NO01G05060, NO01G05060 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G05060 vs. NCBI_GenBank
Match: XP_020112209.1 (uncharacterized protein LOC109726820 [Ananas comosus]) HSP 1 Score: 146.0 bits (367), Expect = 1.700e-31 Identity = 74/159 (46.54%), Postives = 101/159 (63.52%), Query Frame = 0 Query: 94 RLIDSHHHVWT---DGEEPFPYANGQSAPPGLQDSGTAEKFLTLAAAAGVERSLIVQPILYLYDHSYVRSVLQAHPGKFEGMLNANPTLSPEAAAAAIVRLHGEGFKSIRFNPYIWPAGEKMDNDVGRAMFAEAGRLGMPVGLMLFKGLHLHLPEVNAL 250 ++IDSH HVW + E +PY G P L+ G + L A AGV+ +LIVQPI + +DHSYV SVL+ HP KF G L ANP + +G++++RFNPY+WP+G+KM N++G+AMFA+AG LG PVG M KGL+LH+ E+ L Sbjct: 61 KVIDSHLHVWATPQEAVEKYPYFPGNE--PSLR--GDVDFLLEQMAEAGVDGALIVQPINHKFDHSYVTSVLKKHPSKFVGCLLANPAEDGSGVKQLEDLIVKDGYRAVRFNPYLWPSGQKMTNEIGKAMFAKAGELGAPVGFMCTKGLNLHIEEIEEL 215
BLAST of NO01G05060 vs. NCBI_GenBank
Match: XP_021845924.1 (uncharacterized protein LOC110785732 [Spinacia oleracea]) HSP 1 Score: 146.0 bits (367), Expect = 1.700e-31 Identity = 84/204 (41.18%), Postives = 117/204 (57.35%), Query Frame = 0 Query: 49 TSLSSSKFSHRLRRVQYVKMASSXXXXFSTPAPSSRSSDEGTFPYRLIDSHHHVWT---DGEEPFPYANGQSAPPGLQDSGTAEKFLTLAAAAGVERSLIVQPILYLYDHSYVRSVLQAHPGKFEGMLNANPTLSPEAAAAAIVRLHGEGFKSIRFNPYIWPAGEKMDNDVGRAMFAEAGRLGMPVGLMLFKGLHLHLPEVNAL 250 TSL+ SK H L + + + P SS SS P ++IDSH HVW + E +PY GQ P L +G A+ AGV+ +LIVQPI + +DHSYV S+L+ +P KF G ANP + +G+ ++RFNPY+WP+G+KM N+VG+A+F++AG LG+PVG M KGL+LHL E+ L Sbjct: 24 TSLNFSKLPHSLPKSPHFQKL--------LPKMSSASSANIPSPAKVIDSHLHVWASPQEAAEKYPYFPGQE--PTL--AGHADFLFECMEEAGVDGALIVQPINHKFDHSYVTSILKKYPSKFSGCCLANPADDRSGIEQLEDLVTKDGYCAVRFNPYLWPSGQKMTNEVGKALFSKAGELGIPVGFMCMKGLNLHLSEIEEL 215
BLAST of NO01G05060 vs. NCBI_GenBank
Match: XP_011020814.1 (PREDICTED: uncharacterized protein LOC105123050 [Populus euphratica]) HSP 1 Score: 144.1 bits (362), Expect = 6.300e-31 Identity = 75/171 (43.86%), Postives = 105/171 (61.40%), Query Frame = 0 Query: 82 SSRSSDEGTFPYRLIDSHHHVWTDGEE---PFPYANGQSAPPGLQDSGTAEKFLTLAAAAGVERSLIVQPILYLYDHSYVRSVLQAHPGKFEGMLNANPTLSPEAAAAAIVRLHGEGFKSIRFNPYIWPAGEKMDNDVGRAMFAEAGRLGMPVGLMLFKGLHLHLPEVNAL 250 +S +D P ++IDSH HVW EE +PY GQ P L+ G + L AGV+ +LIVQPI + +DHS V SVL+ +P KF G ANP + +G++++RFNPY+WP+GEKM ND+G+A+F++AG LG+PVG M KGL+LH+ E+ L Sbjct: 53 TSSGADNKKNPAKVIDSHLHVWASPEEAAGKYPYFPGQE--PNLR--GDLDFLLQSLEEAGVDGALIVQPINHKFDHSLVTSVLKKYPNKFVGCCLANPAEDGSGLKHLEELILKDGYRAVRFNPYLWPSGEKMTNDIGKALFSKAGELGVPVGFMCMKGLNLHISEIQEL 219
