NO01G05250, NO01G05250 (gene) Nannochloropsis oceanica

Overview
NameNO01G05250
Unique NameNO01G05250
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2514
Alignment locationchr1:1400376..1402889 -

Link to JBrowse

Properties
Property NameValue
DescriptionElongation of fatty acids protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:1400376..1402889 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR002076ELO_fam
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0009058biosynthetic process
GO:0006629lipid metabolic process
Homology
BLAST of NO01G05250 vs. NCBI_GenBank
Match: ACV21066.1 (fatty acid elongase [Nannochloropsis oculata])

HSP 1 Score: 667.9 bits (1722), Expect = 1.600e-188
Identity = 320/321 (99.69%), Postives = 321/321 (100.00%), Query Frame = 0
Query:    1 MPKLPEISNIFKFLKADPSKIVPYKSIPDKVPFTQLFQHYPVLDPLYTQYEKNFYASTYVKFAQDTWPVLPLALCGMYALMIIVGTKVMVSRPKHEWKTALACWNLMLSIFSFCGMIRTVPHLLHNVATLPFKDTICRHPAETYGEGACGMWVMLFIFSKVPELVDTVFIVFRKSKLQFLHWYHHITVLLFCWHSYAVTSSTGLYFVAMNYSVHAIMYAYYYLTAINAWPKWIPPSIITVAQISQMIVGVGICASSFYFLYTDPEHCQVKRQNVYAGALMYGSYLYLFCDFFVRRFLRGGKPRLGEEKSAVLTMAKKIKAM 322
            MPKLP+ISNIFKFLKADPSKIVPYKSIPDKVPFTQLFQHYPVLDPLYTQYEKNFYASTYVKFAQDTWPVLPLALCGMYALMIIVGTKVMVSRPKHEWKTALACWNLMLSIFSFCGMIRTVPHLLHNVATLPFKDTICRHPAETYGEGACGMWVMLFIFSKVPELVDTVFIVFRKSKLQFLHWYHHITVLLFCWHSYAVTSSTGLYFVAMNYSVHAIMYAYYYLTAINAWPKWIPPSIITVAQISQMIVGVGICASSFYFLYTDPEHCQVKRQNVYAGALMYGSYLYLFCDFFVRRFLRGGKPRLGEEKSAVLTMAKKIKAM
Sbjct:    1 MPKLPKISNIFKFLKADPSKIVPYKSIPDKVPFTQLFQHYPVLDPLYTQYEKNFYASTYVKFAQDTWPVLPLALCGMYALMIIVGTKVMVSRPKHEWKTALACWNLMLSIFSFCGMIRTVPHLLHNVATLPFKDTICRHPAETYGEGACGMWVMLFIFSKVPELVDTVFIVFRKSKLQFLHWYHHITVLLFCWHSYAVTSSTGLYFVAMNYSVHAIMYAYYYLTAINAWPKWIPPSIITVAQISQMIVGVGICASSFYFLYTDPEHCQVKRQNVYAGALMYGSYLYLFCDFFVRRFLRGGKPRLGEEKSAVLTMAKKIKAM 321          
BLAST of NO01G05250 vs. NCBI_GenBank
Match: EWM29442.1 (fatty-acyl [Nannochloropsis gaditana])

HSP 1 Score: 581.6 bits (1498), Expect = 1.500e-162
Identity = 267/308 (86.69%), Postives = 289/308 (93.83%), Query Frame = 0
Query:   12 KFLKADPSKIVPYKSIPDKVPFTQLFQHYPVLDPLYTQYEKNFYASTYVKFAQDTWPVLPLALCGMYALMIIVGTKVMVSRPKHEWKTALACWNLMLSIFSFCGMIRTVPHLLHNVATLPFKDTICRHPAETYGEGACGMWVMLFIFSKVPELVDTVFIVFRKSKLQFLHWYHHITVLLFCWHSYAVTSSTGLYFVAMNYSVHAIMYAYYYLTAINAWPKWIPPSIITVAQISQMIVGVGICASSFYFLYTDPEHCQVKRQNVYAGALMYGSYLYLFCDFFVRRFLRGGKPRLGEEKSAVLTMAKKIK 320
