NO01G04550, NO01G04550 (gene) Nannochloropsis oceanica

Overview
NameNO01G04550
Unique NameNO01G04550
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2370
Alignment locationchr1:1201751..1204120 +

Link to JBrowse

Properties
Property NameValue
DescriptionMfs transporter
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:1201751..1204120 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
GO:0006810transport
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR036259MFS_trans_sf
IPR011701MFS
Homology
[Close]
BLAST of NO01G04550 vs. NCBI_GenBank
Match: ETO76695.1 (hypothetical protein F444_07961 [Phytophthora parasitica P1976])

HSP 1 Score: 151.0 bits (380), Expect = 1.000e-32
Identity = 131/445 (29.44%), Postives = 210/445 (47.19%), Query Frame = 0 
Query:    8 RVAMILAACFQNLACGGLIFGWAAISSSL--------LIASNEEGGPALSRDAVHRLFVMATSINFTAPLLLGILLDAYGPRICSALSILLVGSGFVL-----FSASIPSFPTHLPAVILIAFGGPGVQSSIIHLSNLYPASKATVTSIITGSFNLSFFIFFVFDRLWNRFHFTYQEIFAGYSIVCAVAFSFSLFLWPDQPFSFQEQMLEEIVPDQASIARVGPIRAPSVFKKTSLAPPRPGQGGLPTLSSTTTHDATATAASRENTALLKPGSAAAAAMDDIKEASFWEQLRSAPFVRVTVFIVVASFWANFYIGTIDIQLADGHLLSPEKQNYMVRLFTAVTTAGVLGIPIVGGLMDRYGFVTTAAVTVSMAVIYGLGIIIAQAQGGILPLVLAFIAYALFRTFLFTYFFAYLADALGFRFFGVLAGVSFFIAGCAGLLQSPL 440
            R   +  A +Q     G+IFGW ++   L        L    E    A S D +   F MA S +  + LLLG++ D +GPR+  ++S++L+ +G +L     +  +       L  +IL+ F GPG+Q S IH+SNL+P + A V   I G   LSF IF +FD        +   IF  Y+ V  ++   ++   PD PF        E++P +     + P+R PSVFK+            +  L ST   D            +   G        D+   SF  Q+ S PF+ V  +  + S W NF++G+I   L        E  + + +L   V  + V+ IP VG L+++ G+  ++ +   +A+ + + ++ + + G I   V  F+ YA FRT +F   FAYL    GF+ +G L+G++F I G  GLLQ+P+
Sbjct:   17 RYLYVAFAIYQCFLGAGIIFGWTSLVPMLEKERIYNELCKPGETICTAQS-DRLQYAFTMAVSSSMWSNLLLGLVFDKFGPRVTKSISLVLLITGALLMGNAHYRKNSEGIDLLLYGMILVGFSGPGIQLSGIHMSNLFPEATALVACFIVGGLQLSFLIFTLFDLACVHLEMSMVTIFEVYAGVVFLSLIGTVLTEPDTPF--------EVIPSEEH-ELLSPMRLPSVFKEE-----------VSLLLSTPELDKYRKRHRLPTDEVFFDG--------DLHNRSFRTQVLSKPFLLVVFYFSILSLWCNFFLGSITGLLRWKGFPESEVASLLAKL-AFVLPSSVVFIPFVGYLLEKCGYTYSSVLCTVVALCFTV-MLSSMSTGWI---VAGFVTYAFFRTIMFPLLFAYLGHRFGFQHYGALSGIAFCIGGLVGLLQTPI 427
[Close]
BLAST of NO01G04550 vs. NCBI_GenBank
Match: XP_024582415.1 (major facilitator superfamily [Plasmopara halstedii] >CEG46046.1 major facilitator superfamily [Plasmopara halstedii])

HSP 1 Score: 144.8 bits (364), Expect = 7.200e-31
Identity = 129/450 (28.67%), Postives = 210/450 (46.67%), Query Frame = 0 
Query:    8 RVAMILAACFQNLACGGLIFGWAAISSSL-------LIASNEEGGPALSRDAVHRLFVMATSINFTAPLLLGILLDAYGPRICSALSILLVGSGFVL-----FSASIPSFPTHLPAVILIAFGGPGVQSSIIHLSNLYPASKATVTSIITGSFNLSFFIFFVFDRLWNRFHFTYQEIFAGYSIVCAVAFSFSLFLWPDQPFSFQEQMLEEIVPDQASIARVGPIRAPSVFK--KTSLAPPRPGQGGLPTLSSTTTHDATATAASRENTALLKPGSAAAAAMDDIKEASFWEQLRSAPFVRVTVFIVVASFWANFYIGTIDIQLADGHLLSPEKQNYMVRLFTAVTTAGVLGIPIVGGLMDRYGFVTTAAVTVSMAVIYGLGIIIAQAQGGILPLVLAFIAYALFRTFLFTYFFAYLADALGFRFFGVLAGVSFFIAGCAGLLQSPLMQFG 444
