NO01G04710, NO01G04710 (gene) Nannochloropsis oceanica

Overview
NameNO01G04710
Unique NameNO01G04710
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length5634
Alignment locationchr1:1243182..1248815 -

Link to JBrowse

Properties
Property NameValue
DescriptionRho gtpase-activating protein 25
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:1243182..1248815 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000062fatty-acyl-CoA binding
GO:0008289lipid binding
GO:0008289lipid binding
GO:0000062fatty-acyl-CoA binding
Vocabulary: INTERPRO
TermDefinition
IPR035984Acyl-CoA-binding_sf
IPR000582Acyl-CoA-binding_protein
IPR001849PH_domain
IPR002913START_lipid-bd_dom
Homology
BLAST of NO01G04710 vs. NCBI_GenBank
Match: KUG01258.1 (Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex [Phytophthora nicotianae])

HSP 1 Score: 150.6 bits (379), Expect = 4.500e-32
Identity = 107/403 (26.55%), Postives = 179/403 (44.42%), Query Frame = 0
Query:  135 KTGVLYKQRDVFKGWRARTFVLKDKLLTYYLHDDDPVPRSTLILDGCRVQPLRDGHTYTVKKEGTGESVLLYPFSITHPDSNQAYHLAATSQEETDEWIRTLKMAAAGPRRVSLRRKPSVDSRLWQQQQQLEEGEGGSRPSSSFG--LPLPEAGGFQPIGNAALIPPELGKKVSRAMQAVLENTEGGKQEGWEVVSTRSDVQV-LKRPGTVTSFRGEGRIAAHPVSVLLAVMDLSQRQAYDAHFGFGRRVKMYNAHTWLDYHHYRAVWPTSARDMYNIVHWQVLEGEGEGGTIVVVVFADEDR--HPEEAGCVRAECLLAGWVIRPINPATGVAPERQPXXXXXXXXXXXXXXXXXXDLPLESQVSFVLQTDLKGNLPHSVTNMVSEGQPLIIASLRKFLLEN 533
            K G LYK+  + + WR R F L+  +L YY  D D VP+  ++L GC ++  +D      KK        LY F I+HP +++ Y LAAT    T++WI+ L  A+                               +   +S    L +PE            IP E   ++   +   +   +    +GW+  + +  V+  ++R     +F+G G IA HP  VL  +++LS+R  YD      +RV ++N H W+D+  Y+AV+P +ARD  N+ HW+VL    +G  +VV  +A++D     +E   VRA  ++AG++++P    TGV                                +++ + DLK  +P  +   +   Q  ++  LRK L E+
Sbjct:   24 KAGHLYKKTGLGRSWRPRFFSLEGTVLYYYKRDGDSVPKGIVVLTGCHIRATKD------KK--------LYSFRISHPKTSKVYDLAATLPSRTEDWIQALTQASTMVXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLVDASITELLDVPEVA----------IPDEHRDRMEELLAEFVAQAQ-YDADGWKFQTEQRGVKAYVRRTSKTGTFKGVGFIAHHPHKVLHLILELSKRPKYDPQLLATQRVHVFNDHMWVDHLTYKAVFPAAARDFVNLTHWRVLR---DGSIVVVATYAEDDSFVKNQEPQIVRARAIMAGFLLKPNEDYTGV------------------------------NATYITKVDLKAGIPAGLQAKMFIKQAFVVDGLRKALDED 368          
BLAST of NO01G04710 vs. NCBI_GenBank
Match: ETK75067.1 (hypothetical protein L915_18247 [Phytophthora parasitica] >ETL28489.1 hypothetical protein L916_18154 [Phytophthora parasitica] >ETP04618.1 hypothetical protein F441_18628 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 150.2 bits (378), Expect = 5.900e-32
Identity = 107/403 (26.55%), Postives = 178/403 (44.17%), Query Frame = 0
Query:  135 KTGVLYKQRDVFKGWRARTFVLKDKLLTYYLHDDDPVPRSTLILDGCRVQPLRDGHTYTVKKEGTGESVLLYPFSITHPDSNQAYHLAATSQEETDEWIRTLKMAAAGPRRVSLRRKPSVDSRLWQQQQQLEEGEGGSRPSSSFG--LPLPEAGGFQPIGNAALIPPELGKKVSRAMQAVLENTEGGKQEGWEVVSTRSDVQV-LKRPGTVTSFRGEGRIAAHPVSVLLAVMDLSQRQAYDAHFGFGRRVKMYNAHTWLDYHHYRAVWPTSARDMYNIVHWQVLEGEGEGGTIVVVVFADEDR--HPEEAGCVRAECLLAGWVIRPINPATGVAPERQPXXXXXXXXXXXXXXXXXXDLPLESQVSFVLQTDLKGNLPHSVTNMVSEGQPLIIASLRKFLLEN 533
