NO01G04390, NO01G04390 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G04390 vs. NCBI_GenBank
Match: XP_008881215.1 (hypothetical protein H310_15013 [Aphanomyces invadans] >ETV90153.1 hypothetical protein H310_15013 [Aphanomyces invadans]) HSP 1 Score: 116.3 bits (290), Expect = 3.700e-22 Identity = 97/344 (28.20%), Postives = 162/344 (47.09%), Query Frame = 0 Query: 287 YKCAPCDKAFQTESQHAAHISAHEECHYPTCTFQGSRQVVGGHYRVAHGKYRGNGFRVLKVEGRSFRILVGNAPEEVEQWREDRRKNFPTAENVAKRRMEMRGGR--GGREGGGKKRPRAEEVDEGRGGSKQARAECGGGLLGFGEAYASEGQGEQEVLGNEEIPTVVRTAVEKEADVAMRTSLLYGVCRAYLRNQCPLSAARCRYRHG----PTKGGGGLMYCRFYTKPGGGCHHGEGCQFVHDQSLKEELERWVVERRAQKKEEREAEVAEGEMECGTKRPGKTIKXXXXXXXXXXXXXXXXXXGPSRELTLLKRLLGMEVEKETNLVLGCIRYLVEENFFK 625 ++C PC+K F +SQ+ AH+ HE+C P C F S++VV HY+V HG+Y G+G + ++VEG+ F++LVGN+PEE+ +WRE+RRK +P+ NV KR+ E G R G KK + + G+ + A G E A+ + L + E+ + K A ++S C ++RN C +C + H P K +F K G C G C+F H + +++L+ + + Q ++E+ ++V + +LL++LL +++KE +L R+LVE +FF+ Sbjct: 232 WQCEPCEKHFAMKSQYDAHMLTHEQCWAPGCDFSASKRVVTSHYQVMHGQYAGSGLKEIEVEGQKFQVLVGNSPEEITKWREERRKKWPSESNV-KRKNEQMGERVQAGDIPANKKLKTSPALPGPTDGTTPSDATSGTAERPAAELNAATSAAQ---LPDNEVASPRSVHRAKPASSKKKSSKF---CVKFIRNGCD-DGDKCLFNHDIESIPCK--------QFLAK--GSCKRGTQCKFSHTVTAQDKLK----QLQLQHQKEQASQVKQ------------------------------------HRSSLLRKLLAKDIDKEHRHILQAFRHLVEHHFFQ 517
BLAST of NO01G04390 vs. NCBI_GenBank
Match: OQR91497.1 (hypothetical protein ACHHYP_04654 [Achlya hypogyna]) HSP 1 Score: 112.5 bits (280), Expect = 5.400e-21 Identity = 107/395 (27.09%), Postives = 156/395 (39.49%), Query Frame = 0 Query: 247 PF-GSPSIHPSALTMAAASQGG------------AEAEPVVAAVEEGEDAEGAYKCAPCDKAFQTESQHAAHISAHEECHYPTCTFQGSRQVVGGHYRVAHGKYRGNGFRVLKVEGRSFRILVGNAPEEVEQWREDRRKNFPTAENVAKRRMEMRGGRGGREGGGKKRPRAEEVDEGRGGSKQARAECGGGLLGFGEAYASEGQGEQEVLGNEEIPTVVRTAVEKEADVAMRTSLLYGVCRAYLRNQCPLSAARCRYRHGPTKGGGGLMYCRFYTKPGGGCHHGEGCQFVHDQSLKEELERWVVERRAQKKEEREAEVAEGEMECGTKRPGKTIKXXXXXXXXXXXXXXXXXXGPSRELTLLKRLLGMEVEKETNLVLGCIRYLVEENFFKNKTS 629 PF G S+ P++ + GG A A P + E Y C PCDK F +SQH AH++ HE C P C F+ ++VV H+ HG++ G+G + ++VEG+ F +LVGN+PEE+ +WRE+RRK +P+ V KR++E ++R A ++ E + V NE TA EK A C Y+RN C L C + H G + C+ + G C G C+F+H EA V G K KT + +LL +LL +V KE L+L R++VE NFF + + Sbjct: 148 PFSGGRSVPPTSYVCRKCNMGGHWIQDCLKKTGTASARPSAPKPAPVAEGEMQYHCEPCDKHFALKSQHEAHMNTHESCWEPGCDFRACKRVVTAHHATVHGQFAGSGLKEIEVEGQKFTVLVGNSPEEIAKWREERRKKWPSTA-VVKRKLEQT----------EERMLAGDIVE---------------------------SDAKRVKANE-----AATAGEKPASNQRPKKKSSKFCVKYIRNVCEL-GDNCSFNHDI-----GNVPCKSFVNK-GVCRRGTECRFLH---------------------SGEARVV------GPKPATKTAAAQV----------------KDLKTSLLSKLLEKDVAKEHRLILQAFRFIVEHNFFASSNA 449
