST   P + A+ LY LD+ TQ +L  + + QKTS+PGDS+++P A   + L R V++ EL++ RRQF+
Sbjct:    1 MPLIVMCGYPCSGKTRRAEELKGYFEQNTDRK---------------VHIVGDSPLAAEKNAVYADSQKEKQVRAALKADVERKVNKDDIVILDSLNYIKGYRYELFCLIKHAQTPHCLVYCLTSDE-VSSAWNTSRDAEEQYTQDILDALILRFEAPDSRNRWDSPLFNIL-----------------------QDD------ALPFEAITDALFKRKAPPPNQSTQSQPLSSANFLYELDKTTQDVLMAIFNAQKTSVPGDSISVPGATEKIELTRTVNMAELRKFRRQFI 248          
BLAST of NO01G05460 vs. NCBI_GenBank
Match: ETK85768.1 (hypothetical protein L915_09516 [Phytophthora parasitica] >ETL39197.1 hypothetical protein L916_09419 [Phytophthora parasitica] >ETL92304.1 hypothetical protein L917_09356 [Phytophthora parasitica] >ETO74442.1 hypothetical protein F444_09789 [Phytophthora parasitica P1976] >ETP15624.1 hypothetical protein F441_09658 [Phytophthora parasitica CJ01A1] >KUF87462.1 KTI12 protein [Phytophthora nicotianae])

HSP 1 Score: 170.2 bits (430), Expect = 1.100e-38
Identity = 108/336 (32.14%), Postives = 160/336 (47.62%), Query Frame = 0
Query:    1 MPLVTLCGLPAAGKTTFAEGLVAFLEKELPGQQGRAXXXXXXXXXXXXXXXXXXALHIQKKEGYKDATSEKVTRGGLKSRVDHALNRETVVVLDSMNYIKGFRYQLYCMARAETTQHCVVWIEASDKAVAQAWNEGREDGYPPELFNDLCCRFEAPNESNRWDRPLIRFIPPXXXXXXXXXXXXXXGVGEGGSKEDKEGERWVLAYRQVLQALTEGKAPAAGLSTAMAPRNEADALYLLDQATQRLLATLLDRQKTSLPGDSLTLPQANL--PVRLARHVSLPELKRLRRQFVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEMRVGDAFVEYIN 335
            MPLV +CG+PAAGKTT A  LV  L+++LP Q                       +++ K +GY D+ +EK TR  LK+ V+  +N +T+VVLD++NY KG RY+L+C A+AE+T +CVV+++ +   +A   N   E+   P+L  +L  RFE P + NRWD PL R  P                       +D   +   +    +  A+  GK   AGL+T  AP  E   L  LD+ T  ++  LL  Q+ +   D L +P   +   +RL R +S  E +R RRQ++K                                +GD FVEY+N
Sbjct:    1 MPLVVVCGIPAAGKTTVATALVGHLKRQLPDQD--------------VLCISPATVNVDKTKGYADSRAEKNTRSALKAAVEKVVNTKTIVVLDALNYTKGERYELFCKAKAESTTYCVVYVD-TPMEIALQRNAASEENLDPKLLQELAARFEVPMDKNRWDSPLFRLTP-----------------------DDFAVDGAGIPLDAITDAIRFGKTVKAGLATKAAPAAETSFLQALDEVTNAVVEALLTHQRDAGVADGLRVPPHTVKNELRLTRPLSTAEARRHRRQYIKITRLRPCAVAD---------------------IGDLFVEYLN 277          
BLAST of NO01G05460 vs. NCBI_GenBank
Match: ETM45616.1 (hypothetical protein L914_09384 [Phytophthora parasitica])

HSP 1 Score: 170.2 bits (430), Expect = 1.100e-38
Identity = 108/336 (32.14%), Postives = 160/336 (47.62%), Query Frame = 0
Query:    1 MPLVTLCGLPAAGKTTFAEGLVAFLEKELPGQQGRAXXXXXXXXXXXXXXXXXXALHIQKKEGYKDATSEKVTRGGLKSRVDHALNRETVVVLDSMNYIKGFRYQLYCMARAETTQHCVVWIEASDKAVAQAWNEGREDGYPPELFNDLCCRFEAPNESNRWDRPLIRFIPPXXXXXXXXXXXXXXGVGEGGSKEDKEGERWVLAYRQVLQALTEGKAPAAGLSTAMAPRNEADALYLLDQATQRLLATLLDRQKTSLPGDSLTLPQANL--PVRLARHVSLPELKRLRRQFVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEMRVGDAFVEYIN 335
            MPLV +CG+PAAGKTT A  LV  L+++LP Q                       +++ K +GY D+ +EK TR  LK+ V+  +N +T+VVLD++NY KG RY+L+C A+AE+T +CVV+++ +   +A   N   E+   P+L  +L  RFE P + NRWD PL R  P                       +D   +   +    +  A+  GK   AGL+T  AP  E   L  LD+ T  ++  LL  Q+ +   D L +P   +   +RL R +S  E +R RRQ++K                                +GD FVEY+N