            R   +  A FQ     G+IFGW ++   L        +   EE       + +   F MA   +  + LLLG++LD +GPR+  ++S++ + +G +L     +  +       L  ++L+ F GPG+Q S IH+SNL+P S A V  +I G   LSF IF +    +     +   IF  Y+ V  ++   +L   PD P         E+V     I  + P+  PSVFK  +TSL         L T      H        ++N  +   G        D+   SF  Q+ S PF+ +  +  + S W NF++G+I+  L    LL  E  + + +L   V    V+ IP VG L+++ G    + +  ++A +    ++ + + G I   V  F+ YA FRTF++   F+YL    GF+ +G L+G++F + G  GLLQ+P+   G
Sbjct:   12 RYFYVAFAVFQCFLGAGVIFGWTSLLPMLEKEKIYFELCIYEETICTAQSNRLQYAFTMAVFSSMWSNLLLGLVLDKFGPRVTKSISLVFLIAGALLMGNAHYRDNAKDNDLLLYGMVLVGFSGPGIQLSGIHMSNLFPESTALVACLIVGGLQLSFLIFALISFAYMHLGMSMATIFEIYATVLLLSLVGTLLTEPDTPL--------EVVSCNTHIV-LSPMGLPSVFKDEETSLL--------LSTPELQKNH--------QQNDKIFTDG--------DLHNRSFRTQVLSKPFLLIAFYFSILSLWCNFFLGSINGLLRWKGLLDGEVNDLLGKL-AFVLPGSVIFIPFVGYLLEKCGH-QYSLLLCTLAALCTTILLSSMSTGWI---VAGFVTYAFFRTFMYPLLFSYLGYRFGFQHYGALSGIAFGVGGIIGLLQTPIAAIG 423
[Close]
BLAST of NO01G04550 vs. NCBI_GenBank
Match: XP_008904636.1 (hypothetical protein, variant 4 [Phytophthora parasitica INRA-310] >XP_008904637.1 hypothetical protein, variant 5 [Phytophthora parasitica INRA-310] >ETI47970.1 hypothetical protein, variant 2 [Phytophthora parasitica P1569] >ETI47971.1 hypothetical protein, variant 3 [Phytophthora parasitica P1569] >ETK87901.1 hypothetical protein, variant 4 [Phytophthora parasitica] >ETK87902.1 hypothetical protein, variant 5 [Phytophthora parasitica] >ETL41321.1 hypothetical protein, variant 4 [Phytophthora parasitica] >ETL41322.1 hypothetical protein, variant 5 [Phytophthora parasitica] >ETL94493.1 hypothetical protein, variant 2 [Phytophthora parasitica] >ETL94494.1 hypothetical protein, variant 3 [Phytophthora parasitica] >ETM47714.1 hypothetical protein, variant 2 [Phytophthora parasitica] >ETM47715.1 hypothetical protein, variant 3 [Phytophthora parasitica] >ETN10199.1 hypothetical protein, variant 4 [Phytophthora parasitica INRA-310] >ETN10200.1 hypothetical protein, variant 5 [Phytophthora parasitica INRA-310] >ETP17775.1 hypothetical protein, variant 4 [Phytophthora parasitica CJ01A1] >ETP17776.1 hypothetical protein, variant 5 [Phytophthora parasitica CJ01A1] >ETP45811.1 hypothetical protein, variant 2 [Phytophthora parasitica P10297] >ETP45812.1 hypothetical protein, variant 3 [Phytophthora parasitica P10297])

HSP 1 Score: 144.1 bits (362), Expect = 1.200e-30
Identity = 116/386 (30.05%), Postives = 190/386 (49.22%), Query Frame = 0 
Query:   59 MATSINFTAPLLLGILLDAYGPRICSALSILLVGSGFVL-----FSASIPSFPTHLPAVILIAFGGPGVQSSIIHLSNLYPASKATVTSIITGSFNLSFFIFFVFDRLWNRFHFTYQEIFAGYSIVCAVAFSFSLFLWPDQPFSFQEQMLEEIVPDQASIARVGPIRAPSVFKKTSLAPPRPGQGGLPTLSSTTTHDATATAASRENTALLKPGSAAAAAMDDIKEASFWEQLRSAPFVRVTVFIVVASFWANFYIGTIDIQLADGHLLSPEKQNYMVRLFTAVTTAGVLGIPIVGGLMDRYGFVTTAAVTVSMAVIYGLGIIIAQAQGGILPLVLAFIAYALFRTFLFTYFFAYLADALGFRFFGVLAGVSFFIAGCAGLLQSPL 440
            MA S +  + LLLG++ D +GPR+  ++S++L+ +G +L     +  +       L  +IL+ F GPG+Q S IH+SNL+P + A V   I G   LSF IF +FD        +   IF  Y+ V  ++   ++   PD PF        E++P +     + P+R PSVFK+  ++           L ST   D            +   G        D+   SF  Q+ S PF+ V  +  + S W NF++G+I   L        E  + + +L   V  + V+ IP VG L+++ G+  ++ +   +A+ + + ++ + + G I   V  F+ YA FRT +F   FAYL    GF+ +G L+G++F I G  GLLQ+P+
