NO01G05070, NO01G05070 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G05070 vs. NCBI_GenBank
Match: XP_012195131.1 (hypothetical protein SPRG_01532 [Saprolegnia parasitica CBS 223.65] >KDO34396.1 hypothetical protein SPRG_01532 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 251.1 bits (640), Expect = 3.800e-63 Identity = 117/161 (72.67%), Postives = 130/161 (80.75%), Query Frame = 0 Query: 109 KREDYISWDDYFMGVAFLSAMRSKDPSTQVGACLVDTENKIVGIGYNGFPRGCSDDSLPWARHGEGGFLDTKYAYVCHAEMNAILNRNIAPLHGCRMYVALFPCNECAKLIIQSGVKDVIYVSDKYHDDAIMVASRRLFDLAGVRYRQHVPKASHITIDFS 270 KR DY+SWDDYFM VAFLSAMRSKDPSTQVGAC+V++E KIVGIGYNGFP GC DD LPWAR LDTKY YVCHAEMNAILN+N + +HGC +YVALFPCNECAKLIIQSG+K VIY SDKY DD ASRRL D+A V YRQH + +TIDF+ Sbjct: 165 KRTDYLSWDDYFMSVAFLSAMRSKDPSTQVGACIVNSEKKIVGIGYNGFPNGCDDDELPWAR-AAASPLDTKYPYVCHAEMNAILNKNSSSVHGCTIYVALFPCNECAKLIIQSGIKAVIYYSDKYKDDWKFEASRRLLDMAHVAYRQHEMSTTSLTIDFT 324
BLAST of NO01G05070 vs. NCBI_GenBank
Match: XP_020658678.1 (deoxycytidylate deaminase [Pogona vitticeps]) HSP 1 Score: 251.1 bits (640), Expect = 3.800e-63 Identity = 113/160 (70.62%), Postives = 133/160 (83.12%), Query Frame = 0 Query: 109 KREDYISWDDYFMGVAFLSAMRSKDPSTQVGACLVDTENKIVGIGYNGFPRGCSDDSLPWARHGEGGFLDTKYAYVCHAEMNAILNRNIAPLHGCRMYVALFPCNECAKLIIQSGVKDVIYVSDKYHDDAIMVASRRLFDLAGVRYRQHVPKASHITIDF 269 KREDY+ W +YFM VAFLSA RSKDP +QVGAC+V++ENKIVGIGYNG P GCSDDSLPW R G+ LDTKY YVCHAE+NAI+N+N A + GC MYVALFPCNECAKLIIQ+G+K+VI++SDKYHD M A+RRLFDLAG+ YR+ PK + I IDF Sbjct: 51 KREDYLEWPEYFMAVAFLSAQRSKDPHSQVGACIVNSENKIVGIGYNGMPNGCSDDSLPWTRIGDNK-LDTKYPYVCHAELNAIMNKNSADVKGCSMYVALFPCNECAKLIIQAGIKEVIFMSDKYHDTPEMTAARRLFDLAGIMYRKFKPKCNKIVIDF 209
BLAST of NO01G05070 vs. NCBI_GenBank
Match: XP_005989545.1 (PREDICTED: deoxycytidylate deaminase [Latimeria chalumnae]) HSP 1 Score: 250.8 bits (639), Expect = 5.000e-63 Identity = 114/160 (71.25%), Postives = 132/160 (82.50%), Query Frame = 0 Query: 109 KREDYISWDDYFMGVAFLSAMRSKDPSTQVGACLVDTENKIVGIGYNGFPRGCSDDSLPWARHGEGGFLDTKYAYVCHAEMNAILNRNIAPLHGCRMYVALFPCNECAKLIIQSGVKDVIYVSDKYHDDAIMVASRRLFDLAGVRYRQHVPKASHITIDF 269 KREDY+ W +YFM VAFLSA RSKDP++QVGAC+V+ ENKIVGIGYNG P GCSDD LPWAR LDTKY YVCHAE+NAI+N+N A + GC MYVALFPCNECAKLIIQ+G+K+VI++SDKYH M ASR LFD+AG++YRQ VPK S ITIDF Sbjct: 20 KREDYLEWPEYFMAVAFLSAQRSKDPNSQVGACIVNPENKIVGIGYNGMPNGCSDDLLPWARTAPNK-LDTKYPYVCHAELNAIMNKNSADVKGCAMYVALFPCNECAKLIIQAGIKEVIFMSDKYHSTPEMTASRLLFDMAGIKYRQFVPKVSKITIDF 178
