NO01G05130, NO01G05130 (gene) Nannochloropsis oceanica

Overview
NameNO01G05130
Unique NameNO01G05130
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2042
Alignment locationchr1:1363202..1365243 -

Link to JBrowse

Properties
Property NameValue
DescriptionTryptophanyl-trna synthetase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:1363202..1365243 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006418tRNA aminoacylation for protein translation
GO:0006436tryptophanyl-tRNA aminoacylation
GO:0006412translation
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004812aminoacyl-tRNA ligase activity
GO:0005524ATP binding
GO:0004830tryptophan-tRNA ligase activity
GO:0000166nucleotide binding
GO:0003824catalytic activity
GO:0000166nucleotide binding
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: INTERPRO
TermDefinition
IPR002305aa-tRNA-synth_Ic
IPR002306Trp-tRNA-ligase
Homology
BLAST of NO01G05130 vs. NCBI_GenBank
Match: GAQ87790.1 (Tryptophanyl-tRNA synthetase [Klebsormidium nitens])

HSP 1 Score: 446.4 bits (1147), Expect = 1.000e-121
Identity = 227/350 (64.86%), Postives = 268/350 (76.57%), Query Frame = 0
Query:   94 GGE----RKKRVLSGVQPTGSLHLGNYLGAIRQWVKNQDEYESLFCVVDLHAITAPHDPKRLRQETIEAAALYLAAGIDPSKSTVFVQSHVLAHTELTWLLNCVTPMNWLERMIQFKEKAVKQG-ENVGVGLFDYPVLMAADILLYQAELVPVGEDQRQHLELTRDIARRFNDQFCNKKAKRR-----KVFRDPEALIVKEGARVMSLLDGTSKMSKSAENDGSRINLLDSPETIRNKIKRCKTDMSVGLEWDNPARPECTNLLNIYLAVTEKEGKTKESILEEVEGMNWGAFKPLLADAVVAHLEPIQRRYREVMEDPEHIEGILTRGAADADAIASQTLQWAKDAMGF 434
            GGE    RK+RVLSGVQPTGSLHLGNYLGAI+ WV  QD +E+ FC VDLHAIT PHDP  L   T  +AALY+AAGIDP+K+++FVQSHV AH ELTWLL+CVTP+ WL RMIQFKEK++KQG E VG GL  YPVLMAADILLYQ++LVPVGEDQ+QH+EL RD+A+RFNDQF   K K+R     ++F+ PE +    GARVMSL DGT+KMSKS   DGSRINLLDSP  I  KIKRCKTD   GLE+ NP RPEC+NLL IY  VT   G++K+ +L E   ++WG FKPLLADAVVAHLEPIQ RY EV+ DP +++ +L  GAA A+  A  TL+ A DAMGF
Sbjct:  102 GGEKAVARKQRVLSGVQPTGSLHLGNYLGAIKNWVALQDTFETFFCAVDLHAITLPHDPASLAHTTKNSAALYIAAGIDPAKASIFVQSHVSAHAELTWLLSCVTPIGWLNRMIQFKEKSLKQGNEEVGSGLLTYPVLMAADILLYQSDLVPVGEDQKQHIELARDVAKRFNDQFGGNKWKKRGGRGGRIFKVPEIMTPPTGARVMSLTDGTAKMSKSDPADGSRINLLDSPSEIAKKIKRCKTDGFEGLEYGNPERPECSNLLGIYEVVT---GRSKQEVLAECGSLSWGQFKPLLADAVVAHLEPIQTRYNEVVADPAYLDTVLANGAAKANETARLTLKNAYDAMGF 448          
BLAST of NO01G05130 vs. NCBI_GenBank
Match: XP_002183670.1 (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >EEC44852.1 predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 445.7 bits (1145), Expect = 1.700e-121
