NO01G05250, NO01G05250 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G05250 vs. NCBI_GenBank
Match: XP_012212473.1 (hypothetical protein SPRG_17697 [Saprolegnia parasitica CBS 223.65] >KDO16818.1 hypothetical protein SPRG_17697 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 261.9 bits (668), Expect = 2.600e-66 Identity = 136/268 (50.75%), Postives = 172/268 (64.18%), Query Frame = 0 Query: 30 KVPFTQLFQHYPVLDPLYT-QYEKNFYASTYVKFAQDTWPVLPLALCGMYALMIIVGTKVMVSRPKHEWKTALACWNLMLSIFSFCGMIRTVPHLLHNVATLPFKDTICRHPAETYGEGACGMWVMLFIFSKVPELVDTVFIVFRKSKLQFLHWYHHITVLLFCWHSYAVTSSTGLYFVAMNYSVHAIMYAYYYLTAINAWPKWIPPSIITVAQISQMIVGVGICASSFYFLYTDPEHCQVKRQNVYAGALMYGSYLYLFCDFFVRRF 297 + PF L + YP L PLY +E++F S F D+ L + LC +Y ++ G VM SR + KTALA WNL+L+ FSFCG +RTVP LL ++ +IC YG G G+WV LFIFSKVPEL+DT FIV RK L FLHWYHHITVL+FCWH++AV S++GLYFVAMNYSVHAIMY YY+LTA P+W ++TVAQ+SQM+VGV +C S ++ C V N+ G LMY SY LF FF+ R+ Sbjct: 2 RAPF--LHEAYPALSPLYPFAFERDFVLSWQPGFCADSMG-LAIGLCAVYCVLCYTGRHVMASRAPFDLKTALAAWNLLLATFSFCGAVRTVPFLLDSIYQRGAYASICSEATNHYGNGPTGLWVALFIFSKVPELIDTFFIVVRKKPLIFLHWYHHITVLMFCWHAFAVRSASGLYFVAMNYSVHAIMYFYYFLTARGYRPRW--ALLVTVAQLSQMVVGVAVCTMSVLYI-RQGASCHVNHDNLKWGILMYSSYFALFLKFFIERY 263
BLAST of NO01G05250 vs. NCBI_GenBank
Match: XP_012202668.1 (hypothetical protein SPRG_07927 [Saprolegnia parasitica CBS 223.65] >KDO26525.1 hypothetical protein SPRG_07927 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 261.5 bits (667), Expect = 3.300e-66 Identity = 136/268 (50.75%), Postives = 172/268 (64.18%), Query Frame = 0 Query: 30 KVPFTQLFQHYPVLDPLYT-QYEKNFYASTYVKFAQDTWPVLPLALCGMYALMIIVGTKVMVSRPKHEWKTALACWNLMLSIFSFCGMIRTVPHLLHNVATLPFKDTICRHPAETYGEGACGMWVMLFIFSKVPELVDTVFIVFRKSKLQFLHWYHHITVLLFCWHSYAVTSSTGLYFVAMNYSVHAIMYAYYYLTAINAWPKWIPPSIITVAQISQMIVGVGICASSFYFLYTDPEHCQVKRQNVYAGALMYGSYLYLFCDFFVRRF 297 + PF L + YP L PLY +E++F S F D+ L + LC +Y ++ G VM SR + KTALA WNL+L+ FSFCG +RTVP LL ++ +IC YG G G+WV LFIFSKVPEL+DT FIV RK L FLHWYHHITVL+FCWH++AV S++GLYFVAMNYSVHAIMY YY+LTA P+W ++TVAQ+SQM+VGV +C S ++ C V N+ G LMY SY LF FF+ R+ Sbjct: 2 RAPF--LHEAYPALSPLYPFAFERDFVLSWQPGFCADSMG-LAIGLCAVYCVLCYTGRHVMASRAPFDLKTALAAWNLLLATFSFCGAVRTVPFLLDSIYQRGAYASICSEATNHYGNGPTGLWVALFIFSKVPELIDTFFIVVRKKPLIFLHWYHHITVLMFCWHAFAVRSASGLYFVAMNYSVHAIMYFYYFLTARGYRPRW--ALLVTVAQLSQMVVGVAVCTMSVLYI-RQGASCHVDESNLSWGILMYSSYFALFLKFFIERY 263