Sbjct:    1 MAVSSSMWSNLLLGLVFDKFGPRVTKSISLVLLITGALLMGNAHYRENSEGIDLLLYGMILVGFSGPGIQLSGIHMSNLFPEATALVACFIVGGLQLSFLIFTLFDLACVHLEMSMVTIFEVYAGVVFLSLIGTVLTEPDTPF--------EVIPSEEH-ELLSPMRLPSVFKEEEVS----------LLLSTPELDKYRKRHRLPTDEVFFDG--------DLHNRSFRTQVLSKPFLLVVFYFSILSLWCNFFLGSITGLLRWKGFPESEVASLLAKL-AFVLPSSVVFIPFVGYLLEKCGYTYSSVLCTVVALCFTV-MLSSMSTGWI---VAGFVTYAFFRTIMFPLLFAYLGHRFGFQHYGALSGIAFCIGGLVGLLQTPI 354
[Close]
BLAST of NO01G04550 vs. NCBI_GenBank
Match: XP_008904638.1 (hypothetical protein, variant 6 [Phytophthora parasitica INRA-310] >XP_008904639.1 hypothetical protein, variant 7 [Phytophthora parasitica INRA-310] >ETI47972.1 hypothetical protein, variant 4 [Phytophthora parasitica P1569] >ETI47973.1 hypothetical protein, variant 5 [Phytophthora parasitica P1569] >ETK87903.1 hypothetical protein, variant 6 [Phytophthora parasitica] >ETK87904.1 hypothetical protein, variant 7 [Phytophthora parasitica] >ETL41323.1 hypothetical protein, variant 6 [Phytophthora parasitica] >ETL41324.1 hypothetical protein, variant 7 [Phytophthora parasitica] >ETL94495.1 hypothetical protein, variant 4 [Phytophthora parasitica] >ETL94496.1 hypothetical protein, variant 5 [Phytophthora parasitica] >ETM47716.1 hypothetical protein, variant 4 [Phytophthora parasitica] >ETM47717.1 hypothetical protein, variant 5 [Phytophthora parasitica] >ETN10201.1 hypothetical protein, variant 6 [Phytophthora parasitica INRA-310] >ETN10202.1 hypothetical protein, variant 7 [Phytophthora parasitica INRA-310] >ETP17777.1 hypothetical protein, variant 6 [Phytophthora parasitica CJ01A1] >ETP17778.1 hypothetical protein, variant 7 [Phytophthora parasitica CJ01A1] >ETP45813.1 hypothetical protein, variant 4 [Phytophthora parasitica P10297] >ETP45814.1 hypothetical protein, variant 5 [Phytophthora parasitica P10297])

HSP 1 Score: 144.1 bits (362), Expect = 1.200e-30
Identity = 116/386 (30.05%), Postives = 190/386 (49.22%), Query Frame = 0 
Query:   59 MATSINFTAPLLLGILLDAYGPRICSALSILLVGSGFVL-----FSASIPSFPTHLPAVILIAFGGPGVQSSIIHLSNLYPASKATVTSIITGSFNLSFFIFFVFDRLWNRFHFTYQEIFAGYSIVCAVAFSFSLFLWPDQPFSFQEQMLEEIVPDQASIARVGPIRAPSVFKKTSLAPPRPGQGGLPTLSSTTTHDATATAASRENTALLKPGSAAAAAMDDIKEASFWEQLRSAPFVRVTVFIVVASFWANFYIGTIDIQLADGHLLSPEKQNYMVRLFTAVTTAGVLGIPIVGGLMDRYGFVTTAAVTVSMAVIYGLGIIIAQAQGGILPLVLAFIAYALFRTFLFTYFFAYLADALGFRFFGVLAGVSFFIAGCAGLLQSPL 440
            MA S +  + LLLG++ D +GPR+  ++S++L+ +G +L     +  +       L  +IL+ F GPG+Q S IH+SNL+P + A V   I G   LSF IF +FD        +   IF  Y+ V  ++   ++   PD PF        E++P +     + P+R PSVFK+  ++           L ST   D            +   G        D+   SF  Q+ S PF+ V  +  + S W NF++G+I   L        E  + + +L   V  + V+ IP VG L+++ G+  ++ +   +A+ + + ++ + + G I   V  F+ YA FRT +F   FAYL    GF+ +G L+G++F I G  GLLQ+P+