Identity = 227/362 (62.71%), Postives = 270/362 (74.59%), Query Frame = 0
Query:  100 RVLSGVQPTGSLHLGNYLGAIRQWVKNQD------------EYESLFCVVDLHAITAPHDPKRLRQETIEAAALYLAAGIDPSKSTVFVQSHVLAHTELTWLLNCVTPMNWLERMIQFKEKAVKQGENVGVGLFDYPVLMAADILLYQAELVPVGEDQRQHLELTRDIARRFNDQFC--NKKAKR--------RKVFRDPEALIVKEGARVMSLLDGTSKMSKSAENDGSRINLLDSPETIRNKIKRCKTDMSVGLEWDNPARPECTNLLNIYLAVTEKEGKTKESILEEVEGMNWGAFKPLLADAVVAHLEPIQRRYREVMEDPEHIEGILTRGAADADAIASQTLQWAKDAMGFYSLGRK 440
            RVLSGVQPTG+LHLGNYLGAIRQWV  Q+            + E+ FCVVDLHAIT PH+P+ L + T+ +AALYLAAGIDP+KS VFVQSHV  H EL WLL C+TPMNWLERMIQFK+KA KQGE+VG GLF YP LMAADILLYQA+ +PVGEDQRQHLEL RD  RRF+D FC  N   KR        R VF +PEA+IVKEGARVMSL DGTSKMSKS  NDGSRIN+LD P+ IR K+KRCKTD   G+EWDNP RPE TNLLNI+ AV  +  +T++ IL +V  + WG FKP+LADA+V HLEPIQ+RY  V  D E+++ +L  GA  A  +A +TL  A+ AMGF ++ ++
Sbjct:    1 RVLSGVQPTGTLHLGNYLGAIRQWVDFQNAPDTQDEEGNVIQTENFFCVVDLHAITMPHNPQDLGESTLSSAALYLAAGIDPTKSKVFVQSHVPQHAELAWLLMCITPMNWLERMIQFKDKAKKQGESVGTGLFTYPSLMAADILLYQADKIPVGEDQRQHLELARDTTRRFHDLFCKGNPYKKRCKAAGIPSRPVFVEPEAMIVKEGARVMSLQDGTSKMSKSDVNDGSRINVLDPPDVIREKVKRCKTDAIKGIEWDNPERPEATNLLNIFAAV--QPDRTRDDILAQVRDLTWGDFKPILADAIVNHLEPIQKRYHAVRADEEYLQAVLKEGADVASEVAQRTLHSARVAMGFATVSQE 360          
BLAST of NO01G05130 vs. NCBI_GenBank
Match: OAE23229.1 (hypothetical protein AXG93_4456s1010 [Marchantia polymorpha subsp. ruderalis])

HSP 1 Score: 445.3 bits (1144), Expect = 2.200e-121
Identity = 222/359 (61.84%), Postives = 277/359 (77.16%), Query Frame = 0
Query:   86 SSSSSAIEGGERKKRVLSGVQPTGSLHLGNYLGAIRQWVKNQDEYESLFCVVDLHAITAPHDPKRLRQETIEAAALYLAAGIDPSKSTVFVQSHVLAHTELTWLLNCVTPMNWLERMIQFKEKAVKQGENVGVGLFDYPVLMAADILLYQAELVPVGEDQRQHLELTRDIARRFNDQFCNKKAKRR-----KVFRDPEALIVKEGARVMSLLDGTSKMSKSAENDGSRINLLDSPETIRNKIKRCKTDMSVGLEWDNPARPECTNLLNIYLAVTEKEGKTKESILEEVEGMNWGAFKPLLADAVVAHLEPIQRRYREVMEDPEHIEGILTRGAADADAIASQTLQWAKDAMGFYSLGRK 440
            S   S+ +    KKRV+SGVQPTG++HLGNYLGAI+ WV  QD Y++LF VVDLHAIT PH+PK L + T ++AALY+A G+DPSK+++FVQSHV AH ELTWLL+CVTP++WL +MIQFKEKA K GE+VG GL  YP+LMA+DILLYQ +LVPVGEDQRQHLELTRD+A R N+ +  KK K+R     ++F+ P+ALI   GAR+MSL DGTSKMSKSA +D SRINLLD+ + I  KI RCKTD   G+E+DNP RPECTNLL IY  V+   GKTKE + EEV+ MNWG FKPLLADA+V HL PIQ+RY EV+ +P +++GIL  GA  A+ IA+ TL+  ++AMGF    R+
