NO01G05060, NO01G05060 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G05060 vs. NCBI_GenBank
Match: EWM29438.1 (hypothetical protein Naga_100083g1, partial [Nannochloropsis gaditana]) HSP 1 Score: 223.4 bits (568), Expect = 8.200e-55 Identity = 125/227 (55.07%), Postives = 157/227 (69.16%), Query Frame = 0 Query: 10 KRL-RPFPNVASY--PTQGIALCLFMLVLSHLSTTAKAFQLRTSLSSS-KFSHRLRRVQY-VKMASSXXXXFSTPAPSSRSSDEGTFPYRLIDSHHHVWTDGEEPFPYANGQSAPPGLQDSGTAEKFLTLAAAAGVERSLIVQPILYLYDHSYVRSVLQAHPGKFEGMLNANPTLSPEAAAAAIVRLHGEGFKSIRFNPYIWPAGEKMDNDVGRAMFAEAGRLGMPV 232 KRL R FP V + P + L + +L L +T +A R SS+ S R++ ++ ++MA ST + S S+ +G FPYRLIDSHHHVWT G P+ YA GQSAPPGLQ+ G+ E+FL LAA AGV+RSLIVQPILY++DHSYVR+ L+ +P KF GML ANPTLSP+ A A + RL +GF S+RFNPYIWPAGEKMDN GRA++AEAGR MPV Sbjct: 3 KRLGRHFPIVCTLQPPRNTLLLFMILLTLGRTNTFVEALVSRVHSSSAFSLSQRIQPPRHLLRMA-------STSSVDSVSNKDG-FPYRLIDSHHHVWTAGLLPYAYAEGQSAPPGLQEKGSVEEFLGLAANAGVQRSLIVQPILYMFDHSYVRAALERYPEKFHGMLVANPTLSPQEATAELGRLQSQGFNSVRFNPYIWPAGEKMDNPTGRALYAEAGRRTMPV 221
BLAST of NO01G05060 vs. NCBI_GenBank
Match: GAQ86399.1 (Amidohydrolase family protein [Klebsormidium nitens]) HSP 1 Score: 152.5 bits (384), Expect = 1.800e-33 Identity = 75/156 (48.08%), Postives = 98/156 (62.82%), Query Frame = 0 Query: 94 RLIDSHHHVWTDGEEPFPYANGQSAPPGLQDSGTAEKFLTLAAAAGVERSLIVQPILYLYDHSYVRSVLQAHPGKFEGMLNANPTLSPEAAAAAIVRLHGEGFKSIRFNPYIWPAGEKMDNDVGRAMFAEAGRLGMPVGLMLFKGLHLHLPEVNAL 250 R++DSH HVW EE + S P + G + L AGV+ +LIVQP + +DHSYV S L+ HP KF G L A+PT + +GF ++RFNPY+WPAGE+M ND+GRAMFA+AG+LG PVG M FKGLHLH+ ++ AL Sbjct: 18 RVLDSHLHVWASEEESKTFPYNLSQKPTI--PGNTDLLLQEMDVAGVDGALIVQPFDHKFDHSYVSSALKKHPNKFAGCLLADPTPGGGGTRELERLVQEDGFSAVRFNPYLWPAGEQMTNDIGRAMFAKAGQLGAPVGFMCFKGLHLHIDDIEAL 171
BLAST of NO01G05060 vs. NCBI_GenBank
Match: XP_024399436.1 (uncharacterized protein LOC112293786 isoform X1 [Physcomitrella patens] >PNR62469.1 hypothetical protein PHYPA_000893 [Physcomitrella patens]) HSP 1 Score: 151.8 bits (382), Expect = 3.000e-33 Identity = 93/217 (42.86%), Postives = 123/217 (56.68%), Query Frame = 0 Query: 40 TTAKAFQLRTSLSSS-----KFSHRLRRVQYVKMASSXXXXFSTPAPSSRSSDEGTFPYRLIDSHHHVWTDGEE--PFPYANGQSAPPGLQDSGTAEKFLTLAAAAGVERSLIVQPILYLYDHSYVRSVLQAHPGKFEGMLNANPTLSPEAAAAAIVRLHGEGFKSIRFNPYIWPAGEKMDNDVGRAMFAEAGRLGMPVGLMLFKGLHLHLPEVNAL 