BLAST of NO01G05070 vs. NCBI_GenBank
Match: XP_003227702.1 (PREDICTED: deoxycytidylate deaminase isoform X1 [Anolis carolinensis]) HSP 1 Score: 249.6 bits (636), Expect = 1.100e-62 Identity = 113/160 (70.62%), Postives = 132/160 (82.50%), Query Frame = 0 Query: 109 KREDYISWDDYFMGVAFLSAMRSKDPSTQVGACLVDTENKIVGIGYNGFPRGCSDDSLPWARHGEGGFLDTKYAYVCHAEMNAILNRNIAPLHGCRMYVALFPCNECAKLIIQSGVKDVIYVSDKYHDDAIMVASRRLFDLAGVRYRQHVPKASHITIDF 269 KR+DY+ W +YFM VAFLSA RSKDP +QVGAC+V++ENKIVGIGYNG P GCSDDSLPW R E LDTKY YVCHAE+NAI+N+N A + GC MYVALFPCNECAKLIIQ+G+K+VI++SDKYHD M ASRRLFDLAG+ YR+ PK + I IDF Sbjct: 24 KRDDYLEWPEYFMAVAFLSAQRSKDPHSQVGACIVNSENKIVGIGYNGMPNGCSDDSLPWTRTAESK-LDTKYPYVCHAELNAIMNKNSADVKGCSMYVALFPCNECAKLIIQAGIKEVIFMSDKYHDTPEMTASRRLFDLAGIIYRKFKPKCNKIVIDF 182
BLAST of NO01G05070 vs. NCBI_GenBank
Match: XP_003971998.1 (PREDICTED: deoxycytidylate deaminase [Takifugu rubripes]) HSP 1 Score: 249.6 bits (636), Expect = 1.100e-62 Identity = 113/161 (70.19%), Postives = 132/161 (81.99%), Query Frame = 0 Query: 109 KREDYISWDDYFMGVAFLSAMRSKDPSTQVGACLVDTENKIVGIGYNGFPRGCSDDSLPWARHGEGGFLDTKYAYVCHAEMNAILNRNIAPLHGCRMYVALFPCNECAKLIIQSGVKDVIYVSDKYHDDAIMVASRRLFDLAGVRYRQHVPKASHITIDFS 270 KREDY+ W +YFM VAFLSA RSKDPS+QVGAC+V+ E KIVGIGYNG P GC DD LPW R E LDTKY YVCHAEMNAI+N+N A + GC MYVALFPCNECAKLIIQ+G+K+VIY+SDKYH+ M+ASR+L DLAG++YRQ VPK + I IDF+ Sbjct: 19 KREDYLEWPEYFMAVAFLSAQRSKDPSSQVGACIVNQEKKIVGIGYNGMPNGCDDDLLPWCRSAE-DHLDTKYPYVCHAEMNAIMNKNSADVKGCAMYVALFPCNECAKLIIQAGLKEVIYLSDKYHNTPGMIASRKLLDLAGIQYRQFVPKRTQIVIDFN 178
BLAST of NO01G05070 vs. NCBI_GenBank
Match: XP_008119105.1 (PREDICTED: deoxycytidylate deaminase isoform X2 [Anolis carolinensis]) HSP 1 Score: 249.6 bits (636), Expect = 1.100e-62 Identity = 113/160 (70.62%), Postives = 132/160 (82.50%), Query Frame = 0 Query: 109 KREDYISWDDYFMGVAFLSAMRSKDPSTQVGACLVDTENKIVGIGYNGFPRGCSDDSLPWARHGEGGFLDTKYAYVCHAEMNAILNRNIAPLHGCRMYVALFPCNECAKLIIQSGVKDVIYVSDKYHDDAIMVASRRLFDLAGVRYRQHVPKASHITIDF 