            K G LYK+  + + WR R F L+  +L YY  D D VP+  ++L GC ++  +D      KK        LY F I+HP +++ Y LAAT    T++WI+ L  A+                               +   +S    L +PE            IP E   ++   +   +        +GW+  + +  V+  ++R     +F+G G IA HP  VL  +++LS+R  YD      +RV ++N H W+D+  Y+AV+P +ARD  N+ HW+VL    +G  +VV  +A++D     +E   VRA  ++AG++++P    TGV                                +++ + DLK  +P  +   +   Q  ++  LRK L E+
Sbjct:   24 KAGHLYKKTGLGRSWRPRFFSLEGTVLYYYKRDGDSVPKGIVVLTGCHIRATKD------KK--------LYSFRISHPKTSKVYDLAATLPSRTEDWIQALTQASTMVXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLVDASITELLDVPEVA----------IPDEHRDRMEELLAEFVAQAR-DDADGWKFQTEQRGVKAYVRRTSKTGTFKGVGFIAHHPHKVLHLILELSKRPKYDPQLLATQRVHVFNDHMWVDHLIYKAVFPAAARDFVNLTHWRVLR---DGSIVVVATYAEDDSFVKNQEPQIVRARAIMAGFLLKPNEDYTGV------------------------------NATYITKVDLKAGIPAGLQAKMFIKQAFVVDGLRKALDED 368          
BLAST of NO01G04710 vs. NCBI_GenBank
Match: ETM34973.1 (hypothetical protein L914_18053 [Phytophthora parasitica])

HSP 1 Score: 149.1 bits (375), Expect = 1.300e-31
Identity = 107/403 (26.55%), Postives = 177/403 (43.92%), Query Frame = 0
Query:  135 KTGVLYKQRDVFKGWRARTFVLKDKLLTYYLHDDDPVPRSTLILDGCRVQPLRDGHTYTVKKEGTGESVLLYPFSITHPDSNQAYHLAATSQEETDEWIRTLKMAAAGPRRVSLRRKPSVDSRLWQQQQQLEEGEGGSRPSSSFG--LPLPEAGGFQPIGNAALIPPELGKKVSRAMQAVLENTEGGKQEGWEVVSTRSDVQV-LKRPGTVTSFRGEGRIAAHPVSVLLAVMDLSQRQAYDAHFGFGRRVKMYNAHTWLDYHHYRAVWPTSARDMYNIVHWQVLEGEGEGGTIVVVVFADEDR--HPEEAGCVRAECLLAGWVIRPINPATGVAPERQPXXXXXXXXXXXXXXXXXXDLPLESQVSFVLQTDLKGNLPHSVTNMVSEGQPLIIASLRKFLLEN 533
            K G LYK+  + + WR R F L+  +L YY  D D VP+  ++L GC ++  +D      KK        LY F I+HP +++ Y LAAT    T++WI+ L  A+                               +   +S    L +PE            IP E   ++   +   +        +GW+  + +  V+  ++R     +F+G G IA HP  VL  +++LS+R  YD      +RV ++N H W+D+  Y+AV+P +ARD  N+ HW+VL    +G  +VV  +A+ D     +E   VRA  ++AG++++P    TGV                                +++ + DLK  +P  +   +   Q  ++  LRK L E+
Sbjct:   24 KAGHLYKKTGLGRSWRPRFFSLEGTVLYYYKRDGDSVPKGIVVLTGCHIRATKD------KK--------LYSFRISHPKTSKVYDLAATLPSRTEDWIQALTQASTMVXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLVDASITELLDVPEVA----------IPDEHRDRMEELLAEFVAQAR-DDADGWKFQTEQRGVKAYVRRTSKTGTFKGVGFIAHHPHKVLHLILELSKRPKYDPQLLATQRVHVFNDHMWVDHLTYKAVFPAAARDFVNLTHWRVLR---DGSIVVVATYAEGDSFVKNQEPQIVRARAIMAGFLLKPNEDYTGV------------------------------NATYITKVDLKAGIPAGLQAKMFIKQAFVVDGLRKALDED 368          
BLAST of NO01G04710 vs. NCBI_GenBank
Match: ETP32775.1 (hypothetical protein F442_18588 [Phytophthora parasitica P10297])

HSP 1 Score: 149.1 bits (375), Expect = 1.300e-31
Identity = 107/403 (26.55%), Postives = 177/403 (43.92%), Query Frame = 0
