NO01G04920, NO01G04920 (gene) Nannochloropsis oceanica

Overview
NameNO01G04920
Unique NameNO01G04920
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2130
Alignment locationchr1:1301932..1304061 -

Link to JBrowse

Properties
Property NameValue
DescriptionProlyl-trna synthetase
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:1301932..1304061 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006433prolyl-tRNA aminoacylation
GO:0006418tRNA aminoacylation for protein translation
GO:0006412translation
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004827proline-tRNA ligase activity
GO:0000166nucleotide binding
GO:0005524ATP binding
GO:0004812aminoacyl-tRNA ligase activity
GO:0003824catalytic activity
GO:0000166nucleotide binding
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
GO:0016020membrane
GO:0005737cytoplasm
Vocabulary: INTERPRO
TermDefinition
IPR009068S15_NS1_RNA-bd
IPR017449Pro-tRNA_synth_II
IPR006195aa-tRNA-synth_II
IPR004154Anticodon-bd
IPR002314aa-tRNA-synt_IIb_cons-dom
IPR016061Pro-tRNA_ligase_II_C
IPR000738WHEP-TRS
Homology
BLAST of NO01G04920 vs. NCBI_GenBank
Match: EWM29397.1 (prolyl-trna synthetase [Nannochloropsis gaditana])

HSP 1 Score: 962.2 bits (2486), Expect = 8.600e-277
Identity = 502/697 (72.02%), Postives = 557/697 (79.91%), Query Frame = 0
Query:    1 MPPPPILGGFRLLIATSGMLLLLTRRLSLTAAFV-PKRCPSTLNRIHSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPAVESLRAAIGAKGDEIRALKGSGADKAALQPLITELLGLKKQYEEETGEPFDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQYADRASLVITPRDENYSQWYLDVIAAADLVDQSPVKGCMVIKPYGMALWDALREELDKRIKATGAQNAYFPLFIPRSFLSKEAEHVDGFAKECAVVTHHRLCADPSGAPGLIPDPTAKLEEPLVVRPTSETVIWNMFSKWIGSHRDLPLKINQWANVVRWEMRTRPFLRSAEFLWQEGHTAHATREEALVCAKEQLDLYASVCEDMLALPVIKGIKSETERFAGADETFTIEALMQNGWALQSGTSHFLGQNFARAFDVFFQTKEGGREMVWATSWGVSTRLIGALVMTHSDDKGLVLPPSVAPVQVVVVPIVKGAGSEEDDRTTAFVNTVVSAMRTQGIRVLVDDRPNMRPGAKFFDWERKGVPLRLEIGPRDAAAGAVTLARRMGGEKETVPAGNNFGHVIQKELEGCQASLLSKAEERVSSRTFRVDTYEEMKARLREGGREEIGFFLAHWKDDKENEAKIKEDCRATIRCYPLDLNGEGSMGARVGERKCFYSGEPATHIALFARAF 697
            M P P+L G RLL  ++GM+LL T RL+  AA+V P+  P+  N +  +                                         PA+E+LR AIG KGDEIR LK  GADKAALQPL++ELL LK Q+E+  G P+D          XXXXXXXXXXXXXXX                 Q+ADR+SL ITPRDENYSQWYLDVIAAADLVDQSPVKGCMVIKPYGMALWDALR+ELDKRIKA GAQNAYFPLFIPRSFLSKEAEHV+GFAKECAVVTHHRLC DP+G PGL+PDP+A+LEEPL+VRPTSET+IWNMF KWI SHRDLPLKINQWANVVRWEMRTRPFLRS+EFLWQEGHTAHA+REEA+  A++QLDLY +VC DMLALPV+KG+KS +ERFAGA+ETFTIEALMQNGWALQSGTSHFLGQNFARAFDV FQT EG RE+VWATSWGVSTRLIGALVMTHSDDKGLVLPPSVAPVQVVVVPI+KGAGSEEDDRTTAF+NTV SA+RTQ +RV VD+R NMRPGAK+F+WERKGVP+RLEIGPRDAAAG VTLARR GG KET+PAGN FGHVIQ ELE CQ+ LL +AE+RV+S T+RVD Y EMK RL  GGRE+IGFFLA WKDD  NEA IKEDCRATIRCYPLDLN +     RV  RKCFYSGEPATHIALFARA+
Sbjct:    1 MLPQPLLRGRRLLFGSAGMILLFTGRLAPLAAWVAPRPSPAPRNYLPQAFASLSSYSLGPFSASTRLDRRRTKGHARSRLFSSSTPRVSSPALETLREAIGRKGDEIRGLKVGGADKAALQPLVSELLDLKAQFEDVAGVPYD-------PPKXXXXXXXXXXXXXXXKTKLAAGDADEEEGVMKQHADRSSLAITPRDENYSQWYLDVIAAADLVDQSPVKGCMVIKPYGMALWDALRDELDKRIKANGAQNAYFPLFIPRSFLSKEAEHVEGFAKECAVVTHHRLCVDPAGGPGLVPDPSAQLEEPLIVRPTSETMIWNMFGKWITSHRDLPLKINQWANVVRWEMRTRPFLRSSEFLWQEGHTAHASREEAVGYARDQLDLYGNVCRDMLALPVVKGVKSASERFAGAEETFTIEALMQNGWALQSGTSHFLGQNFARAFDVDFQTAEGTRELVWATSWGVSTRLIGALVMTHSDDKGLVLPPSVAPVQVVVVPILKGAGSEEDDRTTAFMNTVASALRTQNVRVHVDNRANMRPGAKYFEWERKGVPIRLEIGPRDAAAGVVTLARRTGGAKETIPAGNTFGHVIQNELEACQSYLLEEAEKRVASHTYRVDAYVEMKERLAGGGREDIGFFLAPWKDDAVNEAAIKEDCRATIRCYPLDLNADPD---RVQARKCFYSGEPATHIALFARAY 687          