Sbjct:    1 MAVSSSMWSNLLLGLVFDKFGPRVTKSISLVLLITGALLMGNAHYRENSEGIDLLLYGMILVGFSGPGIQLSGIHMSNLFPEATALVACFIVGGLQLSFLIFTLFDLACVHLEMSMVTIFEVYAGVVFLSLIGTVLTEPDTPF--------EVIPSEEH-ELLSPMRLPSVFKEEEVS----------LLLSTPELDKYRKRHRLPTDEVFFDG--------DLHNRSFRTQVLSKPFLLVVFYFSILSLWCNFFLGSITGLLRWKGFPESEVASLLAKL-AFVLPSSVVFIPFVGYLLEKCGYTYSSVLCTVVALCFTV-MLSSMSTGWI---VAGFVTYAFFRTIMFPLLFAYLGHRFGFQHYGALSGIAFCIGGLVGLLQTPI 354
[Close]
BLAST of NO01G04550 vs. NCBI_GenBank
Match: ETO76696.1 (hypothetical protein, variant [Phytophthora parasitica P1976])

HSP 1 Score: 142.9 bits (359), Expect = 2.700e-30
Identity = 116/386 (30.05%), Postives = 189/386 (48.96%), Query Frame = 0 
Query:   59 MATSINFTAPLLLGILLDAYGPRICSALSILLVGSGFVL-----FSASIPSFPTHLPAVILIAFGGPGVQSSIIHLSNLYPASKATVTSIITGSFNLSFFIFFVFDRLWNRFHFTYQEIFAGYSIVCAVAFSFSLFLWPDQPFSFQEQMLEEIVPDQASIARVGPIRAPSVFKKTSLAPPRPGQGGLPTLSSTTTHDATATAASRENTALLKPGSAAAAAMDDIKEASFWEQLRSAPFVRVTVFIVVASFWANFYIGTIDIQLADGHLLSPEKQNYMVRLFTAVTTAGVLGIPIVGGLMDRYGFVTTAAVTVSMAVIYGLGIIIAQAQGGILPLVLAFIAYALFRTFLFTYFFAYLADALGFRFFGVLAGVSFFIAGCAGLLQSPL 440
            MA S +  + LLLG++ D +GPR+  ++S++L+ +G +L     +  +       L  +IL+ F GPG+Q S IH+SNL+P + A V   I G   LSF IF +FD        +   IF  Y+ V  ++   ++   PD PF        E++P +     + P+R PSVFK+            +  L ST   D            +   G        D+   SF  Q+ S PF+ V  +  + S W NF++G+I   L        E  + + +L   V  + V+ IP VG L+++ G+  ++ +   +A+ + + ++ + + G I   V  F+ YA FRT +F   FAYL    GF+ +G L+G++F I G  GLLQ+P+
Sbjct:    1 MAVSSSMWSNLLLGLVFDKFGPRVTKSISLVLLITGALLMGNAHYRKNSEGIDLLLYGMILVGFSGPGIQLSGIHMSNLFPEATALVACFIVGGLQLSFLIFTLFDLACVHLEMSMVTIFEVYAGVVFLSLIGTVLTEPDTPF--------EVIPSEEH-ELLSPMRLPSVFKEE-----------VSLLLSTPELDKYRKRHRLPTDEVFFDG--------DLHNRSFRTQVLSKPFLLVVFYFSILSLWCNFFLGSITGLLRWKGFPESEVASLLAKL-AFVLPSSVVFIPFVGYLLEKCGYTYSSVLCTVVALCFTV-MLSSMSTGWI---VAGFVTYAFFRTIMFPLLFAYLGHRFGFQHYGALSGIAFCIGGLVGLLQTPI 353
[Close]
BLAST of NO01G04550 vs. NCBI_GenBank
Match: KUF76956.1 (Major Facilitator Superfamily (MFS) [Phytophthora nicotianae])

HSP 1 Score: 141.0 bits (354), Expect = 1.000e-29
Identity = 130/467 (27.84%), Postives = 210/467 (44.97%), Query Frame = 0 
Query:    8 RVAMILAACFQNLACGGLIFGWAAISSSL--------LIASNEEGGPAL---SRDAVHRLFVMATSINFTAPLLLGILLDAY-------------------GPRICSALSILLVGSGFVL-----FSASIPSFPTHLPAVILIAFGGPGVQSSIIHLSNLYPASKATVTSIITGSFNLSFFIFFVFDRLWNRFHFTYQEIFAGYSIVCAVAFSFSLFLWPDQPFSFQEQMLEEIVPDQASIARVGPIRAPSVFKKTSLAPPRPGQGGLPTLSSTTTHDATATAASRENTALLKPGSAAAAAMDDIKEASFWEQLRSAPFVRVTVFIVVASFWANFYIGTIDIQLADGHLLSPEKQNYMVRLFTAVTTAGVLGIPIVGGLMDRYGFVTTAAVTVSMAVIYGLGIIIAQAQGGILPLVLAFIAYALFRTFLFTYFFAYLADALGFRFFGVLAGVSFFIAGCAGLLQSPL 440
            R   +  A +Q     G+IFGW ++   L        L    E     +     D +   F MA S +  + LLLG++ D Y                   GPR+  ++S++L+ +G +L     +  +       L  +IL+ F GPG+Q S IH+SNL+P + A V   I G   LSF IF +FD        +   IF  Y+ V  ++   ++   PD PF        E++P +     + P+R PSVFK+  ++           L ST   D            +   G        D+   SF  Q+ S PF+ V  +  + S W NF++G+I   L        E  + + +L   V  + V+ IP VG L+++ G+  ++ +   +A+ + + ++ + + G I   V  F+ YA FRT +F   FAYL    GF+ +G L+G++F I G  GLLQ+P+
