jgi.p|Nanoce1779_2|551204, gene_475 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|551204
Unique Namegene_475
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_3:1153269..1156108 +

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Properties
Property NameValue
TranscriptId551290
ProteinId551204
Product nameMajor facilitator superfamily domain-containing protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_3supercontigscaffold_3:1153269..1156108 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL047ncniL047Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO01G04550NO01G04550Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|551204mRNA_475-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|551204mRNA_475Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|551204

>mRNA_475-protein ID=mRNA_475-protein|Name=jgi.p|Nanoce1779_2|551204|organism=Nannochloropsis oceanica|type=polypeptide|length=549bp
MTKPKAPRVAMILAACFQNLACGGLIFGWAAISSSLLIASNEEGGPALSR
DAVHRLFVMATSINFTAPLLLGILLDAYGPRICSALSILLVGSGFVLFSA
SIPSFPTHLPAVILIAFGGPGVQSSIIHLSNLYPASKATVTSIITGSFNL
SFFIFFVFDRLWNRFHFTYQEIFAGYSIVCAVAFSFSLFLWPDQPFSFQE
QMLEEIVPDQASIARVGPIRAPSVFKKTSLAPPRPGQGGLPILSSTTTHD
ATASAASRENTALLNPGSAAAAAMDDIKEASFWEQLRSAPFVRVTVFIVV
ASFWANFYIGTIDIQLADGHLLSPEKQNYMVRLFTAVTTAGVLGIPIVGG
LMDRYGFVTTAAVTVSMAVIYGLGIIIAQAQGGILPLVLAFIAYALFRTF
LFTYFFAYLADALGFRFFGVLAGVSFFIAGCAGLLQSPLMQFGAGNCHLT
LEPLSGCDSGRWSTINFYQLACLASLYVIPLMDMWAARKADAQRKVVRGK
EGGRGGEALRSTYQTVSGLKQQQPRVAAGATGGKGGRDGGGVRRSEVV*
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Synonyms
Publications