250 TT + R L+ S F R R++Q +K+ S + +E T IDSH HVW +E FPY GQ P L G+A+ L A AGV+ ++I+QPI + +DHSYV SVLQ +P KF GM A+PT A + E FK +RFNPY+WP+GEKM N++G+AMFA+AG LG+PVG M FKGL LH+ E+ L Sbjct: 110 TTRRVLPFRALLAISAGAAIAFLRRRRKLQPLKVRGSV---------AYTQGEEKTEKMTKIDSHLHVWASPDEAKKFPYFPGQE--PTL--PGSADFLLKNMAEAGVDGAVIIQPINHKFDHSYVSSVLQKYPDKFVGMCLADPTEGGGGAKEIERLIKEENFKGVRFNPYLWPSGEKMTNELGKAMFAKAGELGVPVGFMCFKGLMLHIDEIEEL 313
BLAST of NO01G05060 vs. NCBI_GenBank
Match: XP_024399518.1 (uncharacterized protein LOC112293786 isoform X2 [Physcomitrella patens]) HSP 1 Score: 151.4 bits (381), Expect = 4.000e-33 Identity = 80/156 (51.28%), Postives = 102/156 (65.38%), Query Frame = 0 Query: 96 IDSHHHVWTDGEE--PFPYANGQSAPPGLQDSGTAEKFLTLAAAAGVERSLIVQPILYLYDHSYVRSVLQAHPGKFEGMLNANPTLSPEAAAAAIVRLHGEGFKSIRFNPYIWPAGEKMDNDVGRAMFAEAGRLGMPVGLMLFKGLHLHLPEVNAL 250 IDSH HVW +E FPY GQ P L G+A+ L A AGV+ ++I+QPI + +DHSYV SVLQ +P KF GM A+PT A + E FK +RFNPY+WP+GEKM N++G+AMFA+AG LG+PVG M FKGL LH+ E+ L Sbjct: 4 IDSHLHVWASPDEAKKFPYFPGQE--PTL--PGSADFLLKNMAEAGVDGAVIIQPINHKFDHSYVSSVLQKYPDKFVGMCLADPTEGGGGAKEIERLIKEENFKGVRFNPYLWPSGEKMTNELGKAMFAKAGELGVPVGFMCFKGLMLHIDEIEEL 155
BLAST of NO01G05060 vs. NCBI_GenBank
Match: EFJ29869.1 (hypothetical protein SELMODRAFT_270742 [Selaginella moellendorffii]) HSP 1 Score: 150.2 bits (378), Expect = 8.800e-33 Identity = 77/161 (47.83%), Postives = 102/161 (63.35%), Query Frame = 0 Query: 94 RLIDSHHHVWTDGEE--PFPYANGQSAPPGLQDSGTAEKFLTLAAAAGVERSLIVQPILYLYDHSYVRSVLQAHPGKFEGMLNANPTLSPEAAAAAIVRLHGEGFKSIRFNPYIWPAGEKMDNDVGRAMFAEAGRLGMPVGLMLFKGLHLHLPEVNALLSL 253 R++DSH HVW +E FPY GQ P + G+ + L A V +LIVQPI + +DHSYV SVLQ+HP KF G NP A + +G++++RFNPY+WP+GEKM N+VG+ MFA+AG+LG+PVG M FKGL LH+ E+ L SL Sbjct: 7 RIVDSHLHVWASKKEAQDFPYFPGQE--PTI--DGSIQLLLDKLCEANVAGALIVQPINHKFDHSYVTSVLQSHPEKFVGCCLGNPEQDGRGLAELERLVEHDGYRAVRFNPYLWPSGEKMTNEVGKRMFAKAGQLGIPVGFMCFKGLSLHIEEIETLCSL 163
BLAST of NO01G05060 vs. NCBI_GenBank
