NO01G04800, NO01G04800 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G04800 vs. NCBI_GenBank
Match: XP_008898508.1 (tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [Phytophthora parasitica INRA-310] >ETN16151.1 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [Phytophthora parasitica INRA-310] >KUF78938.1 tRNA-specific 2-thiouridylase MnmA [Phytophthora nicotianae]) HSP 1 Score: 345.1 bits (884), Expect = 3.200e-91 Identity = 199/455 (43.74%), Postives = 248/455 (54.51%), Query Frame = 0 Query: 16 VAVGLSGGVDSSVAAMLLLQQGYEVVGVHMQNWDTSDEEGMSACPETEDLKDAQEVSKQLGIPFYRADFSRPYWTNVFTPFLEDYERGWTPNPDVLCNREIKFSKFRNFAQEALRTPWVATGHYARLRYPCPPSLPPSSEAIGAPQLLVGVDDSKDQSYFLSHVPSLAFQHTLFPLGHLTKTQVRALATNSGLCTAQKKESMGICFVGKRRMGDFLPEYLKPLPGLLVSVTDGAVLGEQEGGLTLLTVGQGARIGGEATKWFVCGKDMEKGVVWVAPGTNHPALYCDWLLVKEEKFNWI-GRRPRELQRLVRXXXXXXXXXXXXXXXXXXXXXXXXXXXSRIPVSMPFRCEYRVRYRQPLASCTVSL------------------PPSAPG---------LLRIDFDAPQRAVALKQTLALY-DGERCLGGGVIVGVGPSYWERGKELPEERVEW 442 V VG+SGGVDSSVAA+LL +QGY V GV+M+NWD SDEEG SACP + D Q+V +QLGI + + YW VF P LE YE G TPNPD+LCNREIKF F +A++ + +VATGHYA LR + G P L DD+KDQSYFLS V AF + LFPLG + KT+VR +A GLCTA KK+S+GICF+GKR DF+ +Y++ G +V DG + G T TVGQGAR+ G + KWFV GK V VA GT +PAL+ D L +FNW+ G P+EL+ + RC YRVRYRQ L CT+SL P A G LR+DFD PQR V +Q L LY D C GGG I G +Y+E+GK L ++ +W Sbjct: 55 VVVGMSGGVDSSVAALLLKRQGYHVTGVYMKNWDPSDEEGESACPVDSEYLDVQKVCEQLGIEAQMVNLVQSYWNQVFAPCLEGYEEGLTPNPDILCNREIKFKAFTEYAKK-IGADYVATGHYAALR---------PAHGCGPPNLCAAEDDTKDQSYFLSSVDGRAFANVLFPLGGMRKTEVRQIAEREGLCTATKKDSVGICFIGKRNFADFIHQYIERQEGYFYTV-DGEKM-HSHLGFTAYTVGQGARLQGMSAKWFVVGKHKSDHSVIVAEGTRNPALFSDTLFASATEFNWMAGVLPQELRD-----------------------------------TGCMRCFYRVRYRQDLDECTISLVSNHEVRASASKLHDWQPEPLADGEDEESRERSYLRVDFDHPQRGVTPEQALVLYRDDGLCYGGGPIAAAGETYYEQGKPLADDVHDW 462
BLAST of NO01G04800 vs. NCBI_GenBank