BLAST of NO01G05250 vs. NCBI_GenBank
Match: XP_012202669.1 (hypothetical protein SPRG_07928 [Saprolegnia parasitica CBS 223.65] >KDO26526.1 hypothetical protein SPRG_07928 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 260.0 bits (663), Expect = 9.700e-66 Identity = 135/268 (50.37%), Postives = 172/268 (64.18%), Query Frame = 0 Query: 30 KVPFTQLFQHYPVLDPLYT-QYEKNFYASTYVKFAQDTWPVLPLALCGMYALMIIVGTKVMVSRPKHEWKTALACWNLMLSIFSFCGMIRTVPHLLHNVATLPFKDTICRHPAETYGEGACGMWVMLFIFSKVPELVDTVFIVFRKSKLQFLHWYHHITVLLFCWHSYAVTSSTGLYFVAMNYSVHAIMYAYYYLTAINAWPKWIPPSIITVAQISQMIVGVGICASSFYFLYTDPEHCQVKRQNVYAGALMYGSYLYLFCDFFVRRF 297 + PF L + YP L PLY +E++F + F D+ L + LC +Y ++ G VM SR + KTALA WNL+L+ FSFCG +RTVP LL ++ +IC YG G G+WV LFIFSKVPEL+DT FIV RK L FLHWYHHITVL+FCWH++AV S++GLYFVAMNYSVHAIMY YY+LTA P+W ++TVAQ+SQM+VGV +C S ++ C V N+ G LMY SY LF FF+ R+ Sbjct: 2 RAPF--LHEAYPALSPLYPFAFERDFVPTWQPGFCADSMG-LAIGLCAVYCVLCYTGRHVMASRAPFDLKTALAAWNLLLATFSFCGAVRTVPFLLDSIYQRGAYASICSEATNHYGNGPTGLWVALFIFSKVPELIDTFFIVVRKKPLIFLHWYHHITVLMFCWHAFAVRSASGLYFVAMNYSVHAIMYFYYFLTARGYRPRW--ALLVTVAQLSQMVVGVAVCTMSVLYI-RQGAVCHVNHDNLKWGILMYSSYFALFLKFFIERY 263
BLAST of NO01G05250 vs. NCBI_GenBank
Match: XP_008620377.1 (hypothetical protein SDRG_15967 [Saprolegnia diclina VS20] >EQC26232.1 hypothetical protein SDRG_15967 [Saprolegnia diclina VS20]) HSP 1 Score: 259.2 bits (661), Expect = 1.700e-65 Identity = 134/262 (51.15%), Postives = 169/262 (64.50%), Query Frame = 0 Query: 36 LFQHYPVLDPLYT-QYEKNFYASTYVKFAQDTWPVLPLALCGMYALMIIVGTKVMVSRPKHEWKTALACWNLMLSIFSFCGMIRTVPHLLHNVATLPFKDTICRHPAETYGEGACGMWVMLFIFSKVPELVDTVFIVFRKSKLQFLHWYHHITVLLFCWHSYAVTSSTGLYFVAMNYSVHAIMYAYYYLTAINAWPKWIPPSIITVAQISQMIVGVGICASSFYFLYTDPEHCQVKRQNVYAGALMYGSYLYLFCDFFVRRF 297 L + YP L PLY +E++F S F D+ L + LC +Y ++ G M SR + KTALA WNL+L+ FSFCG +RTVP LL ++ +IC + YG G G+WV LFIFSKVPEL+DT FIV RK L FLHWYHHITVL+FCWH++AV S++GLYFVAMNYSVHAIMY YY+LTA PKW ++TVAQ+SQM+VGV +C S ++ C V N+ G LMY SY LF FF+ R+ Sbjct: 6 LHEAYPALSPLYPFAFERDFVPSWQPGFCADSMG-LAIGLCAIYCVLCYTGRHFMASRAPFDLKTALAGWNLLLATFSFCGAVRTVPFLLDSIYQRGAYASICSEATDHYGNGPTGLWVALFIFSKVPELIDTFFIVVRKKPLIFLHWYHHITVLMFCWHAFAVRSASGLYFVAMNYSVHAIMYFYYFLTARGYRPKW--ALLVTVAQLSQMVVGVAVCTMSVLYIRRGAT-CYVNHDNLKWGILMYSSYFALFLKFFIERY 263
BLAST of NO01G05250 vs. NCBI_GenBank
