NO01G04540, NO01G04540 (gene) Nannochloropsis oceanica

Overview
NameNO01G04540
Unique NameNO01G04540
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1704
Alignment locationchr1:1199061..1200764 -

Link to JBrowse

Properties
Property NameValue
DescriptionMethylthioribose kinase
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:1199061..1200764 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0046522S-methyl-5-thioribose kinase activity
Vocabulary: Biological Process
TermDefinition
GO:0009086methionine biosynthetic process
Vocabulary: INTERPRO
TermDefinition
IPR011009Kinase-like_dom
IPR009212Methylthioribose_kinase
Homology
[Close]
BLAST of NO01G04540 vs. NCBI_GenBank
Match: SCV40761.1 (5-methylthioribose kinase [Bacillus subtilis])

HSP 1 Score: 67.4 bits (163), Expect = 1.500e-7
Identity = 83/326 (25.46%), Postives = 124/326 (38.04%), Query Frame = 0 
Query:  205 LSTVLGHIPEEN-LDIRLLYSGQTNQAFRIYEKRNKRTPSSDGNNDEVDDVLFIKYAPDVVGDDGEVVMRKGGRTRTEWEGYREMGRVMPGMVPRTFVLEGGEEEGGGEGGLMVVEFLREYIPYAELLRRGQSGGGERGGQGVAVQVGRLLGRYHGTVMWNSAYVRE----EELWRTFENEEHIRFWER-SFARPLLGLLRGGGEEEGGGLTKEFLGEELREIVKKDGGDRGVVWAVETLCREYKGRKEALVHADMHAMNILIKQGGRXXXXXXXXXXXXXXXXXXXXXKIVDAEKTMWGPAGLDVGMFLANLAFYMATEEGGGRE 525
            L+  LG  P ++ L  + +  G  N  F IY++             E D  L IK A       GE       R R E       G  +P +VPR F  +        E G+ V+E L     + +++R+G   G       ++  +G  LG+   T+ ++S Y  E    ++L + F N E     ER  F  P                T +F  EELR  V+K   +  V      L + +    E L+H D+H  +I   +                        K++D E   +GP G DVG F+ANL       +GG RE
Sbjct:   20 LAVRLGLFPSKSTLTCQEIGDGNLNYVFHIYDQ-------------EHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSD-------TEMGVTVMEDL----SHLKIVRKGLIEGEHY--PHLSQHIGEFLGK---TLFYSSDYALEPKVKKQLVKQFTNPELCDITERLVFTDPFF-----------DHDTNDF-EEELRPFVEKLWNNDNVKIEAAKLKKSFLTSAETLIHGDLHTGSIFASE---------------------HETKVIDPEFAFYGPIGFDVGQFIANLFLNALGRDGGDRE 283
[Close]
BLAST of NO01G04540 vs. NCBI_GenBank
Match: WP_087987169.1 (S-methyl-5-thioribose kinase [Bacillus subtilis] >OUL06905.1 S-methyl-5-thioribose kinase [Bacillus subtilis])

HSP 1 Score: 67.4 bits (163), Expect = 1.500e-7
Identity = 83/326 (25.46%), Postives = 124/326 (38.04%), Query Frame = 0 
Query:  205 LSTVLGHIPEEN-LDIRLLYSGQTNQAFRIYEKRNKRTPSSDGNNDEVDDVLFIKYAPDVVGDDGEVVMRKGGRTRTEWEGYREMGRVMPGMVPRTFVLEGGEEEGGGEGGLMVVEFLREYIPYAELLRRGQSGGGERGGQGVAVQVGRLLGRYHGTVMWNSAYVRE----EELWRTFENEEHIRFWER-SFARPLLGLLRGGGEEEGGGLTKEFLGEELREIVKKDGGDRGVVWAVETLCREYKGRKEALVHADMHAMNILIKQGGRXXXXXXXXXXXXXXXXXXXXXKIVDAEKTMWGPAGLDVGMFLANLAFYMATEEGGGRE 525
            L+  LG  P ++ L  + +  G  N  F IY++             E D  L IK A       GE       R R E       G  +P +VPR F  +        E G+ V+E L     + +++R+G   G       ++  +G  LG+   T+ ++S Y  E    ++L + F N E     ER  F  P                T +F  EELR  V+K   +  V      L + +    E L+H D+H  +I   +                        K++D E   +GP G DVG F+ANL       +GG RE
Sbjct:   22 LAVRLGLFPSKSTLTCQEIGDGNLNYVFHIYDQ-------------EHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSD-------TEMGVTVMEDL----SHLKIVRKGLIEGEHY--PHLSQHIGEFLGK---TLFYSSDYALEPKVKKQLVKQFTNPELCDITERLVFTDPFF-----------DHDTNDF-EEELRPFVEKLWNNDNVKIEAAKLKKSFLTSAETLIHGDLHTGSIFASE---------------------HETKVIDPEFAFYGPIGFDVGQFIANLFLNALGRDGGDRE 285
[Close]
BLAST of NO01G04540 vs. NCBI_GenBank
Match: OIS67335.1 (S-methyl-5-thioribose kinase [Bacillus subtilis] >OIS70101.1 S-methyl-5-thioribose kinase [Bacillus subtilis] >OIS71402.1 S-methyl-5-thioribose kinase [Bacillus subtilis])

