NO01G05070, NO01G05070 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G05070 vs. NCBI_GenBank
Match: EWM29464.1 (deoxycytidylate deaminase [Nannochloropsis gaditana]) HSP 1 Score: 327.0 bits (837), Expect = 5.500e-86 Identity = 186/271 (68.63%), Postives = 195/271 (71.96%), Query Frame = 0 Query: 1 MDGPSSNPSQGHHHNAPSALGIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIATPSKKGICETTLQVKMASLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKREDYISWDDYFMGVAFLSAMRSKDPSTQVGACLVDTENKIVGIGYNGFPRGCSDDSLPWARHGEGGFLDTKYAYVCHAEMNAILNRNIAPLHGCRMYVALFPCNECAKLIIQSGVKDVIYVSDKYHDDAIMVASRRLFDLAGVRYRQHVPKASHITIDFSKA 272 M S NPS+G HH+APSA GIA XXXXXXXXXXXXXXXX P ++ T QV KREDYISWDDYFMGVAFLSAMRSKDPSTQVGACLVDTENKIVGIGYNGFPRGCSDD+LPWAR +GGFLDTKYAYVCHAEMNAILNRNIAPLH CRMYVALFPCNECAKLIIQSGVKDVIY+SDKYHDDAIMVASRRLFDLAGVRYR+H PK + ITIDFS A Sbjct: 1 MGEASGNPSKGRHHDAPSATGIASPSGKTLPSTSAXXXXXXXXXXXXXXXXKEEPMG---PDRRTTVTTPGQVSKTG----------------TAQDSQGGSPVGSVTKREDYISWDDYFMGVAFLSAMRSKDPSTQVGACLVDTENKIVGIGYNGFPRGCSDDALPWARQSDGGFLDTKYAYVCHAEMNAILNRNIAPLHDCRMYVALFPCNECAKLIIQSGVKDVIYLSDKYHDDAIMVASRRLFDLAGVRYRKHTPKVNRITIDFSSA 252
BLAST of NO01G05070 vs. NCBI_GenBank
Match: GAY00495.1 (Hypothetical protein PINS_008366 [Pythium insidiosum]) HSP 1 Score: 256.1 bits (653), Expect = 1.200e-64 Identity = 118/163 (72.39%), Postives = 135/163 (82.82%), Query Frame = 0 Query: 109 KREDYISWDDYFMGVAFLSAMRSKDPSTQVGACLVDTENKIVGIGYNGFPRGCSDDSLPWARHGEGGFLDTKYAYVCHAEMNAILNRNIAPLHGCRMYVALFPCNECAKLIIQSGVKDVIYVSDKYHDDAIMVASRRLFDLAGVRYRQHVPKASHITIDFSKA 272 KREDYISWDDYFM VAFLSAMRSKDP TQVGAC+V+ E KIVGIGYNGFP GCSDD LPWAR E L+TKY +VCHAEMNAILN+N + L GC +YVALFPCNECAKLIIQSG++ ++Y SDKYHDD VASR+L D+AGV+YR+H + +TIDFS A Sbjct: 208 KREDYISWDDYFMSVAFLSAMRSKDPGTQVGACIVNKEKKIVGIGYNGFPNGCSDDVLPWARSHENP-LETKYPFVCHAEMNAILNKNSSDLKGCTIYVALFPCNECAKLIIQSGIESIVYYSDKYHDDWKFVASRKLLDMAGVKYRRHRLTKTSLTIDFSSA 369
BLAST of NO01G05070 vs. NCBI_GenBank
