NO01G05130, NO01G05130 (gene) Nannochloropsis oceanica

Overview
NameNO01G05130
Unique NameNO01G05130
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2042
Alignment locationchr1:1363202..1365243 -

Link to JBrowse

Properties
Property NameValue
DescriptionTryptophanyl-trna synthetase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:1363202..1365243 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006418tRNA aminoacylation for protein translation
GO:0006436tryptophanyl-tRNA aminoacylation
GO:0006412translation
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004812aminoacyl-tRNA ligase activity
GO:0005524ATP binding
GO:0004830tryptophan-tRNA ligase activity
GO:0000166nucleotide binding
GO:0003824catalytic activity
GO:0000166nucleotide binding
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: INTERPRO
TermDefinition
IPR002305aa-tRNA-synth_Ic
IPR002306Trp-tRNA-ligase
Homology
BLAST of NO01G05130 vs. NCBI_GenBank
Match: EWM29460.1 (tryptophanyl-trna synthetase [Nannochloropsis gaditana])

HSP 1 Score: 676.0 bits (1743), Expect = 7.800e-191
Identity = 355/442 (80.32%), Postives = 374/442 (84.62%), Query Frame = 0
Query:    1 MPKAALSFLLFATVMVSSLLMATVASVARRPAAGFASLGSCFSRAVPTIAFASFSTLSSNGRIRGNWLRPFSGRSRGFATMNSGSSSSSS---AIEGGERKKRVLSGVQPTGSLHLGNYLGAIRQWVKNQDEYESLFCVVDLHAITAPHDPKRLRQETIEAAALYLAAGIDPSKSTVFVQSHVLAHTELTWLLNCVTPMNWLERMIQFKEKAVKQGENVGVGLFDYPVLMAADILLYQAELVPVGEDQRQHLELTRDIARRFNDQFCNKKAKRRKVFRDPEALIVKEGARVMSLLDGTSKMSKSAENDGSRINLLDSPETIRNKIKRCKTDMSVGLEWDNPARPECTNLLNIYLAVTEKEGKTKESILEEVEGMNWGAFKPLLADAVVAHLEPIQRRYREVMEDPEHIEGILTRGAADADAIASQTLQWAKDAMGFYSLGRK 440
            M K A     F   M+ SL+ AT A +    AA  A   S      PT+AFAS  TLSS  R      R   GR  G ATM +  + S++   A +  ER+KRVLSGVQPTGSLHLGNYLGAIRQWVKNQDEYES FCVVDLHAITAPHDPKRLRQETIEAAALYLAAGIDPSKST+FVQSHVLAHTELTWLLNCVTPMNWLERMIQFKEKA+KQGENVGVGLFDYP+LMAADILLYQA+LVPVGEDQRQHLELTRDIARRFNDQFCNKKAKRRKVFRDP ALIV EGARVMSLLDGTSKMSKSAENDGSRINLLDSP+TIR KIKRCKTD S+GLEWDNPARPECTNLLNIYLAVTE  G TKES+LEEV GMNWGAFKPLL +AVVAHLEPIQR+YREVMEDPEHIE ILTRGA DADAIASQTL WAKDAMGFYSLGRK
Sbjct:    1 MLKVASHSFFFKAFMIGSLIRATAAEIFHTSAA-CALRASHACHLSPTLAFASLKTLSSTSR------RRRIGRYGGMATMEASGTDSAAPGKAEQQPERRKRVLSGVQPTGSLHLGNYLGAIRQWVKNQDEYESFFCVVDLHAITAPHDPKRLRQETIEAAALYLAAGIDPSKSTIFVQSHVLAHTELTWLLNCVTPMNWLERMIQFKEKAIKQGENVGVGLFDYPILMAADILLYQADLVPVGEDQRQHLELTRDIARRFNDQFCNKKAKRRKVFRDPAALIVTEGARVMSLLDGTSKMSKSAENDGSRINLLDSPDTIRAKIKRCKTDASLGLEWDNPARPECTNLLNIYLAVTEGAGATKESVLEEVAGMNWGAFKPLLTEAVVAHLEPIQRKYREVMEDPEHIEKILTRGATDADAIASQTLGWAKDAMGFYSLGRK 435          
