NO01G05430, NO01G05430 (gene) Nannochloropsis oceanica

Overview
NameNO01G05430
Unique NameNO01G05430
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1555
Alignment locationchr1:1486098..1487652 -

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Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:1486098..1487652 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
BLAST of NO01G05430 vs. NCBI_GenBank
Match: XP_005855033.1 (hypothetical protein NGA_0415500 [Nannochloropsis gaditana CCMP526] >EKU21331.1 hypothetical protein NGA_0415500 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 104.4 bits (259), Expect = 4.000e-19
Identity = 71/188 (37.77%), Postives = 107/188 (56.91%), Query Frame = 0
Query:    1 MRRNLSLLALGITLTFTAAQPTLTLTSIKAVESTRDNKDQWNIKGYFNDPQGDFISSIAVDGVSAILAEGRNEIVSDVTFDAADCRELNNDRGVFCKDTGARISLTRTKRVPKEAMDVAKHSKNKTSSASSYYKVSGVFRRQQF-QNSISMSGSLTATIGNRGGSDEAMLSNCNEK-RGA-RTTKLLC 186
            MRR   LLALGITL  TA Q   TL ++K ++ ++  +DQW++KG  +DP    +  I  +G++  L +     +    F A+DC+   N RGV CK  GAR+S+  ++R PK A +V   + N T     YY  SG+FRR QF Q+ I    ++   + +      AM+S+C+EK +GA RTT++ C
Sbjct:    1 MRRAFFLLALGITLVMTAGQDLFTLKNVKVIDKSKTARDQWSMKGNLDDPTMTVVPLIGQEGLTVELQDMALATLESTAFAASDCKLRRNGRGVSCKTRGARVSIKMSRR-PKGA-NVQNSNYNST---GGYYSASGMFRRLQFLQDPIVFPLTVVLNVPSIPFPPSAMVSSCSEKIKGAGRTTRITC 183          
BLAST of NO01G05430 vs. NCBI_GenBank
Match: EWM30036.1 (hypothetical protein Naga_100179g1 [Nannochloropsis gaditana])

HSP 1 Score: 103.6 bits (257), Expect = 6.800e-19
Identity = 69/188 (36.70%), Postives = 105/188 (55.85%), Query Frame = 0
Query:    1 MRRNLSLLALGITLTFTAAQPTLTLTSIKAVESTRDNKDQWNIKGYFNDPQGDFISSIAVDGVSAILAEGRNEIVSDVTFDAADCRELNNDRGVFCKDTGARISLTRTKRVPKEAMDVAKHSKNKTSSASSYYKVSGVFRRQQF-QNSISMSGSLTATIGNRGGSDEAMLSNCNEK-RGA-RTTKLLC 186
            MRR   LLALGITL  TA Q   TL ++K ++ ++  +DQW++KG  +DP    +  I  +G++  L +     +    F A+DC+   N RGV CK  GAR+S+  ++R PK A        +  +S   YY  SG+FRR QF Q+ I    ++   + +      AM+S+C+EK +GA RTT++ C
Sbjct:   20 MRRAFFLLALGITLVMTAGQDLFTLKNVKVIDKSKTARDQWSMKGNLDDPTMTVVPLIGQEGLTVELQDMALATLESTAFAASDCKLRRNGRGVSCKTRGARVSIKMSRR-PKGAY----VQNSNYNSTGGYYSASGMFRRLQFLQDPIVFPLTVVLNVPSIPFPPSAMVSSCSEKIKGAGRTTRITC 202          
BLAST of NO01G05430 vs. NCBI_GenBank
Match: EWM22005.1 (hypothetical protein Naga_100353g3 [Nannochloropsis gaditana])

