NO01G05230, NO01G05230 (gene) Nannochloropsis oceanica

Overview
NameNO01G05230
Unique NameNO01G05230
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2112
Alignment locationchr1:1395218..1397329 -

Link to JBrowse

Properties
Property NameValue
DescriptionBacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:1395218..1397329 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008168methyltransferase activity
GO:0016740transferase activity
GO:0008168methyltransferase activity
GO:0003723RNA binding
Vocabulary: INTERPRO
TermDefinition
IPR029063SAM-dependent_MTases
IPR001678MeTrfase_RsmB/NOP2
IPR023267RCMT
Vocabulary: Biological Process
TermDefinition
GO:0032259methylation
Homology
BLAST of NO01G05230 vs. NCBI_GenBank
Match: EWM29444.1 (Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p [Nannochloropsis gaditana])

HSP 1 Score: 474.9 bits (1221), Expect = 2.900e-130
Identity = 252/414 (60.87%), Postives = 283/414 (68.36%), Query Frame = 0
Query:   94 WCPAEDREGFYALPTAFRLAQWPLYQQGRVYGMDVASGVAVWALGPRPGEDVLDLCCCPGLKLCMLAERMKHKGTVTGVDISRTRLHVCRQVLLKYHIGRHTSHSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLWCRLLCADGCTFQHGPQQAWTGLEEDVIFDSRAYDWTGMEARGQKRMNRGTRRKELLALRALLQLFTPQE----REGEK-----KGELYDRVLVDADCTHDGSTRHMEKVAGMDEAIKSRHGGFLSREKLGGLEALQRGLISNGFRLLRPGGVLVYSTCSLSPRQNEAIVTYLLKAEAGKAVLDPITEFGEPLFSSIGEGEEGEGGREGGKGV---------GPGRLPCRWGSLSGTLVFEPRFGETSGLFIARIRKEEEEVRI 490
            WCP    E FYALP  FR+AQWPLYQQG+VYGMDVASGVAVWALGPRPG++VLDLCCCPGLKLCM+AE+M H GT+TGVDISR RL VCRQ+L+KY IGR                                                 LWCRLLCADGC F+    +AW G EEDVIFDSRAYDW GMEARGQKRMNRG RR+E LALR +L    P E    REG +     +G  YDRVLVDADC+HDGSTRHM KVAG+D++I+ R GGFLS EKLGGLE LQRGL+ N FR LRPGGVLVYSTCSLSPRQNE +V +LLK EA  A+LDPI E G PLFS   E E+GEGG+               G G LPCRWGSL GTL+FEPRFGETSGLFIARI+K++    +
Sbjct:   90 WCPPYASESFYALPPEFRIAQWPLYQQGKVYGMDVASGVAVWALGPRPGDNVLDLCCCPGLKLCMVAEQMHHTGTITGVDISRGRLTVCRQILVKYQIGRAAG------------------------------------VLVSPCSVVPLWCRLLCADGCCFETEWDEAWAGREEDVIFDSRAYDWQGMEARGQKRMNRGARRRESLALRRVL---NPAENGAGREGRRERPNEEGGGYDRVLVDADCSHDGSTRHMLKVAGLDDSIRMRSGGFLSEEKLGGLEELQRGLLRNAFRRLRPGGVLVYSTCSLSPRQNEDVVAHLLKEEA-NAILDPILELGLPLFSCEME-EKGEGGKRSDDNAQANECLHACGRGYLPCRWGSLPGTLLFEPRFGETSGLFIARIKKKQSNSNV 462          
BLAST of NO01G05230 vs. NCBI_GenBank
Match: XP_005855595.1 (s-adenosyl-l-methionine-dependent methyltransferase domain-containing protein [Nannochloropsis gaditana CCMP526] >EKU20758.1 s-adenosyl-l-methionine-dependent methyltransferase domain-containing protein [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 222.2 bits (565), Expect = 3.400e-54