BLAST of NO01G05130 vs. NCBI_GenBank
Match: XP_005855599.1 (tryptophanyl-tRNA synthetase, partial [Nannochloropsis gaditana CCMP526] >EKU20762.1 tryptophanyl-tRNA synthetase, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 622.5 bits (1604), Expect = 1.000e-174
Identity = 328/414 (79.23%), Postives = 347/414 (83.82%), Query Frame = 0
Query:    1 MPKAALSFLLFATVMVSSLLMATVASVARRPAAGFASLGSCFSRAVPTIAFASFSTLSSNGRIRGNWLRPFSGRSRGFATMNSGSSSSSS---AIEGGERKKRVLSGVQPTGSLHLGNYLGAIRQWVKNQDEYESLFCVVDLHAITAPHDPKRLRQETIEAAALYLAAGIDPSKSTVFVQSHVLAHTELTWLLNCVTPMNWLERMIQFKEKAVKQGENVGVGLFDYPVLMAADILLYQAELVPVGEDQRQHLELTRDIARRFNDQFCNKKAKRRKVFRDPEALIVKEGARVMSLLDGTSKMSKSAENDGSRINLLDSPETIRNKIKRCKTDMSVGLEWDNPARPECTNLLNIYLAVTEKEGKTKESILEEVEGMNWGAFKPLLADAVVAHLEPIQRRYREVMEDPEHIEGILTR 412
            M K A     F   M+ SL+ AT A +    AA  A   S      PT+AFAS  TLSS  R      R   GR  G ATM +  + S +   A +  ER+KRVLSGVQPTGSLHLGNYLGAIRQWVKNQDEYES FCVVDLHAITAPHDPKRLRQETIEAAALYLAAGI+PSKST+FVQSHVLAHTELTWLLNCVTPMNWLERMIQFKEKA+KQGENVGVGLFDYP+LMAADILLYQA+LVPVGEDQRQHLELTRDIARRFNDQFCNKKAKRRKVFRDP ALIV EGARVMSLLDGTSKMSKSAENDGSRINLLDSP+TIR KIKRCKTD S+GLEWDNPARPECTNLLNIYLAVTE  G TKES+LEEV GMNWGAFKPLL +AVVAHLEPIQR+YREVMEDPEHIE ILTR
Sbjct:    1 MLKVASHSFFFKAFMIGSLIRATAAEIFHTSAA-CALRASHACHLSPTLAFASLKTLSSTSR------RRRIGRYGGMATMEASGTDSGAPGKAEQQPERRKRVLSGVQPTGSLHLGNYLGAIRQWVKNQDEYESFFCVVDLHAITAPHDPKRLRQETIEAAALYLAAGIEPSKSTIFVQSHVLAHTELTWLLNCVTPMNWLERMIQFKEKAIKQGENVGVGLFDYPILMAADILLYQADLVPVGEDQRQHLELTRDIARRFNDQFCNKKAKRRKVFRDPAALIVTEGARVMSLLDGTSKMSKSAENDGSRINLLDSPDTIRAKIKRCKTDASLGLEWDNPARPECTNLLNIYLAVTEGAGATKESVLEEVAGMNWGAFKPLLTEAVVAHLEPIQRKYREVMEDPEHIEKILTR 407          
BLAST of NO01G05130 vs. NCBI_GenBank
Match: CBJ29491.1 (tryptophanyl-tRNA synthetase [Ectocarpus siliculosus])

HSP 1 Score: 491.9 bits (1265), Expect = 2.100e-135
Identity = 251/380 (66.05%), Postives = 291/380 (76.58%), Query Frame = 0
Query:   67 WLRPFSGRSRGFATMNSGSSS---SSSAIEGGER-------KKRVLSGVQPTGSLHLGNYLGAIRQWVKNQDEYESLFCVVDLHAITAPHDPKRLRQETIEAAALYLAAGIDPSKSTVFVQSHVLAHTELTWLLNCVTPMNWLERMIQFKEKAVKQGENVGVGLFDYPVLMAADILLYQAELVPVGEDQRQHLELTRDIARRFNDQFCNKKAKRRKVFRDPEALIVKEGARVMSLLDGTSKMSKSAENDGSRINLLDSPETIRNKIKRCKTDMSVGLEWDNPARPECTNLLNIYLAVTEKEGKTKESILEEVEGMNWGAFKPLLADAVVAHLEPIQRRYREVMEDPEHIEGILTRGAADADAIASQTLQWAKDAMGFYSL 437
            WLR   G+ RG A M S S+S   SS+ +  G+        KKR++SGVQPTG+LH GNYLGAI+QWV NQD+Y++ F VVDLHAIT P DPK L+   I AAA YLAAGIDP KS VFVQSHV AH ELTWLL C TP+NWLE+MIQFKEK  KQGENVG GL  YPVLMA+DILLY+ +LVPVGEDQRQHLELTRD+ARRFNDQFC    +RRK F+DP+ALIVKEGARVMSL DGTSKMSKS   +GSRINL DSP+ I  K++RCKTDM  GLEWDNP RPECTNLL IY AVT   GKT+E +  EV  M+WG FKPLLADA V HL P+Q RY++++ED  ++  +L  GA  AD +AS+TL WAK+AMG  SL