HSP 1 Score: 102.4 bits (254), Expect = 1.500e-18
Identity = 73/186 (39.25%), Postives = 102/186 (54.84%), Query Frame = 0
Query:    1 MRRNLSLLALGITLTFTAAQPTLTLTSIKAVESTRDNKDQWNIKGYFNDPQGDFISSIAVDGVSAILAEGRNEIVSDVTFDAADCRELNNDRGVFCKDTGARISLTRTKRVPKEAMDVAKHSKNKTSSASSYYKVSGVFRRQQFQNSISMSGSLTATIGNRG-GSDEAMLSNCNEKRGARTTKLLC 186
            MRR LSLLALG+TL  T  Q  L+L SIK  E TR NKD+W++KG   DP    +S I   G++  L +  ++ +   +F A DC    N +G  CK  GAR+S+  +K  P + + V  +     +S   YY VSG FR  Q Q    +S  LTA +  +G G+    L++C+  RGA TT+  C
Sbjct:   68 MRRGLSLLALGLTLALTTGQ-MLSLKSIKTFERTRMNKDKWSMKGNLEDPTLAVVSGIGTSGLTVTLLDTADDTLDTASFAAGDCMVRKNSKGAKCKMMGARVSIRASK--PPKGVKVKTY-----NSTGGYYSVSGSFRGVQLQEDPVIS-PLTAELTVQGVGTLSQTLTDCS-VRGAGTTRTTC 243          
BLAST of NO01G05430 vs. NCBI_GenBank
Match: EWM30045.1 (hypothetical protein Naga_101600g1 [Nannochloropsis gaditana])

HSP 1 Score: 101.7 bits (252), Expect = 2.600e-18
Identity = 70/188 (37.23%), Postives = 109/188 (57.98%), Query Frame = 0
Query:    1 MRRNLSLLALGITLTFTAAQPTLTLTSIKAVESTRDNKDQWNIKGYFNDPQGDFISSIAVDGVSAILAEGRNEIVSDVTFDAADCRELNNDRGVFCKDTGARISLTRTKRVPKEAMDVAKHSKNKTSSASSYYKVSGVFRRQQF-QNSISMSGSLTATIGNRGGSDEAMLSNCNE--KRGARTTKLLC 186
            MRR LSLLALG+TL  TA Q   TL ++K  E ++  +DQW++KG  ++P  + + +I   G++  L +   + ++   F A +C+ L N RGV CK  GAR+S+ RT+R PK     AK   + ++S   YY  SG+FRR QF Q+ +    ++   +G+   +  A++S C+E  K   R TK+ C
Sbjct:    1 MRRILSLLALGVTLVMTAGQ-EFTLKNVKVAERSKTARDQWSMKGNLDNPAMNVVPAIGQLGLTVNLLDVSLDPLASTAFAATNCKLLRNGRGVRCKKMGARVSIKRTRR-PKG----AKVKSSNSNSTGGYYGASGMFRRLQFLQDPVVTPLTVQVVVGST--TLPAIVSTCSERTKGAGRITKITC 180          
BLAST of NO01G05430 vs. NCBI_GenBank
Match: EWM22002.1 (hypothetical protein Naga_100353g5 [Nannochloropsis gaditana])

HSP 1 Score: 99.8 bits (247), Expect = 9.800e-18
Identity = 72/186 (38.71%), Postives = 97/186 (52.15%), Query Frame = 0
Query:    1 MRRNLSLLALGITLTFTAAQPTLTLTSIKAVESTRDNKDQWNIKGYFNDPQGDFISSIAVDGVSAILAEGRNEIVSDVTFDAADCRELNNDRGVFCKDTGARISLTRTKRVPKEAMDVAKHSKNKTSSASSYYKVSGVFRRQQFQNSISMSGSLTATIGNRG-GSDEAMLSNCNEKRGARTTKLLC 186
            MRR LSLLALG+TL  T  Q  L+L SIK  E T+ NKD+W++K +  DP    +S I   G++  L +  ++ +   TF A DC    N +G  CK  GAR+S+    R  K    V K      +S   YY VSG FRR Q Q    +   LTA +   G G+    L+ C+ K G +T K+ C
Sbjct:   80 MRRGLSLLALGLTLALTTGQ-MLSLKSIKTFERTQMNKDKWSMKAHLEDPTLAVVSGIGTSGLTVTLLDTADDTLDTATFAAGDCMVRKNSKGARCKMMGARVSI----RASKPPKGVGK----SHNSTGGYYSVSGSFRRVQLQED-PVDFPLTAELTVPGVGTLSQTLTGCSVK-GTKTRKVTC 254          
BLAST of NO01G05430 vs. NCBI_GenBank
Match: EWM22004.1 (hypothetical protein Naga_100353g6 [Nannochloropsis gaditana])

