NO01G05250, NO01G05250 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G05250 vs. NCBI_GenBank
Match: ACV21066.1 (fatty acid elongase [Nannochloropsis oculata]) HSP 1 Score: 667.9 bits (1722), Expect = 1.600e-188 Identity = 320/321 (99.69%), Postives = 321/321 (100.00%), Query Frame = 0 Query: 1 MPKLPEISNIFKFLKADPSKIVPYKSIPDKVPFTQLFQHYPVLDPLYTQYEKNFYASTYVKFAQDTWPVLPLALCGMYALMIIVGTKVMVSRPKHEWKTALACWNLMLSIFSFCGMIRTVPHLLHNVATLPFKDTICRHPAETYGEGACGMWVMLFIFSKVPELVDTVFIVFRKSKLQFLHWYHHITVLLFCWHSYAVTSSTGLYFVAMNYSVHAIMYAYYYLTAINAWPKWIPPSIITVAQISQMIVGVGICASSFYFLYTDPEHCQVKRQNVYAGALMYGSYLYLFCDFFVRRFLRGGKPRLGEEKSAVLTMAKKIKAM 322 MPKLP+ISNIFKFLKADPSKIVPYKSIPDKVPFTQLFQHYPVLDPLYTQYEKNFYASTYVKFAQDTWPVLPLALCGMYALMIIVGTKVMVSRPKHEWKTALACWNLMLSIFSFCGMIRTVPHLLHNVATLPFKDTICRHPAETYGEGACGMWVMLFIFSKVPELVDTVFIVFRKSKLQFLHWYHHITVLLFCWHSYAVTSSTGLYFVAMNYSVHAIMYAYYYLTAINAWPKWIPPSIITVAQISQMIVGVGICASSFYFLYTDPEHCQVKRQNVYAGALMYGSYLYLFCDFFVRRFLRGGKPRLGEEKSAVLTMAKKIKAM Sbjct: 1 MPKLPKISNIFKFLKADPSKIVPYKSIPDKVPFTQLFQHYPVLDPLYTQYEKNFYASTYVKFAQDTWPVLPLALCGMYALMIIVGTKVMVSRPKHEWKTALACWNLMLSIFSFCGMIRTVPHLLHNVATLPFKDTICRHPAETYGEGACGMWVMLFIFSKVPELVDTVFIVFRKSKLQFLHWYHHITVLLFCWHSYAVTSSTGLYFVAMNYSVHAIMYAYYYLTAINAWPKWIPPSIITVAQISQMIVGVGICASSFYFLYTDPEHCQVKRQNVYAGALMYGSYLYLFCDFFVRRFLRGGKPRLGEEKSAVLTMAKKIKAM 321
BLAST of NO01G05250 vs. NCBI_GenBank
Match: EWM29442.1 (fatty-acyl [Nannochloropsis gaditana]) HSP 1 Score: 581.6 bits (1498), Expect = 1.500e-162 Identity = 267/308 (86.69%), Postives = 289/308 (93.83%), Query Frame = 0 Query: 12 KFLKADPSKIVPYKSIPDKVPFTQLFQHYPVLDPLYTQYEKNFYASTYVKFAQDTWPVLPLALCGMYALMIIVGTKVMVSRPKHEWKTALACWNLMLSIFSFCGMIRTVPHLLHNVATLPFKDTICRHPAETYGEGACGMWVMLFIFSKVPELVDTVFIVFRKSKLQFLHWYHHITVLLFCWHSYAVTSSTGLYFVAMNYSVHAIMYAYYYLTAINAWPKWIPPSIITVAQISQMIVGVGICASSFYFLYTDPEHCQVKRQNVYAGALMYGSYLYLFCDFFVRRFLRGGKPRLGEEKSAVLTMAKKIK 320 K + KI+PY+S+PD VPFTQLFQHYPVL P YT+YEKNF+AS+YV FAQ+TWP LPLALCG+Y LMI+VGTKVM SRPKHEWKTALACWNL+LS+FSFCGM+RTVPHLLHNV TLPFKDTICRHPAETYGEGACG+WVMLFI+SKVPELVDTVFIVFRKSKLQFLHWYHHITVLLFCWHSYAVTSSTGLYFVAMNYSVHA+MYAYYYLTAI AWP WIPPSIITVAQISQM+VGVGIC +SFY+LYTDPEHC+VK QNVY+GALMYGSYLYLFCDFFVRRFLRGGKPRLGEE+SAVLTM KKIK Sbjct: 10 KLFWGEMPKIIPYRSVPDNVPFTQLFQHYPVLSPFYTEYEKNFHASSYVNFAQNTWPALPLALCGIYGLMIVVGTKVMESRPKHEWKTALACWNLLLSVFSFCGMLRTVPHLLHNVTTLPFKDTICRHPAETYGEGACGLWVMLFIYSKVPELVDTVFIVFRKSKLQFLHWYHHITVLLFCWHSYAVTSSTGLYFVAMNYSVHAVMYAYYYLTAIKAWPSWIPPSIITVAQISQMMVGVGICVASFYYLYTDPEHCEVKPQNVYSGALMYGSYLYLFCDFFVRRFLRGGKPRLGEERSAVLTMTKKIK 317