BLAST of NO01G04920 vs. NCBI_GenBank
Match: XP_009032575.1 (hypothetical protein AURANDRAFT_18779 [Aureococcus anophagefferens] >EGB12959.1 hypothetical protein AURANDRAFT_18779 [Aureococcus anophagefferens])

HSP 1 Score: 683.7 bits (1763), Expect = 5.900e-193
Identity = 335/505 (66.34%), Postives = 393/505 (77.82%), Query Frame = 0
Query:  194 ITPRDENYSQWYLDVIAAADLVDQSPVKGCMVIKPYGMALWDALREELDKRIKATGAQNAYFPLFIPRSFLSKEAE--HVDGFAKECAVVTHHRLCADPSGAPGLIPDPTAKLEEPLVVRPTSETVIWNMFSKWIGSHRDLPLKINQWANVVRWEMRTRPFLRSAEFLWQEGHTAHATREEALVCAKEQLDLYASVCEDMLALPVIKGIKSETERFAGADETFTIEALMQNGWALQSGTSHFLGQNFARAFDVFFQTKEGGREMVWATSWGVSTRLIGALVMTHSDDKGLVLPPSVAPVQVVVVPIVKGAGSEEDDRTTAFVNTVVSAMRTQGIRVLVDDRPNMRPGAKFFDWERKGVPLRLEIGPRDAAAGAVTLARRMGGEKETVPAGNNFGHVIQKELEGCQASLLSKAEERVSSRTFRVDTYEEMKARLREGGREEIGFFLAHWKDDKENEAKIKEDCRATIRCYPLDLNGEGSMGARVGERKCFYSGEPATHIALFARAF 697
            IT   E++S WY DVI  ADLVD SPVKGCMVIKP+GMA+WD LR+ELD RIKA+GA+NAYFPL IPRSFL+KEAE  HV+GFAKECAVVTHHRL AD  G  GL PDP A+L+EPL++RPTSET+IW+MF KWI SHRDLPLKINQWANVVRWEMRTRPFLRS+EFLWQEGHTAHATR+EAL  A+E LD+YA V E  LA+PV++G KS  ERFAGADET+TIEALM NGWALQSGTSHFLGQNFARAFDV FQ K+  RE+VWATSWGVSTRL+GALVMTHSDD GLVLPP VAPVQV VVPI +       +   A V+ +V+  +  G+RV VD+RPNMRPGAKFF+WERKGVPLR+E+GPRDAA G V +A R+GGEK +V A +     +   LE  QA L + A  R+   T  V +Y+E+KA++     +++GFF  +W  D  NE  IKEDC ATIRCYPLD   +      +  + CFYSG+PATH+ALFARAF
Sbjct:  114 ITSASEDFSAWYADVIRGADLVDASPVKGCMVIKPWGMAVWDRLRDELDGRIKASGAENAYFPLLIPRSFLAKEAEHCHVEGFAKECAVVTHHRLAADGKG--GLEPDPAAELDEPLIIRPTSETMIWHMFGKWINSHRDLPLKINQWANVVRWEMRTRPFLRSSEFLWQEGHTAHATRDEALATAEEMLDVYAEVVEHFLAVPVVRGAKSAIERFAGADETYTIEALMPNGWALQSGTSHFLGQNFARAFDVQFQNKDAKRELVWATSWGVSTRLLGALVMTHSDDAGLVLPPRVAPVQVAVVPITRKNDDAGTEAVDALVDGLVAECKALGVRVKVDERPNMRPGAKFFEWERKGVPLRVEVGPRDAAEGVVVVASRLGGEKRSVAAADAAAD-LAASLEDIQARLFAAAAARLDGGTVDVGSYDELKAKI---DADDLGFFRVYWAADDANEKAIKEDCSATIRCYPLDAQRD------LAGKACFYSGKPATHVALFARAF 606          
BLAST of NO01G04920 vs. NCBI_GenBank
Match: XP_005835077.1 (prolyl-tRNA synthetase, partial [Guillardia theta CCMP2712] >EKX48097.1 prolyl-tRNA synthetase, partial [Guillardia theta CCMP2712])

HSP 1 Score: 677.2 bits (1746), Expect = 5.500e-191
Identity = 332/510 (65.10%), Postives = 398/510 (78.04%), Query Frame = 0
Query:  188 DRASLVITPRDENYSQWYLDVIAAADLVDQSPVKGCMVIKPYGMALWDALREELDKRIKATGAQNAYFPLFIPRSFLSKEAEHVDGFAKECAVVTHHRLCADPSGAPGLIPDPTAKLEEPLVVRPTSETVIWNMFSKWIGSHRDLPLKINQWANVVRWEMRTRPFLRSAEFLWQEGHTAHATREEALVCAKEQLDLYASVCEDMLALPVIKGIKSETERFAGADETFTIEALMQNGWALQSGTSHFLGQNFARAFDVFFQTKEGGREMVWATSWGVSTRLIGALVMTHSDDKGLVLPPSVAPVQVVVVPIVKGAGSEEDDRTTAFVNTVVSAMRTQGIRVLVDD-RPNMRPGAKFFDWERKGVPLRLEIGPRDAAAGAVTLARRMGGEKETVPAGNNFGHVIQKELEGCQASLLSKAEERVSSRTFRVDTYEEMKARLREGGREEIGFFLAHWKDDKENEAKIKEDCRATIRCYPLDLNGEGSMGARVGERKCFYSGEPATHIALFARAF 697
            ++ + VITPR  +YSQWY DVI AA +VDQSPVKGCMVI+P+GMA+WD L++EL++RIK TG QNAYFPLFIP SFLSKEAEHV+GFAKECAVVTHHRLCADPSG  GL+ DP AKLEEPL+VRPTSET+IW+MF KWI S+RDLPLK+NQWANVVRWE+RTRPFLRSAEFLWQEGHTAHA++EEA  CA+E LD+YA V E +LA+PV+KG KS +ERFAGADET+TIEALMQNGWALQSGTSHFLGQNFA+AFDV FQ  +   E+VWATSWGVSTRL+GALVMTHSDD GLVLPP V+PVQVV++P+  G G +E+D        V +A+++QGIR  VDD R NM+PG KF++WER+GVPLR+E+GPRD  A  V       G  +      NF   I+K+L+  Q  LL  A +R+   T  V +Y+E+K +L  G   E GFFL  WKDD  NE  IK + +ATIRC+P   NG G+    V  +KCFYSG+ ATH+ALFARAF