Sbjct:  338 SDGESSAQASTIKKRVVSGVQPTGAIHLGNYLGAIKNWVALQDVYDTLFFVVDLHAITLPHEPKELIEATKKSAALYIACGVDPSKASIFVQSHVRAHAELTWLLSCVTPISWLNKMIQFKEKARKSGEDVGTGLLTYPLLMASDILLYQCDLVPVGEDQRQHLELTRDVADRVNNIYGGKKWKKRGGPGGRIFKVPDALIPPAGARIMSLTDGTSKMSKSAPSDQSRINLLDTRDEIVRKITRCKTDSFTGMEFDNPDRPECTNLLGIYQLVS---GKTKEEVAEEVKDMNWGQFKPLLADALVEHLTPIQKRYGEVVAEPAYLDGILKEGAERAEVIANATLENIQNAMGFLPRQRR 693          
BLAST of NO01G05130 vs. NCBI_GenBank
Match: PTQ29626.1 (hypothetical protein MARPO_0137s0001 [Marchantia polymorpha])

HSP 1 Score: 445.3 bits (1144), Expect = 2.200e-121
Identity = 222/359 (61.84%), Postives = 277/359 (77.16%), Query Frame = 0
Query:   86 SSSSSAIEGGERKKRVLSGVQPTGSLHLGNYLGAIRQWVKNQDEYESLFCVVDLHAITAPHDPKRLRQETIEAAALYLAAGIDPSKSTVFVQSHVLAHTELTWLLNCVTPMNWLERMIQFKEKAVKQGENVGVGLFDYPVLMAADILLYQAELVPVGEDQRQHLELTRDIARRFNDQFCNKKAKRR-----KVFRDPEALIVKEGARVMSLLDGTSKMSKSAENDGSRINLLDSPETIRNKIKRCKTDMSVGLEWDNPARPECTNLLNIYLAVTEKEGKTKESILEEVEGMNWGAFKPLLADAVVAHLEPIQRRYREVMEDPEHIEGILTRGAADADAIASQTLQWAKDAMGFYSLGRK 440
            S   S+ +    KKRV+SGVQPTG++HLGNYLGAI+ WV  QD Y++LF VVDLHAIT PH+PK L + T ++AALY+A G+DPSK+++FVQSHV AH ELTWLL+CVTP++WL +MIQFKEKA K GE+VG GL  YP+LMA+DILLYQ +LVPVGEDQRQHLELTRD+A R N+ +  KK K+R     ++F+ P+ALI   GAR+MSL DGTSKMSKSA +D SRINLLD+ + I  KI RCKTD   G+E+DNP RPECTNLL IY  V+   GKTKE + EEV+ MNWG FKPLLADA+V HL PIQ+RY EV+ +P +++GIL  GA  A+ IA+ TL+  ++AMGF    R+
Sbjct:   72 SDGESSAQASTIKKRVVSGVQPTGAIHLGNYLGAIKNWVALQDVYDTLFFVVDLHAITLPHEPKELIEATKKSAALYIACGVDPSKASIFVQSHVRAHAELTWLLSCVTPISWLNKMIQFKEKARKSGEDVGTGLLTYPLLMASDILLYQCDLVPVGEDQRQHLELTRDVADRVNNIYGGKKWKKRGGPGGRIFKVPDALIPPAGARIMSLTDGTSKMSKSAPSDQSRINLLDTRDEIVRKITRCKTDSFTGMEFDNPDRPECTNLLGIYQLVS---GKTKEEVAEEVKDMNWGQFKPLLADALVEHLTPIQKRYGEVVAEPAYLDGILKEGAERAEVIANATLENIQNAMGFLPRQRR 427          
BLAST of NO01G05130 vs. NCBI_GenBank
Match: WP_085434227.1 (tryptophan--tRNA ligase [unicellular cyanobacterium SU2])

HSP 1 Score: 443.0 bits (1138), Expect = 1.100e-120
Identity = 219/336 (65.18%), Postives = 260/336 (77.38%), Query Frame = 0
Query:   98 KKRVLSGVQPTGSLHLGNYLGAIRQWVKNQDEYESLFCVVDLHAITAPHDPKRLRQETIEAAALYLAAGIDPSKSTVFVQSHVLAHTELTWLLNCVTPMNWLERMIQFKEKAVKQGENVGVGLFDYPVLMAADILLYQAELVPVGEDQRQHLELTRDIARRFNDQFCNKKAKRRKVFRDPEALIVKEGARVMSLLDGTSKMSKSAENDGSRINLLDSPETIRNKIKRCKTDMSVGLEWDNPARPECTNLLNIYLAVTEKEGKTKESILEEVEGMNWGAFKPLLADAVVAHLEPIQRRYREVMEDPEHIEGILTRGAADADAIASQTLQWAKDAMGF 434
            K+RVLSGVQPTG+LHLGNYLGAI  WV+ Q  Y++ FCVVDLHAIT PH+PK L Q+T   AALYLA GID   ST+FVQSHV AH+EL WLLNC+TP+NWLERMIQFKEKAVKQGENV VGL DYPVLMAADILLY A+ VPVGEDQ+QHLELTRDIA RFNDQF N +     V + PE LI  EGARVMSL DGT KMSKS  +D SRINLLD PE I  KIKRCKTD   GLE+DNP RPEC NLL +Y  +++   KTKE ++ E +GM WG FKPLL++  V  L+PIQ +Y+E+M++ +++E +L  G   A+A+A+QTL   K A+G+