Sbjct:   17 RYLYVAFAIYQCFLGAGIIFGWTSLVPMLEKERIYNELCKPGETSTSVVCTAQSDRLQYAFTMAVSSSMWSNLLLGLVFDKYVMTIVAILRQTDDICVCRFGPRVTKSISLVLLITGALLMGNAHYRENSEGIDLLLYGMILVGFSGPGIQLSGIHMSNLFPEATALVACFIVGGLQLSFLIFTLFDLACVHLEMSMVTIFEVYAGVVFLSLIGTVLTEPDTPF--------EVIPSEEH-ELLSPMRLPSVFKEEEVS----------LLLSTPELDKYRKRHRLPTDEVFFDG--------DLHNRSFRTQVLSKPFLLVVFYFSILSLWCNFFLGSITGLLRWKGFPESEVASLLAKL-AFVLPSSVVFIPFVGYLLEKCGYTYSSVLCTVVALCFTV-MLSSMSTGWI---VAGFVTYAFFRTIMFPLLFAYLGHRFGFQHYGALSGIAFCIGGLVGLLQTPI 451
[Close]
BLAST of NO01G04550 vs. NCBI_GenBank
Match: XP_008904634.1 (hypothetical protein, variant 2 [Phytophthora parasitica INRA-310] >ETK87899.1 hypothetical protein, variant 2 [Phytophthora parasitica] >ETL41319.1 hypothetical protein, variant 2 [Phytophthora parasitica] >ETN10197.1 hypothetical protein, variant 2 [Phytophthora parasitica INRA-310] >ETP17773.1 hypothetical protein, variant 2 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 134.0 bits (336), Expect = 1.300e-27
Identity = 117/405 (28.89%), Postives = 190/405 (46.91%), Query Frame = 0 
Query:   59 MATSINFTAPLLLGILLDAY-------------------GPRICSALSILLVGSGFVL-----FSASIPSFPTHLPAVILIAFGGPGVQSSIIHLSNLYPASKATVTSIITGSFNLSFFIFFVFDRLWNRFHFTYQEIFAGYSIVCAVAFSFSLFLWPDQPFSFQEQMLEEIVPDQASIARVGPIRAPSVFKKTSLAPPRPGQGGLPTLSSTTTHDATATAASRENTALLKPGSAAAAAMDDIKEASFWEQLRSAPFVRVTVFIVVASFWANFYIGTIDIQLADGHLLSPEKQNYMVRLFTAVTTAGVLGIPIVGGLMDRYGFVTTAAVTVSMAVIYGLGIIIAQAQGGILPLVLAFIAYALFRTFLFTYFFAYLADALGFRFFGVLAGVSFFIAGCAGLLQSPL 440
            MA S +  + LLLG++ D Y                   GPR+  ++S++L+ +G +L     +  +       L  +IL+ F GPG+Q S IH+SNL+P + A V   I G   LSF IF +FD        +   IF  Y+ V  ++   ++   PD PF        E++P +     + P+R PSVFK+  ++           L ST   D            +   G        D+   SF  Q+ S PF+ V  +  + S W NF++G+I   L        E  + + +L   V  + V+ IP VG L+++ G+  ++ +   +A+ + + ++ + + G I   V  F+ YA FRT +F   FAYL    GF+ +G L+G++F I G  GLLQ+P+
Sbjct:    1 MAVSSSMWSNLLLGLVFDKYVMTIVAILRQTDDICVCRFGPRVTKSISLVLLITGALLMGNAHYRENSEGIDLLLYGMILVGFSGPGIQLSGIHMSNLFPEATALVACFIVGGLQLSFLIFTLFDLACVHLEMSMVTIFEVYAGVVFLSLIGTVLTEPDTPF--------EVIPSEEH-ELLSPMRLPSVFKEEEVS----------LLLSTPELDKYRKRHRLPTDEVFFDG--------DLHNRSFRTQVLSKPFLLVVFYFSILSLWCNFFLGSITGLLRWKGFPESEVASLLAKL-AFVLPSSVVFIPFVGYLLEKCGYTYSSVLCTVVALCFTV-MLSSMSTGWI---VAGFVTYAFFRTIMFPLLFAYLGHRFGFQHYGALSGIAFCIGGLVGLLQTPI 373
[Close]
BLAST of NO01G04550 vs. NCBI_GenBank
Match: XP_008904635.1 (hypothetical protein, variant 3 [Phytophthora parasitica INRA-310] >ETK87900.1 hypothetical protein, variant 3 [Phytophthora parasitica] >ETL41320.1 hypothetical protein, variant 3 [Phytophthora parasitica] >ETN10198.1 hypothetical protein, variant 3 [Phytophthora parasitica INRA-310] >ETP17774.1 hypothetical protein, variant 3 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 134.0 bits (336), Expect = 1.300e-27
Identity = 117/405 (28.89%), Postives = 190/405 (46.91%), Query Frame = 0 