BLAST of NO01G05250 vs. NCBI_GenBank
Match: XP_005855601.1 (fatty-acyl [Nannochloropsis gaditana CCMP526] >EKU20764.1 fatty-acyl [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 580.5 bits (1495), Expect = 3.300e-162 Identity = 267/310 (86.13%), Postives = 290/310 (93.55%), Query Frame = 0 Query: 12 KFLKADPSKIVPYKSIPDKVPFTQLFQHYPVLDPLYTQYEKNFYASTYVKFAQDTWPVLPLALCGMYALMIIVGTKVMVSRPKHEWKTALACWNLMLSIFSFCGMIRTVPHLLHNVATLPFKDTICRHPAETYGEGACGMWVMLFIFSKVPELVDTVFIVFRKSKLQFLHWYHHITVLLFCWHSYAVTSSTGLYFVAMNYSVHAIMYAYYYLTAINAWPKWIPPSIITVAQISQMIVGVGICASSFYFLYTDPEHCQVKRQNVYAGALMYGSYLYLFCDFFVRRFLRGGKPRLGEEKSAVLTMAKKIKAM 322 K + + KI+PY+S+PD VPFTQLFQHYPVL P YT+YEKNF+AS+YV FAQ+TWP LPLALCG+Y LMI+VGTKVM SRPKHEWKTALACWNL+LS+FSFCGM+RTVPHLL NV TLPFKDTICRHPAETYGEGACG+WVMLFI+SKVPELVDTVFIVFRKSKLQFLHWYHHITVLLFCWHSYAVTSSTGLYFVAMNYSVHA+MYAYYYLTAI AWP WIPPSIITVAQISQM+VGVGIC +SFY+LYTDPEHC+VK QNVY+GALMYGSYLYLFCDFFVRRFLRGGKPRLGEE+SAVLTM KKIK M Sbjct: 10 KLIWGEMPKIIPYRSVPDNVPFTQLFQHYPVLSPFYTEYEKNFHASSYVNFAQNTWPALPLALCGIYGLMIVVGTKVMESRPKHEWKTALACWNLLLSVFSFCGMLRTVPHLLQNVTTLPFKDTICRHPAETYGEGACGLWVMLFIYSKVPELVDTVFIVFRKSKLQFLHWYHHITVLLFCWHSYAVTSSTGLYFVAMNYSVHAVMYAYYYLTAIKAWPSWIPPSIITVAQISQMMVGVGICVASFYYLYTDPEHCEVKPQNVYSGALMYGSYLYLFCDFFVRRFLRGGKPRLGEERSAVLTMTKKIKDM 319
BLAST of NO01G05250 vs. NCBI_GenBank
Match: XP_005854181.1 (fatty-acyl [Nannochloropsis gaditana CCMP526] >EKU22182.1 fatty-acyl [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 466.5 bits (1199), Expect = 6.900e-128 Identity = 223/310 (71.94%), Postives = 245/310 (79.03%), Query Frame = 0 Query: 12 KFLKADPSKIVPYKSIPDKVPFTQLFQHYPVLDPLYTQYEKNFYASTYVKFAQDTWPVLPLALCGMYALMIIVGTKVMVSRPKHEWKTALACWNLMLSIFSFCGMIRTVPHLLHNVATLPFKDTICRHPAETYGEGACGMWVMLFIFSKVPELVDTVFIVFRKSKLQFLHWYHHITVLLFCWHSYAVTSSTGLYFVAMNYSVHAIMYAYYYLTAINAWPKWIPPSIITVAQISQMIVGVGICASSFYFLYTDPEHCQVKRQNVYAGALMYGSYLYLFCDFFVRRFLRGGKPRLGEEKSAVLTMAKKIKAM 322 K + + KI+PY+S+PD VPFTQLFQHYPVL P YT+YEKNF+AS+YV FAQ+TWP LPLALCG+Y LMI+VGTKVM SRPKHEWKTALACWNL+LS+FSFCGM+RTVPHLL NV TLPFKDTICRHPAETYGEGACG+WVMLFI+SKVPELVDTVFIVFRKSKLQ TAI AWP WIPPSIITVAQISQM+VGVGIC +SFY+LYTDPEHC+VK QNVY+GALMYGSYLYLFCDFFVRRFLRGGKPRLGEE+SAVLTM KKIK M Sbjct: 10 KLIWGEMPKIIPYRSVPDNVPFTQLFQHYPVLSPFYTEYEKNFHASSYVNFAQNTWPALPLALCGIYGLMIVVGTKVMESRPKHEWKTALACWNLLLSVFSFCGMLRTVPHLLQNVTTLPFKDTICRHPAETYGEGACGLWVMLFIYSKVPELVDTVFIVFRKSKLQ---------------------------------------------TAIKAWPSWIPPSIITVAQISQMMVGVGICVASFYYLYTDPEHCEVKPQNVYSGALMYGSYLYLFCDFFVRRFLRGGKPRLGEERSAVLTMTKKIKDM 274