Identity = 107/186 (57.53%), Postives = 118/186 (63.44%), Query Frame = 0
Query:   94 WCPAEDREGFYALPTAFRLAQWPLYQQGRVYGMDVASGVAVWALGPRPGEDVLDLCCCPGLKLCMLAERMKHKGTVTGVDISRTRLHVCRQVLLKYHIGRHTSHSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLWCRLLCADGCTFQHGPQQAWTGLEEDVIFDSRAYDW 280
            WCP    E FYALP  FR+AQWPLYQQG+VYGMDVASGVAVWALGPRPG++VLDLCCCPGLKLCM+AE+M H GT+TGVDISR RL VCRQ+L+KY IGR                                                 LWCRLLCADGC F+    +AW G EEDVIFDSRAYDW
Sbjct:   90 WCPPYASESFYALPPEFRIAQWPLYQQGKVYGMDVASGVAVWALGPRPGDNVLDLCCCPGLKLCMVAEQMHHTGTITGVDISRGRLTVCRQILVKYQIGRAAG------------------------------------VLVSPCSVVPLWCRLLCADGCCFETEWDEAWAGREEDVIFDSRAYDW 239          
BLAST of NO01G05230 vs. NCBI_GenBank
Match: XP_005854179.1 (s-adenosyl-l-methionine-dependent methyltransferase domain-containing protein [Nannochloropsis gaditana CCMP526] >EKU22180.1 s-adenosyl-l-methionine-dependent methyltransferase domain-containing protein [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 222.2 bits (565), Expect = 3.400e-54
Identity = 107/186 (57.53%), Postives = 118/186 (63.44%), Query Frame = 0
Query:   94 WCPAEDREGFYALPTAFRLAQWPLYQQGRVYGMDVASGVAVWALGPRPGEDVLDLCCCPGLKLCMLAERMKHKGTVTGVDISRTRLHVCRQVLLKYHIGRHTSHSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLWCRLLCADGCTFQHGPQQAWTGLEEDVIFDSRAYDW 280
            WCP    E FYALP  FR+AQWPLYQQG+VYGMDVASGVAVWALGPRPG++VLDLCCCPGLKLCM+AE+M H GT+TGVDISR RL VCRQ+L+KY IGR                                                 LWCRLLCADGC F+    +AW G EEDVIFDSRAYDW
Sbjct:   90 WCPPYASESFYALPPEFRIAQWPLYQQGKVYGMDVASGVAVWALGPRPGDNVLDLCCCPGLKLCMVAEQMHHTGTITGVDISRGRLTVCRQILVKYQIGRAAG------------------------------------VLVSPCSVVPLWCRLLCADGCCFETEWDEAWAGREEDVIFDSRAYDW 239          
BLAST of NO01G05230 vs. NCBI_GenBank
Match: XP_024585571.1 (tRNA cytosine-5-methylases and related enzymes of the NOL1/NOP2/sun superfamily [Plasmopara halstedii] >CEG49202.1 tRNA cytosine-5-methylases and related enzymes of the NOL1/NOP2/sun superfamily [Plasmopara halstedii])

HSP 1 Score: 197.2 bits (500), Expect = 1.200e-46
Identity = 144/394 (36.55%), Postives = 192/394 (48.73%), Query Frame = 0
Query:   94 WCPAEDREGFYALPTAFRLAQWPLYQQGRVYGMDVASGVAVWALGPRPGEDVLDLCCCPGLKLCMLAERMKHKGTVTGVDISRTRLHVCRQVLLKYHIGRHTSHSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLW-CRLLCADGCTFQHGPQQAWTGLE-EDVIFDSRAYDWTGMEARGQKRMNRGTRRKELLALRALLQLFTPQEREGEKKGELYDRVLVDADCTHDGSTRHMEKV---AGMDEAIKSRHGGFLSREKLGGLEALQRGLISNGFRLLRPGGVLVYSTCSLSPRQNEAIVTYLLKAEAGKAVLDPITEFGEPLFSSIGEGEEGEGGREGGKGVGPGRLPCRWGSLSGTLVFEPRFGETSGLFIARIRK 483