            K    +  KI+PY+S+PD VPFTQLFQHYPVL P YT+YEKNF+AS+YV FAQ+TWP LPLALCG+Y LMI+VGTKVM SRPKHEWKTALACWNL+LS+FSFCGM+RTVPHLLHNV TLPFKDTICRHPAETYGEGACG+WVMLFI+SKVPELVDTVFIVFRKSKLQFLHWYHHITVLLFCWHSYAVTSSTGLYFVAMNYSVHA+MYAYYYLTAI AWP WIPPSIITVAQISQM+VGVGIC +SFY+LYTDPEHC+VK QNVY+GALMYGSYLYLFCDFFVRRFLRGGKPRLGEE+SAVLTM KKIK
Sbjct:   10 KLFWGEMPKIIPYRSVPDNVPFTQLFQHYPVLSPFYTEYEKNFHASSYVNFAQNTWPALPLALCGIYGLMIVVGTKVMESRPKHEWKTALACWNLLLSVFSFCGMLRTVPHLLHNVTTLPFKDTICRHPAETYGEGACGLWVMLFIYSKVPELVDTVFIVFRKSKLQFLHWYHHITVLLFCWHSYAVTSSTGLYFVAMNYSVHAVMYAYYYLTAIKAWPSWIPPSIITVAQISQMMVGVGICVASFYYLYTDPEHCEVKPQNVYSGALMYGSYLYLFCDFFVRRFLRGGKPRLGEERSAVLTMTKKIK 317          
BLAST of NO01G05250 vs. NCBI_GenBank
Match: XP_005855601.1 (fatty-acyl [Nannochloropsis gaditana CCMP526] >EKU20764.1 fatty-acyl [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 580.5 bits (1495), Expect = 3.300e-162
Identity = 267/310 (86.13%), Postives = 290/310 (93.55%), Query Frame = 0
Query:   12 KFLKADPSKIVPYKSIPDKVPFTQLFQHYPVLDPLYTQYEKNFYASTYVKFAQDTWPVLPLALCGMYALMIIVGTKVMVSRPKHEWKTALACWNLMLSIFSFCGMIRTVPHLLHNVATLPFKDTICRHPAETYGEGACGMWVMLFIFSKVPELVDTVFIVFRKSKLQFLHWYHHITVLLFCWHSYAVTSSTGLYFVAMNYSVHAIMYAYYYLTAINAWPKWIPPSIITVAQISQMIVGVGICASSFYFLYTDPEHCQVKRQNVYAGALMYGSYLYLFCDFFVRRFLRGGKPRLGEEKSAVLTMAKKIKAM 322
            K +  +  KI+PY+S+PD VPFTQLFQHYPVL P YT+YEKNF+AS+YV FAQ+TWP LPLALCG+Y LMI+VGTKVM SRPKHEWKTALACWNL+LS+FSFCGM+RTVPHLL NV TLPFKDTICRHPAETYGEGACG+WVMLFI+SKVPELVDTVFIVFRKSKLQFLHWYHHITVLLFCWHSYAVTSSTGLYFVAMNYSVHA+MYAYYYLTAI AWP WIPPSIITVAQISQM+VGVGIC +SFY+LYTDPEHC+VK QNVY+GALMYGSYLYLFCDFFVRRFLRGGKPRLGEE+SAVLTM KKIK M
Sbjct:   10 KLIWGEMPKIIPYRSVPDNVPFTQLFQHYPVLSPFYTEYEKNFHASSYVNFAQNTWPALPLALCGIYGLMIVVGTKVMESRPKHEWKTALACWNLLLSVFSFCGMLRTVPHLLQNVTTLPFKDTICRHPAETYGEGACGLWVMLFIYSKVPELVDTVFIVFRKSKLQFLHWYHHITVLLFCWHSYAVTSSTGLYFVAMNYSVHAVMYAYYYLTAIKAWPSWIPPSIITVAQISQMMVGVGICVASFYYLYTDPEHCEVKPQNVYSGALMYGSYLYLFCDFFVRRFLRGGKPRLGEERSAVLTMTKKIKDM 319          
BLAST of NO01G05250 vs. NCBI_GenBank
Match: XP_005854181.1 (fatty-acyl [Nannochloropsis gaditana CCMP526] >EKU22182.1 fatty-acyl [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 466.5 bits (1199), Expect = 6.900e-128
Identity = 223/310 (71.94%), Postives = 245/310 (79.03%), Query Frame = 0
Query:   12 KFLKADPSKIVPYKSIPDKVPFTQLFQHYPVLDPLYTQYEKNFYASTYVKFAQDTWPVLPLALCGMYALMIIVGTKVMVSRPKHEWKTALACWNLMLSIFSFCGMIRTVPHLLHNVATLPFKDTICRHPAETYGEGACGMWVMLFIFSKVPELVDTVFIVFRKSKLQFLHWYHHITVLLFCWHSYAVTSSTGLYFVAMNYSVHAIMYAYYYLTAINAWPKWIPPSIITVAQISQMIVGVGICASSFYFLYTDPEHCQVKRQNVYAGALMYGSYLYLFCDFFVRRFLRGGKPRLGEEKSAVLTMAKKIKAM 322