BLAST of NO01G05250 vs. NCBI_GenBank
Match: EWM21280.1 (fatty-acyl, partial [Nannochloropsis gaditana]) HSP 1 Score: 300.8 bits (769), Expect = 5.000e-78 Identity = 137/203 (67.49%), Postives = 167/203 (82.27%), Query Frame = 0 Query: 14 LKADPSKIVPYKSIPDKVPFTQLFQHYPVLDPLYTQYEKNFYASTYVKFAQDTWPVLPLALCGMYALMIIVGTKVMVSRPKHEWKTALACWNLMLSIFSFCGMIRTVPHLLHNVATLPFKDTICRHPAETYGEGACGMWVMLFIFSKVPELVDTVFIVFRKSKLQFLHWYHHITVLLFCWHSYAVTSSTGLYFVAMNYSVHAI 217 ++ +I PY S + +TQLFQH+P+L+ Y +EKNF+A +V FA+ TWP LPLALC +YALMI+VG++VM +R + +W+ LA WNL LS+FSFCGM+RTVPHLL+N+ TL F++T+C A+ YGEGACG+WVMLFIFSK+PELVDTVFIVFRKSKLQFLHWYHHITVLLFCWHSYA SSTGLYFVAMNYSVHAI Sbjct: 5 IRTPADQIKPYFSEAAQTHYTQLFQHFPILERTYFPFEKNFHAEPFVNFAKATWPALPLALCTLYALMIVVGSRVMKNRERFDWRGPLAYWNLCLSLFSFCGMLRTVPHLLNNITTLSFRETVCTSAAKAYGEGACGLWVMLFIFSKIPELVDTVFIVFRKSKLQFLHWYHHITVLLFCWHSYATESSTGLYFVAMNYSVHAI 207
BLAST of NO01G05250 vs. NCBI_GenBank
Match: GAX19603.1 (elongation of very long chain fatty acids protein 6 [Fistulifera solaris]) HSP 1 Score: 282.0 bits (720), Expect = 2.400e-72 Identity = 137/268 (51.12%), Postives = 170/268 (63.43%), Query Frame = 0 Query: 29 DKVPFTQLFQHYPVLDPLYTQYEKNFYASTYVKFAQDTWPVLPLALCGMYALMIIVGTKVMVSRPKHEWKTALACWNLMLSIFSFCGMIRTVPHLLHNVATLPFKDTICRHPAETYGEGACGMWVMLFIFSKVPELVDTVFIVFRKSKLQFLHWYHHITVLLFCWHSYAVTSSTGLYFVAMNYSVHAIMYAYYYLTAINAWPKWIPPSIITVAQISQMIVGVGICASSFYFLYTDPEHCQVKRQNVYAGALMYGSYLYLFCDFFVRRF 297 D + + + YP ++ LYT +EK FY + P +P+A C +YA+ I G R + W+ LA WNL LS+FSF GM+RT PHL HN+ L F+D +C P TYG G+ G+WV LFI SK PEL+DT FIV K L FLHWYHHITVLL+CWHSY TS TG+ F AMNY+VHA MY YY+L A+ PKW P +IT QISQM+VGV S+Y+ TD E C + R N A LMYGSYL+LFC FF R+ Sbjct: 12 DNLEYREFSCLYPQVEHLYTSFEK-FYDPIPLLNWMKGQPGIPVAACIIYAVSIYYGQAYFAKRDRWNWRNTLAVWNLFLSVFSFVGMLRTAPHLFHNLTHLSFRDNMCLDPRTTYGSGSTGLWVQLFILSKFPELIDTFFIVIHKKPLIFLHWYHHITVLLYCWHSYVTTSPTGIIFTAMNYTVHATMYGYYFLMALRMKPKWFNPMVITAMQISQMVVGVATTIVSYYYFLTDAE-CALDRGNNIAAFLMYGSYLFLFCQFFFSRY 277
BLAST of NO01G05250 vs. NCBI_GenBank