BLAST of NO01G05060 vs. NCBI_GenBank
Match: XP_021976219.1 (uncharacterized protein LOC110871795 [Helianthus annuus] >OTG17256.1 putative hydrolase [Helianthus annuus]) HSP 1 Score: 144.1 bits (362), Expect = 6.300e-31 Identity = 72/161 (44.72%), Postives = 101/161 (62.73%), Query Frame = 0 Query: 94 RLIDSHHHVWTDGE---EPFPYANGQSAPPGLQDSGTAEKFLTLAAAAGVERSLIVQPILYLYDHSYVRSVLQAHPGKFEGMLNANPTLSPEAAAAAIVRLHGEGFKSIRFNPYIWPAGEKMDNDVGRAMFAEAGRLGMPVGLMLFKGLHLHLPEVNALLS 252 ++IDSH HVW + E FPY GQ P ++ G + + AGV+ +LIVQPI + +DHSYV SVL+ HP KF G ANP + +G+++IRFNPY+WP+G++M N +G+AMF++AG LG+PVG M KGL+LH+ E+ L S Sbjct: 53 KIIDSHLHVWASPQEAIEKFPYVPGQE--PSIR--GNFDFLIKCMEEAGVDGALIVQPINHKFDHSYVTSVLKKHPSKFVGCCLANPAEDGSGVQQLERLILEDGYRAIRFNPYLWPSGQQMTNKIGKAMFSKAGELGVPVGFMCMKGLNLHISEIKELCS 209
BLAST of NO01G05060 vs. NCBI_GenBank
Match: EJK44150.1 (hypothetical protein THAOC_37337, partial [Thalassiosira oceanica]) HSP 1 Score: 142.9 bits (359), Expect = 1.400e-30 Identity = 74/162 (45.68%), Postives = 97/162 (59.88%), Query Frame = 0 Query: 96 IDSHHHVWTDGEE---PFPYANGQSAPP-GLQDSGTAEKFLTLAAAAGVERSLIVQPILYLYDHSYVRSVLQAHPGKFEGMLNANPTLSPEAAAAAIVRLHGEGFKSIRFNPYIWPAGEKMDNDVGR--AMFAEAGRLGMPVGLMLFKGLHLHLPEVNALLS 252 IDSH HVW +E FPYA PP +QD T K L A V+ LIVQPI + +DHSYV ++ +P KF+GML +P+LSP+ A + L GF +RFNPY+WP G+ M D G A++ G L +PVG+M FKGL LHL ++ AL+S Sbjct: 42 IDSHLHVWASSDEASSSFPYAGDDQVPPQSIQDEATPAKLLERMEEAKVDGCLIVQPINHKFDHSYVSDAMRRYPDKFKGMLLHDPSLSPDMAVTRLEELVLAGFCGVRFNPYLWPEGKTMSEDGGNGLAVYKRCGELKVPVGVMCFKGLGLHLDDIEALIS 203
BLAST of NO01G05060 vs. NCBI_GenBank