Sbjct:    1 EKENFVITPRATDYSQWYQDVIQAAQMVDQSPVKGCMVIRPWGMAVWDELKDELNRRIKETGTQNAYFPLFIPMSFLSKEAEHVEGFAKECAVVTHHRLCADPSG-KGLMADPEAKLEEPLIVRPTSETIIWDMFRKWISSYRDLPLKVNQWANVVRWELRTRPFLRSAEFLWQEGHTAHASKEEADGCAREMLDVYAEVAEGILAIPVVKGTKSPSERFAGADETYTIEALMQNGWALQSGTSHFLGQNFAKAFDVKFQNADQSAELVWATSWGVSTRLLGALVMTHSDDAGLVLPPQVSPVQVVIIPV--GRGKKENDE-----KKVTAALKSQGIRYKVDDSRDNMKPGPKFYEWERRGVPLRVEVGPRDVDANKV--RGEDDGRGDLPFDQTNFAQDIKKQLQDIQTGLLDAARKRLEENTKTVASYDELKTKLENG---ETGFFLVPWKDDAVNEETIKTETKATIRCFPFAHNGPGA----VNGKKCFYSGKDATHMALFARAF 493          
BLAST of NO01G04920 vs. NCBI_GenBank
Match: EJK63110.1 (hypothetical protein THAOC_16250 [Thalassiosira oceanica])

HSP 1 Score: 650.6 bits (1677), Expect = 5.500e-183
Identity = 351/606 (57.92%), Postives = 421/606 (69.47%), Query Frame = 0
Query:   95 LRAAIGAKGDEIRALKGSGADKAALQPLITELLGLKKQYEEETGEPFDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQYADRASLVITPRDENYSQWYLDVIAAADLVDQSPVKGCMVIKPYGMALWDALREELDKRIKATGAQNAYFPLFIPRSFLSKEAEHVDGFAKECAVVTHHRLCADPSGAPGLIPDPTAKLEEPLVVRPTSETVIWNMFSKWIGSHRDLPLKINQWANVVRWEMRTRPFLRSAEFLWQEGHTAHATREEALVCAKEQLDLYASVCEDMLALPVIKGIKSETERFAGADETFTIEALMQNGWALQSGTSHFLGQNFARAFDVFFQTKEGGREMVWATSWGVSTRLIGALVMTHSDDKGLVLPPSVAPVQVVVVPIVKGAGSEEDD-RTTAFVNTVVSAMRTQGIRVLVDDRPNMRPGAKFFDWERKGVPLRLEIGPRDAAAGAVTLARRMGGEKETVPAGNNFGHVIQKELEGCQASLLSKAEERVSSRTFRVDTYEEMKARLREGGREEI---GFFLAHWKDDKENEAKIKEDCRATIRCYPLDLNGEGSMGARVGERKCFYSGEPATHIALFARAF 697
            L   I  KGD IR +K  G  K  L P ITELL LK Q +        XXXXXXXXXXXXXXXXXX                              S  ITPR ENYS+WY D+I   +L + SPV+GCMVIKP+GM+LWD +R +LD RIK  GA+NAYFPL IP+SFLSKEAEHVDGFAKECAVVTHHRL ADPSG  GLI DP A+LE+PL++RPTSET+IWNMF KWI SHRDLPLK+NQWANV+RWEMRTRPFLR++EFLWQEGHTAHAT E A+  +K+ LD YA +CE +LA+PV+KG KS +ERFAGA+ET+TIEALMQNGWALQSGTSHFLGQ+F +AFDV FQ  +G ++MVW TSWGVSTRL+GAL+MTHSDD GLVLPP VAPVQVVVVPI      EE        ++ +V+ ++  G++V VDDR  +R GAK+F+WERKGVPLR+E+GPRD   G      R+G E +   + +         L+  Q  LL  A+ER++     + TY+EMK  L +    E    G +L  WK D  NE KIK++C+ATIRCYP D+N  G        +KCFYSGE ATH+ALF RAF
Sbjct:   81 LEGKIKDKGDAIRRMKDEGISKEDLAPHITELLDLKAQLDPSAXXXXXXXXXXXXXXXXXXXXXXXV----------------------------ESDYITPRAENYSKWYNDIIRVCELAETSPVRGCMVIKPWGMSLWDQVRNDLDARIKDHGAENAYFPLLIPKSFLSKEAEHVDGFAKECAVVTHHRLTADPSGEGGLIADPEAELEDPLIIRPTSETMIWNMFKKWIVSHRDLPLKMNQWANVMRWEMRTRPFLRTSEFLWQEGHTAHATAEGAIKDSKDMLDQYADMCEKLLAIPVVKGAKSPSERFAGAEETYTIEALMQNGWALQSGTSHFLGQSFGKAFDVTFQDSDGSQQMVWGTSWGVSTRLLGALIMTHSDDAGLVLPPRVAPVQVVVVPIPAKKNDEEGKAELENALDKLVADLKGSGLKVKVDDRDYVRNGAKYFEWERKGVPLRVELGPRDVKGGVCVFKYRVGSEGKETISLDEVAAKATAGLDSVQEFLLDSAKERLAGNLNLMATYDEMKDALEKDEASEYDGPGLYLVPWKCDAANEEKIKDECKATIRCYPTDVNEAGMHEG----KKCFYSGEDATHMALFGRAF 654          
BLAST of NO01G04920 vs. NCBI_GenBank
Match: XP_002287422.1 (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >EED94865.1 predicted protein, partial [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 649.8 bits (1675), Expect = 9.500e-183
Identity = 317/513 (61.79%), Postives = 386/513 (75.24%), Query Frame = 0