HSP 1 Score: 66.2 bits (160), Expect = 3.400e-7
Identity = 82/326 (25.15%), Postives = 123/326 (37.73%), Query Frame = 0 
Query:  205 LSTVLGHIPEEN-LDIRLLYSGQTNQAFRIYEKRNKRTPSSDGNNDEVDDVLFIKYAPDVVGDDGEVVMRKGGRTRTEWEGYREMGRVMPGMVPRTFVLEGGEEEGGGEGGLMVVEFLREYIPYAELLRRGQSGGGERGGQGVAVQVGRLLGRYHGTVMWNSAYVRE----EELWRTFENEEHIRFWER-SFARPLLGLLRGGGEEEGGGLTKEFLGEELREIVKKDGGDRGVVWAVETLCREYKGRKEALVHADMHAMNILIKQGGRXXXXXXXXXXXXXXXXXXXXXKIVDAEKTMWGPAGLDVGMFLANLAFYMATEEGGGRE 525
            L+  LG  P ++ L  + +  G  N  F IY++             E D  L IK A       GE       R R E       G  +P +VPR F  +        E  + V+E L     + ++ R+G   G       ++  +G  LG+   T+ ++S Y  E    ++L + F N E     ER  F  P             G  T +F  EELR  V+K   +  V      L + +    E L+H D+H  +I   +                        K++D E   +GP G DVG F+ANL     + +G  RE
Sbjct:   20 LAVKLGLFPSKSTLTCQEIGDGNLNYVFHIYDQ-------------EHDKALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSD-------TEMAVTVMEDL----SHLKIARKGLIEG--ENYPHLSRHIGEFLGK---TLFYSSDYALEPKVKKQLVKQFTNPELCDITERLVFTDPFF-----------GHDTNDF-EEELRPFVEKLWNNDNVKIEAAKLKKSFLTSAETLIHGDLHTGSIFASE---------------------HETKVIDPEFAFYGPIGFDVGQFIANLFLNALSRDGADRE 283
[Close]
BLAST of NO01G04540 vs. NCBI_GenBank
Match: WP_080487985.1 (S-methyl-5-thioribose kinase [Bacillus subtilis])