Match: KNA25617.1 (hypothetical protein SOVF_004850 [Spinacia oleracea]) HSP 1 Score: 142.9 bits (359), Expect = 1.400e-30 Identity = 76/171 (44.44%), Postives = 105/171 (61.40%), Query Frame = 0 Query: 82 SSRSSDEGTFPYRLIDSHHHVWT---DGEEPFPYANGQSAPPGLQDSGTAEKFLTLAAAAGVERSLIVQPILYLYDHSYVRSVLQAHPGKFEGMLNANPTLSPEAAAAAIVRLHGEGFKSIRFNPYIWPAGEKMDNDVGRAMFAEAGRLGMPVGLMLFKGLHLHLPEVNAL 250 SS SS P ++IDSH HVW + E +PY GQ P L +G A+ AGV+ +LIVQPI + +DHSYV S+L+ +P KF G ANP + +G+ ++RFNPY+WP+G+KM N+VG+A+F++AG LG+PVG M KGL+LHL E+ L Sbjct: 2 SSASSANIPSPAKVIDSHLHVWASPQEAAEKYPYFPGQE--PTL--AGHADFLFECMEEAGVDGALIVQPINHKFDHSYVTSILKKYPSKFSGCCLANPADDRSGIEQLEDLVTKDGYCAVRFNPYLWPSGQKMTNEVGKALFSKAGELGIPVGFMCMKGLNLHLSEIEEL 168
BLAST of NO01G05060 vs. NCBI_GenBank
Match: ABK95586.1 (unknown [Populus trichocarpa]) HSP 1 Score: 142.5 bits (358), Expect = 1.800e-30 Identity = 75/171 (43.86%), Postives = 105/171 (61.40%), Query Frame = 0 Query: 82 SSRSSDEGTFPYRLIDSHHHVWTDGEE---PFPYANGQSAPPGLQDSGTAEKFLTLAAAAGVERSLIVQPILYLYDHSYVRSVLQAHPGKFEGMLNANPTLSPEAAAAAIVRLHGEGFKSIRFNPYIWPAGEKMDNDVGRAMFAEAGRLGMPVGLMLFKGLHLHLPEVNAL 250 +S +D T P ++IDSH HVW EE +PY GQ P L+ G + L AGV+ +LIVQPI + +DHS V SVL+ +P KF G ANP + +G++++RFNPY+W +GEKM ND+G+A+F++AG LG+PVG M KGL+LH+ E+ L Sbjct: 3 TSSGADNKTNPAKVIDSHLHVWASPEEAAGKYPYFPGQE--PTLR--GDLDFLLQSLEEAGVDGALIVQPINHKFDHSLVTSVLKKYPNKFVGCCLANPAEDGSGLKHLEELILKDGYRAVRFNPYLWSSGEKMTNDIGKALFSKAGELGVPVGFMCMKGLNLHISEIQEL 169
BLAST of NO01G05060 vs. NCBI_GenBank
Match: XP_002304666.2 (uncharacterized protein LOC7481203 isoform X1 [Populus trichocarpa] >PNT46016.1 hypothetical protein POPTR_003G167600v3 [Populus trichocarpa]) HSP 1 Score: 142.5 bits (358), Expect = 1.800e-30 Identity = 75/171 (43.86%), Postives = 105/171 (61.40%), Query Frame = 0 Query: 82 SSRSSDEGTFPYRLIDSHHHVWTDGEE---PFPYANGQSAPPGLQDSGTAEKFLTLAAAAGVERSLIVQPILYLYDHSYVRSVLQAHPGKFEGMLNANPTLSPEAAAAAIVRLHGEGFKSIRFNPYIWPAGEKMDNDVGRAMFAEAGRLGMPVGLMLFKGLHLHLPEVNAL 250 +S +D T P ++IDSH HVW EE +PY GQ P L+ G + L AGV+ +LIVQPI + +DHS V SVL+ +P KF G ANP + +G++++RFNPY+W +GEKM ND+G+A+F++AG LG+PVG M KGL+LH+ E+ L Sbjct: 53 TSSGADNKTNPAKVIDSHLHVWASPEEAAGKYPYFPGQE--PTLR--GDLDFLLQSLEEAGVDGALIVQPINHKFDHSLVTSVLKKYPNKFVGCCLANPAEDGSGLKHLEELILKDGYRAVRFNPYLWSSGEKMTNDIGKALFSKAGELGVPVGFMCMKGLNLHISEIQEL 219
BLAST of NO01G05060 vs. NCBI_GenBank