Match: OEU18932.1 (GNS1/SUR4 membrane protein [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 256.1 bits (653), Expect = 1.400e-64 Identity = 127/276 (46.01%), Postives = 175/276 (63.41%), Query Frame = 0 Query: 31 VPFTQLFQHYPVLDPLYTQYEKNFYASTYVKFAQDTWPVLPLALCGMYALMIIVGTKVMVSRPKHEWKTALACWNLMLSIFSFCGMIRTVPHLLHNVATLPFKDTICRHPAET---YGEGACGMWVMLFIFSKVPELVDTVFIVFRKSKLQFLHWYHHITVLLFCWHSYAVTSSTGLYFVAMNYSVHAIMYAYYYLTAINAWPKWIPPSIITVAQISQMIVGVGICASSFYFLYTDPEHCQVKRQNVYAGALMYGSYLYLFCDFFVRRFL--RGGK 302 + + + YP L+P Y ++EKN+ +++ + ++P+ +Y ++I VG M +R + +A WNL LS+FS+ GM RT+P LLHN+ L +D +C ET YG G+ G+W +LF+ SK PEL+DT FIV K L FLHWYHHITVLL+CWHSY TS G++F MNYSVHA MY YY+L A+ PKW P IIT+ QISQM+VGV + + FY+ TDP C ++ +N A +MYGSYL+LF FF R+ +GGK Sbjct: 17 IAYREFSCEYPQLEPFYFEFEKNYDPIPLLEWMR-YHSMIPVYAVILYGVLITVGQYAMRNREPFNLRRLMAFWNLALSVFSWIGMFRTLPQLLHNLYHLSMRDNLCMDSRETIASYGSGSSGLWFLLFVLSKFPELIDTFFIVIHKKPLIFLHWYHHITVLLYCWHSYVTTSPLGIFFSVMNYSVHASMYGYYFLMAMKMRPKWFNPIIITIFQISQMVVGVSVTLAGFYYYKTDPT-CGIQNENNTAAFVMYGSYLFLFLQFFFGRYFKKKGGK 290
BLAST of NO01G05250 vs. NCBI_GenBank
Match: OQS05290.1 (elongation of very long chain fatty acids protein [Thraustotheca clavata]) HSP 1 Score: 252.7 bits (644), Expect = 1.600e-63 Identity = 128/268 (47.76%), Postives = 173/268 (64.55%), Query Frame = 0 Query: 30 KVPFTQLFQHYPVLDPLYT-QYEKNFYASTYVKFAQDTWPVLPLALCGMYALMIIVGTKVMVSRPKHEWKTALACWNLMLSIFSFCGMIRTVPHLLHNVATLPFKDTICRHPAETYGEGACGMWVMLFIFSKVPELVDTVFIVFRKSKLQFLHWYHHITVLLFCWHSYAVTSSTGLYFVAMNYSVHAIMYAYYYLTAINAWPKWIPPSIITVAQISQMIVGVGICASSFYFLYTDPEHCQVKRQNVYAGALMYGSYLYLFCDFFVRRF 297 +VP+ L + +P L LY +E +F S +F ++ +ALC +Y ++ G +M +R + K ALA WNL+L+ FSFCG +RT P L+H++ +IC + YG G G+WV LFIFSKVPEL+DT FIV RK L FLHWYHHITVL+FCWH++AV S++GLYFVAMNYSVHAIMY YY+LTAI P+W ++T+ Q+SQM+VGV +C S ++ + C V N+ G LMY SY LF FF+ R+ Sbjct: 2 RVPY--LHEVFPSLSLLYPFSFENDFVLSWQPEFCAESMQ-YAVALCALYCILCYSGRHIMANRSPFDLKWALAGWNLLLATFSFCGAVRTAPFLIHSIYERGLYHSICSEATDHYGNGPVGLWVALFIFSKVPELIDTFFIVVRKKPLIFLHWYHHITVLMFCWHAFAVRSASGLYFVAMNYSVHAIMYFYYFLTAIGYRPQW--ALMVTIVQLSQMVVGVAVCTMSVLYI-RQGDACYVDHSNLKWGILMYSSYFILFLKFFIERY 263
BLAST of NO01G05250 vs. NCBI_GenBank