HSP 1 Score: 66.2 bits (160), Expect = 3.400e-7
Identity = 82/326 (25.15%), Postives = 123/326 (37.73%), Query Frame = 0 
Query:  205 LSTVLGHIPEEN-LDIRLLYSGQTNQAFRIYEKRNKRTPSSDGNNDEVDDVLFIKYAPDVVGDDGEVVMRKGGRTRTEWEGYREMGRVMPGMVPRTFVLEGGEEEGGGEGGLMVVEFLREYIPYAELLRRGQSGGGERGGQGVAVQVGRLLGRYHGTVMWNSAYVRE----EELWRTFENEEHIRFWER-SFARPLLGLLRGGGEEEGGGLTKEFLGEELREIVKKDGGDRGVVWAVETLCREYKGRKEALVHADMHAMNILIKQGGRXXXXXXXXXXXXXXXXXXXXXKIVDAEKTMWGPAGLDVGMFLANLAFYMATEEGGGRE 525
            L+  LG  P ++ L  + +  G  N  F IY++             E D  L IK A       GE       R R E       G  +P +VPR F  +        E  + V+E L     + ++ R+G   G       ++  +G  LG+   T+ ++S Y  E    ++L + F N E     ER  F  P             G  T +F  EELR  V+K   +  V      L + +    E L+H D+H  +I   +                        K++D E   +GP G DVG F+ANL     + +G  RE
Sbjct:   22 LAVKLGLFPSKSTLTCQEIGDGNLNYVFHIYDQ-------------EHDKALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSD-------TEMAVTVMEDL----SHLKIARKGLIEG--ENYPHLSRHIGEFLGK---TLFYSSDYALEPKVKKQLVKQFTNPELCDITERLVFTDPFF-----------GHDTNDF-EEELRPFVEKLWNNDNVKIEAAKLKKSFLTSAETLIHGDLHTGSIFASE---------------------HETKVIDPEFAFYGPIGFDVGQFIANLFLNALSRDGADRE 285
[Close]
BLAST of NO01G04540 vs. NCBI_GenBank
Match: KXJ36093.1 (methylthioribose kinase [Bacillus subtilis] >APH68252.1 S-methyl-5-thioribose kinase [Bacillus subtilis])

HSP 1 Score: 65.9 bits (159), Expect = 4.500e-7
Identity = 82/326 (25.15%), Postives = 123/326 (37.73%), Query Frame = 0 
Query:  205 LSTVLGHIPEEN-LDIRLLYSGQTNQAFRIYEKRNKRTPSSDGNNDEVDDVLFIKYAPDVVGDDGEVVMRKGGRTRTEWEGYREMGRVMPGMVPRTFVLEGGEEEGGGEGGLMVVEFLREYIPYAELLRRGQSGGGERGGQGVAVQVGRLLGRYHGTVMWNSAYVRE----EELWRTFENEEHIRFWER-SFARPLLGLLRGGGEEEGGGLTKEFLGEELREIVKKDGGDRGVVWAVETLCREYKGRKEALVHADMHAMNILIKQGGRXXXXXXXXXXXXXXXXXXXXXKIVDAEKTMWGPAGLDVGMFLANLAFYMATEEGGGRE 525
            L+  LG  P ++ L  + +  G  N  F IY++             E D  L IK A       GE       R R E       G  +P +VPR F  +        E  + V+E L     + +++R+G   G       ++  +G  LG+   T+ ++S Y  E    ++L + F N E     ER  F  P                T +F  EELR  V+K   +  V      L + +    E L+H D+H  +I   +                        K++D E   +GP G DVG F+ANL       +GG RE
Sbjct:   20 LAVKLGLFPSKSTLTCQEIGDGNLNYVFHIYDQ-------------EHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSD-------TEMAVTVMEDL----SHLKIVRKGLIEGEHY--SHLSQHIGEFLGK---TLFYSSDYALEPKVKKQLVKQFTNPELCDITERLVFTDPFF-----------DHDTNDF-EEELRPFVEKLWNNDNVKIEAAKLKKSFLTSAETLIHGDLHTGSIFASE---------------------HETKVIDPEFAFYGPIGFDVGQFIANLFLNALGRDGGDRE 283
[Close]
BLAST of NO01G04540 vs. NCBI_GenBank
Match: WP_072566836.1 (S-methyl-5-thioribose kinase [Bacillus subtilis])