269 KR+DY+ W +YFM VAFLSA RSKDP +QVGAC+V++ENKIVGIGYNG P GCSDDSLPW R E LDTKY YVCHAE+NAI+N+N A + GC MYVALFPCNECAKLIIQ+G+K+VI++SDKYHD M ASRRLFDLAG+ YR+ PK + I IDF Sbjct: 16 KRDDYLEWPEYFMAVAFLSAQRSKDPHSQVGACIVNSENKIVGIGYNGMPNGCSDDSLPWTRTAESK-LDTKYPYVCHAELNAIMNKNSADVKGCSMYVALFPCNECAKLIIQAGIKEVIFMSDKYHDTPEMTASRRLFDLAGIIYRKFKPKCNKIVIDF 174
BLAST of NO01G05070 vs. NCBI_GenBank
Match: XP_005517703.2 (PREDICTED: deoxycytidylate deaminase isoform X2 [Pseudopodoces humilis]) HSP 1 Score: 249.6 bits (636), Expect = 1.100e-62 Identity = 112/160 (70.00%), Postives = 132/160 (82.50%), Query Frame = 0 Query: 109 KREDYISWDDYFMGVAFLSAMRSKDPSTQVGACLVDTENKIVGIGYNGFPRGCSDDSLPWARHGEGGFLDTKYAYVCHAEMNAILNRNIAPLHGCRMYVALFPCNECAKLIIQSGVKDVIYVSDKYHDDAIMVASRRLFDLAGVRYRQHVPKASHITIDF 269 KREDY+ W +YFM VAFLSA RSKDPS+QVGAC+V++ENKIVGIGYNG P GCSDD LPW R G LDTKY YVCHAE+NAI+N+N A + GC MYVALFPCNECAKLIIQ+G+K+VI++SDKYHD M A+RR+FDLAG+ YR+ PK + I IDF Sbjct: 21 KREDYLEWPEYFMAVAFLSAQRSKDPSSQVGACIVNSENKIVGIGYNGMPNGCSDDVLPWTRRG-ANRLDTKYPYVCHAELNAIMNKNSADVKGCSMYVALFPCNECAKLIIQAGIKEVIFMSDKYHDTTEMTAARRMFDLAGIIYREFKPKCNKIIIDF 179
BLAST of NO01G05070 vs. NCBI_GenBank
Match: XP_016853005.1 (PREDICTED: deoxycytidylate deaminase isoform X4 [Anolis carolinensis]) HSP 1 Score: 249.6 bits (636), Expect = 1.100e-62 Identity = 113/160 (70.62%), Postives = 132/160 (82.50%), Query Frame = 0 Query: 109 KREDYISWDDYFMGVAFLSAMRSKDPSTQVGACLVDTENKIVGIGYNGFPRGCSDDSLPWARHGEGGFLDTKYAYVCHAEMNAILNRNIAPLHGCRMYVALFPCNECAKLIIQSGVKDVIYVSDKYHDDAIMVASRRLFDLAGVRYRQHVPKASHITIDF 269 KR+DY+ W +YFM VAFLSA RSKDP +QVGAC+V++ENKIVGIGYNG P GCSDDSLPW R E LDTKY YVCHAE+NAI+N+N A + GC MYVALFPCNECAKLIIQ+G+K+VI++SDKYHD M ASRRLFDLAG+ YR+ PK + I IDF Sbjct: 24 KRDDYLEWPEYFMAVAFLSAQRSKDPHSQVGACIVNSENKIVGIGYNGMPNGCSDDSLPWTRTAESK-LDTKYPYVCHAELNAIMNKNSADVKGCSMYVALFPCNECAKLIIQAGIKEVIFMSDKYHDTPEMTASRRLFDLAGIIYRKFKPKCNKIVIDF 182
BLAST of NO01G05070 vs. NCBI_GenBank