            W P     GFY+LP +  LA   LY++G VYG+D++SG AV  L   PGE VLDLCC PG KL M+A+ +   G+VTGVD SR+RL  C+Q++ KY +    S S                                             W CRL  ADG TF  GP+     L+  +++FD+       + +R  K               A       +++  E    LYD+VLVDA+CTHDGS RH++++   +  +E ++      L+  ++  +  LQR LI NGF LLR GG+L+YSTCSLS +QNE IV+ LL+ E   A+LDPI                          V    +PCR G L GTL F P    TSGLFIARIRK
Sbjct:   89 WLP-----GFYSLPVSAPLASVDLYKKGEVYGIDISSGYAVKLLNLEPGEHVLDLCCAPGAKLAMVADLLHLCGSVTGVDCSRSRLGACKQLVHKYGLVESQSES-------------------------------------------EQWRCRLFHADGSTFSIGPKTECMHLDGVELLFDTNE-----IASRSSKXXXXXXXXXXXXXXXA------KRQKVLEHDSTLYDKVLVDAECTHDGSIRHLQRLNSTSRWNEYVRDH----LNLSEIERILKLQRALIRNGFSLLRSGGLLIYSTCSLSFKQNEEIVSELLQDEP-LALLDPI--------------------------VAGNDVPCREGKLPGTLRFIPS-QNTSGLFIARIRK 391          
BLAST of NO01G05230 vs. NCBI_GenBank
Match: ETI57688.1 (hypothetical protein F443_00047 [Phytophthora parasitica P1569] >ETM57084.1 hypothetical protein L914_00033 [Phytophthora parasitica])

HSP 1 Score: 193.7 bits (491), Expect = 1.300e-45
Identity = 146/401 (36.41%), Postives = 190/401 (47.38%), Query Frame = 0
Query:   94 WCPAEDREGFYALPTAFRLAQWPLYQQGRVYGMDVASGVAVWALGPRPGEDVLDLCCCPGLKLCMLAERMKHKGTVTGVDISRTRLHVCRQVLLKYHIGRHTSHSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLW-CRLLCADGCTFQHGPQQAWTGLE-EDVIFD-----SRAYDWTGMEARGQKRMNRGTRRKELLALRALLQLFTPQEREGEKKGELYDRVLVDADCTHDGSTRHMEKVAGMDEAIKSRHGGFLSREKLGGLE-----ALQRGLISNGFRLLRPGGVLVYSTCSLSPRQNEAIVTYLLKAEAGKAVLDPITEFGEPLFSSIGEGEEGEGGREGGKGVGPGRLPCRWGSLSGTLVFEPRFGETSGLFIARIRK 483
            W P     GFY+LP +  LA+  LY+QG+VYG+D++SG AV  L  +PGE VLDLCC PG KL M+A+ ++  G+VTGVD SR+RL  CRQ++ KY + +  +                                               W CRL  ADG TF  GP+     ++  +++ D     SRA                  +R++LL L                   LYD+VLVDA+CTHDGS RH+++   +D A K    G   R+ L   E      LQ GLI NGF LLRPGG ++YSTCSLS +QNE IV+  L+ E   A LD I                          V    +PC+ G L GTL F P    TSGLFIARI+K
Sbjct:   94 WLP-----GFYSLPVSAPLARVDLYKQGQVYGIDISSGYAVTLLNIKPGEHVLDLCCAPGAKLTMIADLLQLHGSVTGVDFSRSRLGACRQLVHKYELFQPQNE-------------------------------------------LNKWRCRLFHADGRTFNIGPKTECVHIDGMELLLDTQEIASRAPKDXXXXXXXXXXXXXXAKRQKLLVL----------------DSTLYDKVLVDAECTHDGSIRHLQR---LDTATK---WGEYVRDHLNSSEVERILTLQHGLIRNGFSLLRPGGTMIYSTCSLSVKQNEDIVSKFLQDEP-LAALDQI--------------------------VIDKDVPCKEGKLPGTLRFTPS-QNTSGLFIARIKK 396          