Match: KUF85965.1 (hypothetical protein AM588_10002392 [Phytophthora nicotianae]) HSP 1 Score: 345.1 bits (884), Expect = 3.200e-91 Identity = 199/455 (43.74%), Postives = 248/455 (54.51%), Query Frame = 0 Query: 16 VAVGLSGGVDSSVAAMLLLQQGYEVVGVHMQNWDTSDEEGMSACPETEDLKDAQEVSKQLGIPFYRADFSRPYWTNVFTPFLEDYERGWTPNPDVLCNREIKFSKFRNFAQEALRTPWVATGHYARLRYPCPPSLPPSSEAIGAPQLLVGVDDSKDQSYFLSHVPSLAFQHTLFPLGHLTKTQVRALATNSGLCTAQKKESMGICFVGKRRMGDFLPEYLKPLPGLLVSVTDGAVLGEQEGGLTLLTVGQGARIGGEATKWFVCGKDMEKGVVWVAPGTNHPALYCDWLLVKEEKFNWI-GRRPRELQRLVRXXXXXXXXXXXXXXXXXXXXXXXXXXXSRIPVSMPFRCEYRVRYRQPLASCTVSL------------------PPSAPG---------LLRIDFDAPQRAVALKQTLALY-DGERCLGGGVIVGVGPSYWERGKELPEERVEW 442 V VG+SGGVDSSVAA+LL +QGY V GV+M+NWD SDEEG SACP + D Q+V +QLGI + + YW VF P LE YE G TPNPD+LCNREIKF F +A++ + +VATGHYA LR + G P L DD+KDQSYFLS V AF + LFPLG + KT+VR +A GLCTA KK+S+GICF+GKR DF+ +Y++ G +V DG + G T TVGQGAR+ G + KWFV GK V VA GT +PAL+ D L +FNW+ G P+EL+ + RC YRVRYRQ L CT+SL P A G LR+DFD PQR V +Q L LY D C GGG I G +Y+E+GK L ++ +W Sbjct: 55 VVVGMSGGVDSSVAALLLKRQGYHVTGVYMKNWDPSDEEGESACPVDSEYLDVQKVCEQLGIEAQMVNLVQSYWNQVFAPCLEGYEEGLTPNPDILCNREIKFKAFTEYAKK-IGADYVATGHYAALR---------PAHGCGPPNLCAAEDDTKDQSYFLSSVDGRAFANVLFPLGGMRKTEVRQIAEREGLCTATKKDSVGICFIGKRNFADFIHQYIQRQEGYFYTV-DGEKM-HSHLGFTAYTVGQGARLQGMSAKWFVVGKHKSDHSVIVAEGTRNPALFSDTLFASATEFNWMAGVLPQELRD-----------------------------------TGCMRCFYRVRYRQDLDECTISLVSNHEVRASASKLHDWQPEPLADGEDEESRERSYLRVDFDHPQRGVTPEQALVLYRDDGLCYGGGPIAAAGETYYEQGKPLADDVHDW 462
BLAST of NO01G04800 vs. NCBI_GenBank
Match: ETP29343.1 (tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [Phytophthora parasitica P10297] >ETP29361.1 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [Phytophthora parasitica P10297]) HSP 1 Score: 343.2 bits (879), Expect = 1.200e-90 Identity = 198/455 (43.52%), Postives = 247/455 (54.29%), Query Frame = 0 Query: 16 VAVGLSGGVDSSVAAMLLLQQGYEVVGVHMQNWDTSDEEGMSACPETEDLKDAQEVSKQLGIPFYRADFSRPYWTNVFTPFLEDYERGWTPNPDVLCNREIKFSKFRNFAQEALRTPWVATGHYARLRYPCPPSLPPSSEAIGAPQLLVGVDDSKDQSYFLSHVPSLAFQHTLFPLGHLTKTQVRALATNSGLCTAQKKESMGICFVGKRRMGDFLPEYLKPLPGLLVSVTDGAVLGEQEGGLTLLTVGQGARIGGEATKWFVCGKDMEKGVVWVAPGTNHPALYCDWLLVKEEKFNWI-GRRPRELQRLVRXXXXXXXXXXXXXXXXXXXXXXXXXXXSRIPVSMPFRCEYRVRYRQPLASCTVSL------------------PPSAPG---------LLRIDFDAPQRAVALKQTLALY-DGERCLGGGVIVGVGPSYWERGKELPEERVEW 