NO01G04920, NO01G04920 (gene) Nannochloropsis oceanica

Overview
NameNO01G04920
Unique NameNO01G04920
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2130
Alignment locationchr1:1301932..1304061 -

Link to JBrowse

Properties
Property NameValue
DescriptionProlyl-trna synthetase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:1301932..1304061 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006433prolyl-tRNA aminoacylation
GO:0006418tRNA aminoacylation for protein translation
GO:0006412translation
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004827proline-tRNA ligase activity
GO:0000166nucleotide binding
GO:0005524ATP binding
GO:0004812aminoacyl-tRNA ligase activity
GO:0003824catalytic activity
GO:0000166nucleotide binding
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
GO:0016020membrane
GO:0005737cytoplasm
Vocabulary: INTERPRO
TermDefinition
IPR009068S15_NS1_RNA-bd
IPR017449Pro-tRNA_synth_II
IPR006195aa-tRNA-synth_II
IPR004154Anticodon-bd
IPR002314aa-tRNA-synt_IIb_cons-dom
IPR016061Pro-tRNA_ligase_II_C
IPR000738WHEP-TRS
Homology
BLAST of NO01G04920 vs. NCBI_GenBank
Match: OSX69098.1 (hypothetical protein BU14_1865s0001 [Porphyra umbilicalis])

HSP 1 Score: 615.5 bits (1586), Expect = 2.000e-172
Identity = 303/506 (59.88%), Postives = 377/506 (74.51%), Query Frame = 0
Query:  196 PRDENYSQWYLDVIAAADLVDQSPVKGCMVIKPYGMALWDALREELDKRIKATGAQNAYFPLFIPRSFLSKEAEHVDGFAKECAVVTHHRLCADP--SGAPGLIP-DPTAKLEEPLVVRPTSETVIWNMFSKWIGSHRDLPLKINQWANVVRWEMRTRPFLRSAEFLWQEGHTAHATREEALVCAKEQLDLYASVCEDMLALPVIKGIKSETERFAGADETFTIEALMQNGWALQSGTSHFLGQNFARAFDVFFQTKEGGREMVWATSWGVSTRLIGALVMTHSDDKGLVLPPSVAPVQVVVVPIVKGAGSEEDDRTTAFVNTVVSAMRTQGIRVLVDDRPNMRPGAKFFDWERKGVPLRLEIGPRDAAAGAVTLARRMGGE--KETVPAGNNFGHVIQKELEGCQASLLSKAEERVSSRTFRVDTYEEMKARLREGGREEIGFFLAHWKDDKENEAKIKEDCRATIRCYPLDLNGEGSMGARVGERKCFYSGEPATHIALFARAF 697
            PR E++S WY  VI++ DL + SPVKGCMVIKP+G A+W+ LR++LD  IKA+GA+NAYFPL IP+SFLS+EA HVDGFAKECA+VTHHRL A P   GA   +  DP A LEEPL++RPTSET+IW+MF+KWI SHRDLPL INQWANVVRWEMRTRPFLR+ EFLWQEGHTAHA+ EEA   A++ +D+YA   E MLA+PV  G KS  ERFAGA++T TIEA+M NGWALQ+GTSH+LG  FA AFDV +Q + G R+ V+A+SWGVSTRL+GAL+MTHSDD GL LPP+VAPVQVV+V ++     E     + FV+ V S +R  G+RV VD+R ++RPGA++++WERKGVPLRLE+GPRDAAA  V  ARR+G E  K ++P GN+F   ++ EL+  QA +L  A  R ++R F VDTY EM+A L  G  + +G F   WK D+ NE  IK+ C+  +RCYP D  G+    A    RKC   GEPATHIALF RAF
Sbjct:  106 PRAEDFSAWYASVISSGDLAEGSPVKGCMVIKPHGYAVWELLRDDLDASIKASGAKNAYFPLLIPQSFLSREAAHVDGFAKECAIVTHHRLRAVPGVDGAAATVEVDPDAALEEPLIIRPTSETMIWSMFAKWIQSHRDLPLAINQWANVVRWEMRTRPFLRTTEFLWQEGHTAHASPEEARARAQQMIDVYADTAERMLAIPVTVGSKSPRERFAGAEDTLTIEAVMPNGWALQAGTSHYLGTAFADAFDVTYQDETGERQPVYASSWGVSTRLMGALIMTHSDDTGLALPPAVAPVQVVLV-VIATKSPEAAAVVSPFVDEVTSRLRAAGVRVEVDERAHLRPGARYYEWERKGVPLRLEVGPRDAAARTVMAARRVGAERAKFSMPVGNDFEGTVRAELDALQAGMLDAARARTAARIFDVDTYAEMEAALGSGDADRVGLFRVAWKCDEANELAIKDACKGGVRCYPRD--GQ----AAAAGRKCLGGGEPATHIALFGRAF 604          
BLAST of NO01G04920 vs. NCBI_GenBank
Match: XP_005709850.1 (proline--tRNA ligase [Chondrus crispus] >CDF39556.1 proline--tRNA ligase [Chondrus crispus])