Query:  135 KTGVLYKQRDVFKGWRARTFVLKDKLLTYYLHDDDPVPRSTLILDGCRVQPLRDGHTYTVKKEGTGESVLLYPFSITHPDSNQAYHLAATSQEETDEWIRTLKMAAAGPRRVSLRRKPSVDSRLWQQQQQLEEGEGGSRPSSSFG--LPLPEAGGFQPIGNAALIPPELGKKVSRAMQAVLENTEGGKQEGWEVVSTRSDVQV-LKRPGTVTSFRGEGRIAAHPVSVLLAVMDLSQRQAYDAHFGFGRRVKMYNAHTWLDYHHYRAVWPTSARDMYNIVHWQVLEGEGEGGTIVVVVFADEDR--HPEEAGCVRAECLLAGWVIRPINPATGVAPERQPXXXXXXXXXXXXXXXXXXDLPLESQVSFVLQTDLKGNLPHSVTNMVSEGQPLIIASLRKFLLEN 533
            K G LYK+  + + WR R F L+  +L YY  D D VP+  ++L GC ++  +D      KK        LY F I+HP +++ Y LAAT    T++WI+ L  A+                               +   +S    L +PE            IP E   ++   +   +        +GW+  + +  V+  ++R     +F+G G IA HP  VL  +++LS+R  YD      +RV ++N H W+D+  Y+AV+P +ARD  N+ HW+VL    +G  +VV  +A+ D     +E   VRA  ++AG++++P    TGV                                +++ + DLK  +P  +   +   Q  ++  LRK L E+
Sbjct:   24 KAGHLYKKTGLGRSWRPRFFSLEGTVLYYYKRDGDSVPKGIVVLTGCHIRATKD------KK--------LYSFRISHPKTSKVYDLAATLPSRTEDWIQALTQASTMVXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLVDASITELLDVPEVA----------IPDEHRDRMEELLAEFVAQAR-DDADGWKFQTEQRGVKAYVRRTSKTGTFKGVGFIAHHPHKVLHLILELSKRPKYDPQLLATQRVHVFNDHMWVDHLTYKAVFPAAARDFVNLTHWRVLR---DGSIVVVATYAEGDSFVKNQEPQIVRARAIMAGFLLKPNEDYTGV------------------------------NATYITKVDLKAGIPAGLQAKMFIKQAFVVDGLRKALDED 368          
BLAST of NO01G04710 vs. NCBI_GenBank
Match: GAX94353.1 (Hypothetical protein PINS_002226 [Pythium insidiosum])

HSP 1 Score: 145.2 bits (365), Expect = 1.900e-30
Identity = 109/404 (26.98%), Postives = 184/404 (45.54%), Query Frame = 0
Query:  135 KTGVLYKQRDVF-KGWRARTFVLKDKLLTYYLHDDDPVPRSTLILDGCRVQPLRDGHTYTVKKEGTGESVLLYPFSITHPDSNQAYHLAATSQEETDEWIRTLKMAA-----AGPRRVSLRRKPSVDSRLWQQQQQLEEGEGGSRPSSSFGLPLPEAGGFQPIGNAALIPPELGKKVSRAMQAVLENTEGGKQEGWEVVSTRSDVQVLKRPGT-VTSFRGEGRIAAHPVSVLLAVMDLSQRQAYDAHFGFGRRVKMYNAHTWLDYHHYRAVWPTSARDMYNIVHWQVLEGEGEGGTIVVVVFADEDRHPEEAGCVRAECLLAGWVIRPINPATGVAPERQPXXXXXXXXXXXXXXXXXXDLPLESQVSFVLQTDLKGNLPHSVTNMVSEGQPLIIASLRKFLLE 532
            K G LY++     + W+ R F L+  LL Y+  + D VP+ T++L GC+++  RD      KK         Y F I+HP +++ Y LAAT Q   ++W+  L+  A      GP   S R + SVD R  Q + +         PS S    + ++       + A +P E   ++   M   +        EGW++ S + D +V  R  + + S +G G +  HP  ++  ++DL++RQ+YD      RR  +YN HT++D+  Y+ V+P + RD  ++ HW+VL+   +G         D D    E   VRA  ++ G++I P N  TG                              + V ++++ D++G +P ++   +   Q  +I  LR  L E
Sbjct:   27 KAGHLYQKTGALTRKWKPRFFSLEGSLLHYFKREGDSVPKGTILLTGCQIKVTRD------KK--------YYSFRISHPKTSKTYDLAATLQSRMEDWVDALRDGAQAANSQGPNSHS-RSESSVDLRASQIEPR--------TPSQSSSFVISDSDLEAIAADNAELPEEYRDELEALMCEFMMQAR-DDAEGWKLQSEQRDCKVFVRAASRLGSCKGVGYVNYHPHLIMKLLLDLARRQSYDPQLLASRRAHVYNDHTFIDHLIYKPVFPAAGRDFVHVTHWRVLK---DG--------VDPDHRDVEPEIVRARTIMGGFLITPNNDYTG------------------------------ADVRYIIKADIRGGIPLALQTKLFTKQAFVIXGLRLALDE 365          
BLAST of NO01G04710 vs. NCBI_GenBank
Match: XP_004346644.1 (hypothetical protein CAOG_04959 [Capsaspora owczarzaki ATCC 30864])