442 V VG+SGGVDSSVAA+LL +QGY V GV+M+NWD SDEEG SACP + D Q+V +QLGI + + YW VF P LE YE G TPNPD+LCNREIKF F +A++ + +VATGHYA LR + G P L DD+KDQSYFLS V AF + LFPLG + KT+VR +A GLCTA KK+S+GICF+GKR DF+ +Y++ G +V DG + G T TVGQGAR+ G + KWFV GK V VA GT +PAL+ D L +FNW+ G P+EL+ + RC YRVRYRQ L CT+SL P A G LR+DFD PQ V +Q L LY D C GGG I G +Y+E+GK L ++ +W Sbjct: 55 VVVGMSGGVDSSVAALLLKRQGYHVTGVYMKNWDPSDEEGESACPVDSEYLDVQKVCEQLGIEAQMVNLVQSYWNQVFAPCLEGYEEGLTPNPDILCNREIKFKAFTEYAKK-IGADYVATGHYAALR---------PAHGCGPPNLCAAEDDTKDQSYFLSSVDGRAFANVLFPLGGMRKTEVRQIAEREGLCTATKKDSVGICFIGKRNFADFIHQYIQRQEGYFYTV-DGEKM-HSHLGFTAYTVGQGARLQGMSAKWFVVGKHKSDHSVIVAEGTRNPALFSDTLFASATEFNWMAGVLPQELRD-----------------------------------TGCMRCFYRVRYRQDLDECTISLVSNHEVRASASKLHDWQPEPLADGEDEESRERSYLRVDFDHPQHGVTPEQALVLYRDDGLCYGGGPIAAAGETYYEQGKPLADDVHDW 462
BLAST of NO01G04800 vs. NCBI_GenBank
Match: GAX99979.1 (Hypothetical protein PINS_007833 [Pythium insidiosum]) HSP 1 Score: 338.2 bits (866), Expect = 3.900e-89 Identity = 198/441 (44.90%), Postives = 241/441 (54.65%), Query Frame = 0 Query: 16 VAVGLSGGVDSSVAAMLLLQQGYEVVGVHMQNWDTSDEEGMSACPETEDLKDAQEVSKQLGIPFYRADFSRPYWTNVFTPFLEDYERGWTPNPDVLCNREIKFSKFRNFAQEALRTPWVATGHYARLRYPCPPSLPPSSEAIGAPQLLVGVDDSKDQSYFLSHVPSLAFQHTLFPLGHLTKTQVRALATNSGLCTAQKKESMGICFVGKRRMGDFLPEYLKPLPGLLVSVTDGAVLGEQEGGLTLLTVGQGARIGGEATKWFVCGKDMEKGVVWVAPGTNHPALYCDWLLVKEEKFNWI-GRRPRELQRLVRXXXXXXXXXXXXXXXXXXXXXXXXXXXSRIPVSMPFRCEYRVRYRQPLASCTVSLPPSAPGL--------------------LRIDFDAPQRAVALKQTLALYDGE-RCLGGGVIVGVGPSYWERGKEL 435 V VG+SGGVDSSV A+LL++ GY V GV M+NWD SDE G ACP+ + +D Q+V + LGI R + + YW +VF P LE YE G TPNPD+LCNREIKF F ++A ++ +VATGHYA LR P P S P P L DD+KDQSYFLS+V AF+ LFPLG L KT+VR +A GL TA K++S+GICF+GKR DF+ +Y+ G V+V DG L + G T TVGQGAR+ G++ KWFV GK V VA GT HPAL+ D L +FNWI G P+EL R RC YRVRYRQ L CTVSL L LR++FD PQR V +Q L LY + C GGG I G SY E K L Sbjct: 306 