Query:  188 DRASLVITPRDENYSQWYLDVIAAADLVDQSPVKGCMVIKPYGMALWDALREELDKRIKATGAQNAYFPLFIPRSFLSKEAEHVDGFAKECAVVTHHRLCADPSGAPGLIPDPTAKLEEPLVVRPTSETVIWNMFSKWIGSHRDLPLKINQWANVVRWEMRTRPFLRSAEFLWQEGHTAHATREEALVCAKEQLDLYASVCEDMLALPVIKGIKSETERFAGADETFTIEALMQNGWALQSGTSHFLGQNFARAFDVFFQTKEGGREMVWATSWGVSTRLIGALVMTHSDDKGLVLPPSVAPVQVVVVPIVKGAGSEEDD-RTTAFVNTVVSAMRTQGIRVLVDDRPNMRPGAKFFDWERKGVPLRLEIGPRDAAAGAVTLARRMGGEKETVPAGNNFGHVIQKELEGCQASLLSKAEERVSSRTFRVDTYEEMKARLREGGREEI---GFFLAHWKDDKENEAKIKEDCRATIRCYPLDLNGEGSMGARVGERKCFYSGEPATHIALFARAF 697
            D  S  IT R ENYS+WY D+I   DL D SPV+GCMVIKP+GM++WD +R +LD RIK  GA+NAYFPL IP+SFLSKEAEHVDGFAKECAVVTHHRL  DPSG  GLI DP A+LE+PL++RPTSET+IWNMF KWI SHRDLPLK+NQWANV+RWEMRTRPFLR++EFLWQEGHTAHAT E AL  +K  LD YA +C+++LA+PVIKG KS +ERFAGA+ETFTIEALMQNGWALQSGTSHFLGQ+F +AFDV FQ  EG ++ VW TSWGVSTRLIGAL+MTHSDD GLVLPP VAPVQVVVVPI      EE        ++ +V+ +++ G++V VDDR  +R GAK+F+WERKGVPLR+E+GPRD   G      R+G E++   + +    +  K L+  Q +LL  A+ER+++    + TY++MK  L +    E    G +L  WK + ENE KIKE+C+ATIRCYP D+N  G        +KCFYSGE ATH+ALF RAF
Sbjct:    9 DAESDYITSRAENYSKWYNDIIRVCDLADNSPVRGCMVIKPWGMSIWDQIRNDLDARIKEHGAENAYFPLLIPKSFLSKEAEHVDGFAKECAVVTHHRLTVDPSGEGGLIADPEAELEDPLIIRPTSETMIWNMFKKWIVSHRDLPLKMNQWANVMRWEMRTRPFLRTSEFLWQEGHTAHATSEGALEDSKLMLDQYAEMCQNLLAIPVIKGAKSPSERFAGAEETFTIEALMQNGWALQSGTSHFLGQSFGKAFDVTFQDAEGKQQDVWGTSWGVSTRLIGALIMTHSDDAGLVLPPRVAPVQVVVVPIPPKKNDEEGKVALNNALDKMVANLKSAGLKVKVDDRDYVRNGAKYFEWERKGVPLRIELGPRDVKGGVCVFKYRVGKEEKETVSLDEVSVMAVKGLDELQENLLESAKERLAANINMMATYDQMKEALEKDEASEYNGPGLYLVPWKCNAENEDKIKEECKATIRCYPTDVNEAGMAEG----KKCFYSGEDATHMALFGRAF 517          
BLAST of NO01G04920 vs. NCBI_GenBank
Match: GAX13437.1 (prolyl-tRNA synthetase [Fistulifera solaris])

HSP 1 Score: 646.7 bits (1667), Expect = 8.000e-182
Identity = 349/608 (57.40%), Postives = 426/608 (70.07%), Query Frame = 0
Query:   94 SLRAAIGAKGDEIRALKGSGADKAALQPLITELLGLKKQYEEETGEPFDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQYADRASLVITPRDENYSQWYLDVIAAADLVDQSPVKGCMVIKPYGMALWDALREELDKRIKATGAQNAYFPLFIPRSFLSKEAEHVDGFAKECAVVTHHRLCADPSGAPGLIPDPTAKLEEPLVVRPTSETVIWNMFSKWIGSHRDLPLKINQWANVVRWEMRTRPFLRSAEFLWQEGHTAHATREEALVCAKEQLDLYASVCEDMLALPVIKGIKSETERFAGADETFTIEALMQNGWALQSGTSHFLGQNFARAFDVFFQTKEGGREMVWATSWGVSTRLIGALVMTHSDDKGLVLPPSVAPVQVVVV--PIVKGAGSEEDDRTTAFVNTVVSAMRTQGIRVLVDDRPNMRPGAKFFDWERKGVPLRLEIGPRDAAAGAVTLARRMGGEKETVPAGNNFGHVIQKELEGCQASLLSKAEERVSSRTFRVDTYEEMKARLREGGREEI---GFFLAHWKDDKENEAKIKEDCRATIRCYPLDLNGEGSMGARVGERKCFYSGEPATHIALFARAF 697
            +L   I + GD+IRALK SGA+K    PL+ ELL LK Q +    +P  XXXXXXXXXXXXXXXXX                                  IT R  +YS+WY D+I  A L + SPV+GCMVIKP+GM+LWD +R ELD +I+  G +NAYFPL IP+SFLSKEAEHVDGFA ECAVVTHHRL ADP G+ GLI DP AKLE+PL++RPTSET+IW MF KWI SHRDLPLKINQWANV+RWEMRTRPFLR++EFLWQEGHTAHAT E+A+  A+  LD+YA +C+D+L++PV+KG+KS +ERFAGA +T+TIEALMQNGWALQSGTSHFLGQ+F  AFDV FQ + G ++ VW TSWGVSTRL+GAL+MTHSDD GLVLPP VAPVQVV+V  P  K  G E   R  A V+ +V  ++ +GIRV VDDR  +R GAK+F+WERKGVPLR+EIGPRD          R+G  ++   +  +   +++  L+  Q++LL +A ER+     +  TY EMK+ L      E    G FL  WK D +NE KIKE+C+ATIRCYPL  N EG        +KCFYSGE ATH+ALF RAF
Sbjct:   48 ALEEKIKSTGDQIRALKESGANKDTFAPLVQELLKLKAQLDPALAKPTXXXXXXXXXXXXXXXXXXD--------------------------------FITARSVDYSKWYNDLIRVAGLAETSPVRGCMVIKPWGMSLWDRVRNELDAKIQNRGVENAYFPLLIPKSFLSKEAEHVDGFATECAVVTHHRLTADPDGS-GLIADPEAKLEDPLIIRPTSETMIWYMFRKWINSHRDLPLKINQWANVMRWEMRTRPFLRTSEFLWQEGHTAHATAEDAVEEARAMLDVYADLCQDLLSIPVVKGVKSPSERFAGASDTYTIEALMQNGWALQSGTSHFLGQSFGNAFDVTFQDQNGEQQPVWGTSWGVSTRLLGALIMTHSDDAGLVLPPKVAPVQVVIVTIPPKKSDGPEVQQRLNAAVDDLVEKLKAKGIRVKVDDRDYVRSGAKYFEWERKGVPLRIEIGPRDVQNEVCVFKYRVGDVEKKSVSWVDAAQMVESGLKEFQSALLERANERLQDGIRQGATYAEMKSLLENDEASEYNGPGLFLVPWKCDADNERKIKEECKATIRCYPLKENQEGMHEG----QKCFYSGEEATHMALFGRAF 618          