HSP 1 Score: 104.8 bits (260), Expect = 2.800e-18
Identity = 65/226 (28.76%), Postives = 106/226 (46.90%), Query Frame = 0
Query:  309 MQAVLENTEGGKQEGWEVVSTRSDVQVLKR----PGTVTSFRGEGRIAAHPVSVLLAVMDLSQRQAYDAHFGFGRRV-KMYNAHTWLDYHHYRAVWPTSARDMYNIVHWQVLEGEGEGGTIVVVVFADEDRHPEEAGCVRAECLLAGWVIRPINPATGVAPERQPXXXXXXXXXXXXXXXXXXDLPLESQVSFVLQTDLKGNLPHSVTNMVSEGQPLIIASLRKFL 530
            ++ +LE  +GG+ EGW +   + ++ V KR    P      +G GR+ A P +VL   +D+++R  YD  F  G  V ++ + +  + Y  Y A+WPT+ARD   ++  ++L    +G  ++          PE  G VRA+  + GWV RPI                                P+ S V+++ Q DLKGN+P  + + V+  QPL I  LR  +
Sbjct:  395 LKDILEVADGGENEGWRLEFNKKNIAVYKRAVDGPAACVCVKGTGRVEAPPRAVLDLTLDVNRRNLYDVMFKQGHIVDELQDIYCKVVYLEYEAMWPTAARDFCVVIFIKILT---DGRCVLAARSVTHPNCPERKGFVRADAQVTGWVFRPI-----------------------------PGEPMASMVTYITQADLKGNIPAMLVSKVTTDQPLCIDLLRNVI 588          
BLAST of NO01G04710 vs. NCBI_GenBank
Match: KJE94292.1 (hypothetical protein CAOG_004959 [Capsaspora owczarzaki ATCC 30864])

HSP 1 Score: 104.8 bits (260), Expect = 2.800e-18
Identity = 65/226 (28.76%), Postives = 106/226 (46.90%), Query Frame = 0
Query:  309 MQAVLENTEGGKQEGWEVVSTRSDVQVLKR----PGTVTSFRGEGRIAAHPVSVLLAVMDLSQRQAYDAHFGFGRRV-KMYNAHTWLDYHHYRAVWPTSARDMYNIVHWQVLEGEGEGGTIVVVVFADEDRHPEEAGCVRAECLLAGWVIRPINPATGVAPERQPXXXXXXXXXXXXXXXXXXDLPLESQVSFVLQTDLKGNLPHSVTNMVSEGQPLIIASLRKFL 530
            ++ +LE  +GG+ EGW +   + ++ V KR    P      +G GR+ A P +VL   +D+++R  YD  F  G  V ++ + +  + Y  Y A+WPT+ARD   ++  ++L    +G  ++          PE  G VRA+  + GWV RPI                                P+ S V+++ Q DLKGN+P  + + V+  QPL I  LR  +
Sbjct:  369 LKDILEVADGGENEGWRLEFNKKNIAVYKRAVDGPAACVCVKGTGRVEAPPRAVLDLTLDVNRRNLYDVMFKQGHIVDELQDIYCKVVYLEYEAMWPTAARDFCVVIFIKILT---DGRCVLAARSVTHPNCPERKGFVRADAQVTGWVFRPI-----------------------------PGEPMASMVTYITQADLKGNIPAMLVSKVTTDQPLCIDLLRNVI 562          
BLAST of NO01G04710 vs. NCBI_GenBank
Match: XP_004353739.1 (2oxo acid dehydrogenase acyltransferase catalytic subunit [Acanthamoeba castellanii str. Neff] >ELR24211.1 2oxo acid dehydrogenase acyltransferase catalytic subunit [Acanthamoeba castellanii str. Neff])

HSP 1 Score: 102.8 bits (255), Expect = 1.100e-17
Identity = 71/225 (31.56%), Postives = 109/225 (48.44%), Query Frame = 0
Query: 1423 WGQEGMKNR-----VNVRFTVEIKKLKRYIDAQQRETCGVGITVLHVAMRALGLALREVPALNGHRVFGEFKPSRTTDVSCELRLRDGR-FALLKVGEVDVKSLADISRTLSLKSQALSHGRDVFYNRRLLISRWCPSFLLPSLEACFTVLGAGLGLSLPWLGVRAFPQGGCVVLTSPAVTASRGFACEADFEVTPAATPSTAFL-APLVLTIGAISAVPKAVDG 1641
            W   GM  R     ++ + +++  K+++YID ++R+T    IT+ HV  +ALGLALR  P LNG  VF  F P +T D+S    +  G+  A +KV  +D K +  ++  L   SQ L  G D  + + +   +  P++L+  +          LGLS+P LGV   P G C++ +   +     FA            P T F   PL++ IGAI    K  DG
Sbjct:   41 WASAGMPIRRKARSIHAKISLDATKVQKYID-EKRKTTRQHITITHVVGKALGLALRNAPGLNGRIVFDRFLPFKTIDISFLAMVEGGKNLAKVKVSNIDKKGVDQVATELDAGSQRLRKGTDENFKKSMGPLKLLPTWLIRLVVNTAAYAAGALGLSIPALGVEPHPFGSCIITSVGMLGVDEAFA------------PFTPFARVPLLVLIGAIHEGVKVEDG 252          