Sbjct:    1 MPLVVVCGIPAAGKTTVATALVGHLKRQLPDQD--------------VLCISPATVNVDKTKGYADSRAEKNTRSALKAAVEKVVNTKTIVVLDALNYTKGERYELFCKAKAESTTYCVVYVD-TPMEIALQRNAASEENLDPKLLQELAARFEVPMDKNRWDSPLFRLTP-----------------------DDFAVDGAGIPLDAITDAIRFGKTVKAGLATKAAPAAETSFLQALDEVTNAVVEALLTNQRDAGVADGLRVPPHTVKNELRLTRPLSTAEARRHRRQYIKITRLRPCAVAD---------------------IGDLFVEYLN 277          
The following BLAST results are available for this feature:
BLAST of NO01G05460 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM22764.17.600e-4560.00chromatin associated protein kti12 [Nannochloropsi... [more]
XP_013385017.14.600e-4236.86protein KTI12 homolog isoform X1 [Lingula anatina][more]
XP_013385019.16.100e-4236.86protein KTI12 homolog isoform X1 [Lingula anatina][more]
XP_019127828.19.700e-4034.13PREDICTED: protein KTI12 homolog [Larimichthys cro... [more]
OWZ23919.11.600e-3932.44hypothetical protein PHMEG_0001144 [Phytophthora m... [more]
XP_001180236.23.700e-3935.84PREDICTED: protein KTI12 homolog [Strongylocentrot... [more]
XP_020469006.14.800e-3933.45protein KTI12 homolog [Monopterus albus][more]
XP_019751117.18.200e-3933.79PREDICTED: protein KTI12 homolog [Hippocampus come... [more]
ETK85768.11.100e-3832.14hypothetical protein L915_09516 [Phytophthora para... [more]
ETM45616.11.100e-3832.14hypothetical protein L914_09384 [Phytophthora para... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL000nonsL000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR047ncniR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR059ngnoR059Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK006303NSK006303Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G05460.1NO01G05460.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|668567gene_575Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100297g4gene7684Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G05460.1NO01G05460.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G05460 ID=NO01G05460|Name=NO01G05460|organism=Nannochloropsis oceanica|type=gene|length=3023bp
CTTTGGAAAAGGCAGTGGCATGGGCCAAGCGGGGTGCGACAGCCAAATGC
AAAGTGTTGTTGTGCGCTGCGGAGGCTCAGTAGGCACTGCCGTTCCTATT
GGGACGATGCTTGGTGAATATGTGGATCATTTTTAAGATAGTCTGTTGGT
AAGTGCATTTATTTGGACACTGTTTTATTCCGCGAGAAGATAAGAGCTGG
GGAGGTCAGAGAGGAATCGATGGCGGGGCAGGACTTGGGGGCAGGACCCC
CCCCGTCGGACGCGACGGCCATGAGCGAGCCTCTAAAATACCCTTTGCAT
GACTATTACCTCCTATTTACTTACTCTTGGAAGACCACCTTTCCTTTCCA
ACATACTCTAAGCAATTGGAAAAGTCACCCGCCCAGCTCCTTCTCTTCGC
CCCATCGTCGTCATTTTCCCGTAGCCTCCCCCTTGTGCCACCGCGCAGAC
GATGCCCCTCGTCACACTCTGTGGGCTACCGGCCGCGGGCAAGACGACCT
TCGCTGAGGGACTTGTTGCTTTCTTGGAAAAGGAGCTACCCGGACAGCAA
GGACGAGCGAGGGAAGAGGAGGGAGGAGGGGGAGGGGCCATGGTTGTACT
CATTAATGAGGAGGCGCTGCACATCCAGAAAAAGGAGGGTTATAAAGgtg
agagaggaagcaactgcgaagcggagagggaaagcgtcgcgtacatttgg
gacgaggatgacacaagtccggtagattctcaatcgacacctcccccatc
cctttcgcttcctcaccatccttgtagACGCCACGTCGGAGAAAGTGACG