BLAST of NO01G04920 vs. NCBI_GenBank
Match: XP_005705121.1 (prolyl-tRNA synthetase [Galdieria sulphuraria] >EME28601.1 prolyl-tRNA synthetase [Galdieria sulphuraria])

HSP 1 Score: 645.2 bits (1663), Expect = 2.300e-181
Identity = 312/504 (61.90%), Postives = 384/504 (76.19%), Query Frame = 0
Query:  194 ITPRDENYSQWYLDVIAAADLVDQSPVKGCMVIKPYGMALWDALREELDKRIKATGAQNAYFPLFIPRSFLSKEAEHVDGFAKECAVVTHHRLCADPSGAPGLIPDPTAKLEEPLVVRPTSETVIWNMFSKWIGSHRDLPLKINQWANVVRWEMRTRPFLRSAEFLWQEGHTAHATREEALVCAKEQLDLYASVCEDMLALPVIKGIKSETERFAGADETFTIEALMQNGWALQSGTSHFLGQNFARAFDVFFQTKEGGREMVWATSWGVSTRLIGALVMTHSDDKGLVLPPSVAPVQVVVVPIVKGAGSEEDDRTTAFVNTVVSAMRTQGIRVLVDDRPNMRPGAKFFDWERKGVPLRLEIGPRDAAAGAVTLARRMGGEKE-TVPAGNNFGHVIQKELEGCQASLLSKAEERVSSRTFRVDTYEEMKARLREGGREEIGFFLAHWKDDKENEAKIKEDCRATIRCYPLDLNGEGSMGARVGERKCFYSGEPATHIALFARAF 697
            ITPR E+YS WYL VI AA L DQS VKGC+VI+PYG A+W+ LR+ LDK IK TGAQNAYFPLFIP+SFLSKEAEHV+GFAKECAVVTHHRL  + +    L PDP A LEEPL+VRPTSET+IWNMF KWI S+RDLPL INQWANVVRWE+RTRPFLR+ EFLWQEGHTAH   +EA+  AKE L++Y  +CE++LA+PVIKG KS +ERFAGA+ETFTIEA+MQNGWALQSGTSHFLGQNFA+AF V++       ++VWATSWG STRL+GAL+MTHSDD GLVLPP VAP+QV+++PI K    +ED  T      ++  ++   IR  +DDR  +RPG+K+F+WERKG+PLR+EIGPRD   G VT+A R+G +K+  +P   +    IQ++LE  Q  L  +A+ER+ SRTFR  +++EMK RL E   ++ GFFL  WK +  +E +IK + +ATIRCYP D      M   V   KCFYSGEPATH+ALFARA+
Sbjct:   76 ITPRSEDYSAWYLHVIQAAQLADQSAVKGCLVIRPYGYAVWELLRDHLDKLIKETGAQNAYFPLFIPQSFLSKEAEHVEGFAKECAVVTHHRLRLNTNST--LEPDPEAMLEEPLIVRPTSETLIWNMFQKWISSYRDLPLCINQWANVVRWELRTRPFLRTTEFLWQEGHTAHTNAKEAMDKAKEMLNVYTQLCEELLAIPVIKGCKSPSERFAGAEETFTIEAMMQNGWALQSGTSHFLGQNFAKAFQVYYTDTSSQEQLVWATSWGASTRLLGALIMTHSDDIGLVLPPKVAPIQVIIIPIWKSQVDKED--TLRVSQKLLEQLKGAQIRAKLDDRDYIRPGSKYFEWERKGIPLRIEIGPRDVVDGVVTIASRIGNQKKYALPCNESLTMHIQQQLENMQRCLFQQAKERMDSRTFRNVSFDEMKRRLNEKDIQKQGFFLVPWKCNAIHEERIKAETKATIRCYPFD------MQHLVKNEKCFYSGEPATHMALFARAY 569          
BLAST of NO01G04920 vs. NCBI_GenBank
Match: GAX11240.1 (prolyl-tRNA synthetase [Fistulifera solaris])

HSP 1 Score: 644.8 bits (1662), Expect = 3.000e-181
Identity = 342/609 (56.16%), Postives = 416/609 (68.31%), Query Frame = 0
Query:   94 SLRAAIGAKGDEIRALKGSGADKAALQPLITELLGLKKQYEEETGEPFDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQYADRASLVITPRDENYSQWYLDVIAAADLVDQSPVKGCMVIKPYGMALWDALREELDKRIKATGAQNAYFPLFIPRSFLSKEAEHVDGFAKECAVVTHHRLCADPSGAPGLIPDPTAKLEEPLVVRPTSETVIWNMFSKWIGSHRDLPLKINQWANVVRWEMRTRPFLRSAEFLWQEGHTAHATREEALVCAKEQLDLYASVCEDMLALPVIKGIKSETERFAGADETFTIEALMQNGWALQSGTSHFLGQNFARAFDVFFQTKEGGREMVWATSWGVSTRLIGALVMTHSDDKGLVLPPSVAPVQVVVV--PIVKGAGSEEDDRTTAFVNTVVSAMRTQGIRVLVDDRPNMRPGAKFFDWERKGVPLRLEIGPRDAAAGAVTLARRMGG-EKETVPAGNNFGHVIQKELEGCQASLLSKAEERVSSRTFRVDTYEEMKARLREGGREEI---GFFLAHWKDDKENEAKIKEDCRATIRCYPLDLNGEGSMGARVGERKCFYSGEPATHIALFARAF 697
            +L   I A GD+IRALK SGA K    PL+ EL  LK Q +    +P                                      XXXXXX      S  IT R  +YS+WY D+I  A L + SPV+GCMVIKP+GM+LWD +R ELD +I+  G +NAYFPL IP+SFLSKEAEHVDGFA ECAVVTHHRL ADP G+ GLI DP AKLE+PL++RPTSET+IW MF KWI SHRDLPLKINQWANV+RWEMRTRPFLR++EFLWQEGHTAHAT E+A+  A+  LD+YA +C+D+L++PV+KG+KS +ERFAGA +T+TIEALMQNGWALQSGTSHFLGQ+F  AFDV FQ + G ++ VW TSWGVSTRL+GAL+MTHSDD GLVLPP VAPVQVV+V  P  K  G E   +  A V+ +V  +R +GIRV VDDR  +R GAK+F+WERKGVPLR+EIGPRD          R+G  EK++VP   +   +++  L+  Q++LL +A  R+     +  TY EMK+ L      E    G FL  WK D +NE KIKE+C+ATIRCYPL  N EG        +KCFYSGE ATH+ALF RAF