BLAST of NO01G04390 vs. NCBI_GenBank
Match: XP_008609891.1 (hypothetical protein SDRG_05924 [Saprolegnia diclina VS20] >EQC36470.1 hypothetical protein SDRG_05924 [Saprolegnia diclina VS20]) HSP 1 Score: 109.8 bits (273), Expect = 3.500e-20 Identity = 46/100 (46.00%), Postives = 71/100 (71.00%), Query Frame = 0 Query: 287 YKCAPCDKAFQTESQHAAHISAHEECHYPTCTFQGSRQVVGGHYRVAHGKYRGNGFRVLKVEGRSFRILVGNAPEEVEQWREDRRKNFPTAENVAKRRME 387 + C PC+K F SQH AH++ HE C P C F ++VV HY+ +HG++ G+G + ++VEG+ F +LVGN+PEE+ +WRE+RRK +P ++ V KR++E Sbjct: 323 FHCEPCEKHFALASQHEAHMNTHESCWAPDCDFSACKRVVTAHYQTSHGQFAGSGLKEIEVEGQKFNVLVGNSPEEIAKWREERRKKWP-SDAVVKRKLE 421
BLAST of NO01G04390 vs. NCBI_GenBank
Match: XP_009841362.1 (hypothetical protein, variant [Aphanomyces astaci] >ETV69109.1 hypothetical protein, variant [Aphanomyces astaci]) HSP 1 Score: 108.2 bits (269), Expect = 1.000e-19 Identity = 45/105 (42.86%), Postives = 72/105 (68.57%), Query Frame = 0 Query: 279 EGEDAEGAYKCAPCDKAFQTESQHAAHISAHEECHYPTCTFQGSRQVVGGHYRVAHGKYRGNGFRVLKVEGRSFRILVGNAPEEVEQWREDRRKNFPTAENVAKR 384 + + + G + C PC+K F +SQ AH+ HE C P C F S++VV H++ AHG+Y G+G + ++VEG+ F +LVGN+PE++ +WRE+RRK +P+ NV ++ Sbjct: 222 KSQQSHGDWHCEPCEKHFAMKSQFDAHVLTHEACWAPGCDFSASKRVVTSHHQTAHGQYAGSGLKEIEVEGQKFHVLVGNSPEDITKWREERRKKWPSDANVKRK 326
BLAST of NO01G04390 vs. NCBI_GenBank
Match: GAY03335.1 (Hypothetical protein PINS_011156 [Pythium insidiosum]) HSP 1 Score: 108.2 bits (269), Expect = 1.000e-19 Identity = 43/90 (47.78%), Postives = 66/90 (73.33%), Query Frame = 0 Query: 287 YKCAPCDKAFQTESQHAAHISAHEECHYPTCTFQGSRQVVGGHYRVAHGKYRGNGFRVLKVEGRSFRILVGNAPEEVEQWREDRRKNFPT 377 + C PCDK F ESQHAAH+ H C P C+F S++VV H++ +HG++ G+G + ++VEG+ F +LVGN+PE++E+WR +RRK +P+ Sbjct: 3 WHCEPCDKTFPIESQHAAHLKTHVSCPAPDCSFSASKRVVTVHHQTSHGQFAGSGLKEIEVEGQRFMVLVGNSPEDIEKWRAERRKRWPS 92
BLAST of NO01G04390 vs. NCBI_GenBank