BLAST of NO01G04710 vs. NCBI_GenBank
Match: EYF02091.1 (2-oxo acid dehydrogenase acyltransferase catalytic domain protein [Chondromyces apiculatus DSM 436])

HSP 1 Score: 99.4 bits (246), Expect = 1.200e-16
Identity = 70/223 (31.39%), Postives = 105/223 (47.09%), Query Frame = 0
Query: 1420 VTEWGQEGMKNRVNVRFTVEIKKLKRYIDAQQRETCGVGITVLHVAMRALGLALREVPALNGHRVFGEFKPSRTTDVSCELRLRD-GRFALLKVGEVDVKSLADISRTLSLKSQALSHGRDVFYNRRLLISRWCPSFLLPSLEACFTVLGAGLGLSLPWLGVRAFPQGGCVVLTSPAVTASRGFACEADFEVTPAATPSTAFL-APLVLTIGAISAVPKAVDG 1641
            +  W      N +  + T++  +   YI+  QR T G  +T+ H+  +A+G ALR+   LNG    G + P  T DVS  + L + G  A  KV  VD KS+ DI+R L   +  L  G D  +N+     R  P++LL  +     +L A  G+S+P LG+ AFP G C++ +        G+A            P T F   P  + +GA+   P  VDG
Sbjct:   16 IASWSSPSEGN-IYGKLTLDATEAVAYIE-HQRRTTGEKVTITHLVGKAVGEALRQEKTLNGFIRLGAYVPHETVDVSFLVALEEGGNLAKAKVANVDQKSVVDIARELRELAARLHRGHDQEFNKTQSPIRMLPTWLLKPMLYTTGLLTASFGVSVPSLGLEAFPFGACIITSVGMFGLDEGYA------------PPTPFARVPAYVLVGALRDSPAVVDG 224          
BLAST of NO01G04710 vs. NCBI_GenBank
Match: WP_081865512.1 (hypothetical protein [Chondromyces apiculatus])

HSP 1 Score: 99.4 bits (246), Expect = 1.200e-16
Identity = 70/223 (31.39%), Postives = 105/223 (47.09%), Query Frame = 0
Query: 1420 VTEWGQEGMKNRVNVRFTVEIKKLKRYIDAQQRETCGVGITVLHVAMRALGLALREVPALNGHRVFGEFKPSRTTDVSCELRLRD-GRFALLKVGEVDVKSLADISRTLSLKSQALSHGRDVFYNRRLLISRWCPSFLLPSLEACFTVLGAGLGLSLPWLGVRAFPQGGCVVLTSPAVTASRGFACEADFEVTPAATPSTAFL-APLVLTIGAISAVPKAVDG 1641
            +  W      N +  + T++  +   YI+  QR T G  +T+ H+  +A+G ALR+   LNG    G + P  T DVS  + L + G  A  KV  VD KS+ DI+R L   +  L  G D  +N+     R  P++LL  +     +L A  G+S+P LG+ AFP G C++ +        G+A            P T F   P  + +GA+   P  VDG
Sbjct:   59 IASWSSPSEGN-IYGKLTLDATEAVAYIE-HQRRTTGEKVTITHLVGKAVGEALRQEKTLNGFIRLGAYVPHETVDVSFLVALEEGGNLAKAKVANVDQKSVVDIARELRELAARLHRGHDQEFNKTQSPIRMLPTWLLKPMLYTTGLLTASFGVSVPSLGLEAFPFGACIITSVGMFGLDEGYA------------PPTPFARVPAYVLVGALRDSPAVVDG 267          
The following BLAST results are available for this feature:
BLAST of NO01G04710 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
KUG01258.14.500e-3226.55Dihydrolipoyllysine-residue acetyltransferase comp... [more]
ETK75067.15.900e-3226.55hypothetical protein L915_18247 [Phytophthora para... [more]
ETM34973.11.300e-3126.55hypothetical protein L914_18053 [Phytophthora para... [more]
ETP32775.11.300e-3126.55hypothetical protein F442_18588 [Phytophthora para... [more]
GAX94353.11.900e-3026.98Hypothetical protein PINS_002226 [Pythium insidios... [more]
XP_004346644.12.800e-1828.76hypothetical protein CAOG_04959 [Capsaspora owczar... [more]
KJE94292.12.800e-1828.76hypothetical protein CAOG_004959 [Capsaspora owcza... [more]
XP_004353739.11.100e-1731.562oxo acid dehydrogenase acyltransferase catalytic ... [more]