Match: XP_002968753.2 (uncharacterized protein LOC9650966 [Selaginella moellendorffii]) HSP 1 Score: 150.2 bits (378), Expect = 8.800e-33 Identity = 77/161 (47.83%), Postives = 102/161 (63.35%), Query Frame = 0 Query: 94 RLIDSHHHVWTDGEE--PFPYANGQSAPPGLQDSGTAEKFLTLAAAAGVERSLIVQPILYLYDHSYVRSVLQAHPGKFEGMLNANPTLSPEAAAAAIVRLHGEGFKSIRFNPYIWPAGEKMDNDVGRAMFAEAGRLGMPVGLMLFKGLHLHLPEVNALLSL 253 R++DSH HVW +E FPY GQ P + G+ + L A V +LIVQPI + +DHSYV SVLQ+HP KF G NP A + +G++++RFNPY+WP+GEKM N+VG+ MFA+AG+LG+PVG M FKGL LH+ E+ L SL Sbjct: 37 RIVDSHLHVWASKKEAQDFPYFPGQE--PTI--DGSIQLLLDKLCEANVAGALIVQPINHKFDHSYVTSVLQSHPEKFVGCCLGNPEQDGRGLAELERLVEHDGYRAVRFNPYLWPSGEKMTNEVGKRMFAKAGQLGIPVGFMCFKGLSLHIEEIETLCSL 193
BLAST of NO01G05060 vs. NCBI_GenBank
Match: XP_005779216.1 (hypothetical protein EMIHUDRAFT_73513 [Emiliania huxleyi CCMP1516] >EOD26787.1 hypothetical protein EMIHUDRAFT_73513 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 149.1 bits (375), Expect = 2.000e-32 Identity = 84/183 (45.90%), Postives = 113/183 (61.75%), Query Frame = 0 Query: 69 ASSXXXXFSTPAPSSRSSDEGTFPYRLIDSHHHVWTDGEEPFPYANGQSAPPGLQDSGTAEKFLTLAAAAGVERSLIVQPILYLYDHSYVRSVLQAHPGKFEGMLNANPTLSPEAAAAAIVRLHGEGFKSIRFNPYIWPAGEKMDNDVGRAMFAEAGRLGMPVGLMLFKGLHLHLPEVNALLS 252 A+S + P P S ++ T R+IDS H+W+DGE PFP+A+ P L+ +G+ E FL A AGV +L+VQP +++DHSYV L+AHP F GM ANPTL PE A AA+ LH GF +RFN + G + +DVGRA++ AG LGMPVG+M FKGL +P++ L S Sbjct: 9 ATSFATLATFPTPGSTAASM-TGASRVIDSAIHLWSDGEAPFPWAS--PPPADLRSAGSPEAFLAAAREAGVGGALVVQPANHMHDHSYVSEALKAHPTFFRGMGLANPTLPPEEAIAALEALHTAGFVGVRFNAGAFEGG--LCSDVGRALYQRAGELGMPVGVMAFKGLAGFVPDLKRLCS 186
BLAST of NO01G05060 vs. NCBI_GenBank
Match: XP_005780758.1 (hypothetical protein EMIHUDRAFT_64168 [Emiliania huxleyi CCMP1516] >EOD28329.1 hypothetical protein EMIHUDRAFT_64168 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 149.1 bits (375), Expect = 2.000e-32 Identity = 86/184 (46.74%), Postives = 114/184 (61.96%), Query Frame = 0 Query: 69 ASSXXXXFSTPAPSSRSSDEGTFPYRLIDSHHHVWTDGEEPFPYANGQSAPPG-LQDSGTAEKFLTLAAAAGVERSLIVQPILYLYDHSYVRSVLQAHPGKFEGMLNANPTLSPEAAAAAIVRLHGEGFKSIRFNPYIWPAGEKMDNDVGRAMFAEAGRLGMPVGLMLFKGLHLHLPEVNALLS 252 A+S + P P S ++ T R+IDS H+W+DGE PFP+A S PP L+ +G+ E FL A AGV +L+VQP +++DHSYV L+AHP F GM ANPTL PE A AA+ LH GF +RFN + G + +DVGRA++ AG LGMPVG+M FKGL +P++ L S Sbjct: 9 ATSFATLATFPTPGSTAASM-TGASRVIDSAIHLWSDGEAPFPWA---SPPPAELRSAGSPEAFLAAAREAGVGGALVVQPANHMHDHSYVSEALKAHPTFFRGMGLANPTLPPEEAIAALEALHTAGFVGVRFNAGAFEGG--LCSDVGRALYQRAGELGMPVGVMAFKGLAGFVPDLKRLCS 186