Sbjct:   23 WLRK-GGQQRGRAGMTSMSASEVASSTDVAPGKETSLKVPVKKRIVSGVQPTGNLHFGNYLGAIKQWVDNQDKYDNFFFVVDLHAITVPQDPKNLKAGVINAAATYLAAGIDPEKSKVFVQSHVGAHAELTWLLTCATPINWLEKMIQFKEKKTKQGENVGTGLLTYPVLMASDILLYRPDLVPVGEDQRQHLELTRDLARRFNDQFCK---RRRKTFKDPQALIVKEGARVMSLTDGTSKMSKSDPVEGSRINLTDSPDVIAKKLRRCKTDMHQGLEWDNPDRPECTNLLTIYQAVT---GKTREEVSLEVGDMSWGTFKPLLADATVEHLRPLQARYKDILEDRSYLNKVLRDGAEAADEVASETLGWAKEAMGISSL 395          
BLAST of NO01G05130 vs. NCBI_GenBank
Match: XP_005830123.1 (hypothetical protein GUITHDRAFT_73319 [Guillardia theta CCMP2712] >EKX43143.1 hypothetical protein GUITHDRAFT_73319 [Guillardia theta CCMP2712])

HSP 1 Score: 488.8 bits (1257), Expect = 1.800e-134
Identity = 242/341 (70.97%), Postives = 280/341 (82.11%), Query Frame = 0
Query:   98 KKRVLSGVQPTGSLHLGNYLGAIRQWVKNQDEYESLFCVVDLHAITAPHDPKRLRQETIEAAALYLAAGIDPSKSTVFVQSHVLAHTELTWLLNCVTPMNWLERMIQFKEKAVKQGENVGVGLFDYPVLMAADILLYQAELVPVGEDQRQHLELTRDIARRFNDQFCNKK---AKRRKVFRDPEALIVKEGARVMSLLDGTSKMSKSAENDGSRINLLDSPETIRNKIKRCKTDMSVGLEWDNPARPECTNLLNIYLAVTEKEGKTKESILEEVEGMNWGAFKPLLADAVVAHLEPIQRRYREVMEDPEHIEGILTRGAADADAIASQTLQWAKDAMGFYS 436
            +KRVLSGVQPTG+LHLGNYLGAIRQWVKNQDEYE+ FCVVDLHAITAPH P  L++ +++ AALYLA+GIDP+KS VF+QSHV AH EL WLLNCVTPMNW+E+MIQ+KEKA KQGE+V +GLFDYP+LMAADILLYQA+LVPVGEDQRQHLEL RDIARRFNDQ+C KK   AK R+VFR+PEALIVKEGARVMSL DGTSKMSKS  +D SRINLLD PE I  +I           EWDNP RPECTNLLNIY +VT   GK+KE IL EV+ M WG FKPLL++AV+AHL PIQ +Y+++MED  +++ +L  GA  AD IA QTL W K+AMGF S
Sbjct:   20 RKRVLSGVQPTGNLHLGNYLGAIRQWVKNQDEYENYFCVVDLHAITAPHVPSELQKSSLDIAALYLASGIDPAKSKVFIQSHVPAHAELCWLLNCVTPMNWMEKMIQYKEKAKKQGESVSIGLFDYPILMAADILLYQAQLVPVGEDQRQHLELARDIARRFNDQYCKKKSMPAKGRRVFREPEALIVKEGARVMSLQDGTSKMSKSDPSDLSRINLLDPPEVIGGRI-----------EWDNPERPECTNLLNIYQSVT---GKSKEDILSEVQHMQWGQFKPLLSEAVIAHLAPIQVKYKDLMEDQTYLKQVLLDGANSADLIAGQTLSWTKNAMGFTS 346          
BLAST of NO01G05130 vs. NCBI_GenBank
Match: XP_009039593.1 (hypothetical protein AURANDRAFT_70285 [Aureococcus anophagefferens] >EGB05754.1 hypothetical protein AURANDRAFT_70285 [Aureococcus anophagefferens])

HSP 1 Score: 477.6 bits (1228), Expect = 4.100e-131
Identity = 236/335 (70.45%), Postives = 276/335 (82.39%), Query Frame = 0
Query:   98 KKRVLSGVQPTGSLHLGNYLGAIRQWVKNQDEYESLFCVVDLHAITAPHDPKRLRQETIEAAALYLAAGIDPSKSTVFVQSHVLAHTELTWLLNCVTPMNWLERMIQFKEKAVKQGENVGVGLFDYPVLMAADILLYQAELVPVGEDQRQHLELTRDIARRFNDQFCNKKAKRRKVFRDPEALIVKEGARVMSLLDGTSKMSKSAENDGSRINLLDSPETIRNKIKRCKTDMSVGLEWDNPARPECTNLLNIYLAVTEKEGKTKESILEEVEGMNWGAFKPLLADAVVAHLEPIQRRYREVMEDPEHIEGILTRGAADADAIASQTLQWAKDAMG 433