Match: XP_009841361.1 (hypothetical protein H257_15078 [Aphanomyces astaci] >ETV69108.1 hypothetical protein H257_15078 [Aphanomyces astaci]) HSP 1 Score: 106.3 bits (264), Expect = 3.800e-19 Identity = 94/354 (26.55%), Postives = 153/354 (43.22%), Query Frame = 0 Query: 279 EGEDAEGAYKCAPCDKAFQTESQHAAHISAHEECHYPTCTFQGSRQVVGGHYRVAHGKYRGNGFRVLKVEGRSFRILVGNAPEEVEQWREDRRKNFPTAENVAKRRMEMRGGRGGREGGGKKRPRAEEVDEGRGGSKQARAECGGGLLGF--------GEAYASEGQGEQEVLGNEEIPTVVRTAVEKEADVAMRTSLLYGVCRAYLRNQCPLSAARCRYRHGPTKGGGGLMYCRFYTKPGGGCHHGEGCQFVHDQSLKEELERWVVERRAQKKEEREAEVAEGEMECGTKRPGKTIKXXXXXXXXXXXXXXXXXXGPSRELTLLKRLLGMEVEKETNLVLGCIRYLVEENFFK 625 + + + G + C PC+K F +SQ AH+ HE C P C F S++VV H++ AHG+Y G+G + ++VEG+ F +LVGN+PE++ +WRE+RRK +P+ NV KR+ + + R +A +V SK+ + + G ++ N PT T+ K V ++S C ++RN C A C + H + C+ + G C G+ C F H +L AQ K +++ K +K + +LL++LL +++KE +L RYLVE FF+ Sbjct: 222 KSQQSHGDWHCEPCEKHFAMKSQFDAHVLTHEACWAPGCDFSASKRVVTSHHQTAHGQYAGSGLKEIEVEGQKFHVLVGNSPEDITKWREERRKKWPSDANV-KRKNDQH----------QDRVQAGDVTTASPSSKRQKKTPTDNSIPIKVDITHKPPHEPTDAWSGIDSIVDN---PTTA-TSPAKTPAVKKKSSKF---CVKFIRNACE-DGANCLFNHDIES-----IPCKQFVAK-GTCKRGDECNFAHTGALS----------TAQDKAKQQY----------LKLQATQVK--------------------EHKSSLLRKLLAKDIDKEHRHILQAFRYLVEHQFFQ 510
BLAST of NO01G04390 vs. NCBI_GenBank
Match: OQS07511.1 (hypothetical protein THRCLA_00482 [Thraustotheca clavata]) HSP 1 Score: 103.2 bits (256), Expect = 3.200e-18 Identity = 68/206 (33.01%), Postives = 106/206 (51.46%), Query Frame = 0 Query: 287 YKCAPCDKAFQTESQHAAHISAHEECHYPTCTFQGSRQVVGGHYRVAHGKYRGNGFRVLKVEGRSFRILVGNAPEEVEQWREDRRKNFPTAENVAKRRMEMRGGRGGREGGGKKRPRAEEVDEGRGGSKQARAECGGGLLGFGEAYASEGQGEQEVLGNEEIPTVVRTAVEKEADVAMRTSLLYGVCRAYLRNQCPLSAARCRYRH 493 + C PCDK F +SQ+ AH++ HE C P C F ++VV H++ HG++ G+G + + VEG+ F +LVGN+PE++ +WRE+RRK +P+ +V KR+ME R G P + V S Q + S GQ E +V N + V+ + +K + + S + C Y+RN+C L C + H Sbjct: 667 FHCEPCDKHFPYKSQYDAHLNTHESCWEPNCDFSACKRVVTSHHQTVHGQFAGSGLKEIDVEGQKFTVLVGNSPEDIAKWREERRKKWPST-SVVKRKMEENEER--IRAGDVVEPALKRVKTTDENSTQV------------DPKESHGQVENDVATN---ASQVKNSPDKRTN---KKSTKF--CVKYIRNECKL-GDECHFNH 848
BLAST of NO01G04390 vs. NCBI_GenBank
Match: XP_012208629.1 (hypothetical protein SPRG_13416 [Saprolegnia parasitica CBS 223.65] >KDO20664.1 hypothetical protein SPRG_13416 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 102.8 bits (255), Expect = 4.200e-18 Identity = 53/143 (37.06%), Postives = 87/143 (60.84%), Query Frame = 0 Query: 287 YKCAPCDKAFQTESQHAAHISAHEECHYPTCTFQGSRQVVGGHYRVAHGKYRGNGFRVLKVEGRSFRILVGNAPEEVEQWREDRRKNFPTAENVAKRRME-----MRGGRGGREGGGKKRP---RAEEVDEGRGGSKQARAEC 422 + C PC+K F SQH AH++ HE C P C F ++VV HY+ +HG++ G+G + ++VEG+ F +LVGN+PEE+ +WRE+RRK +P ++ V KR++E ++ G + +P +A+ D G+K++ C Sbjct: 324 FHCEPCEKHFALASQHEAHMNTHESCWAPDCDFSACKRVVTAHYQTSHGQFAGSGLKEIEVEGQKFNVLVGNSPEEIAKWREERRKKWP-SDAVVKRKLEDNEERVQAGDVVAPAAKRAKPATEKAKSTDSPNNGTKKSSKFC 465