Match: XP_004343364.2 (deoxycytidylate deaminase [Capsaspora owczarzaki ATCC 30864]) HSP 1 Score: 255.8 bits (652), Expect = 1.600e-64 Identity = 114/160 (71.25%), Postives = 133/160 (83.12%), Query Frame = 0 Query: 109 KREDYISWDDYFMGVAFLSAMRSKDPSTQVGACLVDTENKIVGIGYNGFPRGCSDDSLPWARHGEGGFLDTKYAYVCHAEMNAILNRNIAPLHGCRMYVALFPCNECAKLIIQSGVKDVIYVSDKYHDDAIMVASRRLFDLAGVRYRQHVPKASHITIDF 269 KR+DY+ W DYFM VAFLSA RSKDPS+QVGAC+V+ ENKIVGIGYNG P GC+DD LPWAR E LDTKY YVCHAE+NA+LN+N + + GC +YVALFPCNECAK+IIQSG+K+VIY SDKYHD V SRRLFD+AG++YRQH+PK ITIDF Sbjct: 75 KRQDYLPWADYFMAVAFLSAQRSKDPSSQVGACIVNQENKIVGIGYNGMPNGCNDDLLPWARTAESP-LDTKYMYVCHAELNAVLNKNASDVKGCTIYVALFPCNECAKIIIQSGIKEVIYKSDKYHDRPEFVVSRRLFDMAGIKYRQHIPKMKQITIDF 233
BLAST of NO01G05070 vs. NCBI_GenBank
Match: KJE97002.1 (deoxycytidylate deaminase [Capsaspora owczarzaki ATCC 30864]) HSP 1 Score: 255.8 bits (652), Expect = 1.600e-64 Identity = 114/160 (71.25%), Postives = 133/160 (83.12%), Query Frame = 0 Query: 109 KREDYISWDDYFMGVAFLSAMRSKDPSTQVGACLVDTENKIVGIGYNGFPRGCSDDSLPWARHGEGGFLDTKYAYVCHAEMNAILNRNIAPLHGCRMYVALFPCNECAKLIIQSGVKDVIYVSDKYHDDAIMVASRRLFDLAGVRYRQHVPKASHITIDF 269 KR+DY+ W DYFM VAFLSA RSKDPS+QVGAC+V+ ENKIVGIGYNG P GC+DD LPWAR E LDTKY YVCHAE+NA+LN+N + + GC +YVALFPCNECAK+IIQSG+K+VIY SDKYHD V SRRLFD+AG++YRQH+PK ITIDF Sbjct: 30 KRQDYLPWADYFMAVAFLSAQRSKDPSSQVGACIVNQENKIVGIGYNGMPNGCNDDLLPWARTAESP-LDTKYMYVCHAELNAVLNKNASDVKGCTIYVALFPCNECAKIIIQSGIKEVIYKSDKYHDRPEFVVSRRLFDMAGIKYRQHIPKMKQITIDF 188
BLAST of NO01G05070 vs. NCBI_GenBank
Match: CBN75987.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 254.2 bits (648), Expect = 4.500e-64 Identity = 116/160 (72.50%), Postives = 134/160 (83.75%), Query Frame = 0 Query: 110 REDYISWDDYFMGVAFLSAMRSKDPSTQVGACLVDTENKIVGIGYNGFPRGCSDDSLPWARHGEGGFLDTKYAYVCHAEMNAILNRNIAPLHGCRMYVALFPCNECAKLIIQSGVKDVIYVSDKYHDDAIMVASRRLFDLAGVRYRQHVPKASHITIDFS 270 R DY+ WDDYFM VAFLSAMRSKDPSTQVGAC+V+ + +IVGIGYNGFP GCSDD LPWAR + LDTKY YVCHAEMNAILN+N A + GC +YVALFPCNECAKLIIQSG+++V+Y+SDKY + M ASRRLFDL+GV+ RQH+PK ITIDFS Sbjct: 122 RTDYLVWDDYFMSVAFLSAMRSKDPSTQVGACIVNEDKRIVGIGYNGFPMGCSDDDLPWARQADDE-LDTKYPYVCHAEMNAILNKNSADVKGCLIYVALFPCNECAKLIIQSGIREVVYLSDKYRETNSMKASRRLFDLSGVKCRQHIPKQDKITIDFS 280
BLAST of NO01G05070 vs. NCBI_GenBank