Sbjct:    3 KQRVLSGVQPTGNLHLGNYLGAINNWVQIQQNYDNFFCVVDLHAITVPHNPKTLAQDTYTIAALYLACGIDLEYSTIFVQSHVTAHSELAWLLNCITPLNWLERMIQFKEKAVKQGENVSVGLLDYPVLMAADILLYDADRVPVGEDQKQHLELTRDIAARFNDQFANPE---NPVLKVPEPLIRSEGARVMSLTDGTRKMSKSDPSDMSRINLLDPPELIEKKIKRCKTDPIRGLEFDNPERPECNNLLGLYGLLSQ---KTKEEVILECQGMGWGKFKPLLSETTVEALKPIQVKYQEIMDNKDYLESVLRGGKEKAEAVANQTLDRVKAALGY 332          
BLAST of NO01G05130 vs. NCBI_GenBank
Match: WP_106456126.1 (tryptophan--tRNA ligase [Aphanothece hegewaldii] >PSF38161.1 tryptophan--tRNA ligase [Aphanothece hegewaldii CCALA 016])

HSP 1 Score: 442.6 bits (1137), Expect = 1.400e-120
Identity = 214/338 (63.31%), Postives = 264/338 (78.11%), Query Frame = 0
Query:   99 KRVLSGVQPTGSLHLGNYLGAIRQWVKNQDEYESLFCVVDLHAITAPHDPKRLRQETIEAAALYLAAGIDPSKSTVFVQSHVLAHTELTWLLNCVTPMNWLERMIQFKEKAVKQGENVGVGLFDYPVLMAADILLYQAELVPVGEDQRQHLELTRDIARRFNDQFCNKKAKRRKVFRDPEALIVKEGARVMSLLDGTSKMSKSAENDGSRINLLDSPETIRNKIKRCKTDMSVGLEWDNPARPECTNLLNIYLAVTEKEGKTKESILEEVEGMNWGAFKPLLADAVVAHLEPIQRRYREVMEDPEHIEGILTRGAADADAIASQTLQWAKDAMGFYSL 437
            +RVLSGVQPTG+LHLGNYLGAIR WV+ Q EYES FCVVDLHAIT PHDPK L Q+T + AALYLA GID   ST+FVQSHV AH+EL WLLNC+TP+NWLERMIQFKEKA+KQGENV VGL +YPVLMAADILLY A+ VPVGEDQ+QHLELTRDIA R ND++  +K     V + PE +I KEGARVMSL DGTSKMSKS  ++ SRINLLD+P+ I+ KIKRCKTD+  GL +D+P RPEC NLL +YL ++   GKTKE ++ E + M WG FKPLL D  +A L+PIQ +Y E+++D  +++ +L  G   A+ +A++TL   ++A+G+  L
Sbjct:    4 QRVLSGVQPTGNLHLGNYLGAIRNWVEIQQEYESFFCVVDLHAITVPHDPKTLAQDTYKIAALYLACGIDLQYSTIFVQSHVTAHSELAWLLNCITPLNWLERMIQFKEKAIKQGENVSVGLLNYPVLMAADILLYNADKVPVGEDQKQHLELTRDIAVRVNDKYGTRK---NPVLKMPEPMIAKEGARVMSLTDGTSKMSKSDPSEMSRINLLDTPDVIQKKIKRCKTDLVKGLTFDDPERPECNNLLTLYLLLS---GKTKEEVIAECQDMGWGQFKPLLTDTAIAALKPIQDKYYEIIDDQGYLQSVLREGRFKAETVANETLSRVRNALGYLPL 335          
BLAST of NO01G05130 vs. NCBI_GenBank
Match: PSO48328.1 (tryptophan--tRNA ligase [Cyanobacteria bacterium SW_9_44_58])

HSP 1 Score: 442.6 bits (1137), Expect = 1.400e-120
Identity = 217/335 (64.78%), Postives = 262/335 (78.21%), Query Frame = 0
Query:   99 KRVLSGVQPTGSLHLGNYLGAIRQWVKNQDEYESLFCVVDLHAITAPHDPKRLRQETIEAAALYLAAGIDPSKSTVFVQSHVLAHTELTWLLNCVTPMNWLERMIQFKEKAVKQGENVGVGLFDYPVLMAADILLYQAELVPVGEDQRQHLELTRDIARRFNDQFCNKKAKRRKVFRDPEALIVKEGARVMSLLDGTSKMSKSAENDGSRINLLDSPETIRNKIKRCKTDMSVGLEWDNPARPECTNLLNIYLAVTEKEGKTKESILEEVEGMNWGAFKPLLADAVVAHLEPIQRRYREVMEDPEHIEGILTRGAADADAIASQTLQWAKDAMGF 434