            ++RVLSGVQPTGSLHLGNYLGAIRQWV+ Q EY+SLFCVVDLHAIT PHD K L +ET++AAALY+AAG++P  + +FVQSHV AH EL WLLNC+TPMNWLERMIQ+KEK  KQGENV VGLFDYPVLMAADILLYQA+LVPVGEDQRQHLELTRDIARRF+D +C +K   R+VFR+P+ALIVKEGARVMSL DG +KMSKSA  DGSRINL+DSP+ I +KIK+CKTD   GLEWDNP RPE TNLLNIY +VT   G  +E IL +V  ++WGAFKP L DA++AHL+PIQR Y+E+  D   +   L +GA  AD IA++TL  AK AMG
Sbjct:    7 RERVLSGVQPTGSLHLGNYLGAIRQWVEYQHEYDSLFCVVDLHAITMPHDAKSLSRETLDAAALYIAAGVEPDIAPIFVQSHVSAHAELAWLLNCMTPMNWLERMIQYKEKKQKQGENVAVGLFDYPVLMAADILLYQADLVPVGEDQRQHLELTRDIARRFHDLYCKRK---RRVFREPKALIVKEGARVMSLADGKAKMSKSAPIDGSRINLVDSPDLIASKIKKCKTDQLKGLEWDNPNRPEATNLLNIYQSVT---GLEREVILRDVSDLSWGAFKPRLTDAIIAHLDPIQRAYKELAADQLFLSQTLKQGAHRADEIATKTLDDAKGAMG 335          
BLAST of NO01G05130 vs. NCBI_GenBank
Match: CEL99506.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 476.5 bits (1225), Expect = 9.000e-131
Identity = 237/375 (63.20%), Postives = 299/375 (79.73%), Query Frame = 0
Query:   63 IRGNWLRPFSGRSRGFATMNSGSSSSSSAIEGGERKKRVLSGVQPTGSLHLGNYLGAIRQWVKNQDEYESLFCVVDLHAITAPHDPKRLRQETIEAAALYLAAGIDPSKSTVFVQSHVLAHTELTWLLNCVTPMNWLERMIQFKEKAVK-QGENVGVGLFDYPVLMAADILLYQAELVPVGEDQRQHLELTRDIARRFNDQFCNKKAKRRKVFRDPEALIVKEGARVMSLLDGTSKMSKSAENDGSRINLLDSPETIRNKIKRCKTDMSVGLEWDNPARPECTNLLNIYLAVTEKEGKTKESILEEVEGMNWGAFKPLLADAVVAHLEPIQRRYREVMEDPEHIEGILTRGAADADAIASQTLQWAKDAMGFYSL 437
            IR +  RP +  S   A   +  ++  S +    +++RVLSG+QPTG+LHLGNY+GAIRQWVKNQD+Y+S FC VDLHAIT PH P +LRQET++A ALY+A GIDP +S+VFVQSHV AHTELTWLLNC+TP+ WLERMIQFKEK+ K   EN+GVGLF YPVLMA+DILLY+AE+VPVGEDQ QH+ELTRD+ARRFND FC K+ +R+ VF +PE L+VKEGARVMSLLDGT+KMSKS  N+GSRINLLD+PETI+ KIK+CKTD   GLE+ NP RPECTNLL +  A+++   +  ++IL++   + WGAFKP+L DA+V HL PIQ+RYR ++ DP +++ IL +GA  A+A+ASQTL  AKDAMG+ SL
Sbjct:   67 IRRSLTRPRA--SVATAEPEAAVAAEQSDLPSVAKRQRVLSGIQPTGALHLGNYVGAIRQWVKNQDKYDSFFCAVDLHAITLPHTPSKLRQETLQATALYVACGIDPDRSSVFVQSHVPAHTELTWLLNCITPVGWLERMIQFKEKSRKLSAENIGVGLFGYPVLMASDILLYKAEVVPVGEDQVQHIELTRDVARRFNDLFC-KRQRRKDVFVEPETLLVKEGARVMSLLDGTAKMSKSDPNEGSRINLLDTPETIQKKIKKCKTDPVQGLEYGNPDRPECTNLLTMLSAISD---QPVDAILQQYGDLGWGAFKPVLTDALVEHLGPIQQRYRNLVSDPSYLQSILRQGAEKANAVASQTLSEAKDAMGYLSL 435          
BLAST of NO01G05130 vs. NCBI_GenBank
Match: GAX21044.1 (tryptophanyl-tRNA synthetase [Fistulifera solaris])

HSP 1 Score: 474.9 bits (1221), Expect = 2.600e-130
Identity = 254/394 (64.47%), Postives = 290/394 (73.60%), Query Frame = 0