BLAST of NO01G05230 vs. NCBI_GenBank
Match: XP_008889646.1 (hypothetical protein PPTG_00032 [Phytophthora parasitica INRA-310] >ETK97404.1 hypothetical protein L915_00043 [Phytophthora parasitica] >ETL50758.1 hypothetical protein L916_00042 [Phytophthora parasitica] >ETM03788.1 hypothetical protein L917_00031 [Phytophthora parasitica] >ETN23428.1 hypothetical protein PPTG_00032 [Phytophthora parasitica INRA-310] >ETO86423.1 hypothetical protein F444_00038 [Phytophthora parasitica P1976] >ETP27421.1 hypothetical protein F441_00043 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 193.7 bits (491), Expect = 1.300e-45
Identity = 146/401 (36.41%), Postives = 190/401 (47.38%), Query Frame = 0
Query:   94 WCPAEDREGFYALPTAFRLAQWPLYQQGRVYGMDVASGVAVWALGPRPGEDVLDLCCCPGLKLCMLAERMKHKGTVTGVDISRTRLHVCRQVLLKYHIGRHTSHSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLW-CRLLCADGCTFQHGPQQAWTGLE-EDVIFD-----SRAYDWTGMEARGQKRMNRGTRRKELLALRALLQLFTPQEREGEKKGELYDRVLVDADCTHDGSTRHMEKVAGMDEAIKSRHGGFLSREKLGGLE-----ALQRGLISNGFRLLRPGGVLVYSTCSLSPRQNEAIVTYLLKAEAGKAVLDPITEFGEPLFSSIGEGEEGEGGREGGKGVGPGRLPCRWGSLSGTLVFEPRFGETSGLFIARIRK 483
            W P     GFY+LP +  LA+  LY+QG+VYG+D++SG AV  L  +PGE VLDLCC PG KL M+A+ ++  G+VTGVD SR+RL  CRQ++ KY + +  +                                               W CRL  ADG TF  GP+     ++  +++ D     SRA                  +R++LL L                   LYD+VLVDA+CTHDGS RH+++   +D A K    G   R+ L   E      LQ GLI NGF LLRPGG ++YSTCSLS +QNE IV+  L+ E   A LD I                          V    +PC+ G L GTL F P    TSGLFIARI+K
Sbjct:   94 WLP-----GFYSLPVSAPLARVDLYKQGQVYGIDISSGYAVTLLNIKPGEHVLDLCCAPGAKLTMIADLLQLHGSVTGVDFSRSRLGACRQLVHKYELFQPQNE-------------------------------------------LNKWRCRLFHADGRTFNIGPKTECVHIDGMELLLDTQEIASRAPKDXXXXXXXXXXXXXXAKRQKLLVL----------------DSTLYDKVLVDAECTHDGSIRHLQR---LDTATK---WGEYVRDHLNSSEVERILTLQHGLIRNGFSLLRPGGTMIYSTCSLSVKQNEDIVSKFLQDEP-LAALDQI--------------------------VIDKDVPCKEGKLPGTLRFTPS-QNTSGLFIARIKK 396          
BLAST of NO01G05230 vs. NCBI_GenBank
Match: ETP55400.1 (hypothetical protein F442_00036 [Phytophthora parasitica P10297])

HSP 1 Score: 193.7 bits (491), Expect = 1.300e-45
Identity = 146/401 (36.41%), Postives = 190/401 (47.38%), Query Frame = 0
Query:   94 WCPAEDREGFYALPTAFRLAQWPLYQQGRVYGMDVASGVAVWALGPRPGEDVLDLCCCPGLKLCMLAERMKHKGTVTGVDISRTRLHVCRQVLLKYHIGRHTSHSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLW-CRLLCADGCTFQHGPQQAWTGLE-EDVIFD-----SRAYDWTGMEARGQKRMNRGTRRKELLALRALLQLFTPQEREGEKKGELYDRVLVDADCTHDGSTRHMEKVAGMDEAIKSRHGGFLSREKLGGLE-----ALQRGLISNGFRLLRPGGVLVYSTCSLSPRQNEAIVTYLLKAEAGKAVLDPITEFGEPLFSSIGEGEEGEGGREGGKGVGPGRLPCRWGSLSGTLVFEPRFGETSGLFIARIRK 483