            K +  +  KI+PY+S+PD VPFTQLFQHYPVL P YT+YEKNF+AS+YV FAQ+TWP LPLALCG+Y LMI+VGTKVM SRPKHEWKTALACWNL+LS+FSFCGM+RTVPHLL NV TLPFKDTICRHPAETYGEGACG+WVMLFI+SKVPELVDTVFIVFRKSKLQ                                             TAI AWP WIPPSIITVAQISQM+VGVGIC +SFY+LYTDPEHC+VK QNVY+GALMYGSYLYLFCDFFVRRFLRGGKPRLGEE+SAVLTM KKIK M
Sbjct:   10 KLIWGEMPKIIPYRSVPDNVPFTQLFQHYPVLSPFYTEYEKNFHASSYVNFAQNTWPALPLALCGIYGLMIVVGTKVMESRPKHEWKTALACWNLLLSVFSFCGMLRTVPHLLQNVTTLPFKDTICRHPAETYGEGACGLWVMLFIYSKVPELVDTVFIVFRKSKLQ---------------------------------------------TAIKAWPSWIPPSIITVAQISQMMVGVGICVASFYYLYTDPEHCEVKPQNVYSGALMYGSYLYLFCDFFVRRFLRGGKPRLGEERSAVLTMTKKIKDM 274          
BLAST of NO01G05250 vs. NCBI_GenBank
Match: EWM21280.1 (fatty-acyl, partial [Nannochloropsis gaditana])

HSP 1 Score: 300.8 bits (769), Expect = 5.000e-78
Identity = 137/203 (67.49%), Postives = 167/203 (82.27%), Query Frame = 0
Query:   14 LKADPSKIVPYKSIPDKVPFTQLFQHYPVLDPLYTQYEKNFYASTYVKFAQDTWPVLPLALCGMYALMIIVGTKVMVSRPKHEWKTALACWNLMLSIFSFCGMIRTVPHLLHNVATLPFKDTICRHPAETYGEGACGMWVMLFIFSKVPELVDTVFIVFRKSKLQFLHWYHHITVLLFCWHSYAVTSSTGLYFVAMNYSVHAI 217
            ++    +I PY S   +  +TQLFQH+P+L+  Y  +EKNF+A  +V FA+ TWP LPLALC +YALMI+VG++VM +R + +W+  LA WNL LS+FSFCGM+RTVPHLL+N+ TL F++T+C   A+ YGEGACG+WVMLFIFSK+PELVDTVFIVFRKSKLQFLHWYHHITVLLFCWHSYA  SSTGLYFVAMNYSVHAI
Sbjct:    5 IRTPADQIKPYFSEAAQTHYTQLFQHFPILERTYFPFEKNFHAEPFVNFAKATWPALPLALCTLYALMIVVGSRVMKNRERFDWRGPLAYWNLCLSLFSFCGMLRTVPHLLNNITTLSFRETVCTSAAKAYGEGACGLWVMLFIFSKIPELVDTVFIVFRKSKLQFLHWYHHITVLLFCWHSYATESSTGLYFVAMNYSVHAI 207          
BLAST of NO01G05250 vs. NCBI_GenBank
Match: GAX19603.1 (elongation of very long chain fatty acids protein 6 [Fistulifera solaris])

HSP 1 Score: 282.0 bits (720), Expect = 2.400e-72
Identity = 137/268 (51.12%), Postives = 170/268 (63.43%), Query Frame = 0
Query:   29 DKVPFTQLFQHYPVLDPLYTQYEKNFYASTYVKFAQDTWPVLPLALCGMYALMIIVGTKVMVSRPKHEWKTALACWNLMLSIFSFCGMIRTVPHLLHNVATLPFKDTICRHPAETYGEGACGMWVMLFIFSKVPELVDTVFIVFRKSKLQFLHWYHHITVLLFCWHSYAVTSSTGLYFVAMNYSVHAIMYAYYYLTAINAWPKWIPPSIITVAQISQMIVGVGICASSFYFLYTDPEHCQVKRQNVYAGALMYGSYLYLFCDFFVRRF 297
            D + + +    YP ++ LYT +EK FY    +       P +P+A C +YA+ I  G      R +  W+  LA WNL LS+FSF GM+RT PHL HN+  L F+D +C  P  TYG G+ G+WV LFI SK PEL+DT FIV  K  L FLHWYHHITVLL+CWHSY  TS TG+ F AMNY+VHA MY YY+L A+   PKW  P +IT  QISQM+VGV     S+Y+  TD E C + R N  A  LMYGSYL+LFC FF  R+