EYF02091.11.200e-1631.392-oxo acid dehydrogenase acyltransferase catalytic... [more]
WP_081865512.11.200e-1631.39hypothetical protein [Chondromyces apiculatus][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL005nonsL005Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR047ncniR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR091ngnoR091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK007797NSK007797Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G04710.1NO01G04710.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|577475gene_494Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100042g16gene1229Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G04710.1NO01G04710.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G04710 ID=NO01G04710|Name=NO01G04710|organism=Nannochloropsis oceanica|type=gene|length=5634bp
ATGTCAGACTCCGACCGTTCTGCCCGGCTCCTAGCCGTCTCTACCAACTT
TCAGATGGCTGTGCGCCGGTCGCAGGAGTTGGAACGAAGTGgtacgtttt
tatgatggatgggcgcgatgaaagggaacatgggcgtggtggaagccctt
ggggggaagacaggaggaagcgacacgacggatagatcgatatctgggac
cagatctggtcacttccgcgtacagcctcctcatttgcacctgcatacat
gagacgggtacacgtatgctaccccccttgacatcgtttctgattgcttt
cacccgccgtgctcaacgagacatacattcgaactcacctccctctctct
ccctttccccccttcaatcacaattttaaacagGCCAACTAAGCAGCAAC
CGTAGTGTGCACCTGTACGGTATCCTTATGCAGGCCACAGCCGGCGACTG
CCGCGCTAGCAAACCCCCGCCTAGCTCCAGTGCCGGCCAAAGCGACGAGG
GTCTAAAATGGATGGCGTGGAAAAAGAAGCAAGGCATGTCGAGAGAGCAG
GCCATGGTTGCGTACATAGACCAGATGGACTTAATTGACGAAGAGCTCAT
GACGGGAGGCGCAGCCTTGATGGATAGCACAGGGGGAAACGCGGCGTTAT
ACAGCAGCGATGGTCTGTATTCCTCCCAAGAGCCAGTGACAGCCAAGACG
GGAGTGCTTTACAAACAACGAGATGTGTTCAAAGGGTGGAGGGCGAGGAC
CTTCGTACTGAAGGATAAGTTGTTGACGTATTATTTACACGATGATGACC
CTGTGCCACGCAGTACTCTTATCCTGGATGGTTGCCGCGTGCAGCCGCTG
AGGGACGGACATACGTACACTGTCAAGAAGGAGGGCACCGGGGAGAGCGT
GCTACTATATCCATTTTCAATCACCCACCCTGATAGCAACCAGGCGTACC
ACCTCGCAGCGACCAGTCAGGAGGAAACGGACGAATGGATCCGAACTTTA
AAAATGGCGGCAGCTGGTCCCCGCCGTGTCTCTCTGCGGAGAAAGCCCTC
AGTGGACTCCCGCCTATGGCAACAGCAGCAGCAACTGGAGGAAGGAGAAG
GAGGGAGCAGACCGTCGTCATCGTTTGGTTTGCCCTTGCCGGAGGCAGGG
GGGTTTCAGCCCATAGGGAATGCGGCATTGATCCCTCCAGAATTAGGTAA
AAAGGTTTCACGAGCCATGCAAGCAGTGCTTGAAAATACCGAGGGCGGGA
AGCAGGAAGGCTGGGAGGTGGTCTCCACGCGCTCCGACGTCCAGGTGCTA
AAACGACCGGGGACGGTGACGTCTTTTAGAGGGGAAGGGAGGATTGCGGC
CCACCCTGTGTCGGTATTGCTTGCTGTGATGGACTTGTCGCAGAGGCAGG
CGTACGACGCTCATTTCGGTTTTGGAAGGAGGGTGAAAATGTACAATGCG
CATACCTGGTTAGATTACCACCACTACCGTGCTGTGTGGCCGACGTCGGC
GCGCGATATGTACAATATAGTCCACTGGCAGGTGTTGGAGGGAGAGGGGG
AGGGCGGGACCATTGTCGTGGTGGTGTTCGCGGATGAGGACCGGCACCCT
GAGGAGGCGGGGTGTGTCCGGGCAGAGTGCCTCCTGGCAGGATGGGTGAT
TCGGCCGATTAACCCTGCTACAGGTGTTGCACCGGAACGACAGCCTTCTT
CCCCTTCCTCCTCCTCGTCCTCCTCGTCCTCCTCGTCCTCCACTGACCGA
GATCTTCCCCTCGAGTCCCAAGTGAGTTTCGTCCTTCAAACCGACCTCAA
GGGCAATCTCCCCCACTCCGTCACCAACATGGTTTCAGAAGGTCAGCCTC
TGATTATCGCTTCCTTGCGAAAATTTCTCTTAGAGAACCAACGGACGTCC
TCCGCCTCGTCCTCGTCATCCTTCGCTTCATCATCTCGACGACGACCAAG
CCACTTGAGCAGTATCGGTACCGGCGCCGCTGGCGCAGCAGCAGCAGCAG