            W P     GFY+LP +  LA+  LY+QG+VYG+D++SG AV  L  +PGE VLDLCC PG KL M+A+ ++  G+VTGVD SR+RL  CRQ++ KY + +  +                                               W CRL  ADG TF  GP+     ++  +++ D     SRA                  +R++LL L                   LYD+VLVDA+CTHDGS RH+++   +D A K    G   R+ L   E      LQ GLI NGF LLRPGG ++YSTCSLS +QNE IV+  L+ E   A LD I                          V    +PC+ G L GTL F P    TSGLFIARI+K
Sbjct:   94 WLP-----GFYSLPVSAPLARVDLYKQGQVYGIDISSGYAVTLLNIKPGEHVLDLCCAPGAKLTMIADLLQLHGSVTGVDFSRSRLGACRQLVHKYELFQPQNE-------------------------------------------LNKWRCRLFHADGRTFNIGPKTECVHIDGMELLLDTQEIASRAPKDXXXXXXXXXXXXXXAKRQKLLVL----------------DSTLYDKVLVDAECTHDGSIRHLQR---LDTATK---WGEYVRDHLNSSEVERILTLQHGLIRNGFSLLRPGGTMIYSTCSLSVKQNEDIVSKFLQDEP-LAALDQI--------------------------VIDKDVPCKEGKLPGTLRFTPS-QNTSGLFIARIKK 396          
BLAST of NO01G05230 vs. NCBI_GenBank
Match: KUF78421.1 (Ribosomal RNA small subunit methyltransferase F [Phytophthora nicotianae])

HSP 1 Score: 193.7 bits (491), Expect = 1.300e-45
Identity = 146/401 (36.41%), Postives = 190/401 (47.38%), Query Frame = 0
Query:   94 WCPAEDREGFYALPTAFRLAQWPLYQQGRVYGMDVASGVAVWALGPRPGEDVLDLCCCPGLKLCMLAERMKHKGTVTGVDISRTRLHVCRQVLLKYHIGRHTSHSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLW-CRLLCADGCTFQHGPQQAWTGLE-EDVIFD-----SRAYDWTGMEARGQKRMNRGTRRKELLALRALLQLFTPQEREGEKKGELYDRVLVDADCTHDGSTRHMEKVAGMDEAIKSRHGGFLSREKLGGLE-----ALQRGLISNGFRLLRPGGVLVYSTCSLSPRQNEAIVTYLLKAEAGKAVLDPITEFGEPLFSSIGEGEEGEGGREGGKGVGPGRLPCRWGSLSGTLVFEPRFGETSGLFIARIRK 483
            W P     GFY+LP +  LA+  LY+QG+VYG+D++SG AV  L  +PGE VLDLCC PG KL M+A+ ++  G+VTGVD SR+RL  CRQ++ KY + +  +                                               W CRL  ADG TF  GP+     ++  +++ D     SRA                  +R++LL L                   LYD+VLVDA+CTHDGS RH+++   +D A K    G   R+ L   E      LQ GLI NGF LLRPGG ++YSTCSLS +QNE IV+  L+ E   A LD I                          V    +PC+ G L GTL F P    TSGLFIARI+K
Sbjct:   94 WLP-----GFYSLPVSAPLARVDLYKQGQVYGIDISSGYAVTLLNIKPGEHVLDLCCAPGAKLTMIADLLQLHGSVTGVDFSRSRLGACRQLVHKYELFQPQNE-------------------------------------------LNKWRCRLFHADGRTFNIGPKTECVHIDGMELLLDTQEIASRAPKDXXXXXXXXXXXXXXAKRQKLLVL----------------DSTLYDKVLVDAECTHDGSIRHLQR---LDTATK---WGEYVRDHLNSSEVERILTLQHGLIRNGFSLLRPGGTMIYSTCSLSVKQNEDIVSKFLQDEP-LAALDQI--------------------------VIDKDVPCKEGKLPGTLRFTPS-QNTSGLFIARIKK 396          