Query:   68 LRPFSG---RSRGFATMNSGSSSSSSAIEGGERK---KRVLSGVQPTGSLHLGNYLGAIRQWVKNQD------------EYESLFCVVDLHAITAPHDPKRLRQETIEAAALYLAAGIDPSKSTVFVQSHVLAHTELTWLLNCVTPMNWLERMIQFKEKAVKQGENVGVGLFDYPVLMAADILLYQAELVPVGEDQRQHLELTRDIARRFNDQFC--NKKAK--------RRKVFRDPEALIVKEGARVMSLLDGTSKMSKSAENDGSRINLLDSPETIRNKIKRCKTDMSVGLEWDNPARPECTNLLNIYLAVTEKEGKTKESILEEVEGMNWGAFKPLLADAVVAHLEPIQRRYREVMEDPEHIEGILTRGAADADAIASQTLQWAKDAMGF 434
            +RP  G   R   F   ++ +S+ SSA  G   K   KRVLSGVQPTGSLHLGNYLGAIRQWV+ QD            + E+ FCVVDLHAIT PHDP  L + T+ +AALYLAAGIDPSKS VFVQSHV AH ELTWLLNC+TPMNWLERMIQFKEKA KQGE+VGVGLFDYPVLMAADILLYQA+ +PVGEDQRQHLEL RDI+RRF+D FC  NK  K         R VF +P A+IVK GAR+MSL DG SKMSKS  ND SRIN+LD P+ IR KIK+CKTD  VGLEWDNP RPE TNLL I+ AV  + G+T+E IL EV  M WG FKP+LADA+V HL PIQ RY+ + ED E++  +L  GA  AD IAS+TL+ AK AMGF
Sbjct:   17 VRPHRGLISRHSPFLLHSTATSADSSATAGSAPKTRIKRVLSGVQPTGSLHLGNYLGAIRQWVEFQDNAETQDEEGNLIQTENFFCVVDLHAITMPHDPTELTESTLSSAALYLAAGIDPSKSRVFVQSHVTAHAELTWLLNCITPMNWLERMIQFKEKARKQGESVGVGLFDYPVLMAADILLYQADQIPVGEDQRQHLELARDISRRFHDLFCKGNKYKKLCKAAGVPSRPVFVEPNAMIVKSGARIMSLSDGNSKMSKSDPNDASRINILDPPDVIREKIKKCKTDAQVGLEWDNPDRPEATNLLTIFQAV--QPGRTREDILNEVRDMTWGQFKPVLADAIVNHLGPIQERYKAIREDDEYLWQVLKDGADAADEIASRTLKHAKIAMGF 408          
BLAST of NO01G05130 vs. NCBI_GenBank
Match: GAX12351.1 (tryptophanyl-tRNA synthetase [Fistulifera solaris])

HSP 1 Score: 473.0 bits (1216), Expect = 1.000e-129
Identity = 258/410 (62.93%), Postives = 295/410 (71.95%), Query Frame = 0
Query:   49 IAFASFSTLSSNGRIRGNWLRPFSGRSRGFATMNSGSSSSSSAIEGGERK---KRVLSGVQPTGSLHLGNYLGAIRQWVKNQD------------EYESLFCVVDLHAITAPHDPKRLRQETIEAAALYLAAGIDPSKSTVFVQSHVLAHTELTWLLNCVTPMNWLERMIQFKEKAVKQGENVGVGLFDYPVLMAADILLYQAELVPVGEDQRQHLELTRDIARRFNDQFC--NKKAK--------RRKVFRDPEALIVKEGARVMSLLDGTSKMSKSAENDGSRINLLDSPETIRNKIKRCKTDMSVGLEWDNPARPECTNLLNIYLAVTEKEGKTKESILEEVEGMNWGAFKPLLADAVVAHLEPIQRRYREVMEDPEHIEGILTRGAADADAIASQTLQWAKDAMGF 434
            +AF   ST  S   +R +  R    R   F   ++ +S+ SSA      K   KRVLSGVQPTGSLHLGNYLGAIRQWV+ QD              E+ FCVVDLHAIT PHDP  L + T+ +AALYLAAGIDPSKS VFVQSHV AH ELTWLLNC+TPMNWLERMIQFKEKA KQGE+VGVGLFDYPVLMAADILLYQA+ +PVGEDQRQHLEL RDI+RRF+D FC  NK  K         R VF +P A+IVK GAR+MSL DG SKMSKS  ND SRIN+LD P+ IR KIK+CKTD  VGLEWDNP RPE TNLL I+ AV  + G+T+E IL EV  M WG FKP+LADA+V HLEPIQ RY+ + ED E++  +L  GA  AD IAS+TL+ AK AMGF
Sbjct:   16 VAFLRKSTAFSPLAVRTH--RGLIARQSPFLLHSTATSADSSAPADSAPKTRIKRVLSGVQPTGSLHLGNYLGAIRQWVEFQDNAETQDEEGNLIRTENFFCVVDLHAITMPHDPTELTESTLSSAALYLAAGIDPSKSRVFVQSHVTAHAELTWLLNCITPMNWLERMIQFKEKARKQGESVGVGLFDYPVLMAADILLYQADQIPVGEDQRQHLELARDISRRFHDLFCKGNKYKKLCKAAGVPSRPVFVEPNAMIVKSGARIMSLSDGNSKMSKSDPNDASRINILDPPDVIREKIKKCKTDAQVGLEWDNPDRPEATNLLTIFQAV--QPGRTREDILNEVGDMTWGQFKPVLADAIVNHLEPIQERYKAIREDDEYLWQVLKDGADAADEIASRTLKHAKIAMGF 421          