VVVGMSGGVDSSVTALLLVRAGYRVTGVFMKNWDASDEIGEQACPQDLEFQDVQKVCRHLGIEARRVNLVQSYWNSVFAPCLESYEEGLTPNPDILCNREIKFKAFLDYA-ASIGADYVATGHYAALR-PDPESSSPH------PVLFAAQDDTKDQSYFLSNVAGSAFRRVLFPLGELPKTEVRRIAAXEGLVTATKRDSVGICFIGKRNFADFIHQYIPKQNGFFVTV-DGQQL-QAHNGFTAYTVGQGARLQGKSEKWFVVGKRKRDHAVIVAAGTKHPALFTDSLFASASQFNWIAGSMPQELVTNGR-----------------------------------MRCLYRVRYRQVLGECTVSLVSEQEALTDATQLHDWSVDGDEAPSTFLRVEFDQPQRGVTPQQALVLYRADGLCYGGGPIATAGRSYHELNKPL 701
BLAST of NO01G04800 vs. NCBI_GenBank
Match: XP_012202804.1 (tRNA methyl transferase [Saprolegnia parasitica CBS 223.65] >KDO26366.1 tRNA methyl transferase [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 337.8 bits (865), Expect = 5.100e-89 Identity = 192/449 (42.76%), Postives = 250/449 (55.68%), Query Frame = 0 Query: 16 VAVGLSGGVDSSVAAMLLLQ-QGYEVVGVHMQNWDTSDEEGMSACPETEDLKDAQEVSKQLGIPFYRADFSRPYWTNVFTPFLEDYERGWTPNPDVLCNREIKFSKFRNFAQEALRTPWVATGHYARLRYPCPPSLPPSSEAIGAPQLLVGVDDSKDQSYFLSHVPSLAFQHTLFPLGHLTKTQVRALATNSGLCTAQKKESMGICFVGKRRMGDFLPEYLKPLPGLLVSVTDGAVLGEQEGGLTLLTVGQGARIGGEATKWFVCGKDMEKGVVWVAPGTNHPALYCDWLLVKEEKFNWI-GRRPRELQRLVRXXXXXXXXXXXXXXXXXXXXXXXXXXXSRIPVSMPFRCEYRVRYRQPLASCTVSL------------------PPSAPGLLRIDFDAPQRAVALKQTLALY-DGERCLGGGVIVGVGPSYWERGKELPEERVEWAV 444 V VG+SGGVDSSV A LL Q + VVG++M NWD+SDEEG + CP D + ++V +++GI R DF + YW NVF P L+ + +G TPNPDVLCN+EIKF F A +A G R R C +L +++AI A + +KDQSYFLSHV FQ +FPLG L K +VR +A + LCTA KK+S+GICF+GKR G FL +Y+ P PG VSV D ++ + G + T+GQGA++ G TKWFV GK E V++APGT+HPAL+ D + V+ FNWI G P L R RC+YR RYRQPLA CT+S+ P+ LR+ FD PQR V+ Q+L LY D C GGG I+G GPSYWE+ K LP +W++ Sbjct: 26 VVVGMSGGVDSSVTAYLLHQDKSLHVVGLYMNNWDSSDEEGKATCPADMDYELVRQVCEEIGIECTRVDFVQEYWNNVFEPCLDQFAKGLTPNPDVLCNKEIKFDVFAKHA--------MALG--PRRRLHCDGAL-RAAQAI-AQWHQCALRRNKDQSYFLSHVTGAQFQRVIFPLGGLCKPRVREIAAEANLCTAAKKDSVGICFIGKRSFGSFLSQYVPPRPGSFVSVVDEQIMHAHD-GYSAYTIGQGAKVSGLPTKWFVVGKRDEDAAVFIAPGTHHPALFSDEVFVRASAFNWIQGHMPVALAENGR-----------------------------------LRCQYRARYRQPLAYCTISMASVDDVTSGLSVYQPMAAAPTDEPYLRVQFDVPQRGVSPAQSLVLYEDDGLCYGGGPILGAGPSYWEQQKPLPSPLFDWSM 426
BLAST of NO01G04800 vs. NCBI_GenBank