BLAST of NO01G05230 vs. NCBI_GenBank
Match: XP_009533032.1 (hypothetical protein PHYSODRAFT_515950 [Phytophthora sojae] >EGZ12699.1 hypothetical protein PHYSODRAFT_515950 [Phytophthora sojae])

HSP 1 Score: 189.9 bits (481), Expect = 1.900e-44
Identity = 121/332 (36.45%), Postives = 177/332 (53.31%), Query Frame = 0
Query:   94 WCPAEDREGFYALPTAFRLAQWPLYQQGRVYGMDVASGVAVWALGPRPGEDVLDLCCCPGLKLCMLAERMKHKGTVTGVDISRTRLHVCRQVLLKYHIGRHTSHSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLW-CRLLCADGCTFQHGPQQAWTGLE-EDVIFDSRAYDWTGMEARGQKRMNRGTRRKELLALRALLQLFTPQEREGEKKGELYDRVLVDADCTHDGSTRHMEKV---AGMDEAIKSRHGGFLSREKLGGLEALQRGLISNGFRLLRPGGVLVYSTCSLSPRQNEAIVTYLLKAEAGKAVLDPI 421
            W P     GFY+LP +  LA+  LY++G++YG+D++SG AV  L  +PGE VLDLCC PG KL M+A+ ++ +G+VTGVD SR+RL  CRQ++ KY + +  S +                                             W CRL  ADG TF  GP+     ++  +V+ D++       + R +KR N+  R ++    + L+               LYD+VLVDA+CTHDGS RH++++   A  +E ++      L+  ++  +  LQ GLI NGF +LRPGG ++YSTCSLS +QNE IV+  L+ E   A LDPI
Sbjct:   96 WLP-----GFYSLPVSAPLARVGLYKEGQLYGIDISSGYAVSLLDIQPGEHVLDLCCAPGAKLTMIADLLQLRGSVTGVDFSRSRLGACRQLVHKYQLFQPESEAADTK-----------------------------------------WRCRLFHADGRTFNIGPKTECAHIDGMEVLLDTQEIASRAPKDRMRKRKNKSARARDAKRQKLLV-----------LDSALYDKVLVDAECTHDGSIRHLQRLNTAAKWEEYVRDH----LNSSEIERILKLQHGLIRNGFSMLRPGGTMIYSTCSLSVKQNEDIVSSFLQDEP-LAKLDPI 365          
BLAST of NO01G05230 vs. NCBI_GenBank
Match: XP_008617930.1 (hypothetical protein SDRG_13611 [Saprolegnia diclina VS20] >EQC28533.1 hypothetical protein SDRG_13611 [Saprolegnia diclina VS20])

HSP 1 Score: 188.0 bits (476), Expect = 7.200e-44
Identity = 137/393 (34.86%), Postives = 180/393 (45.80%), Query Frame = 0
Query:  101 EGFYALPTAFRLAQWPLYQQGRVYGMDVASGVAVWALGPRPGEDVLDLCCCPGLKLCMLAERMKHKGTVTGVDISRTRLHVCRQVLLKYHIGRHTSHSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLW-CRLLCADGCTFQHG------PQQAWTGLEEDVIFDSRAYDWTGMEARGQKRMNRGTRRKELLALRALLQLFTPQEREGEKKGELYDRVLVDADCTHDGSTRHMEKVAGMDEAIKSRHGGFLSREKLGGLEALQRGLISNGFRLLRPGGVLVYSTCSLSPRQNEAIVTYLLKAEAGKAVLDPITEFGEPLFSSIGEGEEGEGGREGGKGVGPGRLPCRWGSLSGTLVFEPRFGETSGLFIARIRKEEEE 487
            + FYA+ +   L+   LY   ++YGM+ +SG AV  L P+PG+ VLDLCC PG KL MLA+ +  +G+VTGVD S+ R+  CR +L KY + +    +                                             W CRL  ADG  F  G      P  A      DVI DS   +    ++  +KRMN+  R + L   R      T           LYD+VLVDA+CTHDGS RH+ K+   D A +S    +LS   + G+ ALQ  LI NGFRLL PGG +VYSTCSLS +QNE IV   LK +   A L PI                               +PC+ GS+  T+ F P   +  GLFIA   K  +E
