Naga_100042g16, gene1229 (gene) Nannochloropsis gaditana

Overview
NameNaga_100042g16
Unique Namegene1229
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:212151..217676 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100042g16
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:212151..217676 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0008289lipid binding
GO:0016740transferase activity
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL091ngnoL091Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO01G04710NO01G04710Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna1275rna1275-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna1275rna1275Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna1275

>rna1275-protein ID=rna1275-protein|Name=rna1275|organism=Nannochloropsis gaditana|type=polypeptide|length=1654bp
MTDSDRSARLSAVSSNFQLAVLRAQELERGGQLSSNRSVALYGILMQATA
GDCRASKPPPSSNASQGDERLKWMAWKKKHGMTREQAMVAYIDQMDLIEE
ELATGGAVLMDSSGGNAALYSSDGLSSSQETLVRTGVLYKQRDIFKGWRP
RFFVLQGKVLKYYLQADDPTARSTLILDGCRVQPFQDGQEPTAKQEGTGR
SIPLFPFAITHPDSNQAYHLAAASQGEMEEWVQALKMAAAGPRRVSLRRK
PSVETRLWQQQQQQRGSLHSSSEHGLDPEGSGAGDGTGGGREGIEGGEGG
GPSLVSARRRAAGADASAPVGNLSLIPPELREKVQEGMRALLANTGPGEE
EGWEEVGTRSGVRVLRQPGPVTSFRGEGRIPVHPVTVLLTIMDLSLRQAY
DAHFGFGRRMKIYNAHTWLDYHHYQAVWPTSARDMYNVVHWQVLEDDGTI
VVVAVGDEDRHPEEAGCVRAECLLAGWVIRPVTSADPGTLRPSSEEGAGI
YTPCLPLPRESHVSFLLQTDLKGNLPHSVSNMVSEGQPLIIASLRKFLAE
QQPSSTLSASLLSRRESGNVGVHGGGLGASGGVPKGATRPDNAFHLPIYS
NQQVAPAMDNLNRRLLALDAMSSTSTQSQTRASLALARGSAPFPSAGRAL
GRAGGKSLRNVTTPPRKATHQRPLTMKEVQSSLAPHIAAQVEDAVCAALE
KEASFPFVDGRRRSRSMGAALGNGEGCGHDPGEDGNKVAGGTGNGVGGEG
WEVFDERNAEGGAGENAKDWSYLNETDATDVSVLQVCSEGVIRHPPAAVL
KALTTLDIVNIWCSAAEFSTHDVLYNVHTWVTYQRLKAMFPMPTRDLCQL
VHWRVVEDVVGRIVVVAVDDPSHPEEEGYIRAHQQEQWVLDAIEGGRATR
MFCLFTLDIQGIMTKAVRKELTDKQASVIPSIRKFLDEYLRASGGGEKQG
GNSGRARGGERARSGGAEDGWSDLGRVEISNAALEPLVLTWNRWSPTLIP
DRMHIFPTAAEEKITAAARGGRPPSSYGPSASVGKSYVPVGGKAAASASA
RPALMRANSAPPVPPLQGLDKPRYTLAPSPEPFHSHAMTPLEQQSIVHSG
VPATLARSTYTALSGQAHARPPRHRGNAVGHVASSKLRRESSVQGQGVTG
TPTSRMHAERKEGEEEEDEEELRGVAPSVPSSPASTRQPPTPYRDSAFGV
GERHGNSTGGYITPCASPKSGRVSSSLARRMNGSPSIIFRGTTPTTLVDT
AERPAPARSGGSSQVDGKFSQVPPLQSSREWSLVGMSPTWQIALLLLPVV
CYHLVNSTAFLPLLGPLWGLGAWEALAEGIKPYRGLGFVAGVVLVVRYLM
SLHALGAGRVLGGGDGRVAPRLTEWGHDGIKQRVHVRFHVEIRKLKRYID
AQHRDTRGSGITVLHVAMRAVALALRQVPELNGHQVLGRFLPSPTANVSC
ELRLRDGTFALLKVREVDQKSVVEISRALSLKTQALNSGRDVHYNRRLLI
LRWCPSILAPSLDACFAFLGAGLGLSLSWLGVRAFPQGECVILTSPAITS
SRESTCEADFEVFPAPTPSASFLTPLVLTIGAIRNVPKVGSESRDHLQRH
RDVVLVPALTLSLHAQLLKGAASLQHVRRLTELIHRYMDDPRSWEEEVGE
GRST
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Synonyms
Publications