Match: XP_002902886.1 (tRNA-specific 2-thiouridylase mnmA, putative [Phytophthora infestans T30-4] >EEY56056.1 tRNA-specific 2-thiouridylase mnmA, putative [Phytophthora infestans T30-4]) HSP 1 Score: 336.3 bits (861), Expect = 1.500e-88 Identity = 194/451 (43.02%), Postives = 241/451 (53.44%), Query Frame = 0 Query: 20 LSGGVDSSVAAMLLLQQGYEVVGVHMQNWDTSDEEGMSACPETEDLKDAQEVSKQLGIPFYRADFSRPYWTNVFTPFLEDYERGWTPNPDVLCNREIKFSKFRNFAQEALRTPWVATGHYARLRYPCPPSLPPSSEAIGAPQLLVGVDDSKDQSYFLSHVPSLAFQHTLFPLGHLTKTQVRALATNSGLCTAQKKESMGICFVGKRRMGDFLPEYLKPLPGLLVSVTDGAVLGEQEGGLTLLTVGQGARIGGEATKWFVCGKDMEKGVVWVAPGTNHPALYCDWLLVKEEKFNWI-GRRPRELQRLVRXXXXXXXXXXXXXXXXXXXXXXXXXXXSRIPVSMPFRCEYRVRYRQPLASCTVSLPPSAPG---------------------------LLRIDFDAPQRAVALKQTLALYDGE-RCLGGGVIVGVGPSYWERGKELPEERVEW 442 +SGGVDSSVAA+LL +QGY V GV+M+NWD SDEEG SACP + D Q+V +QLGI + + YW VF P L YE G TPNPD+LCNREIKF F FA++ + VATGHYA LR +E G P L D+SKDQSYFLS V AF + LFPLG + KT+VR +A + GLCTA KK+S+GICF+GKR DF+ +Y++ G +V G G T TVGQGAR+ G + KWFV GK V VA GT +PAL+ D L E+FNW+ G P EL+ R RC YRVRYRQ L CT+SL + LR+DFD PQR V +Q L LY + C GGG I G +Y+E+GK L ++ +W Sbjct: 1 MSGGVDSSVAALLLKRQGYHVTGVYMKNWDPSDEEGESACPVDSEYVDVQKVCEQLGIEAQMVNLVQSYWNQVFAPCLAGYEEGLTPNPDILCNREIKFKAFTEFAKQ-IGADCVATGHYAALR---------PAEKGGPPNLCAAEDESKDQSYFLSSVDGKAFANVLFPLGGMRKTEVRQIAESEGLCTATKKDSVGICFIGKRNFADFIHQYIQRQDGYFYTV--GGEKMHPHHGFTAYTVGQGARLQGMSAKWFVVGKHKFDHSVIVAEGTRNPALFSDALFASAEQFNWMAGDLPPELRDTGR-----------------------------------MRCFYRVRYRQDLDKCTISLVSNREARASASKLHDWQPELVANEEGVENGEKIYLRVDFDHPQRGVTPEQALVLYRSDGLCYGGGPIAAAGQTYYEQGKALADDVHDW 404
BLAST of NO01G04800 vs. NCBI_GenBank
Match: XP_009533571.1 (hypothetical protein PHYSODRAFT_563700 [Phytophthora sojae] >EGZ10826.1 hypothetical protein PHYSODRAFT_563700 [Phytophthora sojae]) HSP 1 Score: 330.9 bits (847), Expect = 6.200e-87 Identity = 194/454 (42.73%), Postives = 245/454 (53.96%), Query Frame = 0 Query: 20 