Sbjct:   58 KSFYAVSSLDALSSSSLYSSAKIYGMEASSGFAVATLNPQPGDHVLDLCCAPGAKLAMLADVLGRRGSVTGVDYSKNRISACRSLLHKYDLVQSLPDT--------------------------------------------PWRCRLFHADGRRFAEGAPTSSDPSAAVHDSILDVILDSAEVENRSKKSIARKRMNKSARARALKVQREATSAAT--------ASCLYDKVLVDAECTHDGSLRHLAKLTTAD-AWQSYLENYLSPSHVAGILALQHDLIRNGFRLLVPGGRMVYSTCSLSLKQNEEIVATFLK-DTPSASLVPI---------------------------DMTNVPCQPGSIPHTVRFTP-LHDMGGLFIALFTKATDE 368          
The following BLAST results are available for this feature:
BLAST of NO01G05230 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM29444.12.900e-13060.87Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2... [more]
XP_005855595.13.400e-5457.53s-adenosyl-l-methionine-dependent methyltransferas... [more]
XP_005854179.13.400e-5457.53s-adenosyl-l-methionine-dependent methyltransferas... [more]
XP_024585571.11.200e-4636.55tRNA cytosine-5-methylases and related enzymes of ... [more]
ETI57688.11.300e-4536.41hypothetical protein F443_00047 [Phytophthora para... [more]
XP_008889646.11.300e-4536.41hypothetical protein PPTG_00032 [Phytophthora para... [more]
ETP55400.11.300e-4536.41hypothetical protein F442_00036 [Phytophthora para... [more]
KUF78421.11.300e-4536.41Ribosomal RNA small subunit methyltransferase F [P... [more]
XP_009533032.11.900e-4436.45hypothetical protein PHYSODRAFT_515950 [Phytophtho... [more]
XP_008617930.17.200e-4434.86hypothetical protein SDRG_13611 [Saprolegnia dicli... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL005nonsL005Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR047ncniR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR091ngnoR091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G05230.1NO01G05230.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|551325gene_554Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100083g21gene1171Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G05230.1NO01G05230.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G05230 ID=NO01G05230|Name=NO01G05230|organism=Nannochloropsis oceanica|type=gene|length=2112bp
ATGGCCGAGGCGGAAGAAGCGGCATTTGCAACCGAGCATGCTCGGCTCGT
GCGTCTGCTCCACAACCAAGGCAAGGAGGACGTCGGAGACCTCCGGAAAA
CCTCCACGACCACGGCTAGAACGACCACCAGCAATAGCAGTAGCAGCAGC
AGCAGCAGCTCTATCCCACGCTACATTCGTCTTCGTCGCCCTCGGCCCGT
GGCGAGTAAGGAGGAAGAGGAAGAGGAGGAGCAGGCCACGCGAAAGGCGA
TCGTTGCGGCGGGAGGTCACGTAGTCGTGTGGTGCCCAGCAGAGGATAGG
GAGGGCTTCTATGCCTTACCTACAGCCTTTCGTTTGGCGCAATGGCCGCT
ATACCAGCAAGGGCGGGTTTATGGGATGGATGTGGCGTCAGGGGTCGCGG
TATGGGCATTGGGTCCGCGACCGGGAGAGGACGTGTTGGATTTGTGTTGT