Sbjct:   12 DNLEYREFSCLYPQVEHLYTSFEK-FYDPIPLLNWMKGQPGIPVAACIIYAVSIYYGQAYFAKRDRWNWRNTLAVWNLFLSVFSFVGMLRTAPHLFHNLTHLSFRDNMCLDPRTTYGSGSTGLWVQLFILSKFPELIDTFFIVIHKKPLIFLHWYHHITVLLYCWHSYVTTSPTGIIFTAMNYTVHATMYGYYFLMALRMKPKWFNPMVITAMQISQMVVGVATTIVSYYYFLTDAE-CALDRGNNIAAFLMYGSYLFLFCQFFFSRY 277          
BLAST of NO01G05250 vs. NCBI_GenBank
Match: GAX09713.1 (elongation of very long chain fatty acids protein 6 [Fistulifera solaris])

HSP 1 Score: 272.3 bits (695), Expect = 1.900e-69
Identity = 127/229 (55.46%), Postives = 153/229 (66.81%), Query Frame = 0
Query:   68 PVLPLALCGMYALMIIVGTKVMVSRPKHEWKTALACWNLMLSIFSFCGMIRTVPHLLHNVATLPFKDTICRHPAETYGEGACGMWVMLFIFSKVPELVDTVFIVFRKSKLQFLHWYHHITVLLFCWHSYAVTSSTGLYFVAMNYSVHAIMYAYYYLTAINAWPKWIPPSIITVAQISQMIVGVGICASSFYFLYTDPEHCQVKRQNVYAGALMYGSYLYLFCDFFVRRF 297
            P +P+A C +YA+ I  G      R +  W+  LA WNL LS+FSF GM+RT PHL HN+  L F+D +C  P  TYG G+ G+WV LFI SK PEL+DT FIV  K  L FLHWYHHITVLL+CWHSY  TS TG+ F AMNY+VHA MY YY+L A+   PKW  P +IT  QISQM+VGV     S+Y+  TD E C + R N  A  LMYGSYL+LFC FF  R+
Sbjct:   42 PGIPVAACIIYAVSIYYGQAYFAKRDRWNWRYTLAVWNLFLSVFSFVGMLRTAPHLFHNLTHLSFRDNMCLDPRTTYGSGSTGLWVQLFILSKFPELIDTFFIVIHKKPLIFLHWYHHITVLLYCWHSYVTTSPTGIIFTAMNYTVHATMYGYYFLMALRMKPKWFNPMVITAMQISQMVVGVATTIVSYYYFLTDAE-CALDRGNNIAAFLMYGSYLFLFCQFFFSRY 269          
BLAST of NO01G05250 vs. NCBI_GenBank
Match: XP_002293395.1 (long chain fatty acid elongase [Thalassiosira pseudonana CCMP1335] >EED89131.1 long chain fatty acid elongase [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 268.5 bits (685), Expect = 2.700e-68
Identity = 130/290 (44.83%), Postives = 182/290 (62.76%), Query Frame = 0
Query:   12 KFLKADPSKIVPYKSIPDKVPFTQLFQHYPVLDPLYTQYEKNFYASTYVKFAQDTWPVLPLALCGMYALMIIVGTKVMVSRPKHEWKTALACWNLMLSIFSFCGMIRTVPHLLHNVATLPFKDTICRHPAETYGEGACGMWVMLFIFSKVPELVDTVFIVFRKSKLQFLHWYHHITVLLFCWHSYAVTSSTGLYFVAMNYSVHAIMYAYYYLTAINAWPKWIPPSIITVAQISQMIVGVGICASSFYFLYTDP---EHCQVKRQNVYAGALMYGSYLYLFCDFFVRRFLR 299
            +FL + P + V    +   V + +    +P+L   Y  +E+ +     + + QD  P++P+  C  Y ++I++G   M  RP   W+  LA WNL LS+FS+ G IRT P L +N+ T   +D +C  PA  YG G+ G+WV LFI SK PEL+DT FIV  K  L FLHWYHHITVLL+CWHSY  TS +GL+FV MNYSVHA+MY YY+L A+   PKW  P  +T  Q+SQM +GVG+   +FY+ Y++P   + C ++++N  A  +MYGSY YLF  FFV R+ +