BLAST of NO01G05060 vs. NCBI_GenBank
Match: XP_024520248.1 (uncharacterized protein LOC9662758 [Selaginella moellendorffii]) HSP 1 Score: 149.1 bits (375), Expect = 2.000e-32 Identity = 77/161 (47.83%), Postives = 101/161 (62.73%), Query Frame = 0 Query: 94 RLIDSHHHVWTDGEE--PFPYANGQSAPPGLQDSGTAEKFLTLAAAAGVERSLIVQPILYLYDHSYVRSVLQAHPGKFEGMLNANPTLSPEAAAAAIVRLHGEGFKSIRFNPYIWPAGEKMDNDVGRAMFAEAGRLGMPVGLMLFKGLHLHLPEVNALLSL 253 R++DSH HVW +E FPY GQ P + G+ + L A V +LIVQPI + +DHSYV SVLQ HP KF G NP A + +G++++RFNPY+WP+GEKM N+VG+ MFA+AG+LG+PVG M FKGL LH+ E+ L SL Sbjct: 37 RIVDSHLHVWASKKEAQEFPYFPGQE--PTI--DGSIQLLLDKLCEANVAGALIVQPINHKFDHSYVTSVLQNHPEKFVGCCLGNPEQDGRGLAELERLVEQDGYRAVRFNPYLWPSGEKMTNEVGKRMFAKAGQLGIPVGFMCFKGLSLHIEEIETLCSL 193
BLAST of NO01G05060 vs. NCBI_GenBank
Match: OAY68331.1 (4-sulfomuconolactone hydrolase [Ananas comosus]) HSP 1 Score: 147.9 bits (372), Expect = 4.400e-32 Identity = 75/173 (43.35%), Postives = 106/173 (61.27%), Query Frame = 0 Query: 80 APSSRSSDEGTFPYRLIDSHHHVWT---DGEEPFPYANGQSAPPGLQDSGTAEKFLTLAAAAGVERSLIVQPILYLYDHSYVRSVLQAHPGKFEGMLNANPTLSPEAAAAAIVRLHGEGFKSIRFNPYIWPAGEKMDNDVGRAMFAEAGRLGMPVGLMLFKGLHLHLPEVNAL 250 A ++ + +++IDSH HVW + E +PY G P L+ G + L A AGV+ +LIVQPI + +DHSYV SVL+ HP KF G L ANP + +G++++RFNPY+WP+G+KM N++G+AMFA+AG LG PVG M KGL+LH+ E+ L Sbjct: 2 ASKAKEGSSSSSSFKVIDSHLHVWATPQEAVEKYPYFPGNE--PSLR--GDVDFLLEQMAEAGVDGALIVQPINHKFDHSYVTSVLKKHPSKFVGCLLANPAEDGSGVKQLEDLIVKDGYRAVRFNPYLWPSGQKMTNEIGKAMFAKAGELGAPVGFMCTKGLNLHIEEIEEL 170 The following BLAST results are available for this feature:
BLAST of NO01G05060 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G05060 ID=NO01G05060|Name=NO01G05060|organism=Nannochloropsis oceanica|type=gene|length=2470bpback to top protein sequence of NO01G05060.2 >NO01G05060.2-protein ID=NO01G05060.2-protein|Name=NO01G05060.2|organism=Nannochloropsis oceanica|type=polypeptide|length=262bpback to top protein sequence of NO01G05060.1 >NO01G05060.1-protein ID=NO01G05060.1-protein|Name=NO01G05060.1|organism=Nannochloropsis oceanica|type=polypeptide|length=262bpback to top Synonyms
Publications
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