            +R+LSGVQPTG+LHLGNYLGAIR WV+ Q EY++ FCVVDLHAIT PHDPK L Q+T   AALYLA GID S ST+FVQSHV AH+EL WLLNC+TP+NWLERMIQFKEKAVKQG+NV  GL DYPVLMA+DILLY+A+ VPVGEDQ+QHLELTR+IA+R NDQF  K    + VF+ P+ LI  EGARVMSLLDGT KMSKS  ++ SRINLLDSP+ I+ KIKRCKTD   GL +D+P RPEC NLL +Y+ ++   GKTK+++ EE + M WG FKPLL DA V  L PIQ +Y+++M +  +++ IL  G   A AIA QTL   KDA+G+
Sbjct:    3 QRILSGVQPTGNLHLGNYLGAIRNWVETQQEYDNFFCVVDLHAITVPHDPKTLAQDTYTIAALYLACGIDLSYSTIFVQSHVSAHSELAWLLNCITPLNWLERMIQFKEKAVKQGDNVSAGLLDYPVLMASDILLYEADKVPVGEDQKQHLELTRNIAQRTNDQFGKKD---QPVFKLPDPLIRNEGARVMSLLDGTKKMSKSDPSEMSRINLLDSPDDIKKKIKRCKTDPVKGLSFDDPERPECDNLLTLYMLLS---GKTKKAVAEECQDMGWGQFKPLLTDAAVETLRPIQEKYQQLMTEKGYLDSILKEGQEKASAIAQQTLSRVKDALGY 331          
BLAST of NO01G05130 vs. NCBI_GenBank
Match: WP_013323588.1 (tryptophan--tRNA ligase [Cyanothece sp. PCC 7822] >ADN15519.1 tryptophanyl-tRNA synthetase [Cyanothece sp. PCC 7822])

HSP 1 Score: 440.3 bits (1131), Expect = 7.200e-120
Identity = 220/336 (65.48%), Postives = 256/336 (76.19%), Query Frame = 0
Query:   98 KKRVLSGVQPTGSLHLGNYLGAIRQWVKNQDEYESLFCVVDLHAITAPHDPKRLRQETIEAAALYLAAGIDPSKSTVFVQSHVLAHTELTWLLNCVTPMNWLERMIQFKEKAVKQGENVGVGLFDYPVLMAADILLYQAELVPVGEDQRQHLELTRDIARRFNDQFCNKKAKRRKVFRDPEALIVKEGARVMSLLDGTSKMSKSAENDGSRINLLDSPETIRNKIKRCKTDMSVGLEWDNPARPECTNLLNIYLAVTEKEGKTKESILEEVEGMNWGAFKPLLADAVVAHLEPIQRRYREVMEDPEHIEGILTRGAADADAIASQTLQWAKDAMGF 434
            K+RVLSGVQPTG+LHLGNYLGAIR WV  Q EY++ FCVVDLHAIT PHDPK+L  +T   AALYLA GID   ST+FVQSHV AH+ELTWLLNC+TP+NWLERMIQFKEKA KQGENVGVGL DYPVLMAADILLY A+ VPVGEDQ+QHLELTRDIA R NDQF    +  + V + PE LI KEGARVMSL DGTSKMSKS  +D SRINLLD PE I  KIKRCKTD   GL +D+P RPEC NLLN+Y  ++   GKTKE +  E   + WG FKPLL +AV+  L PIQ +Y E++ D  +++ +L  G   A+ +A QTL   K+A+GF
Sbjct:    3 KQRVLSGVQPTGNLHLGNYLGAIRNWVDLQHEYDNFFCVVDLHAITVPHDPKKLAHDTYNIAALYLACGIDLQYSTIFVQSHVSAHSELTWLLNCITPLNWLERMIQFKEKAKKQGENVGVGLLDYPVLMAADILLYDADKVPVGEDQKQHLELTRDIAARINDQF---GSPTQPVLKVPEPLIRKEGARVMSLTDGTSKMSKSDPSDMSRINLLDPPELIEKKIKRCKTDPVRGLTFDDPERPECNNLLNLYAILS---GKTKEEVATECGDLGWGQFKPLLTEAVINSLSPIQEKYTEIINDRGYLDSVLREGRHKANLVAHQTLTRVKEALGF 332          
BLAST of NO01G05130 vs. NCBI_GenBank
Match: EJK58329.1 (hypothetical protein THAOC_21565 [Thalassiosira oceanica])

HSP 1 Score: 439.9 bits (1130), Expect = 9.400e-120
Identity = 257/458 (56.11%), Postives = 305/458 (66.59%), Query Frame = 0