CAGGAAGCGGAGTACATGGTGGTGGCTTGGGGTCAAGCGGGGGTTTAGGT
GGAAAGGGTGTGATTGATTGTTATTCCTTCAATGTGCTTTGTTACAGCAA
CCAGCAGGTGGAGCAAGCGATGGATCATCTCAATAGAAGGTTGTTGGCCA
TGGATGCCACGGCGAGCAGCAGCAGCAGCAGCAGCAGCAGCATCAACGGC
AGCAATAGCAGCAGCAATAAGAGCATTGGTGCGAGATCTCTCATGCCTGC
CTCCCCTGTGCATCTCCCCAGGGGGCGGTCGCTGATCAAGGGAGGGAGTG
ACGGAGGGAGGGGAGGAGGAGGGGGGTCATTGACTCCGGCCCGGAAGGCG
GCTCATCAGCGATCCTTGACGATGAAAGAGATTCAAAGCAGCTTAGCGCC
ACATATTATTGCGCAGGTGGAAGATGCAGTGTATGCAGCCCTGGAGAAAG
AGGCTTCATTTCCTTTTGGGAAGGAAGGGAAGAGGAGGCGGGGTGGGGGG
GATGGAGGAGTAGGAGTAGGAGAGGGAGAAGGAGGTTTGAGTAATGGCGG
TGGTACGCCAGTGGATGGTTGGGAGTTGTTTGATGAGCGGGAAGTGGAGG
GCAGCGAGAGTAGCAGCAACAGTGGCAGCAGCAGTAGTAAGGATCGATCG
TATTTGAACGAAAAAGACGCCACAGACGTCAGTGTCTTGCAGGTGTGCTC
GGAAGGGTTGATTAGACATCCGCCGGCCGCTGTTCTCAAAGCCTTGACTA
CTTTGGATTTGGTCAATATCTGGAGTAGCGCAGCTGAATTTTCTACACAC
GACGTTCTGTACAACGTGCATACATGGGTCACGTACCAGCGGCTCAAGGC
CATGTTTCCCATGCCCACGAGAGATGTATGCCAATTGGTCCACTGGAGGG
TGGTGGAGGAACAGGAAGGGCGTATAGTTGTGGTGGCTATGGACGACCCG
AGTCACCCGGAGGAGGAGGGGTATATCAGGGCGCATCAGCAGGAGCAGTG
GATTTTGGATTCAGTAGGGGGCGGGACGGCTACGCGGGTCTTCTGCTTGT
TCTCGCTTGACATCCAGGGGATTATGACCAAGGCCGTGAGGAAGGAGTTG
ACCGATAAGCAGGCGAATGTGATCCCATCAGTGAGGAAATTCTTGGATGA
GTATCTGAAGGTGGGAGGCGGTGGAGGGGCCGGAGAAGGGGGGGGGGGAG
GGGAAGAACTGGAGGGAGGCCCTCTGTTGAGGTCTGTGCAGATTTCCAAC
GCGGCGCTGCAGCCGTTAATGCTTGCCTGGAATAGGTGGAGCCCAAGCAT
GATACCCGACCGAATGCACATCTACCCAACGGCAGACGAGGTGCAAGCAG
CTGTCGCGGCGCGGGATGGCCGCACGCCTTCCTCTTGCTCCCGCAGTCAC
CGTGGTGAGAATTGTGGGGGAGAAGGAGGAATTGGTACCCTTACCCCCCA
CATGGGAACCGCAAGAAATACCGCCCTCGATCTGAGCAGGCCAGGTTTCG
GTCGGCCCAGCTCTGCCCCAACCATCCCGCCCCCCCAGCAAAAAAAGGCT
TTGCCTATGGCGGCCACGCCCCGATATACCCTTGCACCCTCCCCTCAGCC
TTTCCCCCATTCATCCTCCTTCGTCCCCGGTCCGCTGCACCTGCAGCAGC
AGCAGCAGCAGCAGCAGCCAATGCAGCATATCGCTGGACCTCATTCATCC
GGCTCTCGCTCTGCTACTTCCTCCCCCAAACCTCAGCAGCATCAGCGCCC
GCCTCGGCATCGTTGGGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAG
GAGGTGGGTCTACGCTGCGATATCAGCAAGTTGGCAGCAGGGAAGGGGGA
CAGGGAGGAGGAAATGAAGGGGAGGGAGAGGAGGAGGGGGAGGAGTACGA
CGAGGAGGAAGAGCTACGTGGTGTGACCCCAAGTGTGCCGTCCTCCCCTG
CTGGATCCATGCGTCGGTTCCCGTTAGAGTCAGCGGGAGGGACGGAGAGG
AGTACTTTTACAGCCAGCCTGAATTATACCCCTCCTCGCTCCAGCCCTCA
TCCAGGGCGGATCTCCACTATAAGCAGTAAAGCAGCAGCCTCTCCCTCCA
TCATCTTTCGAGGAGCCACACCAGCTGCTCTGCCAGCCACGGCCGAGCGT
CCTTCTCCGGCGCATACCGCAGCAGCAGCAGCGCCTGCAGCTGCTGCATC
ACCGTCATCAGCAGCAGCACTGGCGAGCAACAATCCTTCACCCCTTTCTA
CTAGGTTCGCCTGGGGTGGCTCTACCCTACAATTTGCTATTTTTTTGCTG
CCCGTCGTTCTGTATTACCTGGCCAGCATCAGTAGCAGCACTTCTTCCTT
TATCAGCTACTTCCTCCCGTTCTTGCCGGCCCCCCTCATCACTACTACAA
CCATTAACATCAACAGTAGCAGCAGTATGCACCAGTTTCGTGGGTTATTG
TTTGTGTTGGGCGTGTTGGTGGCTTTGCGGTATCTCGTTGCTGCACAAGC
ACAGGGGAGTAGTCAAGTGGGAGGGGGGGAGGGTGTGCCTGCTCGACGAG
TAACAGAGTGGGGGCAGGAAGGGATGAAAAATCGGGTAAATGTGCGATTT
ACGGTGGAGATTAAGAAGTTGAAAAGATATATCGATGCGCAACAAAGAGA
GACGTGTGGAGTGGGGATCACTGTCTTGCATGTCGCAATGCGAGCCTTGG
GGCTGGCGCTGCGAGAGGTGCCTGCATTGAATGGTCATCGGGTGTTTGGG
GAATTCAAGCCTTCACGCACGACTGATGTGTCTTGTGAGCTAAGGTTGAG