HSP 1 Score: 612.5 bits (1578), Expect = 1.700e-171
Identity = 296/474 (62.45%), Postives = 367/474 (77.43%), Query Frame = 0
Query:  224 MVIKPYGMALWDALREELDKRIKATGAQNAYFPLFIPRSFLSKEAEHVDGFAKECAVVTHHRLCADPSGAPG-LIPDPTAKLEEPLVVRPTSETVIWNMFSKWIGSHRDLPLKINQWANVVRWEMRTRPFLRSAEFLWQEGHTAHATREEALVCAKEQLDLYASVCEDMLALPVIKGIKSETERFAGADETFTIEALMQNGWALQSGTSHFLGQNFARAFDVFFQTKEGGREMVWATSWGVSTRLIGALVMTHSDDKGLVLPPSVAPVQVVVVPIVKGAGSEEDDRTTAFVNTVVSAMRTQGIRVLVDDRPNMRPGAKFFDWERKGVPLRLEIGPRDAAAGAVTLARRMGGEKETVPAGNNFGHVIQKELEGCQASLLSKAEERVSSRTFRVDTYEEMKARLREGGREEIGFFLAHWKDDKENEAKIKEDCRATIRCYPLDLNGEGSMGARVGERKCFYSGEPATHIALFARAF 697
            MVI+P+G A+W+ LR+ELD RIK +GA+NAYFPL IP+SFLSKEA HVDGF+KECAVVTHHRL A P   PG L PDP AKLEEPL+VRPTSET+IW+MF +WI S+RDLPL +NQWANVVRWEMRTRPFLR++EFLWQEGHTAHAT EEA   AKE + LYA V   MLA+PV+ G+KS +ERFAGA++T+TIE LMQNGWALQ+ TSHFLGQNFA+AFDV +++ +G  E VWATSWG++TR+IGAL+MTHSDD GLVLPP+VAPVQV +V I K    E+      F +   S ++ +G+RV VDDRPNMRPGAK+++WERKGVPLR+EIGPRDAA  AV  A+R+GG K+++P   +F  V    LE  Q  +L +AEER+ SRT RV +Y EMK  +  GG E+ G FL  WK D  NE K++E+ +AT+RCYPL+   E  +G     + C YSG+PATH+A+FAR +
Sbjct:    1 MVIRPHGFAIWEFLRDELDSRIKKSGARNAYFPLLIPQSFLSKEAAHVDGFSKECAVVTHHRLRAVPGAPPGNLEPDPDAKLEEPLIVRPTSETIIWHMFGRWIQSYRDLPLALNQWANVVRWEMRTRPFLRTSEFLWQEGHTAHATAEEADAKAKEMIHLYADVTRQMLAIPVVMGVKSPSERFAGAEDTYTIEGLMQNGWALQAATSHFLGQNFAKAFDVTYKSSDGDEEHVWATSWGITTRMIGALIMTHSDDTGLVLPPAVAPVQVALVLIFK--SEEQRKAVVQFADAAFSRLKARGLRVAVDDRPNMRPGAKYYEWERKGVPLRMEIGPRDAAKNAVFAAKRIGGAKQSIPVDEDFEAVTCSLLEEIQQEMLQRAEERLKSRTRRVASYAEMKDLVAAGG-EDSGMFLVPWKCDSGNERKVREETKATLRCYPLE-GQEECIG-----KDCIYSGDPATHMAVFARNY 465          
BLAST of NO01G04920 vs. NCBI_GenBank
Match: XP_005534840.1 (proline--tRNA ligase [Cyanidioschyzon merolae strain 10D] >BAM80233.1 proline--tRNA ligase [Cyanidioschyzon merolae strain 10D])

HSP 1 Score: 610.9 bits (1574), Expect = 4.900e-171
Identity = 302/518 (58.30%), Postives = 372/518 (71.81%), Query Frame = 0
Query:  194 ITPRDENYSQWYLDVIAAADLVDQSPVKGCMVIKPYGMALWDALREELDKRIKATGAQNAYFPLFIPRSFLSKEAEHVDGFAKECAVVTHHRLCADPSGAPG-LIPDPTAKLEEPLVVRPTSETVIWNMFSKWIGSHRDLPLKINQWANVVRWEMRTRPFLRSAEFLWQEGHTAHATREEALVCAKEQLDLYASVCEDMLALPVIKGIKSETERFAGADETFTIEALMQNGWALQSGTSHFLGQNFARAFDVFFQTKEGG-REMVWATSWGVSTRLIGALVMTHSDDKGLVLPPSVAPVQVVVVPIVKGAGSEEDDRTTAFVNTVVSAMRTQGIRVLVDDRPNMRPGAKFFDWERKGVPLRLEIGPRDAAAGAVTLARRMGGEKETVPAGNNFGHVIQKELEGCQASLLSKAEERVSSRTFRVDTYEEMKARLREGGREE-------------IGFFLAHWKDDKENEAKIKEDCRATIRCYPLDLNGEGSMGARVGERKCFYSGEPATHIALFARAF 697
            ITPR  +Y+QWYLDVIAAA L D SPVKG +V +P+G A+W+ +REELD+RI+ TGAQN  FPL IP+SFL +EAEHV GFAKECAVVTHHRL A P GAPG L PDP A+LEEPLVVRPTSET++W+MF +WI S+RDLPL +NQW NVVRWE+RTRPFLR+ EF WQEGHTAHAT  EA   A+E L +Y    E+ LA+PVI G KS +ERFAGA+ETFT+EA+MQNGWALQSGTSHFLGQNFARAFDV +Q+ + G RE+VWATSWG+STR+IGAL+MTHSDD GLVLPP VAPVQVV+VPI +   + E          +  A+   G+RV VD R ++RPGAK+F+WER+GVPLR+E+G RD  A  + L  R    KE +   N++   +   L+  Q  L + A+  +   T RV++Y+EMK  L    ++               GFFL  W DD  NEA IK+DC+ TIRCYPLD   E         +KCFYSG PATH+A+FAR++