BLAST of NO01G05130 vs. NCBI_GenBank
Match: XP_009041984.1 (hypothetical protein AURANDRAFT_39388 [Aureococcus anophagefferens] >EGB03304.1 hypothetical protein AURANDRAFT_39388 [Aureococcus anophagefferens])

HSP 1 Score: 469.9 bits (1208), Expect = 8.500e-129
Identity = 238/361 (65.93%), Postives = 282/361 (78.12%), Query Frame = 0
Query:   72 SGRSRGFATMNSGSSSSSSAIEGGERKKRVLSGVQPTGSLHLGNYLGAIRQWVKNQDEYESLFCVVDLHAITAPHDPKRLRQETIEAAALYLAAGIDPSKSTVFVQSHVLAHTELTWLLNCVTPMNWLERMIQFKEKAVKQGENVGVGLFDYPVLMAADILLYQAELVPVGEDQRQHLELTRDIARRFNDQFCNKKAKRRKVFRDPEALIVKEGARVMSLLDGTSKMSKSAENDGSRINLLDSPETIRNKIKRCKTDMSVGLEWDNPARPECTNLLNIYLAVTEKEGKTKESILEEVEGMNWGAFKPLLADAVVAHLEPIQRRYREVMEDPEHIEGILTRGAADADAIASQTLQWAKDAMG 433
            +GR    +  ++   +S ++ E   R++RVLSGVQPTGSLHLGNYLGAIRQWV+ Q EY+SLFCVVD+HAIT PHD K L  ET++AAALY+AAG+DP  + +FVQSHV AH EL WLLNC+TP+NWLERMIQ+KEK  KQGE V VGLFDYPVLMAADILLYQA LVPVG+DQRQHLELTRDIARRF+D +C +K   ++VFR+P+ALIVKEG+RVMSL DGT KMSKSA  D SRINL D P+ I +KIK+CKTD   GLEWDNP RPE  NLLNIY +VT   G   E+IL EV  ++WGAFKP L DAVVAHLEPIQR Y+E+  D  ++   L +GA  AD IA++TL  AK AMG
Sbjct:   27 AGRGVSQSRSSTFVRASDASSEANLRRQRVLSGVQPTGSLHLGNYLGAIRQWVEYQHEYDSLFCVVDMHAITVPHDAKTLSSETMDAAALYIAAGVDPDIAPIFVQSHVSAHAELAWLLNCITPINWLERMIQYKEKKEKQGELVAVGLFDYPVLMAADILLYQAGLVPVGDDQRQHLELTRDIARRFHDMYCKRK---QRVFREPKALIVKEGSRVMSLTDGTVKMSKSAPLDNSRINLSDPPDLIASKIKKCKTDQVKGLEWDNPDRPEAANLLNIYQSVT---GLEHEAILREVSDLSWGAFKPRLTDAVVAHLEPIQRAYKEIAADQHYLSQTLKQGAYRADEIATRTLDDAKSAMG 381          
BLAST of NO01G05130 vs. NCBI_GenBank
Match: OEU11728.1 (tryptophanyl-tRNA synthetase [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 462.2 bits (1188), Expect = 1.800e-126
Identity = 238/358 (66.48%), Postives = 278/358 (77.65%), Query Frame = 0
Query:   97 RKKRVLSGVQPTGSLHLGNYLGAIRQWV--KNQDEY---------ESLFCVVDLHAITAPHDPKRLRQETIEAAALYLAAGIDPSKSTVFVQSHVLAHTELTWLLNCVTPMNWLERMIQFKEKAVKQGENVGVGLFDYPVLMAADILLYQAELVPVGEDQRQHLELTRDIARRFNDQFC--NKKAKR--------RKVFRDPEALIVKEGARVMSLLDGTSKMSKSAENDGSRINLLDSPETIRNKIKRCKTDMSVGLEWDNPARPECTNLLNIYLAVTEKEGKTKESILEEVEGMNWGAFKPLLADAVVAHLEPIQRRYREVMEDPEHIEGILTRGAADADAIASQTLQWAKDAMGF 434
            R +RVLSGVQPTGSLHLGNYLGAIRQWV  +N+D++         E+ FCVVDLHAIT PHDPK L++ T+ +AALYLAAGIDP+KS +FVQSHV AH+EL WLLNC+TPM WLERMIQFKEKA KQGE+VGVGLF YP+LMAADI+LYQ+  VPVGEDQRQHLELTRDI RRFND FC  N   KR        R VF +P+A+I+KEGARVMSL DG+SKMSKS  +D SRIN+LD P+TIR+KIKRCKTD   G+EWDNP RPE TNLLNIY AV +   +TKE IL+EV  M WG FKP++ADA+V HL PIQ RY EV  DP+ +  IL +GA  A+ +A +TL   K AMGF