Sbjct:   42 ALEERIKATGDQIRALKESGASKDTFAPLVQELQELKAQLDPTLAKP----------------------------------TKKTXXXXXXXXXXXXSDFITARSVDYSKWYNDLIRVAGLAETSPVRGCMVIKPWGMSLWDRVRTELDAKIQNRGVENAYFPLLIPKSFLSKEAEHVDGFATECAVVTHHRLTADPDGS-GLIADPEAKLEDPLIIRPTSETMIWYMFRKWINSHRDLPLKINQWANVMRWEMRTRPFLRTSEFLWQEGHTAHATAEDAVEEARAMLDVYADLCQDLLSIPVVKGVKSPSERFAGASDTYTIEALMQNGWALQSGTSHFLGQSFGNAFDVTFQDQNGEQQPVWGTSWGVSTRLLGALIMTHSDDAGLVLPPKVAPVQVVIVTIPPKKSDGPEVQQKLDATVDDLVEKLRAKGIRVKVDDRDYVRSGAKYFEWERKGVPLRIEIGPRDVQNEVCVFKYRVGDVEKKSVPL-VDAPEMVESGLKEFQSALLERANARLQDGIRQGATYAEMKSLLENDEASEYNGPGLFLVPWKCDADNERKIKEECKATIRCYPLKENQEGMHKG----QKCFYSGEEATHMALFGRAF 610          
BLAST of NO01G04920 vs. NCBI_GenBank
Match: XP_002176892.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC51355.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 641.3 bits (1653), Expect = 3.400e-180
Identity = 332/610 (54.43%), Postives = 410/610 (67.21%), Query Frame = 0
Query:   94 SLRAAIGAKGDEIRALKGSGADKAALQPLITELLGLKKQYEEETGEPFDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQYADRASLVITPRDENYSQWYLDVIAAADLVDQSPVKGCMVIKPYGMALWDALREELDKRIKATGAQNAYFPLFIPRSFLSKEAEHVDGFAKECAVVTHHRLCADPSGAPGLIPDPTAKLEEPLVVRPTSETVIWNMFSKWIGSHRDLPLKINQWANVVRWEMRTRPFLRSAEFLWQEGHTAHATREEALVCAKEQLDLYASVCEDMLALPVIKGIKSETERFAGADETFTIEALMQNGWALQSGTSHFLGQNFARAFDVFFQTKEGGREMVWATSWGVSTRLIGALVMTHSDDKGLVLPPSVAPVQVVVVPI-VKGAGSEEDDRTTAFVNTVVSAMRTQGIRVLVDDRPNMRPGAKFFDWERKGVPLRLEIGPRDAAAGAVTLARRMG---GEKETVPAGNNFGHVIQKELEGCQASLLSKAEERVSSRTFRVDTYEEMKARLREGGREEI---GFFLAHWKDDKENEAKIKEDCRATIRCYPLDLNGEGSMGARVGERKCFYSGEPATHIALFARAF 697
            S+   I  KGDEIRALK SGADK+ + PLI ELL LK + +    EP                                            +  +  S  IT R+ +YS+WY D++    L + SPV+GCMVIKP+GM+LWD +R ELD +I+A GA+NAYFPL IP+SFLSKEAEHVDGFAKECAVVTHHRL  +P G+ GL+ DP A LE+PL+VRPTSET+IW MF KWI SHRDLPLKINQWANV+RWEMRTRPFLR++EFLWQEGHTAHATR+ A+  A+  LD YA++CED+LA+PV++G+KS +ERFAGA++T+TIEALMQNGWALQSGTSHFLGQ+F +AF+V FQ + G ++ VW TSWG STRLIGAL+MTHSDD GLVLPP VAP QV++VPI  K   +E        +N + ++++ +G+R  VDDR  +R GAKFF+WERKGVPLR+EIGPRD          R G    EK+T+P            L+  Q  LL  A+ R+++      TYEEM+  L      E    G FL  WK D ENE KIKE+C+ATIRCYPLD N +G        +KCFYSG  ATH+ALF RAF
Sbjct:   93 SVEEQIKVKGDEIRALKESGADKSTVAPLIDELLALKAKLDPSILEP-------------------------PKKAPKAQTQPKKQQNQSGKRENDDSDFITAREVDYSKWYNDIVRVTGLAETSPVRGCMVIKPWGMSLWDRVRTELDAKIQAHGAENAYFPLLIPQSFLSKEAEHVDGFAKECAVVTHHRLTTNPDGS-GLMVDPEAALEDPLIVRPTSETMIWYMFRKWIVSHRDLPLKINQWANVMRWEMRTRPFLRTSEFLWQEGHTAHATRDGAIADAQAMLDNYATLCEDLLAMPVVRGVKSPSERFAGAEDTYTIEALMQNGWALQSGTSHFLGQSFGKAFNVTFQDENGTQQDVWGTSWGASTRLIGALIMTHSDDAGLVLPPKVAPAQVIIVPIPPKKDDAETKQAMDIAMNQLTASLKAEGLRFKVDDRDFVRSGAKFFEWERKGVPLRIEIGPRDVRNNVCVFKYRAGENADEKQTIPLSEAAASA-TAGLKSMQQDLLEAAKARLTNGITTDTTYEEMRTFLEADEASEYSGKGLFLVPWKCDAENENKIKEECKATIRCYPLDANKQGLHQG----KKCFYSGHDATHMALFGRAF 671          
BLAST of NO01G04920 vs. NCBI_GenBank
Match: OEU16621.1 (prolyl-tRNA synthetase [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 623.6 bits (1607), Expect = 7.300e-175
Identity = 349/612 (57.03%), Postives = 429/612 (70.10%), Query Frame = 0
