NO01G04310, NO01G04310 (gene) Nannochloropsis oceanica

Overview
NameNO01G04310
Unique NameNO01G04310
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2167
Alignment locationchr1:1152707..1154873 +

Link to JBrowse

Properties
Property NameValue
DescriptionRegulator of chromosome condensation (RCC1) family protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:1152707..1154873 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR009091RCC1/BLIP-II
IPR000408Reg_chr_condens
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Homology
BLAST of NO01G04310 vs. NCBI_GenBank
Match: KOF95816.1 (hypothetical protein OCBIM_22037142mg [Octopus bimaculoides])

HSP 1 Score: 169.5 bits (428), Expect = 2.900e-38
Identity = 108/312 (34.62%), Postives = 153/312 (49.04%), Query Frame = 0
Query:  119 LRCMQVACGRKHTLALMEGGYIMSWGVGYFGQLGHGDDLSCDRPRMVHLLDPPRLGGDHVVAIACGGLHSAVSTAGQSVYCFGFNRYGQVGQGQTSDKISTPRPVSMSMIGPARIRQLACGR--HHTSVLTDKGHVFSWGASSFGRLGL--PDPKKVVTLPTEVISFRACPLAALACGDFHVLALGMDGKVYAWGYGAEGQGGLGATLHLRTPRPVEGLEGQQVAQVACGAWWSMVVTRQGRLYSWGYGDGGWLGLEHASELPYVEPCQPVTKYGATCSFDSDFNAC-LPSLVTALAHLKVEKVVGGGGHTI 426
            ++ + V  G KH LAL   G + +WG G  G+LGHG  + CDRPRMV       L G  V+ IA GG HSA  TA   +Y +G  RYG++G G + D+    +P  + ++   R+  +ACG     T  +TD   V+SWG   +G+LG    D  KV   P ++ S ++  +  + CG    +AL   G VY WG G   + G G   H+R PR V  L+G++V  +ACG+   +  T  G +Y+WG  D G LG                         D   NA   P LVTAL   K+ +V  G  H++
Sbjct: 3876 IKKLAVNSGGKHCLALSAEGEVFTWGEGEDGKLGHGIKIPCDRPRMVE-----ALRGKEVIDIAAGGAHSACITASGELYTWGKGRYGRLGHGDSDDQ---TKPKLVEVLKDYRVIDVACGSGDAQTLCITDDDSVWSWGDGDYGKLGRGGSDGCKV---PIKIESLQSLGVIKVECGSQFSVALTQSGAVYTWGKGDYHRLGHGTDDHVRKPRRVSALQGKKVIDIACGSLHCVACTDTGEVYTWGDNDEGQLG-------------------------DGTTNAIQRPRLVTALQGTKINRVACGSAHSL 4151          
BLAST of NO01G04310 vs. NCBI_GenBank
Match: XP_014791307.1 (PREDICTED: E3 ubiquitin-protein ligase HERC2-like isoform X1 [Octopus bimaculoides])

HSP 1 Score: 169.5 bits (428), Expect = 2.900e-38
Identity = 108/312 (34.62%), Postives = 153/312 (49.04%), Query Frame = 0
Query:  119 LRCMQVACGRKHTLALMEGGYIMSWGVGYFGQLGHGDDLSCDRPRMVHLLDPPRLGGDHVVAIACGGLHSAVSTAGQSVYCFGFNRYGQVGQGQTSDKISTPRPVSMSMIGPARIRQLACGR--HHTSVLTDKGHVFSWGASSFGRLGL--PDPKKVVTLPTEVISFRACPLAALACGDFHVLALGMDGKVYAWGYGAEGQGGLGATLHLRTPRPVEGLEGQQVAQVACGAWWSMVVTRQGRLYSWGYGDGGWLGLEHASELPYVEPCQPVTKYGATCSFDSDFNAC-LPSLVTALAHLKVEKVVGGGGHTI 426
            ++ + V  G KH LAL   G + +WG G  G+LGHG  + CDRPRMV       L G  V+ IA GG HSA  TA   +Y +G  RYG++G G + D+    +P  + ++   R+  +ACG     T  +TD   V+SWG   +G+LG    D  KV   P ++ S ++  +  + CG    +AL   G VY WG G   + G G   H+R PR V  L+G++V  +ACG+   +  T  G +Y+WG  D G LG                         D   NA   P LVTAL   K+ +V  G  H++
Sbjct: 3868 IKKLAVNSGGKHCLALSAEGEVFTWGEGEDGKLGHGIKIPCDRPRMVE-----ALRGKEVIDIAAGGAHSACITASGELYTWGKGRYGRLGHGDSDDQ---TKPKLVEVLKDYRVIDVACGSGDAQTLCITDDDSVWSWGDGDYGKLGRGGSDGCKV---PIKIESLQSLGVIKVECGSQFSVALTQSGAVYTWGKGDYHRLGHGTDDHVRKPRRVSALQGKKVIDIACGSLHCVACTDTGEVYTWGDNDEGQLG-------------------------DGTTNAIQRPRLVTALQGTKINRVACGSAHSL 4143          
BLAST of NO01G04310 vs. NCBI_GenBank
Match: OWF38491.1 (E3 ubiquitin-protein ligase HERC2 [Mizuhopecten yessoensis])