Match: XP_002291082.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED91189.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 141.7 bits (356), Expect = 3.100e-30 Identity = 76/176 (43.18%), Postives = 103/176 (58.52%), Query Frame = 0 Query: 82 SSRSSDEGTFPYRLIDSHHHVWTDGEEP---FPYANGQSAPPG-LQDSGTAEKFLTLAAAAGVERSLIVQPILYLYDHSYVRSVLQAHPGKFEGMLNANPTLSPEAAAAAIVRLHGEGFKSIRFNPYIWPAGEKMDNDV--GRAMFAEAGRLGMPVGLMLFKGLHLHLPEVNALLS 252 S RS+ ++IDSH H+W EE +PYA + PP LQ+ + L AGV+ SLIVQPI + YDHSYV ++A+P KF+GML +P LSP+ A + L GF +RFNPY+WP GE M G A++ G L +PVG+M FKGL LH+ ++ L+S Sbjct: 33 SIRSTATCMLATKVIDSHLHIWATAEEASSHYPYAGPEQTPPSQLQNVASPTALLEQMNKAGVDGSLIVQPINHKYDHSYVSDAIKAYPDKFKGMLLHDPYLSPQLAVERLEELVLSGFVGVRFNPYLWPEGELMSTPAGCGLAVYKRCGELNVPVGVMCFKGLELHIDDIVHLIS 208
BLAST of NO01G05060 vs. NCBI_GenBank
Match: XP_009628830.1 (PREDICTED: uncharacterized protein LOC104119117 [Nicotiana tomentosiformis]) HSP 1 Score: 141.7 bits (356), Expect = 3.100e-30 Identity = 73/159 (45.91%), Postives = 98/159 (61.64%), Query Frame = 0 Query: 94 RLIDSHHHVWT---DGEEPFPYANGQSAPPGLQDSGTAEKFLTLAAAAGVERSLIVQPILYLYDHSYVRSVLQAHPGKFEGMLNANPTLSPEAAAAAIVRLHGEGFKSIRFNPYIWPAGEKMDNDVGRAMFAEAGRLGMPVGLMLFKGLHLHLPEVNAL 250 ++IDSH HVW + E +PY GQ P L G + L AGV+ +LIVQPI + +DHSYV SVL+ P KF G ANP + +G++++RFNPY+WP GEKM N++G+A+F++AG LG+PVG M KGL LHLPE+ L Sbjct: 63 KVIDSHLHVWASPQEAAENYPYFPGQ--VPSL--PGHVDYLLECMEEAGVDGALIVQPINHKFDHSYVTSVLKKFPSKFVGCCLANPAEDGSGIKQLEDLVLKDGYRAVRFNPYLWPTGEKMTNEIGKALFSKAGELGVPVGFMCMKGLDLHLPEIEEL 217 The following BLAST results are available for this feature:
BLAST of NO01G05060 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G05060 ID=NO01G05060|Name=NO01G05060|organism=Nannochloropsis oceanica|type=gene|length=2470bpback to top protein sequence of NO01G05060.2 >NO01G05060.2-protein ID=NO01G05060.2-protein|Name=NO01G05060.2|organism=Nannochloropsis oceanica|type=polypeptide|length=262bpback to top protein sequence of NO01G05060.1 >NO01G05060.1-protein ID=NO01G05060.1-protein|Name=NO01G05060.1|organism=Nannochloropsis oceanica|type=polypeptide|length=262bpback to top Synonyms
Publications
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