Match: XP_008865117.1 (hypothetical protein H310_03128 [Aphanomyces invadans] >XP_008865118.1 hypothetical protein, variant 1 [Aphanomyces invadans] >ETW07042.1 hypothetical protein H310_03128 [Aphanomyces invadans] >ETW07043.1 hypothetical protein, variant 1 [Aphanomyces invadans]) HSP 1 Score: 250.8 bits (639), Expect = 5.900e-63 Identity = 126/266 (47.37%), Postives = 167/266 (62.78%), Query Frame = 0 Query: 36 LFQHYPVLDPLYT-QYEKNFYASTYVKFAQDTWPVLPLALCGMYALMIIVGTKVMVSRPKHEWKTALACWNLMLSIFSFCGMIRTVPHLLHNVATLPFKDTICRHPAETYGEGACGMWVMLFIFSKVPELVDTVFIVFRKSKLQFLHWYHHITVLLFCWHSYAVTSSTGLYFVAMNYSVHAIMYAYYYLTAINAWPKWIPPSIITVAQISQMIVGVGICASSFYFLYTDPEH----CQVKRQNVYAGALMYGSYLYLFCDFFVRRF 297 L + YP L PLY +E +F + +F + T + +ALC Y VG K M SR + ALA WNL LS+FS CG +RTVP L+H++ ++C YG G G WV LFIFSK+PEL DT F+V RK L+FLHWYHHITVLL+CWH+Y+V SS+GLYFVAMNY+VHA+MY YY+LTA+ P+W ++T+ Q+SQM+VGV +C ++ FL T C N+ G +MY SY LF FF++R+ Sbjct: 18 LHEFYPCLAPLYPFAFENSFMLTWEAQFCRSTM-YMCMALCAAYGFSCYVGKKFMRSREAFDLTPALALWNLTLSVFSACGALRTVPFLVHSIYHHGVYHSVCSDATLHYGNGPVGFWVSLFIFSKIPELFDTFFVVIRKKPLRFLHWYHHITVLLYCWHAYSVLSSSGLYFVAMNYTVHAVMYMYYFLTALGYRPRW--AYVVTMLQMSQMVVGVAVCVANVIFLSTSSSPSSAVCHASHSNLLFGVVMYASYFALFLHFFIQRY 280
BLAST of NO01G05250 vs. NCBI_GenBank
Match: EWM28304.1 (fatty-acyl [Nannochloropsis gaditana]) HSP 1 Score: 247.7 bits (631), Expect = 5.000e-62 Identity = 132/283 (46.64%), Postives = 170/283 (60.07%), Query Frame = 0 Query: 33 FTQLFQHYPVLDPLYTQYEKNFYASTYVKFAQDTWPVLPLALCGMYALMIIVGTKVMVSRPKHEWKTALACWNLMLSIFSFCGMIRTVPHLLHNVATLPFKDTICRHPAETYGEGACGMWVMLFIFSKVPELVDTVFIVFRKSKLQFLHWYHHITVLLFCWHSYAVTSSTGLYFVAMNYSVHAIMYAYYYLTAINAWPKWIPPSIITVAQISQMIVGVGICASSFYFL-YTDPEHCQVKRQNVYAGALMYGSYLYLFCDFFVRRFLRGGKPRLGEEKSAVLTM 315 FTQLFQ P ++P Y ++EK + +S ++ + P +P+A +Y + I G +M +R + K LA WNL LS+FS GM+R VPHL++ AT C P YG A G WV FI SK+ EL+DT FIV RK LQFLHWYHH+TVLLF W Y + G+ FVAMNYSVHAIMY YY+L A+ P W+ P IT+ QISQM+VGV A FY + E C V + + A +MY +YLYLFC+F VRRF+ G K K+ V M Sbjct: 41 FTQLFQVIPAIEPFYMEWEKKYDSSPVYEWMKSV-PWVPIAGVILYVVGIFGGQALMKNRKPFDLKWPLAYWNLALSLFSIMGMVRVVPHLIYLTATKGLGVVACGAPEPLYGNAAVGFWVQAFILSKLAELIDTAFIVLRKKPLQFLHWYHHVTVLLFTWFCY-THENPGIIFVAMNYSVHAIMYGYYFLMAVRVRPSWLKPQFITLMQISQMVVGVATAA--FYIMKIRAGEECAVDQDLLVACGVMYSTYLYLFCEFAVRRFILGPKKETAPGKAGVSKM 319
BLAST of NO01G05250 vs. NCBI_GenBank