HSP 1 Score: 65.9 bits (159), Expect = 4.500e-7
Identity = 82/326 (25.15%), Postives = 123/326 (37.73%), Query Frame = 0 
Query:  205 LSTVLGHIPEEN-LDIRLLYSGQTNQAFRIYEKRNKRTPSSDGNNDEVDDVLFIKYAPDVVGDDGEVVMRKGGRTRTEWEGYREMGRVMPGMVPRTFVLEGGEEEGGGEGGLMVVEFLREYIPYAELLRRGQSGGGERGGQGVAVQVGRLLGRYHGTVMWNSAYVRE----EELWRTFENEEHIRFWER-SFARPLLGLLRGGGEEEGGGLTKEFLGEELREIVKKDGGDRGVVWAVETLCREYKGRKEALVHADMHAMNILIKQGGRXXXXXXXXXXXXXXXXXXXXXKIVDAEKTMWGPAGLDVGMFLANLAFYMATEEGGGRE 525
            L+  LG  P ++ L  + +  G  N  F IY++             E D  L IK A       GE       R R E       G  +P +VPR F  +        E  + V+E L     + +++R+G   G       ++  +G  LG+   T+ ++S Y  E    ++L + F N E     ER  F  P                T +F  EELR  V+K   +  V      L + +    E L+H D+H  +I   +                        K++D E   +GP G DVG F+ANL       +GG RE
Sbjct:   22 LAVKLGLFPSKSTLTCQEIGDGNLNYVFHIYDQ-------------EHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSD-------TEMAVTVMEDL----SHLKIVRKGLIEGEHY--SHLSQHIGEFLGK---TLFYSSDYALEPKVKKQLVKQFTNPELCDITERLVFTDPFF-----------DHDTNDF-EEELRPFVEKLWNNDNVKIEAAKLKKSFLTSAETLIHGDLHTGSIFASE---------------------HETKVIDPEFAFYGPIGFDVGQFIANLFLNALGRDGGDRE 285
[Close]
BLAST of NO01G04540 vs. NCBI_GenBank
Match: WP_014471733.1 (S-methyl-5-thioribose kinase [Bacillus amyloliquefaciens] >AEB62999.1 methylthioribose kinase (methionine salvage pathway) [Bacillus amyloliquefaciens LL3])

HSP 1 Score: 65.1 bits (157), Expect = 7.600e-7
Identity = 75/319 (23.51%), Postives = 125/319 (39.18%), Query Frame = 0 
Query:  214 EENLDIRLLYSGQTNQAFRIYEKRNKRTPSSDGNNDEVDDVLFIKYA---PDVVGDDGEVVMRKGGRTRTEWEGYREMGRVMPGMVPRTFVLEGGEEEGGGEGGLMVVEFLREYIPYAELLRRGQSGGGERGGQGVAVQVGRLLGRYHGTVMWNSAYVRE----EELWRTFENEEHIRFWER-SFARPLLGLLRGGGEEEGGGLTKEFLGEELREIVKKDGGDRGVVWAVETLCREYKGRKEALVHADMHAMNILIKQGGRXXXXXXXXXXXXXXXXXXXXXKIVDAEKTMWGPAGLDVGMFLANLAFYMATEEGGGRE 525
            +  L  R +  G  N  F +Y+K NK+              L IK A     VVG+   + +    R R E       G  +P +VP  +  +        E  + V+E L     + ++ R+G + G  +    ++  +G  LG+   T+ ++SAY  +    ++L + F N E     ER  F  P L       + E    T +F  EELR   +K   +  +    + L   +    E L+H D+H  +I   +                        K++D E   +GP G D+G F+ANL     + +G  R+
Sbjct:   30 KSTLTCREIGDGNLNYVFHVYDKENKKG-------------LIIKQAIPYAKVVGESWPLTI---DRARIESSALIRQGEHVPHLVPAVYYSD-------TEMAVTVMEDL----SHLKISRKGLAEG--KHYPNLSAHIGEFLGK---TLFYSSAYALDAKVKQQLAKQFTNPELCNITERLVFTEPFL-------DHE----TNDF-EEELRPYAEKIWNNSRLKEGADELKAIFLNSAETLIHGDLHTGSIFADE---------------------HETKVIDPEFAFFGPIGFDIGQFIANLLLNALSRDGDDRQ 283
[Close]
BLAST of NO01G04540 vs. NCBI_GenBank
Match: KIN43586.1 (5-methylthioribose kinase [Bacillus subtilis])