LSGGVDSSVAAMLLLQQGYEVVGVHMQNWDTSDEEGMSACPETEDLKDAQEVSKQLGIPFYRADFSRPYWTNVFTPFLEDYERGWTPNPDVLCNREIKFSKFRNFAQEALRTPWVATGHYARLRYPCPPSLPPSSEAIGAPQLLVGVDDSKDQSYFLSHVPSLAFQHTLFPLGHLTKTQVRALATNSGLCTAQKKESMGICFVGKRRMGDFLPEYLKPLPGLLVSVTDGAVLGEQEGGLTLLTVGQGARIGGEATKWFVCGKDMEKGVVWVAPGTNHPALYCDWLLVKEEKFNWI-GRRPRELQRLVRXXXXXXXXXXXXXXXXXXXXXXXXXXXSRIPVSMPFRCEYRVRYRQPLASCTVSL------------------PPSAP------------GLLRIDFDAPQRAVALKQTLALYDGE-RCLGGGVIVGVGPSYWERGKELPEERVEW 442 +SGGVDSSVAA+LL +QGY V GV+M+NWD SDEEG SACP + D Q+V +QLGI + + YW VF P LE YE G TPNPD+LCNREIKF F +A++ + +VATGHYA LR P+ E G P L D++KDQSYFLS V AF + LFPLG + KT+VR +A + GLCTA KK+S+GICF+GKR DF+ +Y++ G SV DG + + G T TVGQGAR+ G + KWFV GK V VA GT PAL+ D L +FNW+ G P+EL+ R RC YRVRYRQ L CT+SL P A L+++FD PQR V +Q L LY + C GGG I G +Y+E+ K L + +W Sbjct: 1 MSGGVDSSVAALLLKRQGYRVTGVYMKNWDPSDEEGESACPVDAEYLDVQKVCEQLGIEAQMVNLVQSYWNQVFAPCLEGYEEGLTPNPDILCNREIKFKAFTEYAKK-IGADYVATGHYAALR--------PAKEG-GPPNLCAAKDETKDQSYFLSSVDGRAFVNVLFPLGDMCKTEVRRIAASEGLCTAAKKDSVGICFIGKRNFADFIHQYIQRQDGYFYSV-DGEKM-HRHHGFTAYTVGQGARLQGMSAKWFVVGKRKPDHSVIVAEGTRSPALFSDALYASAAQFNWMAGDLPQELRETGR-----------------------------------MRCFYRVRYRQDLDECTLSLVSNREARAGASKLHDWQPEPLASDEDVAGKEREERSYLQVEFDRPQRGVTPEQALVLYRADGLCYGGGPIAAAGKTYYEQQKPLADSVHDW 407
BLAST of NO01G04800 vs. NCBI_GenBank
Match: CCI48127.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 330.9 bits (847), Expect = 6.200e-87 Identity = 189/446 (42.38%), Postives = 239/446 (53.59%), Query Frame = 0 Query: 16 VAVGLSGGVDSSVAAMLLLQQGYEVVGVHMQNWDTSDEEGMSACPETEDLKDAQEVSKQLGIPFYRADFSRPYWTNVFTPFLEDYERGWTPNPDVLCNREIKFSKFRNFAQEALRTPWVATGHYARLRYPCPPSLPPSSEAIGAPQLLVGVDDSKDQSYFLSHVPSLAFQHTLFPLGHLTKTQVRALATNSGLCTAQKKESMGICFVGKRRMGDFLPEYLKPLPGLLVSVTDGAVLGEQEGGLTLLTVGQGARIGGEATKWFVCGKDMEKGVVWVAPGTNHPALYCDWLLVKEEKFNWIGRRPRELQRLVRXXXXXXXXXXXXXXXXXXXXXXXXXXXSRIPVSMPFRCEYRVRYRQPLASCTVSLPPSAPGL-------------------LRIDFDAPQRAVALKQTLALY-DGERCLGGGVIVGVGPSYWERGKELPEERVEW 442 V VG+SGGVDSSVAA+LL QQG++V GV+M+NWD+SDE G CP+ +DL+D Q V +QLGIP +F YW VF P LE +E G TPNPD+LCNREIKF +F NFA E L+ VATGHYA L+ L PQL VGVD KDQSYFLS VP AF LFPLG K +VR +A L TA K++S+G+CF+GKR G F+ +Y+ P G V D ++ + TVGQ A + G