Match: XP_009841925.1 (hypothetical protein H257_15499 [Aphanomyces astaci] >ETV68496.1 hypothetical protein H257_15499 [Aphanomyces astaci]) HSP 1 Score: 242.3 bits (617), Expect = 2.100e-60 Identity = 124/266 (46.62%), Postives = 162/266 (60.90%), Query Frame = 0 Query: 36 LFQHYPVLDPLYT-QYEKNFYASTYVKFAQDTWPVLPLALCGMYALMIIVGTKVMVSRPKHEWKTALACWNLMLSIFSFCGMIRTVPHLLHNVATLPFKDTICRHPAETYGEGACGMWVMLFIFSKVPELVDTVFIVFRKSKLQFLHWYHHITVLLFCWHSYAVTSSTGLYFVAMNYSVHAIMYAYYYLTAINAWPKWIPPSIITVAQISQMIVGVGICASS----FYFLYTDPEHCQVKRQNVYAGALMYGSYLYLFCDFFVRRF 297 L + YP L LY +E F + +F + T L +ALC Y G ++M SR + LA WNL LS FS CG +RTVP LLH++ ++C YG G G+WV +FIFSK+PEL DT F+V RK L+FLHWYHHITVLLFCWH+Y+V SS+GLYFVAMNY+VHA+MY YY+LTA+ P+W ++T Q+SQM+VGV +CA+S C R N+ G +MY SY LF FF++R+ Sbjct: 16 LHEQYPRLAVLYPFAFENTFMLTWEAQFCRSTMH-LCVALCAAYCFSCYFGKQIMRSREAFDMTPVLALWNLSLSTFSACGALRTVPFLLHSIYHHGVYHSVCSDATAHYGNGPVGLWVSMFIFSKIPELFDTFFVVIRKKPLRFLHWYHHITVLLFCWHAYSVRSSSGLYFVAMNYTVHAVMYMYYFLTAVGYRPRW--AYLVTTLQLSQMVVGVAVCAASXXXXXXXXXXXXXXCHANRTNLQYGIVMYASYFALFLHFFIQRY 278
BLAST of NO01G05250 vs. NCBI_GenBank
Match: OQR86310.1 (elongation of very long chain fatty acids protein [Achlya hypogyna]) HSP 1 Score: 242.3 bits (617), Expect = 2.100e-60 Identity = 128/268 (47.76%), Postives = 169/268 (63.06%), Query Frame = 0 Query: 36 LFQHYPVLDPLYT-QYEKNFYASTYVKFAQDTWPVLPLALCGMYALMIIVGTKVMVSRPKHEWKTALACWNLMLSIFSFCGMIRTVPHLLHNVATLPFKDTICRHPAETYGEGACGMWVMLFIFSKVPELVDTVFIVFRKSKLQFLHWYHHITVLLFCWHSYAVTSSTGLYFVAMNYSVHAIMYAYYYLTAINAWPKWIPPSIITVAQISQMIVGVGICASSFYFLYTDPEHCQVKRQNVYAGALMYGSYLYLFCDFFVRR-FLRGGK 302 L + YP L LY ++E ++ + F +DT P + + LC +Y ++ + G +VM SR ++ALA WNL L++FS G IRTVP LL+ +A + +C YG G WV LFIFSK+PELVDT+FIV RK L FLHWYHHITVL+FCWH+YA S +GL+FVAMNY+VH +MY YY+L AI W +TV Q+ QM+VGV +CAS Y+L + CQ+ R N+ G LMY SY LF FF+ R F +G K Sbjct: 9 LHEEYPALSFLYPFEWENQWFFTWEHGFCKDTMPHV-VVLCAIYCVLCLGGREVMRSRQAFGLQSALALWNLGLAVFSIMGAIRTVPFLLNTLAVRGWHHAVCADAMPHYGHGPVSFWVTLFIFSKIPELVDTMFIVLRKKPLIFLHWYHHITVLMFCWHAYANLSPSGLFFVAMNYTVHGVMYFYYFLAAIGIRASW--AKFVTVIQLLQMVVGVAVCASGVYYLKSGVS-CQLDRDNLKWGILMYSSYFALFLKFFLERYFFKGNK 272 The following BLAST results are available for this feature:
BLAST of NO01G05250 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G05250 ID=NO01G05250|Name=NO01G05250|organism=Nannochloropsis oceanica|type=gene|length=2514bpback to top protein sequence of NO01G05250.1 >NO01G05250.1-protein ID=NO01G05250.1-protein|Name=NO01G05250.1|organism=Nannochloropsis oceanica|type=polypeptide|length=322bpback to top Synonyms
Publications
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