Sbjct:   87 ITPRAVSYAQWYLDVIAAAQLADSSPVKGSLVFRPHGWAIWELIREELDRRIRQTGAQNVSFPLLIPQSFLCREAEHVQGFAKECAVVTHHRLRAAPDGAPGALEPDPQARLEEPLVVRPTSETIVWHMFGRWIQSYRDLPLMVNQWCNVVRWELRTRPFLRTLEFFWQEGHTAHATSAEAEAKAREMLTVYQKFLEEWLAIPVIVGTKSSSERFAGAEETFTLEAIMQNGWALQSGTSHFLGQNFARAFDVEYQSADSGVRELVWATSWGLSTRVIGALIMTHSDDHGLVLPPRVAPVQVVIVPI-QSKDATEQSLVRQRCQEMQDALERAGVRVHVDARDHIRPGAKYFEWERRGVPLRIEVGMRDLQAEQIVLVDRCLRSKEKLAFDNHWTKSVIARLDAFQERLFNNAKGFLREHTRRVESYDEMKRFLTPSNQDAAAYGNESNDEQHITGFFLVPWHDDATNEAIIKQDCKMTIRCYPLDSQDEAR------GKKCFYSGRPATHMAIFARSY 597          
BLAST of NO01G04920 vs. NCBI_GenBank
Match: CBJ31687.1 (Proline--tRNA ligase, central part [Ectocarpus siliculosus])

HSP 1 Score: 607.8 bits (1566), Expect = 4.100e-170
Identity = 298/482 (61.83%), Postives = 356/482 (73.86%), Query Frame = 0
Query:   92 VESLRAAIGAKGDEIRALKGSGADKAALQPLITELLGLKKQYEEETGEPFDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQYADRASLVITPRDENYSQWYLDVIAAADLVDQSPVKGCMVIKPYGMALWDALREELDKRIKATGAQNAYFPLFIPRSFLSKEAEHVDGFAKECAVVTHHRLCADPSGAPGLIPDPTAKLEEPLVVRPTSETVIWNMFSKWIGSHRDLPLKINQWANVVRWEMRTRPFLRSAEFLWQEGHTAHATREEALVCAKEQLDLYASVCEDMLALPVIKGIKSETERFAGADETFTIEALMQNGWALQSGTSHFLGQNFARAFDVFFQTKEGGREMVWATSWGVSTRLIGALVMTHSDDKGLVLPPSVAPVQVVVVPIVKGAGSEEDDRTTAFVNTVVSAMRTQGIRVLVDDRPNMRPGAKFFDWERKGVPLRLEIGPRDAAAGAVTLARRMGG 574
            VE+L A+I AKGDEIR+LK  GADK +L P I EL+ LK  +E  TG PFD                                          +   +AS  ITPR EN+SQWYLD+IAA+++ + SP KGCMVI+P+GMA+WDA ++++DKRIK     NAYFPL IP+SFL+KEAEHVDGFAKECAVVTHHRLC    G   LIPDP AKLEEPLVVRPTSETVIW M+ KWI S+RDLPLK+NQWANVVRWEMRTRP LRSAEFLWQEGHTAHAT+EEAL CA+E L  Y++ C + LALP + G+KS  ERFAGADET+TIEALMQNGWALQSGTSHFLGQNFARAF+V++QT +  RE+VWATSWGV+TRL+GA+VMTHSDD GL LPP+VAP QVV+VPI KG G E+ D     V+ VV  ++  G+RV VD+RPNMRPGAK+F WE KGVPL +E+GP++  AG   + ++ GG
Sbjct:   13 VETLTASIKAKGDEIRSLKEGGADKESLGPTIAELVALKADFERVTGSPFD--------------------TPKKTKAKKTAPADDKKGGNASKADQQASRRITPRAENFSQWYLDIIAASEMTENSPTKGCMVIRPWGMAIWDAFKDDMDKRIKTYDVDNAYFPLLIPQSFLTKEAEHVDGFAKECAVVTHHRLCKSDDGT--LIPDPEAKLEEPLVVRPTSETVIWTMYRKWIDSYRDLPLKLNQWANVVRWEMRTRPLLRSAEFLWQEGHTAHATKEEALSCAQEMLVEYSTACRETLALPTVMGVKSPKERFAGADETYTIEALMQNGWALQSGTSHFLGQNFARAFEVYYQTPDEKRELVWATSWGVTTRLMGAMVMTHSDDFGLRLPPAVAPKQVVIVPITKGPG-EDTDLVNKAVDGVVDQLKAAGVRVKVDERPNMRPGAKYFQWEAKGVPLPVELGPKNPKAGVAIVLKKKGG 471          
BLAST of NO01G04920 vs. NCBI_GenBank
Match: WP_013455822.1 (proline--tRNA ligase [Marivirga tractuosa] >ADR23680.1 prolyl-tRNA synthetase [Marivirga tractuosa DSM 4126])

HSP 1 Score: 582.4 bits (1500), Expect = 1.900e-162
Identity = 288/504 (57.14%), Postives = 364/504 (72.22%), Query Frame = 0
Query:  193 VITPRDENYSQWYLDVIAAADLVDQSPVKGCMVIKPYGMALWDALREELDKRIKATGAQNAYFPLFIPRSFLSKEAEHVDGFAKECAVVTHHRLCADPSGAPGLIPDPTAKLEEPLVVRPTSETVIWNMFSKWIGSHRDLPLKINQWANVVRWEMRTRPFLRSAEFLWQEGHTAHATREEALVCAKEQLDLYASVCEDMLALPVIKGIKSETERFAGADETFTIEALMQNGWALQSGTSHFLGQNFARAFDVFFQTKEGGREMVWATSWGVSTRLIGALVMTHSDDKGLVLPPSVAPVQVVVVPIVKGAGSEEDDRTTAFVNTVVSAMRTQGIRVLVDDRPNMRPGAKFFDWERKGVPLRLEIGPRDAAAGAVTLARRMGGEKETVPAGNNFGHVIQKELEGCQASLLSKAEERVSSRTFRVDTYEEMKARLREGGREEIGFFLAHWKDDKENEAKIKEDCRATIRCYPLDLNGEGSMGARVGERKCFYSGEPATHIALFARAF 697