K+F+ GK G +++A GT HPAL+ ++ V + FNWIG P LQ + C YR RYRQ C VS+ A + LRID + PQRAV QTLALY D C GGG + VG ++ E G+ + E +W Sbjct: 30 VVVGMSGGVDSSVAALLLKQQGHKVTGVYMKNWDSSDEVGTQCCPQDQDLQDVQLVCEQLGIPLRTTNFVSSYWNTVFAPCLEGFEAGLTPNPDILCNREIKFKEFINFA-ETLQADVVATGHYALLKKAKADGLTNE-----YPQLYVGVDPHKDQSYFLSQVPGSAFSKVLFPLGSYRKKEVREIAKRHHLHTALKRDSVGLCFIGKRHFGPFISQYIAPKEGFYHDV-DRLLMPKGHKCFASCTVGQRASLSGMDAKYFIVGKRKVDGTIFIARGTRHPALFSNYCFVSAKHFNWIGTEPPNLQ--------------------------------ENGAAKSIACHYRARYRQDPGRCLVSVVSEAKAVCESSSFLEVPSETTRSEQYLRIDLEFPQRAVTPGQTLALYGDDGLCYGGGPVEIVGKTFHELGRSISPEASDW 436
BLAST of NO01G04800 vs. NCBI_GenBank
Match: OWZ01843.1 (TRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [Phytophthora megakarya]) HSP 1 Score: 330.5 bits (846), Expect = 8.100e-87 Identity = 192/454 (42.29%), Postives = 240/454 (52.86%), Query Frame = 0 Query: 20 LSGGVDSSVAAMLLLQQGYEVVGVHMQNWDTSDEEGMSACPETEDLKDAQEVSKQLGIPFYRADFSRPYWTNVFTPFLEDYERGWTPNPDVLCNREIKFSKFRNFAQEALRTPWVATGHYARLRYPCPPSLPPSSEAIGAPQLLVGVDDSKDQSYFLSHVPSLAFQHTLFPLGHLTKTQVRALATNSGLCTAQKKESMGICFVGKRRMGDFLPEYLKPLPGLLVSVTDGAVLGEQEGGLTLLTVGQGARIGGEATKWFVCGKDMEKGVVWVAPGTNHPALYCDWLLVKEEKFNWI-GRRPRELQRLVRXXXXXXXXXXXXXXXXXXXXXXXXXXXSRIPVSMPFRCEYRVRYRQPLASCTVSL------PPSAPGL------------------------LRIDFDAPQRAVALKQTLALY-DGERCLGGGVIVGVGPSYWERGKELPEERVEW 442 +SGGVDSSVAA+LL +QG+ + GV+M+NWD SDEEG SACP + D Q+V +QLGI + + YW VF P LE YE G TPNPD+LCNREIKF F +A++ + +VATGHYA LR +E G P L DD+KDQSYFLS V AF + LFPLG + KT+VR +AT+ GLCTA KK+S+GICF+GKR DF+ +Y++P TVGQGAR+ G + KWFV GK V VA GT +PAL+ D L +FNW+ G P+EL R RC YRVRYRQ L CT+SL SA L LR+DFD PQR V +Q L LY D C GGG I G +Y+E+GK L ++ +W Sbjct: 1 MSGGVDSSVAALLLKRQGFHITGVYMKNWDPSDEEGESACPVDSEYLDVQKVCEQLGIEAQMVNLVQSYWNQVFAPCLEGYEEGLTPNPDILCNREIKFKAFTEYAKQ-IGADYVATGHYAALR---------PAEDGGPPNLCAAEDDTKDQSYFLSSVDGKAFTNVLFPLGGMCKTEVRRIATSEGLCTATKKDSVGICFIGKRNFSDFIHQYIQP-----------------------YTVGQGARLQGMSAKWFVVGKHKSDHSVIVAEGTRNPALFSDALFASAAQFNWMAGDLPQELHDTGR-----------------------------------MRCFYRVRYRQDLDECTISLISNREARTSASKLHDWQPEPIADENDEVGKEREKTCYLRVDFDHPQRGVTPEQALVLYRDDGLCYGGGPIAAAGETYYEQGKPLAQDVHDW 386