Query:   95 LRAAIGAKGDEIRALKGSGADKAALQPLITELLGLKKQYEEETGEPFDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQYADRASLVITPRDENYSQWYLDVIAAADLVDQSPVKGCMVIKPYGMALWDALREELDKRIKATGAQNAYFPLFIPRSFLSKEAEHVDGFAKECAVVTHHRLCADPSGAPGLIPDPTAKLEEPLVVRPTSETVIWNMFSKWIGSHRDLPLKINQWANVVRWEMRTRPFLRSAEFLWQEGHTAHATREEALVCAKEQLDLYASVCEDMLALPVIKGIKSETERFAGADETFTIEALMQNGWALQSGTSHFLGQNFARAFDVFFQTKEGGREMVWATSWGVSTRLIGALVMTHSDDKGLVLPPSVAPVQVVVVPIVKGAGSEEDD-RTTAFVNTVVSAMRTQGIRVLVDDRPNMRPGAKFFDWERKGVPLRLEIGPRDAAAGAVTLARRMGG---EKETVPAGNNFGHVIQKE---LEGCQASLLSKAEERVSSRTFRVDTYEEMKARLREGGREEI---GFFLAHWKDDKENEAKIKEDCRATIRCYPLDLNGEGSMGARVGERKCFYSGEPATHIALFARAF 697
            L   I   GD+IR LK  GADKA + P++ ELL LK Q +    +                  XXXXXXXXXXXXXXXXXXXXXXXXXXX         IT R  +YS+WY D+I  A L + SPV+GCMVIKP+GM+LWD +R +LD+RIK  GA+N YFPL IP+SFLSKEAEHVDGFAKECAVVTHHRL +  +   GLI DP A+LE+PL++RPTSET+IW MF KWI SHRDLPLK+NQWANV+RWEMRTRPFLR++EFLWQEGHTAHAT E AL  A+  ++ YA++CE+++A+PV++G+KS +ERFAGA +TFTIEALMQNGWALQSGTSHFLGQ+F +AFDV FQ  +G  + VW TSWGVSTRLIGAL+MTHSDD GLVLPP VAP+Q+V+VPI      EE        ++ +V+ ++ +G+RV VDDR  MR GAK+F+WERKGVPLR+E+GPRD  + +     R G    EK ++    +    +QK    LE  Q  LL +A  R+S+      +YEEM+  L           G +L  WK D ENE KIK +C+ATIRCYPLD N EG        +KCFYSGE ATH+ALF RA+
Sbjct:   30 LETKIKETGDKIRVLKEEGADKATIAPIVQELLALKTQLDPTFNK---------------AKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFITARAVDYSKWYSDIIRVAGLAETSPVRGCMVIKPWGMSLWDKIRTDLDERIKENGAENCYFPLLIPKSFLSKEAEHVDGFAKECAVVTHHRLKSADNKDDGLIVDPEAELEDPLIIRPTSETMIWYMFRKWINSHRDLPLKVNQWANVMRWEMRTRPFLRTSEFLWQEGHTAHATSEGALDDARTMMEEYATLCENLMAMPVVRGVKSPSERFAGAVDTFTIEALMQNGWALQSGTSHFLGQSFGKAFDVTFQDTDGEEKDVWGTSWGVSTRLIGALIMTHSDDNGLVLPPRVAPIQIVIVPIPPKKNDEEGKIAMDKALDELVAGLKAKGMRVKVDDRDFMRNGAKYFEWERKGVPLRIELGPRDVKSNSCVFKYRAGSGSDEKTSI----DLNDAVQKASDGLESMQEGLLEEARSRLSNGITEDASYEEMRDALDNDEASSYAGPGLYLVPWKCDAENEDKIKTECKATIRCYPLDSNSEGLHEG----KKCFYSGEDATHMALFGRAY 618          
The following BLAST results are available for this feature:
BLAST of NO01G04920 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM29397.18.600e-27772.02prolyl-trna synthetase [Nannochloropsis gaditana][more]
XP_009032575.15.900e-19366.34hypothetical protein AURANDRAFT_18779 [Aureococcus... [more]
XP_005835077.15.500e-19165.10prolyl-tRNA synthetase, partial [Guillardia theta ... [more]
EJK63110.15.500e-18357.92hypothetical protein THAOC_16250 [Thalassiosira oc... [more]
XP_002287422.19.500e-18361.79predicted protein, partial [Thalassiosira pseudona... [more]
GAX13437.18.000e-18257.40prolyl-tRNA synthetase [Fistulifera solaris][more]
XP_005705121.12.300e-18161.90prolyl-tRNA synthetase [Galdieria sulphuraria] >EM... [more]
GAX11240.13.000e-18156.16prolyl-tRNA synthetase [Fistulifera solaris][more]
XP_002176892.13.400e-18054.43predicted protein [Phaeodactylum tricornutum CCAP ... [more]
OEU16621.17.300e-17557.03prolyl-tRNA synthetase [Fragilariopsis cylindrus C... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL005nonsL005Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR047ncniR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR091ngnoR091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK007772NSK007772Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G04920.1NO01G04920.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|577552gene_518Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100042g42gene1208Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G04920.1NO01G04920.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G04920 ID=NO01G04920|Name=NO01G04920|organism=Nannochloropsis oceanica|type=gene|length=2130bp