            V+  R E+YS WY +++  ADL + S V+GCM+IKPYG ++W+ ++ ELD   K TG QNAYFPLFIP+S+LSKEA+HV+GFAKECAVVTH+RL  D +G  G++ DP AKLEE L+VRPTSET+IWN +  W+ S+RDLPL INQWANVVRWEMRTR FLR+AEFLWQEGHTAHAT++EA+   +  +++YA   E+ +ALPVIKG+KSE+ERFAGA ET+ IE LMQ+G ALQ+GTSHFLGQNFA+AFDV F TKEG +E VW TSWGVSTRL+GALVM HSDD+GLVLPP +AP+QVV+VPI K    EE  + T     +  +++ + I V  DDR   +PG KF +WE KGVPLR+ IGPRD   G V LARR   EK+TV        VI+  LE  Q ++ +KA+   +  T++VDTYE+ K++L + G    GF  AHW    E E KIKE+ +ATIRC PLD   EG         KC YSG+P+    LFA+A+
Sbjct:    4 VLPKRSEDYSLWYNELVKKADLAENSAVRGCMIIKPYGFSIWEKMQRELDDMFKETGHQNAYFPLFIPKSYLSKEADHVEGFAKECAVVTHYRLKNDENG-KGIVVDPDAKLEEELIVRPTSETIIWNTYRNWVQSYRDLPLLINQWANVVRWEMRTRLFLRTAEFLWQEGHTAHATKQEAIEETERMINIYADFAEEFMALPVIKGLKSESERFAGALETYCIEGLMQDGKALQAGTSHFLGQNFAKAFDVKFATKEGKQEFVWGTSWGVSTRLMGALVMAHSDDEGLVLPPRLAPIQVVIVPIYK--TDEEQQKITEVAENLRKSLKKKRITVKFDDRDTHKPGFKFAEWELKGVPLRIAIGPRDLDNGTVELARRDTKEKQTVSI-EGIESVIEDTLEIIQENIYNKAKNFRTENTYKVDTYEDFKSQLEKTG----GFISAHWDGTAETEDKIKEETKATIRCIPLDAPEEGG--------KCIYSGKPSNKRVLFAKAY 491          
BLAST of NO01G04920 vs. NCBI_GenBank
Match: WP_004330435.1 (MULTISPECIES: proline--tRNA ligase [Porphyromonas] >EEK16268.1 proline--tRNA ligase [Porphyromonas uenonis 60-3] >EFR35248.1 proline--tRNA ligase [Porphyromonas asaccharolytica PR426713P-I])

HSP 1 Score: 580.5 bits (1495), Expect = 7.000e-162
Identity = 283/503 (56.26%), Postives = 364/503 (72.37%), Query Frame = 0
Query:  194 ITPRDENYSQWYLDVIAAADLVDQSPVKGCMVIKPYGMALWDALREELDKRIKATGAQNAYFPLFIPRSFLSKEAEHVDGFAKECAVVTHHRLCADPSGAPGLIPDPTAKLEEPLVVRPTSETVIWNMFSKWIGSHRDLPLKINQWANVVRWEMRTRPFLRSAEFLWQEGHTAHATREEALVCAKEQLDLYASVCEDMLALPVIKGIKSETERFAGADETFTIEALMQNGWALQSGTSHFLGQNFARAFDVFFQTKEGGREMVWATSWGVSTRLIGALVMTHSDDKGLVLPPSVAPVQVVVVPIVKGAGSEEDDRTTAFVNTVVSAMRTQGIRVLVDDRPNMRPGAKFFDWERKGVPLRLEIGPRDAAAGAVTLARRMGGEKETVPAGNNFGHVIQKELEGCQASLLSKAEERVSSRTFRVDTYEEMKARLREGGREEIGFFLAHWKDDKENEAKIKEDCRATIRCYPLDLNGEGSMGARVGERKCFYSGEPATHIALFARAF 697
            +TPRDENYSQWY D++  A L + S V+GCMVIKPYG  +W+ ++++LD+R K TG  NAYFPLFIP+S+LS+EAEHV+GFAKECAVVTH+RL  + +G  G+  DP AKLEE L+VRPTSET+IW+ +  WI S+RDLPL  NQWANVVRWEMRTR FLR+AEFLWQEGHTAHAT+EEA+  A++ + +Y     +MLALPVI G+KSETERFAGA +T+TIEA+MQ+G ALQSGTSHFLGQNFA+AFDV F  KEG R+ VWATSWGVSTRL+GAL+M HSDD GLVLPP +AP+QVV+VPI K    EE  R     + +VS +R  G+ V +DD  N +PG KF ++E KGVP+RL +G RD   G V +ARR    KET+P      H I++ LE  Q++L +++ + +  RT+  D+Y+E K R+ +G     GFFL HW    E EA+IKE+ +ATIRC P D+  E          +C  +G P+    + AR++
Sbjct:    9 LTPRDENYSQWYQDIVVKAGLAENSSVRGCMVIKPYGYGIWEKMQQDLDRRFKETGHSNAYFPLFIPKSYLSREAEHVEGFAKECAVVTHYRLRTNEAG-DGVEVDPNAKLEEELIVRPTSETIIWSTYKNWIQSYRDLPLLCNQWANVVRWEMRTRLFLRTAEFLWQEGHTAHATQEEAIAEARKMIGVYEDFAREMLALPVIVGVKSETERFAGAIDTYTIEAMMQDGKALQSGTSHFLGQNFAKAFDVTFLDKEGNRDYVWATSWGVSTRLVGALIMAHSDDNGLVLPPRIAPIQVVIVPIYK--SEEELQRIHETADKIVSELRQHGVSVQIDDNDNKKPGWKFAEYEMKGVPVRLALGMRDLEHGTVEVARRDTLTKETMPLEGISAH-IEQLLEDIQSNLYNRSLQSLKERTYICDSYDEFKERIEDG-----GFFLCHWDGTAETEARIKEETKATIRCIPRDIPSEPG--------RCMVTGRPSKCRVIIARSY 494          