Match: GAX09713.1 (elongation of very long chain fatty acids protein 6 [Fistulifera solaris]) HSP 1 Score: 272.3 bits (695), Expect = 1.900e-69 Identity = 127/229 (55.46%), Postives = 153/229 (66.81%), Query Frame = 0 Query: 68 PVLPLALCGMYALMIIVGTKVMVSRPKHEWKTALACWNLMLSIFSFCGMIRTVPHLLHNVATLPFKDTICRHPAETYGEGACGMWVMLFIFSKVPELVDTVFIVFRKSKLQFLHWYHHITVLLFCWHSYAVTSSTGLYFVAMNYSVHAIMYAYYYLTAINAWPKWIPPSIITVAQISQMIVGVGICASSFYFLYTDPEHCQVKRQNVYAGALMYGSYLYLFCDFFVRRF 297 P +P+A C +YA+ I G R + W+ LA WNL LS+FSF GM+RT PHL HN+ L F+D +C P TYG G+ G+WV LFI SK PEL+DT FIV K L FLHWYHHITVLL+CWHSY TS TG+ F AMNY+VHA MY YY+L A+ PKW P +IT QISQM+VGV S+Y+ TD E C + R N A LMYGSYL+LFC FF R+ Sbjct: 42 PGIPVAACIIYAVSIYYGQAYFAKRDRWNWRYTLAVWNLFLSVFSFVGMLRTAPHLFHNLTHLSFRDNMCLDPRTTYGSGSTGLWVQLFILSKFPELIDTFFIVIHKKPLIFLHWYHHITVLLYCWHSYVTTSPTGIIFTAMNYTVHATMYGYYFLMALRMKPKWFNPMVITAMQISQMVVGVATTIVSYYYFLTDAE-CALDRGNNIAAFLMYGSYLFLFCQFFFSRY 269
BLAST of NO01G05250 vs. NCBI_GenBank
Match: XP_002293395.1 (long chain fatty acid elongase [Thalassiosira pseudonana CCMP1335] >EED89131.1 long chain fatty acid elongase [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 268.5 bits (685), Expect = 2.700e-68 Identity = 130/290 (44.83%), Postives = 182/290 (62.76%), Query Frame = 0 Query: 12 KFLKADPSKIVPYKSIPDKVPFTQLFQHYPVLDPLYTQYEKNFYASTYVKFAQDTWPVLPLALCGMYALMIIVGTKVMVSRPKHEWKTALACWNLMLSIFSFCGMIRTVPHLLHNVATLPFKDTICRHPAETYGEGACGMWVMLFIFSKVPELVDTVFIVFRKSKLQFLHWYHHITVLLFCWHSYAVTSSTGLYFVAMNYSVHAIMYAYYYLTAINAWPKWIPPSIITVAQISQMIVGVGICASSFYFLYTDP---EHCQVKRQNVYAGALMYGSYLYLFCDFFVRRFLR 299 +FL + P + V + V + + +P+L Y +E+ + + + QD P++P+ C Y ++I++G M RP W+ LA WNL LS+FS+ G IRT P L +N+ T +D +C PA YG G+ G+WV LFI SK PEL+DT FIV K L FLHWYHHITVLL+CWHSY TS +GL+FV MNYSVHA+MY YY+L A+ PKW P +T Q+SQM +GVG+ +FY+ Y++P + C ++++N A +MYGSY YLF FFV R+ + Sbjct: 3 QFLTSIPKECVGTNGL--GVHYAEFSCLHPLLGATYLPFERFYDPVATLTWMQDR-PMIPIIACVAYVVLIVLGRAYMKDRPAWSWRRILAVWNLSLSLFSWIGAIRTAPQLYYNLTTYSLRDNLCDDPAALYGSGSTGLWVQLFILSKFPELLDTFFIVIHKKPLIFLHWYHHITVLLYCWHSYVTTSPSGLFFVVMNYSVHAVMYGYYFLMAVKFRPKWFNPMFVTFMQLSQMFIGVGVTIVAFYY-YSNPILGKTCHIRKENNVAAFVMYGSYFYLFAQFFVARYYK 288
BLAST of NO01G05250 vs. NCBI_GenBank