HSP 1 Score: 99.8 bits (247), Expect = 9.800e-18
Identity = 72/186 (38.71%), Postives = 97/186 (52.15%), Query Frame = 0
Query:    1 MRRNLSLLALGITLTFTAAQPTLTLTSIKAVESTRDNKDQWNIKGYFNDPQGDFISSIAVDGVSAILAEGRNEIVSDVTFDAADCRELNNDRGVFCKDTGARISLTRTKRVPKEAMDVAKHSKNKTSSASSYYKVSGVFRRQQFQNSISMSGSLTATIGNRG-GSDEAMLSNCNEKRGARTTKLLC 186
            MRR LSLLALG+TL  T  Q  L+L SIK  E T+ NKD+W++K +  DP    +S I   G++  L +  ++ +   TF A DC    N +G  CK  GAR+S+    R  K    V K      +S   YY VSG FRR Q Q    +   LTA +   G G+    L+ C+ K G +T K+ C
Sbjct:   11 MRRGLSLLALGLTLALTTGQ-MLSLKSIKTFERTQMNKDKWSMKAHLEDPTLAVVSGIGTSGLTVTLLDTADDTLDTATFAAGDCMVRKNSKGARCKMMGARVSI----RASKPPKGVGK----SHNSTGGYYSVSGSFRRVQLQED-PVDFPLTAELTVPGVGTLSQTLTGCSVK-GTKTRKVTC 185          
BLAST of NO01G05430 vs. NCBI_GenBank
Match: EWM20105.1 (hypothetical protein Naga_101776g1 [Nannochloropsis gaditana])

HSP 1 Score: 97.1 bits (240), Expect = 6.300e-17
Identity = 65/176 (36.93%), Postives = 104/176 (59.09%), Query Frame = 0
Query:    1 MRRNLSLLALGITLTFTAAQPTLTLTSIKAVESTRDNKDQWNIKGYFNDPQGDFISSIAVDGVSAILAEGRNEIVSDVTFDAADCRELNNDRGVFCKDTGARISLTRTKRVPKEAMDVAKHSKNKTSSASSYYKVSGVFRRQQF-QNSISMSGSLTATIGNRGGSDEAMLSNCNEK 176
            MRR LSLLALG+TL  TA Q   TL ++K  E ++  +DQW++KG  ++P  + + +I   G++  L +   + ++   F A +C+ L N RGV CK  GAR+S+ RT+R PK     AK   + ++S   YY  SG+FRR QF Q+ +    ++   +G+   +  A++S C+E+
Sbjct:   37 MRRILSLLALGVTLVMTAGQ-EFTLKNVKVAERSKTARDQWSMKGNLDNPAMNVVPAIGQLGLTVNLLDVSLDPLASTAFAATNCKLLRNGRGVSCKKMGARVSIKRTRR-PKG----AKVKSSNSNSTGGYYGASGMFRRLQFLQDPVVTPVTVQVKVGST--TLPAIVSTCSER 204          
BLAST of NO01G05430 vs. NCBI_GenBank
Match: XP_005852576.1 (hypothetical protein NGA_0721300 [Nannochloropsis gaditana CCMP526] >EKU23255.1 hypothetical protein NGA_0721300 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 95.9 bits (237), Expect = 1.400e-16
Identity = 70/186 (37.63%), Postives = 98/186 (52.69%), Query Frame = 0
Query:    1 MRRNLSLLALGITLTFTAAQPTLTLTSIKAVESTRDNKDQWNIKGYFNDPQGDFISSIAVDGVSAILAEGRNEIVSDVTFDAADCRELNNDRGVFCKDTGARISLTRTKRVPKEAMDVAKHSKNKTSSASSYYKVSGVFRRQQFQNSISMSGSLTATIGNRG-GSDEAMLSNCNEKRGARTTKLLC 186
            MRR LSLLALG+TL  T  Q  L+L SIK  E T+ NKD+W++KG+  DP    +S I  +G++  L +   + +   +F A DC    + +G  CK  GAR+S+    R  K    V K      +S   Y+ VSG FRR Q Q    +   LTA +   G G+    L+ C+ K G +T K+ C
Sbjct:    1 MRRGLSLLALGLTLALTTGQ-MLSLKSIKTFERTQMNKDKWSMKGHLEDPTLAVVSGIGTNGLTVTLLDMAADTLDTASFAAGDCMVRKSSKGARCKMMGARVSI----RASKPPKGVGK----SHNSTGGYFSVSGSFRRVQLQED-PVDFPLTAELTVPGVGTLSQTLTGCSVK-GTKTRKVTC 175          
BLAST of NO01G05430 vs. NCBI_GenBank
Match: EWM20135.1 (hypothetical protein Naga_101626g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 94.7 bits (234), Expect = 3.100e-16
Identity = 69/188 (36.70%), Postives = 102/188 (54.26%), Query Frame = 0
Query:    1 MRRNLSLLALGITLTFTAAQPTLTLTSIKAVESTRDNKDQWNIKGYFNDPQGDFISSIAVDGVSAILAEGRNEIVSDVTFDAADCRELNNDRGVFCKDTGARISLTRTKRVPKEAMDVAKHSKNKTSSASSYYKVSGVFRRQQF-QNSISMSGSLTATIGNRGGSDEAMLSNCNE--KRGARTTKLLC 186
            MR  LSLLALGITL  TA Q   TL +IK     +  +DQW++KG  ++P  + +  I   G++  L +     ++   F A +C+ L N RGV CK  GAR+ + RT+R PK     AK   +  +S   YY  SG+FRR QF Q+++    ++   +G    +  A++S C+E  K   R TK+ C
Sbjct:    1 MRCILSLLALGITLVMTAGQ-EFTLKNIKVAGRFKTARDQWSMKGNLDNPTMNVVPVIGQSGLTVNLLDASLSPLASAAFAATNCKLLRNARGVSCKSMGARVYIKRTRR-PK----AAKVKSSSYNSTGGYYAASGMFRRLQFLQDTVVTPLTVQLVVGTT--TLPAIVSTCSERTKSAGRITKITC 180          
BLAST of NO01G05430 vs. NCBI_GenBank
Match: EWM20521.1 (hypothetical protein Naga_100335g8, partial [Nannochloropsis gaditana])