Query:   59 MATSINFTAPLLLGILLDAY-------------------GPRICSALSILLVGSGFVL-----FSASIPSFPTHLPAVILIAFGGPGVQSSIIHLSNLYPASKATVTSIITGSFNLSFFIFFVFDRLWNRFHFTYQEIFAGYSIVCAVAFSFSLFLWPDQPFSFQEQMLEEIVPDQASIARVGPIRAPSVFKKTSLAPPRPGQGGLPTLSSTTTHDATATAASRENTALLKPGSAAAAAMDDIKEASFWEQLRSAPFVRVTVFIVVASFWANFYIGTIDIQLADGHLLSPEKQNYMVRLFTAVTTAGVLGIPIVGGLMDRYGFVTTAAVTVSMAVIYGLGIIIAQAQGGILPLVLAFIAYALFRTFLFTYFFAYLADALGFRFFGVLAGVSFFIAGCAGLLQSPL 440
            MA S +  + LLLG++ D Y                   GPR+  ++S++L+ +G +L     +  +       L  +IL+ F GPG+Q S IH+SNL+P + A V   I G   LSF IF +FD        +   IF  Y+ V  ++   ++   PD PF        E++P +     + P+R PSVFK+  ++           L ST   D            +   G        D+   SF  Q+ S PF+ V  +  + S W NF++G+I   L        E  + + +L   V  + V+ IP VG L+++ G+  ++ +   +A+ + + ++ + + G I   V  F+ YA FRT +F   FAYL    GF+ +G L+G++F I G  GLLQ+P+
Sbjct:    1 MAVSSSMWSNLLLGLVFDKYVMTIVAILRQTDDICVCRFGPRVTKSISLVLLITGALLMGNAHYRENSEGIDLLLYGMILVGFSGPGIQLSGIHMSNLFPEATALVACFIVGGLQLSFLIFTLFDLACVHLEMSMVTIFEVYAGVVFLSLIGTVLTEPDTPF--------EVIPSEEH-ELLSPMRLPSVFKEEEVS----------LLLSTPELDKYRKRHRLPTDEVFFDG--------DLHNRSFRTQVLSKPFLLVVFYFSILSLWCNFFLGSITGLLRWKGFPESEVASLLAKL-AFVLPSSVVFIPFVGYLLEKCGYTYSSVLCTVVALCFTV-MLSSMSTGWI---VAGFVTYAFFRTIMFPLLFAYLGHRFGFQHYGALSGIAFCIGGLVGLLQTPI 373
[Close]
BLAST of NO01G04550 vs. NCBI_GenBank
Match: ETI47974.1 (hypothetical protein, variant 6 [Phytophthora parasitica P1569] >ETL94497.1 hypothetical protein, variant 6 [Phytophthora parasitica] >ETM47718.1 hypothetical protein, variant 6 [Phytophthora parasitica] >ETP45815.1 hypothetical protein, variant 6 [Phytophthora parasitica P10297])

HSP 1 Score: 124.8 bits (312), Expect = 7.700e-25
Identity = 101/331 (30.51%), Postives = 160/331 (48.34%), Query Frame = 0 
Query:  109 LPAVILIAFGGPGVQSSIIHLSNLYPASKATVTSIITGSFNLSFFIFFVFDRLWNRFHFTYQEIFAGYSIVCAVAFSFSLFLWPDQPFSFQEQMLEEIVPDQASIARVGPIRAPSVFKKTSLAPPRPGQGGLPTLSSTTTHDATATAASRENTALLKPGSAAAAAMDDIKEASFWEQLRSAPFVRVTVFIVVASFWANFYIGTIDIQLADGHLLSPEKQNYMVRLFTAVTTAGVLGIPIVGGLMDRYGFVTTAAVTVSMAVIYGLGIIIAQAQGGILPLVLAFIAYALFRTFLFTYFFAYLADALGFRFFGVLAGVSFFIAGCAGLLQSPL 440
            L  +IL+ F GPG+Q S IH+SNL+P + A V   I G   LSF IF +FD        +   IF  Y+ V  ++   ++   PD PF        E++P +     + P+R PSVFK+  ++           L ST   D            +   G        D+   SF  Q+ S PF+ V  +  + S W NF++G+I   L        E  + + +L   V  + V+ IP VG L+++ G+  ++ +   +A+ + + ++ + + G I   V  F+ YA FRT +F   FAYL    GF+ +G L+G++F I G  GLLQ+P+
Sbjct:   17 LYGMILVGFSGPGIQLSGIHMSNLFPEATALVACFIVGGLQLSFLIFTLFDLACVHLEMSMVTIFEVYAGVVFLSLIGTVLTEPDTPF--------EVIPSEEH-ELLSPMRLPSVFKEEEVS----------LLLSTPELDKYRKRHRLPTDEVFFDG--------DLHNRSFRTQVLSKPFLLVVFYFSILSLWCNFFLGSITGLLRWKGFPESEVASLLAKL-AFVLPSSVVFIPFVGYLLEKCGYTYSSVLCTVVALCFTV-MLSSMSTGWI---VAGFVTYAFFRTIMFPLLFAYLGHRFGFQHYGALSGIAFCIGGLVGLLQTPI 315
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BLAST of NO01G04550 vs. NCBI_GenBank
Match: ETI47975.1 (hypothetical protein, variant 7 [Phytophthora parasitica P1569] >ETL94498.1 hypothetical protein, variant 7 [Phytophthora parasitica] >ETM47719.1 hypothetical protein, variant 7 [Phytophthora parasitica] >ETP45816.1 hypothetical protein, variant 7 [Phytophthora parasitica P10297])

HSP 1 Score: 124.8 bits (312), Expect = 7.700e-25