Sbjct:   30 RPERVLSGVQPTGSLHLGNYLGAIRQWVDFQNEDQFNDDGEVVPVENFFCVVDLHAITMPHDPKDLQESTLSSAALYLAAGIDPTKSKIFVQSHVPAHSELAWLLNCITPMGWLERMIQFKEKAKKQGESVGVGLFSYPILMAADIMLYQSTKVPVGEDQRQHLELTRDIVRRFNDLFCKGNPYKKRCKAAGVPSRPVFVEPDAIILKEGARVMSLTDGSSKMSKSDPSDASRINVLDDPKTIRDKIKRCKTDAIPGIEWDNPDRPEATNLLNIYSAV-QPTKRTKEEILKEVGEMTWGEFKPVIADAIVNHLTPIQDRYYEVRNDPDALNEILKQGADAANEVAERTLLNTKVAMGF 386          
The following BLAST results are available for this feature:
BLAST of NO01G05130 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM29460.17.800e-19180.32tryptophanyl-trna synthetase [Nannochloropsis gadi... [more]
XP_005855599.11.000e-17479.23tryptophanyl-tRNA synthetase, partial [Nannochloro... [more]
CBJ29491.12.100e-13566.05tryptophanyl-tRNA synthetase [Ectocarpus siliculos... [more]
XP_005830123.11.800e-13470.97hypothetical protein GUITHDRAFT_73319 [Guillardia ... [more]
XP_009039593.14.100e-13170.45hypothetical protein AURANDRAFT_70285 [Aureococcus... [more]
CEL99506.19.000e-13163.20unnamed protein product [Vitrella brassicaformis C... [more]
GAX21044.12.600e-13064.47tryptophanyl-tRNA synthetase [Fistulifera solaris][more]
GAX12351.11.000e-12962.93tryptophanyl-tRNA synthetase [Fistulifera solaris][more]
XP_009041984.18.500e-12965.93hypothetical protein AURANDRAFT_39388 [Aureococcus... [more]
OEU11728.11.800e-12666.48tryptophanyl-tRNA synthetase [Fragilariopsis cylin... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL005nonsL005Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR047ncniR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR091ngnoR091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK007746NSK007746Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G05130.1NO01G05130.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|551303gene_544Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100083g10gene1181Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G05130.1NO01G05130.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G05130 ID=NO01G05130|Name=NO01G05130|organism=Nannochloropsis oceanica|type=gene|length=2042bp
ACAGGACCGCGCCCCCACGACGACCAATTCCTACGCGCGTGCCCCCACAG
CCCGCAGCCTATCGACGCCTTCGAATGCCCAAAGCTGCCTTGAGTTTCCT
CCTTTTTGCGACCGTAATGGTTAGCAGCCTCCTGATGGCCACCGTGGCAA
GCGTGGCGCGACGGCCGGCGGCCGGCTTTGCCAGCCTTGGCTCGTGCTTC
AGCCGTGCTGTCCCCACGATCGCATTTGCTTCCTTCAGTACGCTCAGCAG
CAATGGTAGAATAAGAGGAAACTGGTTAAGACCCTTTTCCGGCAGGTCTC