HSP 1 Score: 92.8 bits (229), Expect = 1.200e-15
Identity = 71/191 (37.17%), Postives = 102/191 (53.40%), Query Frame = 0
Query:    1 MRRNLSLLALGITL---TFTAAQPTLTLTSIKAVESTRDNKDQWNIKGYFNDPQGDFISSIAVDGVSAILAEGRNEIVSDVTFDAADCRELNNDRGVFCKDTGARISLTRTKRVPKEAMDVAKHSKNKTSSASSYYKVSGVFRRQQFQNSISMSGSLTATIGNRGGSDEAMLSNCNE--KRGARTTKLLCK 187
            MR  LSLLALGITL     T A   L L SI+AV+ +  NKD W +KG  NDP   F+ +I   G++  L +   + ++ V F A+DCR   + R   CK  GAR+S+ R++R PK       H+K+  +S   YY V+G FR   F  +  +S  LTA +   G      L +C +  ++ AR+T   C+
Sbjct:    1 MRSPLSLLALGITLGSTLVTTAGQDLNLKSIRAVDRSVTNKDTWKMKGNINDPSLTFVPAIGQTGLTVELQDAATDPLNTVAFAASDCRVPAHGRRAACKIRGARVSIKRSRR-PKIKTPKTVHAKS-YNSTGGYYSVTGTFRGLTFLENPVVS-PLTAALRVNGSVLSDTLISCYDLARKSARSTISQCE 188          
The following BLAST results are available for this feature:
BLAST of NO01G05430 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 16
Match NameE-valueIdentityDescription
XP_005855033.14.000e-1937.77hypothetical protein NGA_0415500 [Nannochloropsis ... [more]
EWM30036.16.800e-1936.70hypothetical protein Naga_100179g1 [Nannochloropsi... [more]
EWM22005.11.500e-1839.25hypothetical protein Naga_100353g3 [Nannochloropsi... [more]
EWM30045.12.600e-1837.23hypothetical protein Naga_101600g1 [Nannochloropsi... [more]
EWM22002.19.800e-1838.71hypothetical protein Naga_100353g5 [Nannochloropsi... [more]
EWM22004.19.800e-1838.71hypothetical protein Naga_100353g6 [Nannochloropsi... [more]
EWM20105.16.300e-1736.93hypothetical protein Naga_101776g1 [Nannochloropsi... [more]
XP_005852576.11.400e-1637.63hypothetical protein NGA_0721300 [Nannochloropsis ... [more]
EWM20135.13.100e-1636.70hypothetical protein Naga_101626g1, partial [Nanno... [more]
EWM20521.11.200e-1537.17hypothetical protein Naga_100335g8, partial [Nanno... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL000nonsL000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR047ncniR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR059ngnoR059Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G05430.1NO01G05430.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G05430.1NO01G05430.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G05430 ID=NO01G05430|Name=NO01G05430|organism=Nannochloropsis oceanica|type=gene|length=1555bp