Match: XP_013785045.1 (deoxycytidylate deaminase-like isoform X1 [Limulus polyphemus]) HSP 1 Score: 253.4 bits (646), Expect = 7.700e-64 Identity = 113/160 (70.62%), Postives = 133/160 (83.12%), Query Frame = 0 Query: 109 KREDYISWDDYFMGVAFLSAMRSKDPSTQVGACLVDTENKIVGIGYNGFPRGCSDDSLPWARHGEGGFLDTKYAYVCHAEMNAILNRNIAPLHGCRMYVALFPCNECAKLIIQSGVKDVIYVSDKYHDDAIMVASRRLFDLAGVRYRQHVPKASHITIDF 269 KR DY+ W DYFM +AFLSAMRSKDP++QVGAC+V+ E KIVGIGYNG P GCSDD LPW R + LDTKY YVCHAEMNAILN+N A L C +YVALFPCNECAKLIIQSG+K+++Y+SDKYH+D MVASR+L D+AGV+YRQH+P+ S I IDF Sbjct: 16 KRVDYLQWSDYFMAIAFLSAMRSKDPNSQVGACVVNKEKKIVGIGYNGMPNGCSDDDLPWNREAD-NILDTKYPYVCHAEMNAILNKNSADLKDCTIYVALFPCNECAKLIIQSGIKEIVYLSDKYHNDYKMVASRQLLDMAGVKYRQHIPQHSQILIDF 174
BLAST of NO01G05070 vs. NCBI_GenBank
Match: XP_008611066.1 (hypothetical protein SDRG_07027 [Saprolegnia diclina VS20] >EQC35316.1 hypothetical protein SDRG_07027 [Saprolegnia diclina VS20]) HSP 1 Score: 252.7 bits (644), Expect = 1.300e-63 Identity = 117/161 (72.67%), Postives = 131/161 (81.37%), Query Frame = 0 Query: 109 KREDYISWDDYFMGVAFLSAMRSKDPSTQVGACLVDTENKIVGIGYNGFPRGCSDDSLPWARHGEGGFLDTKYAYVCHAEMNAILNRNIAPLHGCRMYVALFPCNECAKLIIQSGVKDVIYVSDKYHDDAIMVASRRLFDLAGVRYRQHVPKASHITIDFS 270 KR DY+SWDDYFM VAFLSAMRSKDPSTQVGAC+V++E KIVGIGYNGFP GC DD LPWAR LDTKY YVCHAEMNAILN+N + +HGC +YVALFPCNECAKLIIQSG+K+VIY SDKY DD ASRRL D+A V YRQH + +TIDF+ Sbjct: 171 KRTDYLSWDDYFMSVAFLSAMRSKDPSTQVGACIVNSEKKIVGIGYNGFPNGCDDDELPWARSAASP-LDTKYPYVCHAEMNAILNKNSSSVHGCTIYVALFPCNECAKLIIQSGIKNVIYYSDKYKDDWKFEASRRLLDMAKVTYRQHEMSTTSLTIDFT 330
BLAST of NO01G05070 vs. NCBI_GenBank
Match: OQR82125.1 (deoxycytidylate deaminase [Achlya hypogyna]) HSP 1 Score: 251.9 bits (642), Expect = 2.200e-63 Identity = 117/161 (72.67%), Postives = 130/161 (80.75%), Query Frame = 0 Query: 109 KREDYISWDDYFMGVAFLSAMRSKDPSTQVGACLVDTENKIVGIGYNGFPRGCSDDSLPWARHGEGGFLDTKYAYVCHAEMNAILNRNIAPLHGCRMYVALFPCNECAKLIIQSGVKDVIYVSDKYHDDAIMVASRRLFDLAGVRYRQHVPKASHITIDFS 270 KR DY+SWDDYFM VAFLSAMRSKDPSTQVGAC+V+ E KIVGIGYNGFP GC DD+LPWAR G L+TKY YVCHAEMNAILN+N + +H C +YVALFPCNECAKLIIQSG+K VIY SDKY DD ASRRL DLA V YRQH + +TIDF+ Sbjct: 164 KRTDYLSWDDYFMSVAFLSAMRSKDPSTQVGACIVNAEKKIVGIGYNGFPNGCDDDALPWARQGASP-LETKYPYVCHAEMNAILNKNSSSVHNCTIYVALFPCNECAKLIIQSGIKSVIYYSDKYKDDWKFEASRRLLDLAKVTYRQHEMSTTSLTIDFT 323
BLAST of NO01G05070 vs. NCBI_GenBank