ACAGAGACCTACCCACGCATGCCGCCTCCGCCTATCCTGGGTGGCTTTCG
TCTCCTTATTGCCACCAGCGGCATGCTTCTCCTCCTGACTCGACGCCTGT
CCTTGACGGCCGCATTTGTCCCGAAACGCTGCCCCTCGACTCTCAATCGC
ATCCACTCCTCCCGCTCCCAATCCTCTTCCCACTCCTCCTCTTCCTCTTT
CAGGTCTTCTTCCTCCTTGTTTTCCCCCCATAGAAGAAGAAGTACCGGTG
CTTACCATTTGTTGAGCAGCACCACTTCTTCGGGCCCCGCGGTGGAGAGT
CTTCGAGCCGCGATTGGTGCTAAGGGCGATGAGATCCGTGCGTTAAAAGG
CAGCGGAGCCGACAAAGCAGCTCTTCAGCCGCTGATTACCGAATTGTTGG
GGCTTAAGAAGCAGTATGAAGAGGAGACAGGCGAACCGTTTGACCCGCCC
AAGGCCGGAGGTAGTGATGGAGGAGGAAAAAAGAAGAAGGCGAGTGGCGG
CAGCAGCAGCAGCAAAAAGAAAGTCAAGCCCAAGAACAACAACGGAGAAG
ACGACGACGGCATCATGATGCAATACGCAGATCGGGCCTCTCTTGTTATC
ACCCCACGAGATGAAAACTACTCGCAGTGGTACCTGGACGTGATTGCCGC
GGCTGATCTCGTTGATCAAAGCCCCGTGAAAGGCTGCATGGTAATCAAAC
CCTATGGCATGGCCTTGTGGGATGCTTTGAGGGAAGAACTCGACAAGCGA
ATCAAGGCCACAGGAGCTCAAAATGCGTATTTCCCCCTTTTCATCCCTCG
TTCTTTCCTGAGTAAGGAGGCTGAGCACGTGGATGGCTTCGCGAAGGAAT
GTGCTGTGGTCACACACCATCGCTTGTGCGCGGATCCCTCAGGTGCCCCT
GGATTGATCCCGGACCCGACTGCAAAACTGGAAGAGCCGTTGGTGGTGAG
ACCGACGTCGGAAACCGTTATTTGGAATATGTTTAGCAAGTGGATTGGCT
CCCACCGGGACTTGCCGTTGAAAATCAACCAATGGGCGAATGTCGTCAGG
TGGGAGATGCGGACGAGGCCATTTCTGCGGAGTGCCGAGTTTTTGTGGCA
GGAGGGGCATACGGCCCATGCGACACGGGAGGAGGCTTTGGTGTGCGCTA
AGGAACAGCTTGACTTGTACGCAAGCGTATGCGAGGACATGTTGGCTTTG
CCTGTGATCAAGGGGATAAAAAGCGAGACCGAGAGGTTCGCCGGGGCCGA
TGAAACCTTTACGATCGAGGCGTTGATGCAAAATGGATGGGCTTTACAAA
GCGGGACTAGCCATTTTTTGGGGCAGAATTTTGCACGGGCATTCGACGTG
TTTTTTCAGACGAAGGAGGGAGGGAGGGAGATGGTGTGGGCGACGAGTTG
GGGTGTGAGCACGCGGTTGATTGGTGCATTGGTGATGACGCACAGTGACG
ACAAGGGCCTAGTACTGCCCCCGTCGGTGGCGCCGGTGCAGGTGGTAGTT
GTGCCGATTGTGAAGGGGGCGGGAAGCGAGGAGGACGACCGTACGACGGC
GTTTGTGAATACGGTGGTGTCGGCGATGCGGACACAGGGGATAAGGGTCC
TTGTGGACGACCGGCCGAACATGAGACCAGGAGCCAAATTTTTCGATTGG
GAGAGGAAGGGCGTGCCATTGCGACTGGAGATAGGACCGAGGGACGCCGC
GGCGGGGGCGGTGACTTTGGCGAGGAGAATGGGGGGGGAGAAGGAAACGG
TGCCAGCGGGGAATAACTTCGGGCATGTGATCCAAAAGGAGCTGGAGGGT
TGCCAGGCATCGTTGCTGAGCAAAGCTGAAGAAAGGGTGTCTTCGCGTAC
GTTTCGAGTAGACACGTATGAGGAGATGAAGGCAAGGTTGCGGGAGGGAG
GGAGGGAGGAGATTGGGTTCTTCTTGGCTCACTGGAAGGATGATAAGGAG
AATGAGGCGAAGATAAAGGAGGACTGTCGGGCCACCATCAGGTGCTACCC
ACTTGATCTGAATGGGGAGGGATCGATGGGGGCGAGGGTGGGGGAGAGAA
AGTGTTTTTATTCGGGCGAACCAGCGACGCATATTGCCTTGTTTGCACGG
GCGTTTTAGAGGAAGGGAGGGATCGGGGGA
back to top

protein sequence of NO01G04920.1

>NO01G04920.1-protein ID=NO01G04920.1-protein|Name=NO01G04920.1|organism=Nannochloropsis oceanica|type=polypeptide|length=697bp
MPPPPILGGFRLLIATSGMLLLLTRRLSLTAAFVPKRCPSTLNRIHSSRS
QSSSHSSSSSFRSSSSLFSPHRRRSTGAYHLLSSTTSSGPAVESLRAAIG
AKGDEIRALKGSGADKAALQPLITELLGLKKQYEEETGEPFDPPKAGGSD
GGGKKKKASGGSSSSKKKVKPKNNNGEDDDGIMMQYADRASLVITPRDEN
YSQWYLDVIAAADLVDQSPVKGCMVIKPYGMALWDALREELDKRIKATGA
QNAYFPLFIPRSFLSKEAEHVDGFAKECAVVTHHRLCADPSGAPGLIPDP
TAKLEEPLVVRPTSETVIWNMFSKWIGSHRDLPLKINQWANVVRWEMRTR
PFLRSAEFLWQEGHTAHATREEALVCAKEQLDLYASVCEDMLALPVIKGI
KSETERFAGADETFTIEALMQNGWALQSGTSHFLGQNFARAFDVFFQTKE
GGREMVWATSWGVSTRLIGALVMTHSDDKGLVLPPSVAPVQVVVVPIVKG
AGSEEDDRTTAFVNTVVSAMRTQGIRVLVDDRPNMRPGAKFFDWERKGVP
LRLEIGPRDAAAGAVTLARRMGGEKETVPAGNNFGHVIQKELEGCQASLL
SKAEERVSSRTFRVDTYEEMKARLREGGREEIGFFLAHWKDDKENEAKIK
EDCRATIRCYPLDLNGEGSMGARVGERKCFYSGEPATHIALFARAF*
back to top
Synonyms
Publications