BLAST of NO01G04800 vs. NCBI_GenBank
Match: CCI48128.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 326.2 bits (835), Expect = 1.500e-85 Identity = 186/442 (42.08%), Postives = 236/442 (53.39%), Query Frame = 0 Query: 20 LSGGVDSSVAAMLLLQQGYEVVGVHMQNWDTSDEEGMSACPETEDLKDAQEVSKQLGIPFYRADFSRPYWTNVFTPFLEDYERGWTPNPDVLCNREIKFSKFRNFAQEALRTPWVATGHYARLRYPCPPSLPPSSEAIGAPQLLVGVDDSKDQSYFLSHVPSLAFQHTLFPLGHLTKTQVRALATNSGLCTAQKKESMGICFVGKRRMGDFLPEYLKPLPGLLVSVTDGAVLGEQEGGLTLLTVGQGARIGGEATKWFVCGKDMEKGVVWVAPGTNHPALYCDWLLVKEEKFNWIGRRPRELQRLVRXXXXXXXXXXXXXXXXXXXXXXXXXXXSRIPVSMPFRCEYRVRYRQPLASCTVSLPPSAPGL-------------------LRIDFDAPQRAVALKQTLALY-DGERCLGGGVIVGVGPSYWERGKELPEERVEW 442 +SGGVDSSVAA+LL QQG++V GV+M+NWD+SDE G CP+ +DL+D Q V +QLGIP +F YW VF P LE +E G TPNPD+LCNREIKF +F NFA E L+ VATGHYA L+ L PQL VGVD KDQSYFLS VP AF LFPLG K +VR +A L TA K++S+G+CF+GKR G F+ +Y+ P G V D ++ + TVGQ A + G K+F+ GK G +++A GT HPAL+ ++ V + FNWIG P LQ + C YR RYRQ C VS+ A + LRID + PQRAV QTLALY D C GGG + VG ++ E G+ + E +W Sbjct: 1 MSGGVDSSVAALLLKQQGHKVTGVYMKNWDSSDEVGTQCCPQDQDLQDVQLVCEQLGIPLRTTNFVSSYWNTVFAPCLEGFEAGLTPNPDILCNREIKFKEFINFA-ETLQADVVATGHYALLKKAKADGLTNE-----YPQLYVGVDPHKDQSYFLSQVPGSAFSKVLFPLGSYRKKEVREIAKRHHLHTALKRDSVGLCFIGKRHFGPFISQYIAPKEGFYHDV-DRLLMPKGHKCFASCTVGQRASLSGMDAKYFIVGKRKVDGTIFIARGTRHPALFSNYCFVSAKHFNWIGTEPPNLQ--------------------------------ENGAAKSIACHYRARYRQDPGRCLVSVVSEAKAVCESSSFLEVPSETTRSEQYLRIDLEFPQRAVTPGQTLALYGDDGLCYGGGPVEIVGKTFHELGRSISPEASDW 403 The following BLAST results are available for this feature:
BLAST of NO01G04800 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G04800 ID=NO01G04800|Name=NO01G04800|organism=Nannochloropsis oceanica|type=gene|length=1718bpback to top protein sequence of NO01G04800.1 >NO01G04800.1-protein ID=NO01G04800.1-protein|Name=NO01G04800.1|organism=Nannochloropsis oceanica|type=polypeptide|length=444bpback to top Synonyms
Publications
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