Identity = 101/331 (30.51%), Postives = 160/331 (48.34%), Query Frame = 0 
Query:  109 LPAVILIAFGGPGVQSSIIHLSNLYPASKATVTSIITGSFNLSFFIFFVFDRLWNRFHFTYQEIFAGYSIVCAVAFSFSLFLWPDQPFSFQEQMLEEIVPDQASIARVGPIRAPSVFKKTSLAPPRPGQGGLPTLSSTTTHDATATAASRENTALLKPGSAAAAAMDDIKEASFWEQLRSAPFVRVTVFIVVASFWANFYIGTIDIQLADGHLLSPEKQNYMVRLFTAVTTAGVLGIPIVGGLMDRYGFVTTAAVTVSMAVIYGLGIIIAQAQGGILPLVLAFIAYALFRTFLFTYFFAYLADALGFRFFGVLAGVSFFIAGCAGLLQSPL 440
            L  +IL+ F GPG+Q S IH+SNL+P + A V   I G   LSF IF +FD        +   IF  Y+ V  ++   ++   PD PF        E++P +     + P+R PSVFK+  ++           L ST   D            +   G        D+   SF  Q+ S PF+ V  +  + S W NF++G+I   L        E  + + +L   V  + V+ IP VG L+++ G+  ++ +   +A+ + + ++ + + G I   V  F+ YA FRT +F   FAYL    GF+ +G L+G++F I G  GLLQ+P+
Sbjct:   17 LYGMILVGFSGPGIQLSGIHMSNLFPEATALVACFIVGGLQLSFLIFTLFDLACVHLEMSMVTIFEVYAGVVFLSLIGTVLTEPDTPF--------EVIPSEEH-ELLSPMRLPSVFKEEEVS----------LLLSTPELDKYRKRHRLPTDEVFFDG--------DLHNRSFRTQVLSKPFLLVVFYFSILSLWCNFFLGSITGLLRWKGFPESEVASLLAKL-AFVLPSSVVFIPFVGYLLEKCGYTYSSVLCTVVALCFTV-MLSSMSTGWI---VAGFVTYAFFRTIMFPLLFAYLGHRFGFQHYGALSGIAFCIGGLVGLLQTPI 315
The following BLAST results are available for this feature:
BLAST of NO01G04550 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
ETO76695.11.000e-3229.44hypothetical protein F444_07961 [Phytophthora para... [more]
XP_024582415.17.200e-3128.67major facilitator superfamily [Plasmopara halstedi... [more]
XP_008904636.11.200e-3030.05hypothetical protein, variant 4 [Phytophthora para... [more]
XP_008904638.11.200e-3030.05hypothetical protein, variant 6 [Phytophthora para... [more]
ETO76696.12.700e-3030.05hypothetical protein, variant [Phytophthora parasi... [more]
KUF76956.11.000e-2927.84Major Facilitator Superfamily (MFS) [Phytophthora ... [more]
XP_008904634.11.300e-2728.89hypothetical protein, variant 2 [Phytophthora para... [more]
XP_008904635.11.300e-2728.89hypothetical protein, variant 3 [Phytophthora para... [more]
ETI47974.17.700e-2530.51hypothetical protein, variant 6 [Phytophthora para... [more]
ETI47975.17.700e-2530.51hypothetical protein, variant 7 [Phytophthora para... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL005nonsL005Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR047ncniR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR091ngnoR091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK007821NSK007821Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G04550.1NO01G04550.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|551204gene_475Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100028g4gene1245Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G04550.1NO01G04550.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G04550 ID=NO01G04550|Name=NO01G04550|organism=Nannochloropsis oceanica|type=gene|length=2370bp
ATGACGAAGCCCAAAGCTCCTCGGGTAGCCATGATTCTGGCTGCCTGCTT
TCAAAACTTAGCATGTGGTGGACTCATCTTCGGATGGGCCGCCATCTCCA
GCTCCCTCCTTATCGCGTCAAACGAAGAGGGAGGCCCCGCCCTAAGTCGT
GACGCCGTCCATAGGCTCTTTGTCATGGCCACTTCCATAAACTTCACCGC