CAAACAGCACCATAGACCCTTCCGATTTGCCGACAGAACAGCTTGTTGGG
TGGGCAAACTACATTCTCCTTTCCCTTCTGCCCTTTCCCCTTCCCTTTCC
CTCTTCTTCTTCCGATTTTCTCCACTTCTTCTCACCAACTCCTCGCCATT
CAAGTATATCTGCCACGATGGGGTTGTCTCACTCCATTGATCTGTGTCCT
GCGTACGTCGGAGTCCTGAGGAGTGGAGATCATGTGTACCAAACGACTGA
ACCTCATTCCAAATGCAATGCTCTTATATAAGCAAGCATCTCGTTCTCTT
TTCTTCCGTCTCTTCTCATCCTTCTCATTGTCCTTCCCTCTTCCTGTCTC
CTAGGGTGGGCAAGTCGTATGCTGCGCCTCCCGCTTGCCCCTACGTGCAC
CCAGATTCACATATTTGCACAAGGCGCCTCACGCACAAAAGGATGACACC
AATTATTTTGTACCTGTCACCCCTTCTCCTCATCTCCGCTTGGCCGCAGA
TTGATCTCACGCCGTAGATACTGCATGCTTTTGCCACCCTCCACCAAAGC
ACTCATCTTCCTCACATCTACACCTCGCACCATTACAGCAAACAAGCTTT
CCCCGTGAAAAACTATGCGTCGTAATCTGTCTTTGCTTGCCCTCGGTATC
ACCCTTACCTTCACGGCGGCCCAGCCGACGCTGACCCTCACCTCAATCAA
GGCAGTCGAGTCGACCAGGGACAACAAAGACCAATGGAATATCAAGGGCT
ACTTCAACGATCCTCAGGGAGATTTCATCTCGTCCATTGCTGTCGACGGA
GTATCCGCAATTCTTGCTGAAGGACGCAATGAAATTGTGAGCGATGTGAC
TTTTGACGCGGCTGATTGCAGAGAGCTCAACAACGACAGGGGAGTCTTTT
GCAAGGATACGGGCGCCCGTATCTCGCTCACGAGGACTAAGAGGGTACCC
AAGGAGGCCATGGATGTCGCAAAGCACAGCAAGAATAAGACCAGCAGCGC
TTCCTCCTACTACAAAGTGTCAGGTGTCTTTCGCCGTCAGCAATTCCAGA
ACTCTATCTCTATGTCGGGGAGTCTGACAGCTACTATTGGCAACAGGGGG
GGTAGCGACGAGGCCATGCTCTCTAACTGCAACGAGAAGAGGGGAGCCAG
GACCACCAAGCTTCTTTGCAAGTAAATGCAGTCATACGGTACTTGGGCAT
CCATCAGGTATCTCACTCTGGCCAGGAACGCTCTACGTCCTGTCTCATAT
ATGTTTATCTGTGACTGCGTCCTGTGTTCACGCTTCCAGTCTGGAAACCA
AGCTTCCATTCCAACCGCGTCGGCCTGTCCATGTGCGTAAGAATGTTTTT
TGTCTCTTGTGTTGTGTATGCGATGTGCTGTGTATGTGTCCATTTCCTTG
TTTAGCACTGCTTGTATGGTGTGCTTACATTCCCTGGATCGCCCGAGAAG
AGTCAGTCCCGGAGTTTAAGCTTCGGAGACTCGGTTCTTTCAATCTTAAT
AATTCCCTTACCAAGAAAGAAGAATCAATTGAGTCAGCAAGACCCAAAAG
AATGC
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protein sequence of NO01G05430.1

>NO01G05430.1-protein ID=NO01G05430.1-protein|Name=NO01G05430.1|organism=Nannochloropsis oceanica|type=polypeptide|length=187bp
MRRNLSLLALGITLTFTAAQPTLTLTSIKAVESTRDNKDQWNIKGYFNDP
QGDFISSIAVDGVSAILAEGRNEIVSDVTFDAADCRELNNDRGVFCKDTG
ARISLTRTKRVPKEAMDVAKHSKNKTSSASSYYKVSGVFRRQQFQNSISM
SGSLTATIGNRGGSDEAMLSNCNEKRGARTTKLLCK*
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Synonyms
Publications