CGCGGTGGCCTGAAAAGCAGGGTAGACCATGCATTGAACCGAGAAACTGT
GGTGGTGTTGGACAGTATGAATTATATCAAGGGCTTCCGGTACCAGCTCT
ATTGCATGGCACGGGCGGAGACGACGCAGCATTGTGTCgtgcgtagggag
gaagggagagaagggagattggtttggaagcgatattgtatatacagaca
ggacgaggacagatgcgcggagacgtgagactttgaagcgcatgaagaca
aagaagaccccttctcatctttcccctctctctctccctccctcccccct
cccgatcctcctccccccttctcctccttcctcctccatctatatttgta
gGTATGGATTGAGGCATCGGACAAGGCAGTGGCTCAAGCGTGGAATGAGG
GCCGGGAAGATGGTTACCCGCCGGAGCTgtgagtctttcaggagaaagaa
agagggagggattgaggaagggacggactgaagaaaggaggagggggtgg
agacaagcagacaaccagcaattttcgttcagatccttcattgtttcgtt
tccttacactcctccctccctcccttcctctctccctcccttcctcccta
gGTTTAATGATCTTTGTTGTCGTTTCGAGGCACCCAATGAAAGCAACCGC
TGGGACCGCCCCCTTATCCGCTTCATCCCTCCCTCCCCCCCTTCCTCGTC
CTCCCATCGCTCCCCCCCTCCCGCGGGGGTAGGAGAAGGCGGAAGCAAGG
AGGATAAAGAGGGGGAGAGGTGGGTGTTGGCCTACAGACAGGTGCTACAG
GCGCTGACGGAGGGCAAGGCACCCGCCGCGGGCCTCTCTACTGCAATGgt
aaggagggaaggagggaaggaaggaaggaagtagtgcatggccatggcag
agggcctttacacagcactggaaagagagggatgaagggagcaagggaag
gagggaggaagggaatgagatggatattcccgtgtgtgcgttaggtgagc
gtaaggcaagcgagagggagagaggaaggggggaagaaggtgatggcgcg
aacaaccccgacagtgtttctgtccctagtgcatgcttagctttcccctt
gccctgcttccgcgaggaaggaggggggggagggcggcatgtgtcgatga
cgtggatagttgtcaaactcggggaagagcaatcgaacgaccctcgtgcc
ctccctccctcttccccttttcggtggggcgacgggagggacggacccgg
gtagccttttcctcctcgtttttgctattgttgttgttgtagtagtaaat
aataacaatgataggaatgatgaggggaaaggctggtgggaccgccatag
gaaaagggcgacataccgtgctgcgtaggaatacctttcttacaaaatcc
ctccctctctccctccgtcggtccgtccgtccgtccgtccctccttccct
ctgttcccccttgcctcaggtattaatatcctcttctctaatccaatcca
ggcatcgtctcctcctcgcctcctcacaatcaatatccctccccctttcc
tctccctcccatccttccatcctccctcccttcctccctccctctctccc
cccagGCTCCACGAAACGAAGCGGACGCCCTCTACCTTCTCGACCAAGCC
ACCCAGCGTCTCCTCGCCACCCTCCTGGACCGACAGAAGACATCGCTGCC
GGGCGACTCGCTCACACTCCCCCAAGCCAACCTTCCCGTGCGTTTGGCAA
Ggtgagtccttcctccctcctttcctccctcgttccctcgtcccccttct
gtcacctccctttagtcttgccctctacgggtcgctatcgtagagatagc
gactcgtcctccttgcggccctccctctctgtctccctcagacacgtcag
ccttcccgagctgaagcaactttgactttatctcactttccctccctcct
tccctccctccctccctccctcccttcctccctccctcccttcctcctcc
tcccctttcacagACACGTCAGCCTCCCGGAGCTGAAGCGCCTCCGACGG
CAATTCGTGAAGCAAGCCGCAGAATGGGCCGCTGCGACCCTTGGGGCGGA
CGAAGGCGGGGAGGGCGGGGAGGAGGGAGGAGGGAAGGGGGGGAGGAGAG
AGATGCGTGTGGGGGATGCCTTTGTGGAGTACATCAACATGCATACCAGC
TAGGGGAGGGAGGGAGGGAGGGA
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protein sequence of NO01G05460.1

>NO01G05460.1-protein ID=NO01G05460.1-protein|Name=NO01G05460.1|organism=Nannochloropsis oceanica|type=polypeptide|length=339bp
MPLVTLCGLPAAGKTTFAEGLVAFLEKELPGQQGRAREEEGGGGGAMVVL
INEEALHIQKKEGYKDATSEKVTRGGLKSRVDHALNRETVVVLDSMNYIK
GFRYQLYCMARAETTQHCVVWIEASDKAVAQAWNEGREDGYPPELFNDLC
CRFEAPNESNRWDRPLIRFIPPSPPSSSSHRSPPPAGVGEGGSKEDKEGE
RWVLAYRQVLQALTEGKAPAAGLSTAMAPRNEADALYLLDQATQRLLATL
LDRQKTSLPGDSLTLPQANLPVRLARHVSLPELKRLRRQFVKQAAEWAAA
TLGADEGGEGGEEGGGKGGRREMRVGDAFVEYINMHTS*
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Synonyms
Publications