Match: XP_022521586.1 (deoxycytidylate deaminase [Astyanax mexicanus]) HSP 1 Score: 251.5 bits (641), Expect = 2.900e-63 Identity = 114/161 (70.81%), Postives = 132/161 (81.99%), Query Frame = 0 Query: 109 KREDYISWDDYFMGVAFLSAMRSKDPSTQVGACLVDTENKIVGIGYNGFPRGCSDDSLPWARHGEGGFLDTKYAYVCHAEMNAILNRNIAPLHGCRMYVALFPCNECAKLIIQSGVKDVIYVSDKYHDDAIMVASRRLFDLAGVRYRQHVPKASHITIDFS 270 KR+DY+ W +YFM VAFLSA RSKDPS+QVGAC+V+ ENKIVGIGYNG P GC DD +PW+R E LDTKY YVCHAE+NAI+N+N A + GC MYVALFPCNECAKLIIQ+G+KDVIY+SDKYHD M ASRRL +LAGV+YRQ PK S I +DFS Sbjct: 21 KRQDYLEWPEYFMAVAFLSAQRSKDPSSQVGACIVNQENKIVGIGYNGMPNGCDDDLMPWSRSAEDK-LDTKYPYVCHAELNAIMNKNSADVKGCSMYVALFPCNECAKLIIQAGIKDVIYLSDKYHDSPEMTASRRLLNLAGVQYRQFKPKRSRIVLDFS 180
BLAST of NO01G05070 vs. NCBI_GenBank
Match: XP_001629273.1 (predicted protein [Nematostella vectensis] >EDO37210.1 predicted protein [Nematostella vectensis]) HSP 1 Score: 251.5 bits (641), Expect = 2.900e-63 Identity = 115/161 (71.43%), Postives = 131/161 (81.37%), Query Frame = 0 Query: 109 KREDYISWDDYFMGVAFLSAMRSKDPSTQVGACLVDTENKIVGIGYNGFPRGCSDDSLPWARHGEGGFLDTKYAYVCHAEMNAILNRNIAPLHGCRMYVALFPCNECAKLIIQSGVKDVIYVSDKYHDDAIMVASRRLFDLAGVRYRQHVPKASHITIDFS 270 KR DYISWDDYFM VAFLSA RSKDPS+QVGAC+V+ E KIVGIGYNG P GCSDD LPW RH + LDTKY YVCHAEMNAILN+N A + GC +YVALFPCNEC+K+IIQ+G+K+V++VSDKYHD M ASRRL DLAGV+YRQ P I IDF+ Sbjct: 42 KRTDYISWDDYFMSVAFLSAQRSKDPSSQVGACIVNKERKIVGIGYNGMPNGCSDDELPWNRHADDE-LDTKYPYVCHAEMNAILNKNSADVKGCTVYVALFPCNECSKIIIQAGLKEVVFVSDKYHDKPSMKASRRLLDLAGVKYRQFKPSMEKIVIDFN 201 The following BLAST results are available for this feature:
BLAST of NO01G05070 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G05070 ID=NO01G05070|Name=NO01G05070|organism=Nannochloropsis oceanica|type=gene|length=2004bpback to top protein sequence of NO01G05070.1 >NO01G05070.1-protein ID=NO01G05070.1-protein|Name=NO01G05070.1|organism=Nannochloropsis oceanica|type=polypeptide|length=273bpback to top protein sequence of NO01G05070.2 >NO01G05070.2-protein ID=NO01G05070.2-protein|Name=NO01G05070.2|organism=Nannochloropsis oceanica|type=polypeptide|length=211bpback to top protein sequence of NO01G05070.3 >NO01G05070.3-protein ID=NO01G05070.3-protein|Name=NO01G05070.3|organism=Nannochloropsis oceanica|type=polypeptide|length=224bpback to top Synonyms
Publications
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