BLAST of NO01G04920 vs. NCBI_GenBank
Match: EEN82203.1 (proline--tRNA ligase [Porphyromonas endodontalis ATCC 35406])

HSP 1 Score: 580.5 bits (1495), Expect = 7.000e-162
Identity = 293/504 (58.13%), Postives = 368/504 (73.02%), Query Frame = 0
Query:  194 ITPRDENYSQWYLDVIAAADLVDQSPVKGCMVIKPYGMALWDALREELDKRIKATGAQNAYFPLFIPRSFLSKEAEHVDGFAKECAVVTHHRLCADPSGAPGLIPDPTAKLEEPLVVRPTSETVIWNMFSKWIGSHRDLPLKINQWANVVRWEMRTRPFLRSAEFLWQEGHTAHATREEALVCAKEQLDLYASVCEDMLALPVIKGIKSETERFAGADETFTIEALMQNGWALQSGTSHFLGQNFARAFDVFFQTKEGGREMVWATSWGVSTRLIGALVMTHSDDKGLVLPPSVAPVQVVVVPIVKGAGSEEDDRT-TAFVNTVVSAMRTQGIRVLVDDRPNMRPGAKFFDWERKGVPLRLEIGPRDAAAGAVTLARRMGGEKETVPAGNNFGHVIQKELEGCQASLLSKAEERVSSRTFRVDTYEEMKARLREGGREEIGFFLAHWKDDKENEAKIKEDCRATIRCYPLDLNGEGSMGARVGERKCFYSGEPATHIALFARAF 697
            +TPR ENYSQWY D++  ADL + S V+GCMVIKPYG A+W+ ++ ELDKR K TG  NAYFPLFIP+S+LS+EA+HV+GFAKECAVVTH+RL   P G+ G++ DP AKLEE L+VRPTSET+IW+ +  WI S+RDLP+  NQWANVVRWEMRTR FLR+AEFLWQEGHTAHATREEA+  A++ L++Y    E +LA+PVI+G+KSETERFAGA +T+TIEALMQ+G ALQSGTSHFLGQNFA+AFDV+F  KEG RE+VWATSWGVSTRL+GAL+M+HSDD GLVLPPS+AP+QVV+VPI K   +EE   T    V  ++  +R +GI V +DD  N +PG KF ++E KG+P+RL +G RD   G V +ARR    KETV A       I+  L+  Q ++  KA     + T  VDTYEE K  + +G     GF LAHW    E EA+IKE+ +ATIRC P  L G+ + G       C  +G+P+    LFARA+
Sbjct:   32 LTPRSENYSQWYQDLVTKADLAENSAVRGCMVIKPYGYAIWEKMQAELDKRFKETGHVNAYFPLFIPKSYLSREADHVEGFAKECAVVTHYRLKNSPDGS-GVVVDPEAKLEEELIVRPTSETIIWSTYKNWIQSYRDLPVLCNQWANVVRWEMRTRLFLRTAEFLWQEGHTAHATREEAVAEAEKMLEVYGDFAEKVLAVPVIRGVKSETERFAGAVDTYTIEALMQDGKALQSGTSHFLGQNFAKAFDVYFLNKEGQRELVWATSWGVSTRLMGALIMSHSDDNGLVLPPSLAPIQVVIVPIYK---TEEHLATIRERVEPLIKDLRARGISVKLDDNDNKKPGWKFAEYELKGIPVRLALGARDLEQGTVEVARRDTLTKETV-AFEGIADHIESLLQSIQKNIYDKALAFREASTRTVDTYEEFKTEIEKG-----GFILAHWDGTPETEARIKEETKATIRCIP--LGGDPTPGV------CMVTGKPSKQRVLFARAY 517          
BLAST of NO01G04920 vs. NCBI_GenBank
Match: WP_040581248.1 (proline--tRNA ligase [Porphyromonas endodontalis])

HSP 1 Score: 580.5 bits (1495), Expect = 7.000e-162
Identity = 293/504 (58.13%), Postives = 368/504 (73.02%), Query Frame = 0
Query:  194 ITPRDENYSQWYLDVIAAADLVDQSPVKGCMVIKPYGMALWDALREELDKRIKATGAQNAYFPLFIPRSFLSKEAEHVDGFAKECAVVTHHRLCADPSGAPGLIPDPTAKLEEPLVVRPTSETVIWNMFSKWIGSHRDLPLKINQWANVVRWEMRTRPFLRSAEFLWQEGHTAHATREEALVCAKEQLDLYASVCEDMLALPVIKGIKSETERFAGADETFTIEALMQNGWALQSGTSHFLGQNFARAFDVFFQTKEGGREMVWATSWGVSTRLIGALVMTHSDDKGLVLPPSVAPVQVVVVPIVKGAGSEEDDRT-TAFVNTVVSAMRTQGIRVLVDDRPNMRPGAKFFDWERKGVPLRLEIGPRDAAAGAVTLARRMGGEKETVPAGNNFGHVIQKELEGCQASLLSKAEERVSSRTFRVDTYEEMKARLREGGREEIGFFLAHWKDDKENEAKIKEDCRATIRCYPLDLNGEGSMGARVGERKCFYSGEPATHIALFARAF 697
            +TPR ENYSQWY D++  ADL + S V+GCMVIKPYG A+W+ ++ ELDKR K TG  NAYFPLFIP+S+LS+EA+HV+GFAKECAVVTH+RL   P G+ G++ DP AKLEE L+VRPTSET+IW+ +  WI S+RDLP+  NQWANVVRWEMRTR FLR+AEFLWQEGHTAHATREEA+  A++ L++Y    E +LA+PVI+G+KSETERFAGA +T+TIEALMQ+G ALQSGTSHFLGQNFA+AFDV+F  KEG RE+VWATSWGVSTRL+GAL+M+HSDD GLVLPPS+AP+QVV+VPI K   +EE   T    V  ++  +R +GI V +DD  N +PG KF ++E KG+P+RL +G RD   G V +ARR    KETV A       I+  L+  Q ++  KA     + T  VDTYEE K  + +G     GF LAHW    E EA+IKE+ +ATIRC P  L G+ + G       C  +G+P+    LFARA+