HSP 1 Score: 65.1 bits (157), Expect = 7.600e-7
Identity = 81/326 (24.85%), Postives = 123/326 (37.73%), Query Frame = 0 
Query:  205 LSTVLGHIPEEN-LDIRLLYSGQTNQAFRIYEKRNKRTPSSDGNNDEVDDVLFIKYAPDVVGDDGEVVMRKGGRTRTEWEGYREMGRVMPGMVPRTFVLEGGEEEGGGEGGLMVVEFLREYIPYAELLRRGQSGGGERGGQGVAVQVGRLLGRYHGTVMWNSAYVRE----EELWRTFENEEHIRFWER-SFARPLLGLLRGGGEEEGGGLTKEFLGEELREIVKKDGGDRGVVWAVETLCREYKGRKEALVHADMHAMNILIKQGGRXXXXXXXXXXXXXXXXXXXXXKIVDAEKTMWGPAGLDVGMFLANLAFYMATEEGGGRE 525
            L+ +LG  P ++ L  + +  G  N  F IY++             E D  L IK A       GE       R R E       G  +P +VPR F  +        E  + V+E L     + ++ R+G   G       ++  +G  LG+   T+ ++S Y  E    ++L + F N E     ER  F  P                T +F  EELR  V+K   +  V      L + +    E L+H D+H  +I   +                        K++D E   +GP G DVG F+ANL     + +G  RE
Sbjct:   21 LAVMLGLFPSKSTLTCQEIGDGNLNYVFHIYDQ-------------EHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSD-------TEMAVTVMEDL----SHLKIARKGLIKG--ENYPHLSQHIGEFLGK---TLFYSSDYALEPKVKKQLVKQFTNPELCDITERLVFTDPFF-----------DHDTNDF-EEELRPFVEKLWNNDSVKIGAAKLKKSFLTSAETLIHGDLHTGSIFASE---------------------HETKVIDPEFAFYGPIGFDVGQFIANLFLNALSRDGADRE 284
[Close]
BLAST of NO01G04540 vs. NCBI_GenBank
Match: CUB42830.1 (Methylthioribose kinase [Bacillus subtilis] >CUB24959.1 Methylthioribose kinase [Bacillus cereus])

HSP 1 Score: 65.1 bits (157), Expect = 7.600e-7
Identity = 82/326 (25.15%), Postives = 123/326 (37.73%), Query Frame = 0 
Query:  205 LSTVLGHIPEEN-LDIRLLYSGQTNQAFRIYEKRNKRTPSSDGNNDEVDDVLFIKYAPDVVGDDGEVVMRKGGRTRTEWEGYREMGRVMPGMVPRTFVLEGGEEEGGGEGGLMVVEFLREYIPYAELLRRGQSGGGERGGQGVAVQVGRLLGRYHGTVMWNSAYVRE----EELWRTFENEEHIRFWER-SFARPLLGLLRGGGEEEGGGLTKEFLGEELREIVKKDGGDRGVVWAVETLCREYKGRKEALVHADMHAMNILIKQGGRXXXXXXXXXXXXXXXXXXXXXKIVDAEKTMWGPAGLDVGMFLANLAFYMATEEGGGRE 525
            L+  LG  P ++ L  + +  G  N  F IY++             E D  L IK A       GE       R R E       G  +P +VPR F  +        E  + V+E L     + +++R+G   G       ++  +G  LG+   T+ ++S Y  E    ++L + F N E     ER  F  P                T +F  EELR  V+K   +  V      L + +    E L+H D+H  +I   +                        K++D E   +GP G DVG F+ANL       +GG RE
Sbjct:   20 LAVRLGLFPSKSTLTCQEIGDGNLNYVFHIYDQ-------------EHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSD-------TEMAVTVMEDL----SHLKIVRKGLIEGEHY--PHLSQHIGEFLGK---TLFYSSDYALEPKVKKQLVKQFTNPELCDITERLVFTDPFF-----------DHDTNDF-EEELRPFVEKLWNNDNVKIEAAKLKKSFLTSAETLIHGDLHTGSIFASE---------------------HETKVIDPEFAFYGPIGFDVGQFIANLFLNALGRDGGDRE 283
[Close]
BLAST of NO01G04540 vs. NCBI_GenBank
Match: WP_072183223.1 (S-methyl-5-thioribose kinase [Bacillus subtilis] >OWV37779.1 S-methyl-5-thioribose kinase [Bacillus subtilis])