TCCCCTCCTCCTCGGTATCTTGCTCGATGCGTATGGACCACGCATATGTT
CTGCCTTGAGCATCTTGCTCGTCGGGAGCGGTTTTGTCCTCTTCTCGGCC
TCCATCCCCTCTTTCCCCACTCACCTTCCAGCCGTCATTCTCATTGCCTT
TGGTGGCCCAGGAGTGCAATCGTCGATAATCCACTTGTCGAACCTCTATC
CAGCCAGCAAGGCTACCGTCACCAGTATCATTACCGGTTCCTTCAACCTC
TCCTTCTTCATCTTCTTCGTCTTCGATCGCCTGTGGAATCGCTTCCATTT
CACATACCAAGAGATATTTGCAGGGTATAGCATAGTGTGTGCTGTGGCCT
TTTCGTTCTCCCTCTTCCTATGGCCCGATCAACCCTTCTCCTTTCAAGAG
CAGATGCTGGAAGAAATCGTACCCGATCAAGCCTCCATTGCTCGCGTTGG
TCCTATCCGCGCTCCTTCCGTCTTCAAAAAAACGTCCTTGGCCCCCCCGA
GGCCAGGGCAGGGAGGGCTACCCACCCTCTCCTCCACCACCACCCATGAT
GCCACCGCCACTGCAGCTAGTCGGGAAAATACGGCGTTGCTGAAACCTGG
CTCAGCTGCAGCGGCAGCGATGGATGACATTAAGGAAGCCTCATTTTGGG
AACAACTTCGGTCGGCGCCTTTTGTGAGGGTGACAGTCTTCATCGTCGTG
GCCTCGTTTTGGGCAAATTTTTACATTGGGACGATAGATATTCAACTGGC
CGACGGGCATCTGCTTAGTCCCGAAAAACAGAACTATATGGTGCGGCTGT
TTACGGCTGTTACGACGGCTGGAGTGTTAGGAATTCCAATTGTGGGGGGG
TTGATGGACAGgtgggtggggaggaaaaagagagaggcaggaagggaggg
agggcagaacatgtatgttgaactctatcttgattttatgtttcatagac
tatgcacctgttccttcctcccttcctcccgtcctcctccagagcacgga
ttaggggccagtgctgccgttacagtcgctgcccacagccgatttgggac
aattatcgctcaccatcctttattccctctatcccacattccctactttc
ctgcctttcctcctctctagATACGGTTTTGTCACCACTGCTGCTGTCAC
TGTGTCCATGGCCGTGATCTACGGGCTCGGGATCATCATCGCTCAAGCTC
AAGGAGGTATCCTCCCCCTCGTCCTTGCATTTATCGCCTATGCCTTGTTT
CGGACCTTCTTGTTTACCTATTTCTTCGCGTACCTCGCCGATGCCCTCGG
CTTTCGTTTCTTTGGTGTGCTGGCGGGGGTATCCTTTTTCATCGCCGGTT
GCGCGGGTTTGCTTCAATCCCCTCTCATGCAGTTCGGGGCGGGCAATTGT
CATTTGACCCTCGAGCCGTTATCGGGCTGTGACAGTGGGCGGTGGTCCAC
GATTAATTTTTATCAACTGGCCTGCCTGGCATCATTGTATGTGATTCCAT
TGATGGATATGTGGGCAGCGCGTAAAGCGGACGCGCAGAGGAAGGTGGTA
AGAGGGAAGGAGGGGGGGAGGGGGGGGAGGCGTTGAGGTCGACGTACCAG
ACGGTGAGTGGGTTGAAACAACAGCAGCCGAGAGTGGCGGCGGGTGCGAC
AGGAGGGAAGGGGGGAAGGGATGGAGGCGGGGTAAGGAGGAGCGAGGTGG
TTTAGAGCGGAGGAGGGTGGAGGGAAAGACTTGGTCGTGTGTGTAGGTGG
GTGTCGATGTGTGCACGTTACTCCATTTTGGTGCTGCTGTGCAATTGAAT
GTGAGATCATGAAGAAGTAGATTGAGTTAAGATTAAGTCATTAGGAGTTG
ACTCCTCATTCTCATTCTGGTGCAGCAACACACACGAGCGGATGCCTTTT
TCACACGAACAAGGACCACATTAATAGCGGGAATGATAGCAGTAGAAGCC
GTTGGTTTCTACGCCCAAGACGGTACAAAAAGACGTAGAAGGGCAAAGAA
AGAAACGCCTGTTGTGGGCGAGGAGAAAGGGAGCAGTATCATTTACGGGA
CTGAAAGCGAAAACTCGTCCATCAATAATAAAGTCGGAGTGATCACCCTC
ACAGCAGCCCACAACAGAAGCAACAGAAAGAACACAAACGCCAAATGAAA
ACATGTCCTATTTTTGCGAG
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protein sequence of NO01G04550.1

>NO01G04550.1-protein ID=NO01G04550.1-protein|Name=NO01G04550.1|organism=Nannochloropsis oceanica|type=polypeptide|length=509bp
MTKPKAPRVAMILAACFQNLACGGLIFGWAAISSSLLIASNEEGGPALSR
DAVHRLFVMATSINFTAPLLLGILLDAYGPRICSALSILLVGSGFVLFSA
SIPSFPTHLPAVILIAFGGPGVQSSIIHLSNLYPASKATVTSIITGSFNL
SFFIFFVFDRLWNRFHFTYQEIFAGYSIVCAVAFSFSLFLWPDQPFSFQE
QMLEEIVPDQASIARVGPIRAPSVFKKTSLAPPRPGQGGLPTLSSTTTHD
ATATAASRENTALLKPGSAAAAAMDDIKEASFWEQLRSAPFVRVTVFIVV
ASFWANFYIGTIDIQLADGHLLSPEKQNYMVRLFTAVTTAGVLGIPIVGG
LMDRYGFVTTAAVTVSMAVIYGLGIIIAQAQGGILPLVLAFIAYALFRTF
LFTYFFAYLADALGFRFFGVLAGVSFFIAGCAGLLQSPLMQFGAGNCHLT
LEPLSGCDSGRWSTINFYQLACLASLYVIPLMDMWAARKADAQRKVVRGK
EGGRGGRR*
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Synonyms
Publications