TGCCCGGGCCTGAAATTATGCATGCTGGCAGAGCGAATGAAGCACAAGGG
GACAGTCACAGgtgagttgatgaagtaaaaagaatgtgggagacgattga
aacgtaatataatttgggggtgggactagaatacatgccgccctacagcc
cccctcctttcttcccacccatttgccacgcacatacgcatgctgccgca
attctcctccctcatcctccttctccttctattattcctcctttcctttc
ttttcttttcccaccgtccagGCGTAGACATCTCTCGAACCCGCCTCCAT
GTCTGCCGCCAAGTCCTCCTTAAGTACCATATCGGCCGGCATACCTCCCA
TTCTCTTGCCCCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCT
CCTCCTCCTCCTTCTCCTCAGCCTCCTCCACCTTCTCATCCTCCTGCTCC
ACTTCCTCCTCCCCCCCTTCCCCCCTGACCTCCTCCTTGTGGTGTCGGTT
GCTATGCGCGGACGGCTGCACCTTCCAGCACGGCCCCCAGCAGGCGTGGA
CCGGATTGGAGGAAGACGTGATTTTTGACTCGAGGGCTTATGACTGGACG
gtgagtcagaaatggaaggaagaagggaaggagggaggaagggataaggg
aatatgggaatggtcggtttaaggcctatgtggtgcttcagctcctggcc
agcctcttgaggctttcccctgcatcaacgctattcgcatgaaatacacc
cttcctttctaaccccctcctcttgtaaacgcagGGCATGGAAGCCCGTG
GCCAGAAGCGCATGAACCGAGGGACTCGCCGAAAGGAATTACTCGCCCTG
CGTGCCCTCCTCCAGCTTTTTACTCCACAGGAGAGGGAGGGTGAGAAGAA
AGGGGAGCTGTATGACAGAGTATTGGTGGATGCGGACTGCACGCACGATG
GGTCGACGCGGCACATGGAAAAAGTGGCGGGCATGGATGAAGCCATgtga
gtgacacgaagaaggattccttccttcttttcttcctccctccctccctc
cctccacccccccttcatggtgtgcctccatcaagcttcgtgtttcgact
ttggcgatggaaatcttggatacccagaaaagctgcaaccagcaccttga
ccgtgattttcattcatcctccccccctccctcttatcccctcagCAAAT
CACGACATGGCGGGTTCTTGTCCCGAGAAAAACTAGGAGGGCTCGAGGCC
CTCCAACGAGGATTGATATCTAATGGATTCCGTCTCTTGCGGCCTGGTGG
TGTGTTGGTCTACAGCACGTGCTCTTTATCTCCCCGACAGAACGAGGCCA
TCGTCACATACTTACTGAAAGCCGAAGCAGGGAAGGCAGTCCTTGATCCT
ATTACTGAATTTGGCGAGCCTTTGTTTTCTTCGATTGGGGAAGGAGAGGA
GGGGGAAGGAGGGAGGGAGGGAGGGAAGGGGGTGGGGCCAGGGCGGTTGC
CGTGTCGATGGGGGAGCTTATCGGGCACATTGGTGTTTGAGCCACGCTTT
GGGGAGACGAGTGGGTTGTTTATTGCACGGATTAGAAAAGAAGAGGAAGA
AGTAAGAATTAACTGATACTCTGACCCATTTATTAGACGAGTGGGTTGTC
TATAGCACGGAT
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protein sequence of NO01G05230.1

>NO01G05230.1-protein ID=NO01G05230.1-protein|Name=NO01G05230.1|organism=Nannochloropsis oceanica|type=polypeptide|length=491bp
MAEAEEAAFATEHARLVRLLHNQGKEDVGDLRKTSTTTARTTTSNSSSSS
SSSSIPRYIRLRRPRPVASKEEEEEEEQATRKAIVAAGGHVVVWCPAEDR
EGFYALPTAFRLAQWPLYQQGRVYGMDVASGVAVWALGPRPGEDVLDLCC
CPGLKLCMLAERMKHKGTVTGVDISRTRLHVCRQVLLKYHIGRHTSHSLA
PSSSSSSSSSSSSSSSSFSSASSTFSSSCSTSSSPPSPLTSSLWCRLLCA
DGCTFQHGPQQAWTGLEEDVIFDSRAYDWTGMEARGQKRMNRGTRRKELL
ALRALLQLFTPQEREGEKKGELYDRVLVDADCTHDGSTRHMEKVAGMDEA
IKSRHGGFLSREKLGGLEALQRGLISNGFRLLRPGGVLVYSTCSLSPRQN
EAIVTYLLKAEAGKAVLDPITEFGEPLFSSIGEGEEGEGGREGGKGVGPG
RLPCRWGSLSGTLVFEPRFGETSGLFIARIRKEEEEVRIN*
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Synonyms
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