HSP 1 Score: 65.1 bits (157), Expect = 7.600e-7
Identity = 82/326 (25.15%), Postives = 123/326 (37.73%), Query Frame = 0 
Query:  205 LSTVLGHIPEEN-LDIRLLYSGQTNQAFRIYEKRNKRTPSSDGNNDEVDDVLFIKYAPDVVGDDGEVVMRKGGRTRTEWEGYREMGRVMPGMVPRTFVLEGGEEEGGGEGGLMVVEFLREYIPYAELLRRGQSGGGERGGQGVAVQVGRLLGRYHGTVMWNSAYVRE----EELWRTFENEEHIRFWER-SFARPLLGLLRGGGEEEGGGLTKEFLGEELREIVKKDGGDRGVVWAVETLCREYKGRKEALVHADMHAMNILIKQGGRXXXXXXXXXXXXXXXXXXXXXKIVDAEKTMWGPAGLDVGMFLANLAFYMATEEGGGRE 525
            L+  LG  P ++ L  + +  G  N  F IY++             E D  L IK A       GE       R R E       G  +P +VPR F  +        E  + V+E L     + +++R+G   G       ++  +G  LG+   T+ ++S Y  E    ++L + F N E     ER  F  P                T +F  EELR  V+K   +  V      L + +    E L+H D+H  +I   +                        K++D E   +GP G DVG F+ANL       +GG RE
Sbjct:   22 LAVRLGLFPSKSTLTCQEIGDGNLNYVFHIYDQ-------------EHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSD-------TEMAVTVMEDL----SHLKIVRKGLIEGEHY--PHLSQHIGEFLGK---TLFYSSDYALEPKVKKQLVKQFTNPELCDITERLVFTDPFF-----------DHDTNDF-EEELRPFVEKLWNNDNVKIEAAKLKKSFLTSAETLIHGDLHTGSIFASE---------------------HETKVIDPEFAFYGPIGFDVGQFIANLFLNALGRDGGDRE 285
The following BLAST results are available for this feature:
BLAST of NO01G04540 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 14
Match NameE-valueIdentityDescription
SCV40761.11.500e-725.465-methylthioribose kinase [Bacillus subtilis][more]
WP_087987169.11.500e-725.46S-methyl-5-thioribose kinase [Bacillus subtilis] >... [more]
OIS67335.13.400e-725.15S-methyl-5-thioribose kinase [Bacillus subtilis] >... [more]
WP_080487985.13.400e-725.15S-methyl-5-thioribose kinase [Bacillus subtilis][more]
KXJ36093.14.500e-725.15methylthioribose kinase [Bacillus subtilis] >APH68... [more]
WP_072566836.14.500e-725.15S-methyl-5-thioribose kinase [Bacillus subtilis][more]
WP_014471733.17.600e-723.51S-methyl-5-thioribose kinase [Bacillus amyloliquef... [more]
KIN43586.17.600e-724.855-methylthioribose kinase [Bacillus subtilis][more]
CUB42830.17.600e-725.15Methylthioribose kinase [Bacillus subtilis] >CUB24... [more]
WP_072183223.17.600e-725.15S-methyl-5-thioribose kinase [Bacillus subtilis] >... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL005nonsL005Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR047ncniR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR091ngnoR091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G04540.1NO01G04540.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G04540.1NO01G04540.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G04540 ID=NO01G04540|Name=NO01G04540|organism=Nannochloropsis oceanica|type=gene|length=1704bp
CAACAGGCTGGGACCTCCAAGCGGGCTCGATCGGCTGGCAAGGCATCTTC
ATAATCGCACGGGCGCCTTCTGCGGCTGCGTTCACGAACGTCCACAGCTG
CCGTCATGGCCATTTCTCGACCGCGTGGCCTGGGCCGCAACGGCAGCATT
TTCCTGCTGCTAATGTCGGCGCTAGTAAGCTTTGTCTTATCCTGGACCTT
CCCTTTTGCCCAGGCTTTTGTGGCCCGGCTGCCGACGCTTACTGGTGTGG
TCCGTCAGCAGGTGCCACTGACATGTTCCTTGTCCTGCTTGAGTCTCGAC
TGCCGCCATAGCAGCACCAGCAGCACAAGTACCAGTGTTGGATTTTGCAC
AAGCTCGTTTCATTTGCTTATTGCTCGCCATAGCTGTCGTCGTCGAAGCC
AGCGTCTGTGGTCGGCTGCGTCGGATGGAGAGGAAGGAACGTCAGCAGAG
AGCAATGCGGGAGGACAGAGTAGCAATGGGGGGGAAGGGGAAGAGACGCT
GGAGGCATCTGATATGGTGGACTACAATTCCTTCGCCACCCCCTTGTGGT
CATCTCCTTCGTCCTCTTCCTCCTCATTGTTCTTATCTTCTTCATCGTTC
CCTTCCTCCTTCTCCACCCCCTACTTCTCCCCGCCTCCCACCCCCCCTAC
CGACCCTATCCAACAACTCCAACAACGTATCCTTCAGAAAGCCCTAAAAT
GGCGCCGTGAGGGGCCTCTATCTACAGTCTTAGGCCACATACCCGAAGAG
AATCTCGACATCCGCCTTCTCTACTCAGGACAAACCAATCAAGCCTTCAG
AATCTACGAAAAGAGAAATAAACGCACGCCTTCCTCCGATGGTAATAACG
ACGAGGTAGACGATGTTTTATTTATAAAGTACGCCCCTGACGTGGTCGGT
GATGATGGGGAGGTGGTAATGAGGAAGGGGGGGAGGACGAGGACTGAATG
GGAAGGATACCGGGAGATGGGGCGGGTGATGCCTGGAATGGTGCCTCGAA
CATTTGTCCTTGAGGGAGGGGAGGAAGAGGGAGGAGGGGAGGGAGGATTG
ATGGTGGTGGAATTTCTAAGGGAGTATATTCCGTATGCGGAACTTTTGAG
GAGGGGGCAGTCGGGAGGGGGGGAGAGGGGTGGGCAGGGGGTGGCGGTAC
AGGTGGGAAGGTTGCTGGGGAGGTACCACGGGACGGTGATGTGGAATAGC
GCGTATGTGAGGGAAGAGGAGCTTTGGCGAACATTTGAAAATGAGGAGCA
TATTCGGTTTTGGGAGCGGTCGTTCGCGCGGCCTTTGCTGGGGCTGTTGA
GAGGAGGAGGGGAGGAGGAAGGGGGGGGTTTGACCAAGGAATTTTTGGGG
GAAGAACTGAGGGAGATCGTGAAGAAGGACGGGGGGGATAGAGGGGTGGT
GTGGGCAGTAGAGACGCTTTGTAGGGAGTATAAAGGGAGGAAAGAAGCGT
TGGTTCATGCAGATATGCACGCGATGAATATCTTGATAAAGCAGGGAGGA
AGGCAAGAAGGGAGGGAGGGAGCAGCGATAGGAGCAGCAGCAGCAGCAGC
AGCGACTGCAACGGTCAAAATCGTTGATGCCGAGAAGACTATGTGGGGTC
CCGCTGGTTTAGATGTTGGAATGTTCCTCGCGAACCTGGCGTTTTATATG
GCGACAGAGGAGGGGGGGGGGAGGGAGGACGAGGACGTGGGTGGGGGGAG
GTGA
back to top