Query:   16 VSSLLMATVASVARRPAAGFASLGSCFSRAVPTIAFASFSTLSSNGRIRGNWLRPFSGRSRGFATMNSGSSSSSSAIEGGERKKRVLSGVQPTGSLHLGNYLGAIRQWVKNQDE-----------------------YESLFCVVDLHAITAPHDPKRLRQETIEAAALYLAA-----GIDPSKSTVFVQSHVLAHTELTWLLNCVTPMNWLERMIQFKEKAVKQG-ENVGVGLFDYPVLMAADILLYQAELVPVGEDQRQHLELTRDIARRFNDQFC--NKKAKRRK--------VFRDPEALIVKE-GARVMSLLDGTSKMSKSAENDGSRINLLDSPETIRNKIKRCKTDMSVGLEWDNPARPECTNLLNIYLAVTEKEGKTKESILEEVEGMNWGAFKPLLADAVVAHLEPIQRRYREVMEDPEHIEGILTRGAADADAIASQTLQWAKDAMGF 434
            VS    A +AS+  R    FA      S     +  A+       G I G   R FS  +   A + + +  S+   +   R +R+LSGVQPTGSLHLGNYLGAI+QWV+ QD                         E+ FCVVDLHAIT P DP  L + T+ +AALY+AA     GIDP KS VFVQSHV AH+EL WLLNCVTPMNWLERMIQFK+KA K G E+VGVGLF YPVLMAADI+LYQA+ VPVGEDQRQHLEL RDI RRFN+++C  N   KR K        VF +PEA+IVK  GARVMSL DGT+KMSKS   DGSRIN+LD P+ IR KIKRCKTD   G+EWDNP RPE TNLLNIY AV  + G+++E ILEEV+ M WG FKP+LA+A+VAHLEPIQ+RY EV  D +++ G+L  GA  AD IAS+TL+ AK AMGF
Sbjct:    3 VSIARTAMLASLTTRRCLAFAPSSVTTSSRARALQPAN----RLGGHITGASSRLFSTET---AEVETPAVESAEVPKKKIRTRRILSGVQPTGSLHLGNYLGAIKQWVEFQDTGKFAEAENLDGEEFKEDPNVEIVNENFFCVVDLHAITVPQDPSELEESTLASAALYIAAGNGQTGIDPKKSKVFVQSHVPAHSELAWLLNCVTPMNWLERMIQFKDKAKKAGTESVGVGLFTYPVLMAADIILYQADRVPVGEDQRQHLELARDIVRRFNNEYCKGNPYKKRCKKAGMPTYPVFTEPEAMIVKAGGARVMSLTDGTNKMSKSDPADGSRINVLDPPKVIREKIKRCKTDALPGIEWDNPDRPESTNLLNIYSAV--QPGRSREDILEEVKDMRWGDFKPVLAEAIVAHLEPIQKRYAEVRADEDYLRGVLKEGADAADEIASRTLKAAKVAMGF 451          
BLAST of NO01G05130 vs. NCBI_GenBank
Match: WP_015204129.1 (tryptophan--tRNA ligase [Crinalium epipsammum] >AFZ14022.1 tryptophanyl-tRNA synthetase [Crinalium epipsammum PCC 9333])

HSP 1 Score: 439.9 bits (1130), Expect = 9.400e-120
Identity = 218/336 (64.88%), Postives = 260/336 (77.38%), Query Frame = 0
Query:   98 KKRVLSGVQPTGSLHLGNYLGAIRQWVKNQDEYESLFCVVDLHAITAPHDPKRLRQETIEAAALYLAAGIDPSKSTVFVQSHVLAHTELTWLLNCVTPMNWLERMIQFKEKAVKQGENVGVGLFDYPVLMAADILLYQAELVPVGEDQRQHLELTRDIARRFNDQFCNKKAKRRKVFRDPEALIVKEGARVMSLLDGTSKMSKSAENDGSRINLLDSPETIRNKIKRCKTDMSVGLEWDNPARPECTNLLNIYLAVTEKEGKTKESILEEVEGMNWGAFKPLLADAVVAHLEPIQRRYREVMEDPEHIEGILTRGAADADAIASQTLQWAKDAMGF 434
            K+RVLSGVQPTG+LHLGNYLGAIR WV+NQ +YE+ FCVVDLHAITAPH+P  L  +T   AALYLA GID   S +FVQSH+ AH+ELTWLLNC+TP+NWL+ MIQFKEKA+KQGENVG GL DYPVLMAADILLYQA+ VPVGEDQ+QHLELTRDIA RFN QF    A+++ V + PE LI  EGARVMSL DGT KMSKS  ++ SRINLLDSPE I+ KIKRCKTD   GL +D+P RPEC NLL +Y+ ++   GK+K  +  E + M WG FKPLLAD  V  L+PIQ +Y+EVM+D  ++E +L  G   A+AIAS TL   K A+G+
