NO01G05360, NO01G05360 (gene) Nannochloropsis oceanica

Overview
NameNO01G05360
Unique NameNO01G05360
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1348
Alignment locationchr1:1434356..1435703 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:1434356..1435703 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO01G05360 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL000nonsL000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR047ncniR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR059ngnoR059Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G05360.1NO01G05360.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G05360.1NO01G05360.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G05360 ID=NO01G05360|Name=NO01G05360|organism=Nannochloropsis oceanica|type=gene|length=1348bp
GGTACTTTGTTTTTGGTTTTTATTGTCATTTCCTTCTCAATTAATGTATT
TTTTCGTATTTTTTTGGTATATTTTTTACGATATTTCTACCTCAGTTTGG
ACACCATTTTATCAAGTGGAAAAATTATGACTTGATCATTAGTGGGGAGA
CGCCAGGGAATATGGAGCTTCACAAATATCTGCGATCATCATTGGACTTG
GCGTGCGCTTCAATAAATCCACTTCCCCAATTATATCCTCATCTATCTCC
TGCACTACATTCTGCTTCCTTTTCCCTTCCCGTACCAACATTGCATCGAT
AGGGAAAGTGGGGATTTTTCCGTATTTTCTACGAACTTGTCTTTCGGATC
TCCACCTTGTCTCAGGTACATTCTTATTAATGTACATCGCCGCATCTTTC
CTGAATCCGTCTGTAGCTCTTTTACTTGGCCATACGATCACGGGCCGGGC
AGTTACATACTCAAGCAAAAGTCTGACCTGTATAGGGAAAGAAGACGATA
GAGAAAGAAAAGATAAGTCTGAGATAGAATTAAATAATTATTAAAATTAA
TAATACCTTTCCTGGAGTCCACCGATAGCTGCTGGTTTGGCTGCATTGGT
CCTTCATGTTTTAATCCCTGTACAAGTGGGTGATAATCACTTGAGTTCAC
GGTGCTCACAATGCACACACATCGGACATTGGATAGACTCTGCAAAAATG
GGCTGCACGTTACGATAATGGGCGGCTGGGCTGCACGTTACGATAGTCGT
CGATCGTCATGTTCATTTAAGTCATAGTCGTAGCCATCTTAGTCATATAC
ACGATGATTCCAACCGAAAATGACGTTGACAAATAATAGTGCGCATGTTT
TGCATTAAGACTACGACTACGTCATTTTGTTGCATAGGGAGGAGGAGGGG
AGGAGGGGAGGAGGGGAGGAGGGGAGGAGGAGGGGGGAGGAGGGGAGGAG
AGGAGAGGAGAGGAGAGGAGGGGAGGAGGGGAGGAGGAGGGGAGGAGGGG
AGGAGGAGGGAAGGAGGGGAAGAGGAGGGGAGGAGGAGGGGAGGAGGGGA
GGAGGGGAGGAGGGGAAGAGGGGAAGAGGAGGGGAGGAGGGGAGGAGGGG
AGCAGGGGAGGAGGAGGGGAGGAGGGGAGGAGGGGAGGAGCAGGGGAGGA
GCAGGGGGAGGAGCAGGAGAGGAGCAAGGGAGGAGCAGGGGAGGAGGGGA
GGAGCAGGGGGAGGAGCAGGGGAGGAGGAGGGGAGGAGCAGGGGGAGGAG
CAGGGGGAGGAGCAGGGGAGGAGGGGAGGAGGGCAGGCTTCCGACAATCT
CGGTCGTTGCAGACCGGCATAAAGACATCTCCTTCTATCATATTTTGA
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protein sequence of NO01G05360.1

>NO01G05360.1-protein ID=NO01G05360.1-protein|Name=NO01G05360.1|organism=Nannochloropsis oceanica|type=polypeptide|length=168bp
MFCIKTTTTSFCCIGRRRGGGEEGRRGGGGGRRGGEERRGEEGRRGGGGE
EGRRREGGEEEGRRRGGGEEGRRGRGEEEGRRGGGEQGRRRGGGEEGRSR
GGAGGGAGEEQGRSRGGGEEQGEEQGRRRGGAGGGAGGGAGEEGRRAGFR
QSRSLQTGIKTSPSIIF*
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Synonyms
Publications