Sbjct:    3 QFLTSIPKECVGTNGL--GVHYAEFSCLHPLLGATYLPFERFYDPVATLTWMQDR-PMIPIIACVAYVVLIVLGRAYMKDRPAWSWRRILAVWNLSLSLFSWIGAIRTAPQLYYNLTTYSLRDNLCDDPAALYGSGSTGLWVQLFILSKFPELLDTFFIVIHKKPLIFLHWYHHITVLLYCWHSYVTTSPSGLFFVVMNYSVHAVMYGYYFLMAVKFRPKWFNPMFVTFMQLSQMFIGVGVTIVAFYY-YSNPILGKTCHIRKENNVAAFVMYGSYFYLFAQFFVARYYK 288          
BLAST of NO01G05250 vs. NCBI_GenBank
Match: XP_002184740.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC43799.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 266.9 bits (681), Expect = 8.000e-68
Identity = 123/245 (50.20%), Postives = 169/245 (68.98%), Query Frame = 0
Query:   68 PVLPLALCGMYALMIIVGTKVMVSRPKHEWKTALACWNLMLSIFSFCGMIRTVPHLLHNVATLPFKDTICRHPAETYGEGACGMWVMLFIFSKVPELVDTVFIVFRKSKLQFLHWYHHITVLLFCWHSYAVTSSTGLYFVAMNYSVHAIMYAYYYLTAINAWPKWIPPSIITVAQISQMIVGVGICASSFYFLYTDPEH--CQVKRQNVYAGALMYGSYLYLFCDFFVRRFLRGGKPRLGEEKSA 311
            P++P+  C +Y L+++ G     +R     +T+LA WNL L++FS  GM+RT P L+HN+ATL  ++ +C +P  TYG G+ G+WV LFI SK PEL+DTVFI+  K KL FLHWYHHITVLL+CWHSY   S  G++FV MNY+VHA MY YY+L AI A P+W+ P I+T  QISQM+VGV +    FY+     +H  C++KR+N  A  +MYGSYL+LF  FFV R++ G +  +  +K+A
Sbjct:    5 PLVPIGACLLYGLLMVAGQAYFRTREPLRARTSLAAWNLFLALFSLVGMLRTFPQLVHNLATLTLRENLCANPQATYGSGSTGLWVQLFILSKFPELIDTVFIIVNKKKLIFLHWYHHITVLLYCWHSYVTKSPPGIFFVVMNYTVHASMYGYYFLMAIRARPRWLNPMIVTTMQISQMVVGVAVTLLGFYYSARAADHQSCRIKRENNTAAFVMYGSYLFLFLQFFVGRYV-GTQSPVASKKTA 248          
BLAST of NO01G05250 vs. NCBI_GenBank
Match: OQR86335.1 (elongation of very long chain fatty acids protein [Achlya hypogyna])

HSP 1 Score: 263.1 bits (671), Expect = 1.200e-66
Identity = 133/268 (49.63%), Postives = 175/268 (65.30%), Query Frame = 0
Query:   30 KVPFTQLFQHYPVLDPLYT-QYEKNFYASTYVKFAQDTWPVLPLALCGMYALMIIVGTKVMVSRPKHEWKTALACWNLMLSIFSFCGMIRTVPHLLHNVATLPFKDTICRHPAETYGEGACGMWVMLFIFSKVPELVDTVFIVFRKSKLQFLHWYHHITVLLFCWHSYAVTSSTGLYFVAMNYSVHAIMYAYYYLTAINAWPKWIPPSIITVAQISQMIVGVGICASSFYFLYTDPEHCQVKRQNVYAGALMYGSYLYLFCDFFVRRF 297
            + PF  L + YP L PLY   +E +F  S    F  D+     + LC +Y ++   G   M +R  ++ KTALA WNL+L+ FSFCG +RTVP LL ++    +  +IC    + YG G  G+WV LFIFSKVPELVDT FIV RK  L FLHWYHHITVL+FCWH++AV S++GLYFVAMNYSVHAIMY YY+LTA+   P+W    ++T  Q+SQM+VGV +C  S ++++   + C V   N+  G LMY SYL LF  FF+ R+
Sbjct:    2 RAPF--LHEAYPALAPLYPFAFENDFVLSWQPSFCADSMQA-AIGLCALYCVLCYAGRHWMATRAPYDLKTALAGWNLLLATFSFCGAVRTVPFLLDSIYQRGWYQSICSEATDHYGNGPTGLWVALFIFSKVPELVDTFFIVVRKKPLIFLHWYHHITVLMFCWHAFAVRSASGLYFVAMNYSVHAIMYFYYFLTAVGYRPRW--ALMVTAVQLSQMVVGVAVCTMSVFYIHRG-DSCHVDHANLKWGILMYSSYLVLFLKFFIERY 263          