Sbjct:    8 LTPRSENYSQWYQDLVTKADLAENSAVRGCMVIKPYGYAIWEKMQAELDKRFKETGHVNAYFPLFIPKSYLSREADHVEGFAKECAVVTHYRLKNSPDGS-GVVVDPEAKLEEELIVRPTSETIIWSTYKNWIQSYRDLPVLCNQWANVVRWEMRTRLFLRTAEFLWQEGHTAHATREEAVAEAEKMLEVYGDFAEKVLAVPVIRGVKSETERFAGAVDTYTIEALMQDGKALQSGTSHFLGQNFAKAFDVYFLNKEGQRELVWATSWGVSTRLMGALIMSHSDDNGLVLPPSLAPIQVVIVPIYK---TEEHLATIRERVEPLIKDLRARGISVKLDDNDNKKPGWKFAEYELKGIPVRLALGARDLEQGTVEVARRDTLTKETV-AFEGIADHIESLLQSIQKNIYDKALAFREASTRTVDTYEEFKTEIEKG-----GFILAHWDGTPETEARIKEETKATIRCIP--LGGDPTPGV------CMVTGKPSKQRVLFARAY 493          
BLAST of NO01G04920 vs. NCBI_GenBank
Match: WP_027451552.1 (proline--tRNA ligase [Porphyromonas uenonis])

HSP 1 Score: 580.1 bits (1494), Expect = 9.200e-162
Identity = 283/503 (56.26%), Postives = 364/503 (72.37%), Query Frame = 0
Query:  194 ITPRDENYSQWYLDVIAAADLVDQSPVKGCMVIKPYGMALWDALREELDKRIKATGAQNAYFPLFIPRSFLSKEAEHVDGFAKECAVVTHHRLCADPSGAPGLIPDPTAKLEEPLVVRPTSETVIWNMFSKWIGSHRDLPLKINQWANVVRWEMRTRPFLRSAEFLWQEGHTAHATREEALVCAKEQLDLYASVCEDMLALPVIKGIKSETERFAGADETFTIEALMQNGWALQSGTSHFLGQNFARAFDVFFQTKEGGREMVWATSWGVSTRLIGALVMTHSDDKGLVLPPSVAPVQVVVVPIVKGAGSEEDDRTTAFVNTVVSAMRTQGIRVLVDDRPNMRPGAKFFDWERKGVPLRLEIGPRDAAAGAVTLARRMGGEKETVPAGNNFGHVIQKELEGCQASLLSKAEERVSSRTFRVDTYEEMKARLREGGREEIGFFLAHWKDDKENEAKIKEDCRATIRCYPLDLNGEGSMGARVGERKCFYSGEPATHIALFARAF 697
            +TPRDENYSQWY D++  A L + S V+GCMVIKPYG  +W+ ++++LD+R K TG  NAYFPLFIP+S+LS+EAEHV+GFAKECAVVTH+RL  + +G  G+  DP AKLEE L+VRPTSET+IW+ +  WI S+RDLPL  NQWANVVRWEMRTR FLR+AEFLWQEGHTAHAT+EEA+  A++ + +Y     +MLALPVI G+KSETERFAGA +T+TIEA+MQ+G ALQSGTSHFLGQNFA+AFDV F  KEG R+ VWATSWGVSTRL+GAL+M HSDD GLVLPP +AP+QVV+VPI K    EE  R     + +VS +R  G+ V +DD  N +PG KF ++E KGVP+RL +G RD   G V +ARR    KET+P      H I++ LE  Q++L +++ + +  RT+  D+Y+E K R+ +G     GFFL HW    E EA+IKE+ +ATIRC P D+  E          +C  +G P+    + AR++
Sbjct:    9 LTPRDENYSQWYQDIVVKAGLAENSSVRGCMVIKPYGYGIWEKMQQDLDRRFKETGHSNAYFPLFIPKSYLSREAEHVEGFAKECAVVTHYRLRTNEAG-DGVEVDPNAKLEEELIVRPTSETIIWSTYKNWIQSYRDLPLLCNQWANVVRWEMRTRLFLRTAEFLWQEGHTAHATQEEAIAEARKMIGVYEDFAREMLALPVIVGVKSETERFAGAIDTYTIEAMMQDGKALQSGTSHFLGQNFAKAFDVTFLDKEGNRDYVWATSWGVSTRLVGALIMAHSDDNGLVLPPRIAPIQVVIVPIYK--SEEELQRIHETADKIVSELRQHGVSVQIDDNDNKKPGWKFAEYEMKGVPVRLALGMRDLEHGTVEVARRDTLTKETMPLEGISAH-IEQLLEDIQSNLYNRSLKSLKERTYICDSYDEFKERIEDG-----GFFLCHWDGTAETEARIKEETKATIRCIPRDIPSEPG--------RCMVTGRPSKCRVIIARSY 494          
BLAST of NO01G04920 vs. NCBI_GenBank
Match: WP_013759800.1 (proline--tRNA ligase [Porphyromonas asaccharolytica] >AEE12100.1 Prolyl-tRNA synthetase [Porphyromonas asaccharolytica DSM 20707])

HSP 1 Score: 579.7 bits (1493), Expect = 1.200e-161
Identity = 285/503 (56.66%), Postives = 365/503 (72.56%), Query Frame = 0
Query:  194 ITPRDENYSQWYLDVIAAADLVDQSPVKGCMVIKPYGMALWDALREELDKRIKATGAQNAYFPLFIPRSFLSKEAEHVDGFAKECAVVTHHRLCADPSGAPGLIPDPTAKLEEPLVVRPTSETVIWNMFSKWIGSHRDLPLKINQWANVVRWEMRTRPFLRSAEFLWQEGHTAHATREEALVCAKEQLDLYASVCEDMLALPVIKGIKSETERFAGADETFTIEALMQNGWALQSGTSHFLGQNFARAFDVFFQTKEGGREMVWATSWGVSTRLIGALVMTHSDDKGLVLPPSVAPVQVVVVPIVKGAGSEEDDRTTAFVNTVVSAMRTQGIRVLVDDRPNMRPGAKFFDWERKGVPLRLEIGPRDAAAGAVTLARRMGGEKETVPAGNNFGHVIQKELEGCQASLLSKAEERVSSRTFRVDTYEEMKARLREGGREEIGFFLAHWKDDKENEAKIKEDCRATIRCYPLDLNGEGSMGARVGERKCFYSGEPATHIALFARAF 697