GCGGCTTTGCCACCATGAATTCAGGCAGCAGCAGCAGCTCGAGCGCCATA
GAGGGAGGAGAACGGAAGAAGCGTGTGCTGTCAGGCGTGCAGCCCACGGG
TTCTTTACACCTGGGCAATTATCTAGGGGCCATCCGCCAGTGGGTCAAGA
ACCAGGACGAGTACGAATCCCTCTTTTGCGTTGTGGACTTGCATGCCATC
ACGgtacgtttggtggtcaggaggttaaggtcggtgagcaaaaacgaaaa
ctggatgggtcagtgtctcaatctctttcagtaccaaatctgagtctttc
cttccctcgcttattcccttcgtgccctagGCCCCACACGACCCCAAGCG
CCTCCGGCAAGAGACCATCGAAGCCGCTGCCCTGTACTTGGCCGCTGGAA
TCGATCCTTCCAAAAGCACTGTCTTTGTACAGTCCCACGTCCTGGCCCAC
ACGGAACTCACCTGGCTTCTTAACTGCGTGACGCCCATGAACTGGTTGGA
GCGGATGATTCAATTCAAAGAGAAGGCGGTCAAGCAAGGGGAAAACGTGG
GGGTGGGTCTTTTCGACTACCCCGTATTGATGGCTGCGGATATTTTGCTG
TACCAGGCGGAGCTTGTGCCGGTGGGAGAGGATCAGCGGCAGCATTTGGA
GTTGACGCGAGATATCGCTCGGCGCTTCAACGACCAGTTTTGTAATAAGA
AGGCCAAGAGGAGGAAGgtgagggcgtgtgaccatgactgtatccgttag
tgttagtgtgtgtgtgtgagagagagagagggtgtgtgtgtgtgtaaccc
tttgattgggagtggggagttgtggatggagtttagaatgcatgccactc
ctccgataatgttttgatactattaagaagggaatgaatgtcctgtcctt
tgtccacatattttctcttcctcccctcttcctcccctcctccttccctc
cctccttccattccttcctttcgtctcttcttccccccatagGTGTTTCG
TGACCCTGAAGCACTCATCGTAAAGGAAGGCGCTCGCGTAATGTCCCTCC
TAGATGGGACCAGCAAAATGAGCAAGTCGGCCGAAAACGACGGGAGTCGG
ATCAACCTCCTCGATAGCCCCGAGACGATTCGGAATAAGATTAAGCGGTG
TAAGACCGATATGTCCGTGGGCTTAGAATGGGACAATCCCGCCCGGCCCG
AATGCACCAATTTATTGAACATTTATCTGGCGGTGACCGAGAAGGAGGGG
AAGACAAAGGAAAGTATATTAGAGGAGGTAGAGGGAATGAACTGGGGTGC
GTTTAAGCCCTTGTTGGCGGACGCAGTGGTGGCCCATTTGGAGCCGATCC
AGAGGCGGTATAGGGAAGTGATGGAGGATCCGGAGCACATCGAGGGAATA
TTGACGAGGGGGGCGGCAGATGCGGACGCCATTGCGAGCCAGACGCTCCA
ATGGGCCAAGGATGCAATGGGATTTTATTCCCTTGGGCGGAAGTAGAGGG
AGGTAGGTAGGTAGGTAGGTAGGTAGGTAGGTGGTTCATGGGACGGTGCG
TCAATGAAAATGAGGAAAAGAAAGCAGGAGCGCGGGTGTTGAGGGGGGGA
TGGAGGGAGAGAAGGATGGAGAGGTTCTGACTTGGACACGGAAAGAAACG
TGCATATGGTGGCTATTTACGTGATGGGAGGATATCATGCATGGACCTCA
ATAAATAAAACACTATTCAGTAATTGAAGCCGTCCAAATGAT
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protein sequence of NO01G05130.1

>NO01G05130.1-protein ID=NO01G05130.1-protein|Name=NO01G05130.1|organism=Nannochloropsis oceanica|type=polypeptide|length=440bp
MPKAALSFLLFATVMVSSLLMATVASVARRPAAGFASLGSCFSRAVPTIA
FASFSTLSSNGRIRGNWLRPFSGRSRGFATMNSGSSSSSSAIEGGERKKR
VLSGVQPTGSLHLGNYLGAIRQWVKNQDEYESLFCVVDLHAITAPHDPKR
LRQETIEAAALYLAAGIDPSKSTVFVQSHVLAHTELTWLLNCVTPMNWLE
RMIQFKEKAVKQGENVGVGLFDYPVLMAADILLYQAELVPVGEDQRQHLE
LTRDIARRFNDQFCNKKAKRRKVFRDPEALIVKEGARVMSLLDGTSKMSK
SAENDGSRINLLDSPETIRNKIKRCKTDMSVGLEWDNPARPECTNLLNIY
LAVTEKEGKTKESILEEVEGMNWGAFKPLLADAVVAHLEPIQRRYREVME
DPEHIEGILTRGAADADAIASQTLQWAKDAMGFYSLGRK*
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Synonyms
Publications