BLAST of NO01G04390 vs. NCBI_GenBank
Match: CBJ29302.1 (zinc finger protein [Ectocarpus siliculosus]) HSP 1 Score: 101.3 bits (251), Expect = 1.200e-17 Identity = 41/95 (43.16%), Postives = 64/95 (67.37%), Query Frame = 0 Query: 289 CAPCDKAFQTESQHAAHISAHEECHYPTCTFQGSRQVVGGHYRVAHGKYRGNGFRVLKVEGRSFRILVGNAPEEVEQWREDRRKNFPTAENVAKR 384 C PC+K F TE+ AH+ +H C C F R++V H+ HG++ G+GF+++ VEG+ FR+L+G +P+EV +WR +RRK +PT EN A++ Sbjct: 76 CEPCEKEFTTEAARQAHLQSHVPCPEKGCGFSALRKIVNNHHEAKHGQFSGSGFQMIDVEGKKFRVLLGTSPDEVAEWRAERRKRWPTDENKARK 170
BLAST of NO01G04390 vs. NCBI_GenBank
Match: XP_024575848.1 (polyadenylation factor i yth1 (cpsf subunit) [Plasmopara halstedii] >CEG39479.1 polyadenylation factor i yth1 (cpsf subunit) [Plasmopara halstedii]) HSP 1 Score: 98.6 bits (244), Expect = 8.000e-17 Identity = 76/259 (29.34%), Postives = 123/259 (47.49%), Query Frame = 0 Query: 278 EEGEDAEGAYKCAPCDKAFQTESQHAAHISAHEECHYPTCTFQGSRQVVGGHYRVAHGKYRGNGFRVLKVEGRSFRILVGNAPEEVEQWREDRRKNFPTAENVAKRRMEMRGGRGGREGGGKKR---PRAEEVDEGRGGSKQARAECGGGLLGFGEAYASEGQGEQEVLGNEEIPTVVRTAVEKEADVA-----MRTSLLYGVCRAYLRNQCPLSAARCRYRHGPTKGGGGLMYCRFYTKPGGGCHHGEGCQFVHDQSL 529 +E E +KC C K+F SQ+ AH+S H C C F S++VVG H++ AHG+Y G G + ++VEG+ F +LVGN+ EE+ +WRE+RRKN+ E + R G GK++ E+++EG E + ++EV + T T+ E+ DV+ ++ S +C+ + R QC L+ +C++ H + G M + G C G C + HD ++ Sbjct: 391 QEFEVGMQVWKCETCVKSFNVVSQYEAHLSFHVTC--SNCDFTASKRVVGAHFQTAHGQYAGQGLKEIEVEGQKFMVLVGNSAEEIAKWREERRKNWLAMSK------EPKTNRTNTFGTGKRKLSISSDEDLEEG------------------------EIEEDEEVKAKIVLQTGTTTS-ERVVDVSQQEPFVKKSRKIILCKYFSRGQCRLNEKQCKFSHDRSLFGCRAMMYK------GSCIKGMYCPYSHDTTM 610 The following BLAST results are available for this feature:
BLAST of NO01G04390 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G04390 ID=NO01G04390|Name=NO01G04390|organism=Nannochloropsis oceanica|type=gene|length=2287bpback to top protein sequence of NO01G04390.1 >NO01G04390.1-protein ID=NO01G04390.1-protein|Name=NO01G04390.1|organism=Nannochloropsis oceanica|type=polypeptide|length=686bpback to top Synonyms
Publications
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