AGATGGCCGTTTTGCTCTGTTAAAGGTGGGGGAGGTGGATGTGAAATCCC
TTGCAGACATCTCGAGGACGCTGTCGTTGAAATCACAGGCGTTGAGCCAT
GGTCGTGATGTGTTTTATAACCGGCGTTTGCTCATCTCACGGTGGTGTCC
CTCATTCCTCCTTCCTTCTCTTGAAGCTTGTTTTACTGTCTTGGGGGCAG
GGTTAGGATTGAGTCTGCCGTGGTTGGGCGTACGGGCCTTCCCACAGGGA
GGATGTGTGGTTCTCACCTCTCCTGCTGTTACCGCTAGTAGGGGCTTCGC
TTGCGAGGCTGATTTTGAAGTAACTCCTGCAGCGACGCCGAGCACCGCGT
TCCTCGCTCCTCTGGTTTTGACCATCGGAGCGATCAGTGCTGTTCCCAAG
GCAGTGGACGGGCCAAGGGGAGGGCAGCAGCGGCAGCAGCAGGAAAGGGA
GGTGATTTTGTCGCCGGTGCTGAATGTGTCGATTCAGGCGCAGCTGCAGG
GAGGGGCGTCGTCGTTGCAGCATGTACGGAGACTGACAGAGCTGGTTCAC
AAATATATGAATGACCCGAGGTCATGCGAGGAGGACGCACTCAAGTCTGC
TACGGCTGCTGTCACTGCGCCAGCAGCCGTATCTGTCGGACACGGGGCAA
GGGCAAAAGGAGGAGGAGAGGGAGGAGAAGGAGAAGGTAGAGGGAAGCAA
ATGTAATAGCAGTATTGTATGTTTTTTTTTTTGCATAATTAGATAAGGGG
GATGGAAGAGACAGGAGATAAGACCAAATGTTAGGAAGAAAAGCAATTTC
AAATGGTTATGCACATGGCGACGTCAATAAGAGG
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protein sequence of NO01G04710.1

>NO01G04710.1-protein ID=NO01G04710.1-protein|Name=NO01G04710.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1738bp
MSDSDRSARLLAVSTNFQMAVRRSQELERSGQLSSNRSVHLYGILMQATA
GDCRASKPPPSSSAGQSDEGLKWMAWKKKQGMSREQAMVAYIDQMDLIDE
ELMTGGAALMDSTGGNAALYSSDGLYSSQEPVTAKTGVLYKQRDVFKGWR
ARTFVLKDKLLTYYLHDDDPVPRSTLILDGCRVQPLRDGHTYTVKKEGTG
ESVLLYPFSITHPDSNQAYHLAATSQEETDEWIRTLKMAAAGPRRVSLRR
KPSVDSRLWQQQQQLEEGEGGSRPSSSFGLPLPEAGGFQPIGNAALIPPE
LGKKVSRAMQAVLENTEGGKQEGWEVVSTRSDVQVLKRPGTVTSFRGEGR
IAAHPVSVLLAVMDLSQRQAYDAHFGFGRRVKMYNAHTWLDYHHYRAVWP
TSARDMYNIVHWQVLEGEGEGGTIVVVVFADEDRHPEEAGCVRAECLLAG
WVIRPINPATGVAPERQPSSPSSSSSSSSSSSSTDRDLPLESQVSFVLQT
DLKGNLPHSVTNMVSEGQPLIIASLRKFLLENQRTSSASSSSSFASSSRR
RPSHLSSIGTGAAGAAAAAAGSGVHGGGLGSSGGLGGKGVIDCYSFNVLC
YSNQQVEQAMDHLNRRLLAMDATASSSSSSSSSINGSNSSSNKSIGARSL
MPASPVHLPRGRSLIKGGSDGGRGGGGGSLTPARKAAHQRSLTMKEIQSS
LAPHIIAQVEDAVYAALEKEASFPFGKEGKRRRGGGDGGVGVGEGEGGLS
NGGGTPVDGWELFDEREVEGSESSSNSGSSSSKDRSYLNEKDATDVSVLQ
VCSEGLIRHPPAAVLKALTTLDLVNIWSSAAEFSTHDVLYNVHTWVTYQR
LKAMFPMPTRDVCQLVHWRVVEEQEGRIVVVAMDDPSHPEEEGYIRAHQQ
EQWILDSVGGGTATRVFCLFSLDIQGIMTKAVRKELTDKQANVIPSVRKF
LDEYLKVGGGGGAGEGGGGGEELEGGPLLRSVQISNAALQPLMLAWNRWS
PSMIPDRMHIYPTADEVQAAVAARDGRTPSSCSRSHRGENCGGEGGIGTL
TPHMGTARNTALDLSRPGFGRPSSAPTIPPPQQKKALPMAATPRYTLAPS
PQPFPHSSSFVPGPLHLQQQQQQQQPMQHIAGPHSSGSRSATSSPKPQQH
QRPPRHRWGGGGGGGGGGGGGGSTLRYQQVGSREGGQGGGNEGEGEEEGE
EYDEEEELRGVTPSVPSSPAGSMRRFPLESAGGTERSTFTASLNYTPPRS
SPHPGRISTISSKAAASPSIIFRGATPAALPATAERPSPAHTAAAAAPAA
AASPSSAAALASNNPSPLSTRFAWGGSTLQFAIFLLPVVLYYLASISSST
SSFISYFLPFLPAPLITTTTININSSSSMHQFRGLLFVLGVLVALRYLVA
AQAQGSSQVGGGEGVPARRVTEWGQEGMKNRVNVRFTVEIKKLKRYIDAQ
QRETCGVGITVLHVAMRALGLALREVPALNGHRVFGEFKPSRTTDVSCEL
RLRDGRFALLKVGEVDVKSLADISRTLSLKSQALSHGRDVFYNRRLLISR
WCPSFLLPSLEACFTVLGAGLGLSLPWLGVRAFPQGGCVVLTSPAVTASR
GFACEADFEVTPAATPSTAFLAPLVLTIGAISAVPKAVDGPRGGQQRQQQ
EREVILSPVLNVSIQAQLQGGASSLQHVRRLTELVHKYMNDPRSCEEDAL
KSATAAVTAPAAVSVGHGARAKGGGEGGEGEGRGKQM*
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Synonyms
Publications