protein sequence of NO01G04540.1

>NO01G04540.1-protein ID=NO01G04540.1-protein|Name=NO01G04540.1|organism=Nannochloropsis oceanica|type=polypeptide|length=533bp
MAISRPRGLGRNGSIFLLLMSALVSFVLSWTFPFAQAFVARLPTLTGVVR
QQVPLTCSLSCLSLDCRHSSTSSTSTSVGFCTSSFHLLIARHSCRRRSQR
LWSAASDGEEGTSAESNAGGQSSNGGEGEETLEASDMVDYNSFATPLWSS
PSSSSSSLFLSSSSFPSSFSTPYFSPPPTPPTDPIQQLQQRILQKALKWR
REGPLSTVLGHIPEENLDIRLLYSGQTNQAFRIYEKRNKRTPSSDGNNDE
VDDVLFIKYAPDVVGDDGEVVMRKGGRTRTEWEGYREMGRVMPGMVPRTF
VLEGGEEEGGGEGGLMVVEFLREYIPYAELLRRGQSGGGERGGQGVAVQV
GRLLGRYHGTVMWNSAYVREEELWRTFENEEHIRFWERSFARPLLGLLRG
GGEEEGGGLTKEFLGEELREIVKKDGGDRGVVWAVETLCREYKGRKEALV
HADMHAMNILIKQGGRQEGREGAAIGAAAAAAATATVKIVDAEKTMWGPA
GLDVGMFLANLAFYMATEEGGGREDEDVGGGR*
back to top
Synonyms
Publications