The following BLAST results are available for this feature:
BLAST of NO01G05250 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
ACV21066.11.600e-18899.69fatty acid elongase [Nannochloropsis oculata][more]
EWM29442.11.500e-16286.69fatty-acyl [Nannochloropsis gaditana][more]
XP_005855601.13.300e-16286.13fatty-acyl [Nannochloropsis gaditana CCMP526] >EKU... [more]
XP_005854181.16.900e-12871.94fatty-acyl [Nannochloropsis gaditana CCMP526] >EKU... [more]
EWM21280.15.000e-7867.49fatty-acyl, partial [Nannochloropsis gaditana][more]
GAX19603.12.400e-7251.12elongation of very long chain fatty acids protein ... [more]
GAX09713.11.900e-6955.46elongation of very long chain fatty acids protein ... [more]
XP_002293395.12.700e-6844.83long chain fatty acid elongase [Thalassiosira pseu... [more]
XP_002184740.18.000e-6850.20predicted protein [Phaeodactylum tricornutum CCAP ... [more]
OQR86335.11.200e-6649.63elongation of very long chain fatty acids protein ... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL005nonsL005Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR047ncniR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR091ngnoR091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK007734NSK007734Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G05250.1NO01G05250.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|577691gene_558Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100083g23gene1169Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G05250.1NO01G05250.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G05250 ID=NO01G05250|Name=NO01G05250|organism=Nannochloropsis oceanica|type=gene|length=2514bp
CAACAGGTTTTCCTTCATCGTCTGGAGAGGAATAACCGAGCCCGCGCCGC
ACAGGAAGAAGAGAAGCAGCAGCATTGGAAGAAGATGCCCAAGCTCCCAG
AAATCTCTAACATCTTCAAATTCTTGAAGGCAGACCCTTCCAAGATCGTC
CCCTACAAGAGCATCCCGGACAAAGTGCCCTTCACACAGgtacgcgtcac
cttcctcttttttcttcttgctacatcagatcatatttgtactatctacg
ctgtctactatcgaggaaagggcaaattgtgtgcgtgctgtgtacaagtt
tctctcttctcttcacaacgttgtgtcctcataatggtaccctgcctgat
gatatggtgcaacacacggcctcgcgcaggcgggcagtttctggtcatta
gcgttggcgctcatcgccttctgattctattggaataatagctcaattat
atagcatgcactggcttccccttgaaaatgagatgcgaatttctttactg
agttttatcccctttactctcccgcacctacagCTCTTTCAGCATTACCC
CGTCTTAGACCCCTTGTATACCCAGTATGAGAAGAATTTCTATGCGAGTA
CTTACGTCAAATTTGCGCAAGACACCTGGCCGGTCCTTCCCCTTGCCTTG
TGCGGAATGTACGCGCTGATGATCATCGTCGGCACTAAAGTCATGGTCTC
ACGGCCCAAGCACGAGTGGAAGACGGCGTTGGCATGCTGGAACCTGATGT