            +TPRDENYSQWY D++  A L + S V+GCMVIKPYG  +W+ ++++LD+R K TG  NAYFPLFIP+S+LS+EAEHV+GFAKECAVVTH+RL  + +G  G+  DP AKLEE L+VRPTSET+IW+ +  WI S+RDLPL  NQWANVVRWEMRTR FLR+AEFLWQEGHTAHAT+EEA+  A++ + +Y     +MLALPVI G+KSETERFAGA +T+TIEA+MQ+G ALQSGTSHFLGQNFA+AFDV F  KEG R+ VWATSWGVSTRL+GAL+M HSDD GLVLPP +AP+QVV+VPI K    EE  R     + +VS +R  G+ V +DD  N +PG KF ++E KGVP+RL +G RD   G V +ARR    KET+P      H I++ LE  Q++L +++ + +  RT+  D+Y+E K R+ EGG    GFFL HW    E EA+IKE+ +ATIRC P D+  E          +C  +G P+    + AR++
Sbjct:    9 LTPRDENYSQWYQDIVVKAGLAENSSVRGCMVIKPYGYGIWEKMQQDLDRRFKETGHSNAYFPLFIPKSYLSREAEHVEGFAKECAVVTHYRLRTNEAG-DGVEVDPNAKLEEELIVRPTSETIIWSTYKNWIQSYRDLPLLCNQWANVVRWEMRTRLFLRTAEFLWQEGHTAHATQEEAIAEARKMIGVYEDFAREMLALPVIVGVKSETERFAGAIDTYTIEAMMQDGKALQSGTSHFLGQNFAKAFDVTFLDKEGNRDYVWATSWGVSTRLVGALIMAHSDDNGLVLPPRIAPIQVVIVPIYK--SEEELQRIHETADKIVSELRQHGVSVQIDDNDNKKPGWKFAEYEMKGVPVRLALGMRDLEHGTVEVARRDTLTKETMPLEGISAH-IEQLLEDIQSNLYNRSLQSLKERTYICDSYDEFKERI-EGG----GFFLCHWDGTAETEARIKEETKATIRCIPRDIPSEPG--------RCMVTGRPSKCRVIIARSY 494          
The following BLAST results are available for this feature:
BLAST of NO01G04920 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
OSX69098.12.000e-17259.88hypothetical protein BU14_1865s0001 [Porphyra umbi... [more]
XP_005709850.11.700e-17162.45proline--tRNA ligase [Chondrus crispus] >CDF39556.... [more]
XP_005534840.14.900e-17158.30proline--tRNA ligase [Cyanidioschyzon merolae stra... [more]
CBJ31687.14.100e-17061.83Proline--tRNA ligase, central part [Ectocarpus sil... [more]
WP_013455822.11.900e-16257.14proline--tRNA ligase [Marivirga tractuosa] >ADR236... [more]
WP_004330435.17.000e-16256.26MULTISPECIES: proline--tRNA ligase [Porphyromonas]... [more]
EEN82203.17.000e-16258.13proline--tRNA ligase [Porphyromonas endodontalis A... [more]
WP_040581248.17.000e-16258.13proline--tRNA ligase [Porphyromonas endodontalis][more]
WP_027451552.19.200e-16256.26proline--tRNA ligase [Porphyromonas uenonis][more]
WP_013759800.11.200e-16156.66proline--tRNA ligase [Porphyromonas asaccharolytic... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL005nonsL005Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR047ncniR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR091ngnoR091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK007772NSK007772Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G04920.1NO01G04920.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|577552gene_518Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100042g42gene1208Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G04920.1NO01G04920.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G04920 ID=NO01G04920|Name=NO01G04920|organism=Nannochloropsis oceanica|type=gene|length=2130bp
ACAGAGACCTACCCACGCATGCCGCCTCCGCCTATCCTGGGTGGCTTTCG
TCTCCTTATTGCCACCAGCGGCATGCTTCTCCTCCTGACTCGACGCCTGT
CCTTGACGGCCGCATTTGTCCCGAAACGCTGCCCCTCGACTCTCAATCGC