Match: XP_002184740.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC43799.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 266.9 bits (681), Expect = 8.000e-68 Identity = 123/245 (50.20%), Postives = 169/245 (68.98%), Query Frame = 0 Query: 68 PVLPLALCGMYALMIIVGTKVMVSRPKHEWKTALACWNLMLSIFSFCGMIRTVPHLLHNVATLPFKDTICRHPAETYGEGACGMWVMLFIFSKVPELVDTVFIVFRKSKLQFLHWYHHITVLLFCWHSYAVTSSTGLYFVAMNYSVHAIMYAYYYLTAINAWPKWIPPSIITVAQISQMIVGVGICASSFYFLYTDPEH--CQVKRQNVYAGALMYGSYLYLFCDFFVRRFLRGGKPRLGEEKSA 311 P++P+ C +Y L+++ G +R +T+LA WNL L++FS GM+RT P L+HN+ATL ++ +C +P TYG G+ G+WV LFI SK PEL+DTVFI+ K KL FLHWYHHITVLL+CWHSY S G++FV MNY+VHA MY YY+L AI A P+W+ P I+T QISQM+VGV + FY+ +H C++KR+N A +MYGSYL+LF FFV R++ G + + +K+A Sbjct: 5 PLVPIGACLLYGLLMVAGQAYFRTREPLRARTSLAAWNLFLALFSLVGMLRTFPQLVHNLATLTLRENLCANPQATYGSGSTGLWVQLFILSKFPELIDTVFIIVNKKKLIFLHWYHHITVLLYCWHSYVTKSPPGIFFVVMNYTVHASMYGYYFLMAIRARPRWLNPMIVTTMQISQMVVGVAVTLLGFYYSARAADHQSCRIKRENNTAAFVMYGSYLFLFLQFFVGRYV-GTQSPVASKKTA 248
BLAST of NO01G05250 vs. NCBI_GenBank
Match: OQR86335.1 (elongation of very long chain fatty acids protein [Achlya hypogyna]) HSP 1 Score: 263.1 bits (671), Expect = 1.200e-66 Identity = 133/268 (49.63%), Postives = 175/268 (65.30%), Query Frame = 0 Query: 30 KVPFTQLFQHYPVLDPLYT-QYEKNFYASTYVKFAQDTWPVLPLALCGMYALMIIVGTKVMVSRPKHEWKTALACWNLMLSIFSFCGMIRTVPHLLHNVATLPFKDTICRHPAETYGEGACGMWVMLFIFSKVPELVDTVFIVFRKSKLQFLHWYHHITVLLFCWHSYAVTSSTGLYFVAMNYSVHAIMYAYYYLTAINAWPKWIPPSIITVAQISQMIVGVGICASSFYFLYTDPEHCQVKRQNVYAGALMYGSYLYLFCDFFVRRF 297 + PF L + YP L PLY +E +F S F D+ + LC +Y ++ G M +R ++ KTALA WNL+L+ FSFCG +RTVP LL ++ + +IC + YG G G+WV LFIFSKVPELVDT FIV RK L FLHWYHHITVL+FCWH++AV S++GLYFVAMNYSVHAIMY YY+LTA+ P+W ++T Q+SQM+VGV +C S ++++ + C V N+ G LMY SYL LF FF+ R+ Sbjct: 2 RAPF--LHEAYPALAPLYPFAFENDFVLSWQPSFCADSMQA-AIGLCALYCVLCYAGRHWMATRAPYDLKTALAGWNLLLATFSFCGAVRTVPFLLDSIYQRGWYQSICSEATDHYGNGPTGLWVALFIFSKVPELVDTFFIVVRKKPLIFLHWYHHITVLMFCWHAFAVRSASGLYFVAMNYSVHAIMYFYYFLTAVGYRPRW--ALMVTAVQLSQMVVGVAVCTMSVFYIHRG-DSCHVDHANLKWGILMYSSYLVLFLKFFIERY 263 The following BLAST results are available for this feature:
BLAST of NO01G05250 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G05250 ID=NO01G05250|Name=NO01G05250|organism=Nannochloropsis oceanica|type=gene|length=2514bpback to top protein sequence of NO01G05250.1 >NO01G05250.1-protein ID=NO01G05250.1-protein|Name=NO01G05250.1|organism=Nannochloropsis oceanica|type=polypeptide|length=322bpback to top Synonyms
Publications
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