Sbjct:    3 KQRVLSGVQPTGNLHLGNYLGAIRNWVENQSQYENYFCVVDLHAITAPHNPATLASDTYTIAALYLACGIDLQYSNIFVQSHISAHSELTWLLNCITPLNWLQDMIQFKEKAIKQGENVGTGLLDYPVLMAADILLYQADKVPVGEDQKQHLELTRDIAARFNHQF----ARKKPVLKLPEPLIRAEGARVMSLTDGTRKMSKSDPSELSRINLLDSPEEIQKKIKRCKTDPVKGLTFDDPERPECNNLLTLYMLLS---GKSKAEVATECQDMGWGQFKPLLADTAVTALKPIQDKYKEVMDDKGYLESVLRDGRQKAEAIASDTLAKVKAALGY 331          
The following BLAST results are available for this feature:
BLAST of NO01G05130 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
GAQ87790.11.000e-12164.86Tryptophanyl-tRNA synthetase [Klebsormidium nitens... [more]
XP_002183670.11.700e-12162.71predicted protein, partial [Phaeodactylum tricornu... [more]
OAE23229.12.200e-12161.84hypothetical protein AXG93_4456s1010 [Marchantia p... [more]
PTQ29626.12.200e-12161.84hypothetical protein MARPO_0137s0001 [Marchantia p... [more]
WP_085434227.11.100e-12065.18tryptophan--tRNA ligase [unicellular cyanobacteriu... [more]
WP_106456126.11.400e-12063.31tryptophan--tRNA ligase [Aphanothece hegewaldii] >... [more]
PSO48328.11.400e-12064.78tryptophan--tRNA ligase [Cyanobacteria bacterium S... [more]
WP_013323588.17.200e-12065.48tryptophan--tRNA ligase [Cyanothece sp. PCC 7822] ... [more]
EJK58329.19.400e-12056.11hypothetical protein THAOC_21565 [Thalassiosira oc... [more]
WP_015204129.19.400e-12064.88tryptophan--tRNA ligase [Crinalium epipsammum] >AF... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL005nonsL005Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR047ncniR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR091ngnoR091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK007746NSK007746Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G05130.1NO01G05130.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|551303gene_544Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100083g10gene1181Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G05130.1NO01G05130.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G05130 ID=NO01G05130|Name=NO01G05130|organism=Nannochloropsis oceanica|type=gene|length=2042bp
ACAGGACCGCGCCCCCACGACGACCAATTCCTACGCGCGTGCCCCCACAG
CCCGCAGCCTATCGACGCCTTCGAATGCCCAAAGCTGCCTTGAGTTTCCT
CCTTTTTGCGACCGTAATGGTTAGCAGCCTCCTGATGGCCACCGTGGCAA
GCGTGGCGCGACGGCCGGCGGCCGGCTTTGCCAGCCTTGGCTCGTGCTTC
AGCCGTGCTGTCCCCACGATCGCATTTGCTTCCTTCAGTACGCTCAGCAG
CAATGGTAGAATAAGAGGAAACTGGTTAAGACCCTTTTCCGGCAGGTCTC
GCGGCTTTGCCACCATGAATTCAGGCAGCAGCAGCAGCTCGAGCGCCATA
GAGGGAGGAGAACGGAAGAAGCGTGTGCTGTCAGGCGTGCAGCCCACGGG