ATCCACTCCTCCCGCTCCCAATCCTCTTCCCACTCCTCCTCTTCCTCTTT
CAGGTCTTCTTCCTCCTTGTTTTCCCCCCATAGAAGAAGAAGTACCGGTG
CTTACCATTTGTTGAGCAGCACCACTTCTTCGGGCCCCGCGGTGGAGAGT
CTTCGAGCCGCGATTGGTGCTAAGGGCGATGAGATCCGTGCGTTAAAAGG
CAGCGGAGCCGACAAAGCAGCTCTTCAGCCGCTGATTACCGAATTGTTGG
GGCTTAAGAAGCAGTATGAAGAGGAGACAGGCGAACCGTTTGACCCGCCC
AAGGCCGGAGGTAGTGATGGAGGAGGAAAAAAGAAGAAGGCGAGTGGCGG
CAGCAGCAGCAGCAAAAAGAAAGTCAAGCCCAAGAACAACAACGGAGAAG
ACGACGACGGCATCATGATGCAATACGCAGATCGGGCCTCTCTTGTTATC
ACCCCACGAGATGAAAACTACTCGCAGTGGTACCTGGACGTGATTGCCGC
GGCTGATCTCGTTGATCAAAGCCCCGTGAAAGGCTGCATGGTAATCAAAC
CCTATGGCATGGCCTTGTGGGATGCTTTGAGGGAAGAACTCGACAAGCGA
ATCAAGGCCACAGGAGCTCAAAATGCGTATTTCCCCCTTTTCATCCCTCG
TTCTTTCCTGAGTAAGGAGGCTGAGCACGTGGATGGCTTCGCGAAGGAAT
GTGCTGTGGTCACACACCATCGCTTGTGCGCGGATCCCTCAGGTGCCCCT
GGATTGATCCCGGACCCGACTGCAAAACTGGAAGAGCCGTTGGTGGTGAG
ACCGACGTCGGAAACCGTTATTTGGAATATGTTTAGCAAGTGGATTGGCT
CCCACCGGGACTTGCCGTTGAAAATCAACCAATGGGCGAATGTCGTCAGG
TGGGAGATGCGGACGAGGCCATTTCTGCGGAGTGCCGAGTTTTTGTGGCA
GGAGGGGCATACGGCCCATGCGACACGGGAGGAGGCTTTGGTGTGCGCTA
AGGAACAGCTTGACTTGTACGCAAGCGTATGCGAGGACATGTTGGCTTTG
CCTGTGATCAAGGGGATAAAAAGCGAGACCGAGAGGTTCGCCGGGGCCGA
TGAAACCTTTACGATCGAGGCGTTGATGCAAAATGGATGGGCTTTACAAA
GCGGGACTAGCCATTTTTTGGGGCAGAATTTTGCACGGGCATTCGACGTG
TTTTTTCAGACGAAGGAGGGAGGGAGGGAGATGGTGTGGGCGACGAGTTG
GGGTGTGAGCACGCGGTTGATTGGTGCATTGGTGATGACGCACAGTGACG
ACAAGGGCCTAGTACTGCCCCCGTCGGTGGCGCCGGTGCAGGTGGTAGTT
GTGCCGATTGTGAAGGGGGCGGGAAGCGAGGAGGACGACCGTACGACGGC
GTTTGTGAATACGGTGGTGTCGGCGATGCGGACACAGGGGATAAGGGTCC
TTGTGGACGACCGGCCGAACATGAGACCAGGAGCCAAATTTTTCGATTGG
GAGAGGAAGGGCGTGCCATTGCGACTGGAGATAGGACCGAGGGACGCCGC
GGCGGGGGCGGTGACTTTGGCGAGGAGAATGGGGGGGGAGAAGGAAACGG
TGCCAGCGGGGAATAACTTCGGGCATGTGATCCAAAAGGAGCTGGAGGGT
TGCCAGGCATCGTTGCTGAGCAAAGCTGAAGAAAGGGTGTCTTCGCGTAC
GTTTCGAGTAGACACGTATGAGGAGATGAAGGCAAGGTTGCGGGAGGGAG
GGAGGGAGGAGATTGGGTTCTTCTTGGCTCACTGGAAGGATGATAAGGAG
AATGAGGCGAAGATAAAGGAGGACTGTCGGGCCACCATCAGGTGCTACCC
ACTTGATCTGAATGGGGAGGGATCGATGGGGGCGAGGGTGGGGGAGAGAA
AGTGTTTTTATTCGGGCGAACCAGCGACGCATATTGCCTTGTTTGCACGG
GCGTTTTAGAGGAAGGGAGGGATCGGGGGA
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protein sequence of NO01G04920.1

>NO01G04920.1-protein ID=NO01G04920.1-protein|Name=NO01G04920.1|organism=Nannochloropsis oceanica|type=polypeptide|length=697bp
MPPPPILGGFRLLIATSGMLLLLTRRLSLTAAFVPKRCPSTLNRIHSSRS
QSSSHSSSSSFRSSSSLFSPHRRRSTGAYHLLSSTTSSGPAVESLRAAIG
AKGDEIRALKGSGADKAALQPLITELLGLKKQYEEETGEPFDPPKAGGSD
GGGKKKKASGGSSSSKKKVKPKNNNGEDDDGIMMQYADRASLVITPRDEN
YSQWYLDVIAAADLVDQSPVKGCMVIKPYGMALWDALREELDKRIKATGA
QNAYFPLFIPRSFLSKEAEHVDGFAKECAVVTHHRLCADPSGAPGLIPDP
TAKLEEPLVVRPTSETVIWNMFSKWIGSHRDLPLKINQWANVVRWEMRTR
PFLRSAEFLWQEGHTAHATREEALVCAKEQLDLYASVCEDMLALPVIKGI
KSETERFAGADETFTIEALMQNGWALQSGTSHFLGQNFARAFDVFFQTKE
GGREMVWATSWGVSTRLIGALVMTHSDDKGLVLPPSVAPVQVVVVPIVKG
AGSEEDDRTTAFVNTVVSAMRTQGIRVLVDDRPNMRPGAKFFDWERKGVP
LRLEIGPRDAAAGAVTLARRMGGEKETVPAGNNFGHVIQKELEGCQASLL
SKAEERVSSRTFRVDTYEEMKARLREGGREEIGFFLAHWKDDKENEAKIK
EDCRATIRCYPLDLNGEGSMGARVGERKCFYSGEPATHIALFARAF*
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Synonyms
Publications