Match: KFO65064.1 (Deoxycytidylate deaminase, partial [Corvus brachyrhynchos]) HSP 1 Score: 248.8 bits (634), Expect = 1.900e-62 Identity = 112/160 (70.00%), Postives = 132/160 (82.50%), Query Frame = 0 Query: 109 KREDYISWDDYFMGVAFLSAMRSKDPSTQVGACLVDTENKIVGIGYNGFPRGCSDDSLPWARHGEGGFLDTKYAYVCHAEMNAILNRNIAPLHGCRMYVALFPCNECAKLIIQSGVKDVIYVSDKYHDDAIMVASRRLFDLAGVRYRQHVPKASHITIDF 269 KREDY+ W +YFM VAFLSA RSKDPS+QVGAC+V++ENKIVGIGYNG P GCSDD LPW R G LDTKY YVCHAE+NAI+N+N A + GC MYVALFPCNECAKLIIQ+G+K+VI++SDKYHD M A+RR+FDLAG+ YR+ PK + I IDF Sbjct: 9 KREDYLEWPEYFMAVAFLSAQRSKDPSSQVGACIVNSENKIVGIGYNGMPNGCSDDVLPWTRTG-ANRLDTKYPYVCHAELNAIMNKNSADVKGCSMYVALFPCNECAKLIIQAGIKEVIFMSDKYHDTTEMTAARRMFDLAGIIYREFKPKCNKIIIDF 167
BLAST of NO01G05070 vs. NCBI_GenBank
Match: XP_009872599.1 (PREDICTED: deoxycytidylate deaminase, partial [Apaloderma vittatum] >KFP78321.1 Deoxycytidylate deaminase, partial [Apaloderma vittatum]) HSP 1 Score: 248.8 bits (634), Expect = 1.900e-62 Identity = 113/160 (70.62%), Postives = 132/160 (82.50%), Query Frame = 0 Query: 109 KREDYISWDDYFMGVAFLSAMRSKDPSTQVGACLVDTENKIVGIGYNGFPRGCSDDSLPWARHGEGGFLDTKYAYVCHAEMNAILNRNIAPLHGCRMYVALFPCNECAKLIIQSGVKDVIYVSDKYHDDAIMVASRRLFDLAGVRYRQHVPKASHITIDF 269 KREDY+ W +YFM VAFLSA RSKDPS+QVGAC+V++ENKIVGIGYNG P GCSDD LPWAR LDTKY YVCHAE+NAI+N+N A + GC MYVALFPCNECAKLIIQ+G+K+VI++SDKYHD M A+RR+FDLAG+ YR+ PK S I IDF Sbjct: 9 KREDYLEWPEYFMAVAFLSAQRSKDPSSQVGACIVNSENKIVGIGYNGMPNGCSDDVLPWARTA-AHKLDTKYPYVCHAELNAIMNKNSADVKGCSMYVALFPCNECAKLIIQAGIKEVIFMSDKYHDTTEMTAARRMFDLAGIIYREFKPKCSKIVIDF 167 The following BLAST results are available for this feature:
BLAST of NO01G05070 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G05070 ID=NO01G05070|Name=NO01G05070|organism=Nannochloropsis oceanica|type=gene|length=2004bpback to top protein sequence of NO01G05070.1 >NO01G05070.1-protein ID=NO01G05070.1-protein|Name=NO01G05070.1|organism=Nannochloropsis oceanica|type=polypeptide|length=273bpback to top protein sequence of NO01G05070.2 >NO01G05070.2-protein ID=NO01G05070.2-protein|Name=NO01G05070.2|organism=Nannochloropsis oceanica|type=polypeptide|length=211bpback to top protein sequence of NO01G05070.3 >NO01G05070.3-protein ID=NO01G05070.3-protein|Name=NO01G05070.3|organism=Nannochloropsis oceanica|type=polypeptide|length=224bpback to top Synonyms
Publications
|