TTCTTTACACCTGGGCAATTATCTAGGGGCCATCCGCCAGTGGGTCAAGA
ACCAGGACGAGTACGAATCCCTCTTTTGCGTTGTGGACTTGCATGCCATC
ACGgtacgtttggtggtcaggaggttaaggtcggtgagcaaaaacgaaaa
ctggatgggtcagtgtctcaatctctttcagtaccaaatctgagtctttc
cttccctcgcttattcccttcgtgccctagGCCCCACACGACCCCAAGCG
CCTCCGGCAAGAGACCATCGAAGCCGCTGCCCTGTACTTGGCCGCTGGAA
TCGATCCTTCCAAAAGCACTGTCTTTGTACAGTCCCACGTCCTGGCCCAC
ACGGAACTCACCTGGCTTCTTAACTGCGTGACGCCCATGAACTGGTTGGA
GCGGATGATTCAATTCAAAGAGAAGGCGGTCAAGCAAGGGGAAAACGTGG
GGGTGGGTCTTTTCGACTACCCCGTATTGATGGCTGCGGATATTTTGCTG
TACCAGGCGGAGCTTGTGCCGGTGGGAGAGGATCAGCGGCAGCATTTGGA
GTTGACGCGAGATATCGCTCGGCGCTTCAACGACCAGTTTTGTAATAAGA
AGGCCAAGAGGAGGAAGgtgagggcgtgtgaccatgactgtatccgttag
tgttagtgtgtgtgtgtgagagagagagagggtgtgtgtgtgtgtaaccc
tttgattgggagtggggagttgtggatggagtttagaatgcatgccactc
ctccgataatgttttgatactattaagaagggaatgaatgtcctgtcctt
tgtccacatattttctcttcctcccctcttcctcccctcctccttccctc
cctccttccattccttcctttcgtctcttcttccccccatagGTGTTTCG
TGACCCTGAAGCACTCATCGTAAAGGAAGGCGCTCGCGTAATGTCCCTCC
TAGATGGGACCAGCAAAATGAGCAAGTCGGCCGAAAACGACGGGAGTCGG
ATCAACCTCCTCGATAGCCCCGAGACGATTCGGAATAAGATTAAGCGGTG
TAAGACCGATATGTCCGTGGGCTTAGAATGGGACAATCCCGCCCGGCCCG
AATGCACCAATTTATTGAACATTTATCTGGCGGTGACCGAGAAGGAGGGG
AAGACAAAGGAAAGTATATTAGAGGAGGTAGAGGGAATGAACTGGGGTGC
GTTTAAGCCCTTGTTGGCGGACGCAGTGGTGGCCCATTTGGAGCCGATCC
AGAGGCGGTATAGGGAAGTGATGGAGGATCCGGAGCACATCGAGGGAATA
TTGACGAGGGGGGCGGCAGATGCGGACGCCATTGCGAGCCAGACGCTCCA
ATGGGCCAAGGATGCAATGGGATTTTATTCCCTTGGGCGGAAGTAGAGGG
AGGTAGGTAGGTAGGTAGGTAGGTAGGTAGGTGGTTCATGGGACGGTGCG
TCAATGAAAATGAGGAAAAGAAAGCAGGAGCGCGGGTGTTGAGGGGGGGA
TGGAGGGAGAGAAGGATGGAGAGGTTCTGACTTGGACACGGAAAGAAACG
TGCATATGGTGGCTATTTACGTGATGGGAGGATATCATGCATGGACCTCA
ATAAATAAAACACTATTCAGTAATTGAAGCCGTCCAAATGAT
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protein sequence of NO01G05130.1

>NO01G05130.1-protein ID=NO01G05130.1-protein|Name=NO01G05130.1|organism=Nannochloropsis oceanica|type=polypeptide|length=440bp
MPKAALSFLLFATVMVSSLLMATVASVARRPAAGFASLGSCFSRAVPTIA
FASFSTLSSNGRIRGNWLRPFSGRSRGFATMNSGSSSSSSAIEGGERKKR
VLSGVQPTGSLHLGNYLGAIRQWVKNQDEYESLFCVVDLHAITAPHDPKR
LRQETIEAAALYLAAGIDPSKSTVFVQSHVLAHTELTWLLNCVTPMNWLE
RMIQFKEKAVKQGENVGVGLFDYPVLMAADILLYQAELVPVGEDQRQHLE
LTRDIARRFNDQFCNKKAKRRKVFRDPEALIVKEGARVMSLLDGTSKMSK
SAENDGSRINLLDSPETIRNKIKRCKTDMSVGLEWDNPARPECTNLLNIY
LAVTEKEGKTKESILEEVEGMNWGAFKPLLADAVVAHLEPIQRRYREVME
DPEHIEGILTRGAADADAIASQTLQWAKDAMGFYSLGRK*
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Synonyms
Publications