TGAGCATTTTCTCCTTCTGTGGGATGATTAGGACGGTTCCGCATTTGCTG
CACAATGTGGCGACGTTGCCCTTTAAGgtaggtacccccctcgatcctct
cctccctcccttcctccctcactccctctctactatgcccccgtcctggc
ccctccgttgtcgtttggcgctggggcctccgatagttacagccacattc
acctgtaatattctcctattttacttcttttctcaattctcagGACACGA
TCTGCCGGCACCCCGCGGAAACGTACGGTGAAGGGGCCTGCGGCATGTGG
GTGATGCTCTTCATCTTCAGCAAAGTCCCCGAGCTAGTAGACACGGTCTT
TATCGTCTTTCGCAAAAGCAAGCTGCAGgtatgtatgtattacttttatc
tcctattgtttctgtctttccttcccgccctccattcgtcgtgtggatgt
aatagatgaaattcttgatcaagactttccagaaggctcggaattggagt
cggccgtgtgtgtggatggataccataagaaattaaagagctccgtctca
tctctcctcccaccattccccatcccattccgcacccaaccactcagTTC
CTGCATTGGTACCACCACATTACCGTCCTCCTCTTCTGCTGGCACTCATA
CGCCGTCACCTCCTCCACCGGCCTCTACTTCGTGGCCATGAACTACTCCG
TGCATGCCATCATGTACGCCTACTACTACCTGgtacgtgccttatttctc
ccgtccctctattagtttctttcccctcacgctaccgtctcatactttac
atatccttgtactcccactcataaggcttttcttttctcctctcccttcc
cccttccctaatcacctcccttagACTGCCATTAACGCCTGGCCTAAGTG
GATTCCCCCCTCCATCATCACCGTCGCGCAGATCTCGCAAATGATCGTCG
GTGTTGGAATCTGTGCTTCCTCTTTTTACTTCCTGTATACAGACCCAGAG
CATTGCCAGGTGAAGCGTCAAAATGTATACGCAGGGGCTCTAATGTATGG
AAGTTACCTATATCTGTTCTGTGACTTCTTTGTGCGACGTTTTTTGAGAG
GAGGCAAGCCAAGATTGGGAGAGGAGAAGAGTGCGGTGTTGACGATGGCC
AAGAAAATCAAGGCTATGTAAGGTGTAGGTGGAGAAGGAGGGAGGGAGGG
AGAGAGGGAGGGACGTTGCGCAGGGACGGGCCTTTGTTTTCGATACTGGA
TTTGTGAGTGTGAAGCGTATCTTCACAATGATAGGCAGACAGGACAGAGG
GAAGAAGGGAAGAGAAGAAGAGAAGAAAGATAGAACGAGAACGAGAACAG
AACGAGAGATAGAACGAGAACTGCAGGAGAAGGCAGGCGAGGGTAAAGGG
AGGGGATACTACAAAATAACCGCTTGATGAACCACGAGAGCACAGCGCCC
ACCGTGGGAAGGAAAGGAGAGAGAGAATGAGAAAGCGAGGAGCCGGTCAC
GGGGATGAGAAGGAAAGGGAATGATGAACAGCTAAAGGAGACTCCGCTGT
GATAGTTCTTGACCCGCCTGCGTTTGCTCTTCTTCCTCCCCGTGCTCCCT
CCCCCCCCACCTTCACCTCTCTTTGTGCATAACGAACAGCGAAAATGCAG
GACGTGTGGACGGAGGACAACAACAAGAAACAGATGAACACAGAGATCAT
AACGAATGATCGCAAAGAAACAAACAAAATCAGAAAGAAGAAAGCAACCG
ACACCGATAGACGA
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protein sequence of NO01G05250.1

>NO01G05250.1-protein ID=NO01G05250.1-protein|Name=NO01G05250.1|organism=Nannochloropsis oceanica|type=polypeptide|length=322bp
MPKLPEISNIFKFLKADPSKIVPYKSIPDKVPFTQLFQHYPVLDPLYTQY
EKNFYASTYVKFAQDTWPVLPLALCGMYALMIIVGTKVMVSRPKHEWKTA
LACWNLMLSIFSFCGMIRTVPHLLHNVATLPFKDTICRHPAETYGEGACG
MWVMLFIFSKVPELVDTVFIVFRKSKLQFLHWYHHITVLLFCWHSYAVTS
STGLYFVAMNYSVHAIMYAYYYLTAINAWPKWIPPSIITVAQISQMIVGV
GICASSFYFLYTDPEHCQVKRQNVYAGALMYGSYLYLFCDFFVRRFLRGG
KPRLGEEKSAVLTMAKKIKAM*
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Synonyms
Publications