HSP 1 Score: 168.7 bits (426), Expect = 4.900e-38
Identity = 109/312 (34.94%), Postives = 152/312 (48.72%), Query Frame = 0
Query:  119 LRCMQVACGRKHTLALMEGGYIMSWGVGYFGQLGHGDDLSCDRPRMVHLLDPPRLGGDHVVAIACGGLHSAVSTAGQSVYCFGFNRYGQVGQGQTSDKISTPRPVSMSMIGPARIRQLACGR--HHTSVLTDKGHVFSWGASSFGRLGL--PDPKKVVTLPTEVISFRACPLAALACGDFHVLALGMDGKVYAWGYGAEGQGGLGATLHLRTPRPVEGLEGQQVAQVACGAWWSMVVTRQGRLYSWGYGDGGWLGLEHASELPYVEPCQPVTKYGATCSFDSDFNAC-LPSLVTALAHLKVEKVVGGGGHTI 426
            ++ + V  G KH LAL   G + SWG G  G+LGHG+   CDRPR++       L G  VV IA GG HSA  T+   +Y +G  RYG++G G + D+   PRP  +  +   R+  +ACG     T  +TD  +V+SWG   +G+LG    D  KV   P ++ S +   +  + CG    +AL   G VY WG G   + G G   H+R PR V  L+G++V  VACG+   +  T  G +Y+WG  D G LG                         D   NA   P LV AL   K+ +V  G  H++
Sbjct: 4051 IKKLAVNSGGKHCLALSAEGEVYSWGEGEDGKLGHGNRSPCDRPRVIE-----SLRGKEVVDIAAGGAHSACITSSGELYSWGKGRYGRLGHGDSEDQ---PRPKLVEAMKTHRVIDMACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKV---PMKIDSLQGLGVMKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGTDDHVRRPRRVSALQGKKVIDVACGSLHCVACTDAGEVYTWGDNDEGQLG-------------------------DGTTNAIQRPRLVAALQGKKINRVACGSAHSL 4326          
BLAST of NO01G04310 vs. NCBI_GenBank
Match: XP_021378317.1 (E3 ubiquitin-protein ligase HERC2-like isoform X4 [Mizuhopecten yessoensis] >XP_021378318.1 E3 ubiquitin-protein ligase HERC2-like isoform X4 [Mizuhopecten yessoensis] >XP_021378321.1 E3 ubiquitin-protein ligase HERC2-like isoform X4 [Mizuhopecten yessoensis])

HSP 1 Score: 168.7 bits (426), Expect = 4.900e-38
Identity = 109/312 (34.94%), Postives = 152/312 (48.72%), Query Frame = 0
Query:  119 LRCMQVACGRKHTLALMEGGYIMSWGVGYFGQLGHGDDLSCDRPRMVHLLDPPRLGGDHVVAIACGGLHSAVSTAGQSVYCFGFNRYGQVGQGQTSDKISTPRPVSMSMIGPARIRQLACGR--HHTSVLTDKGHVFSWGASSFGRLGL--PDPKKVVTLPTEVISFRACPLAALACGDFHVLALGMDGKVYAWGYGAEGQGGLGATLHLRTPRPVEGLEGQQVAQVACGAWWSMVVTRQGRLYSWGYGDGGWLGLEHASELPYVEPCQPVTKYGATCSFDSDFNAC-LPSLVTALAHLKVEKVVGGGGHTI 426
            ++ + V  G KH LAL   G + SWG G  G+LGHG+   CDRPR++       L G  VV IA GG HSA  T+   +Y +G  RYG++G G + D+   PRP  +  +   R+  +ACG     T  +TD  +V+SWG   +G+LG    D  KV   P ++ S +   +  + CG    +AL   G VY WG G   + G G   H+R PR V  L+G++V  VACG+   +  T  G +Y+WG  D G LG                         D   NA   P LV AL   K+ +V  G  H++
Sbjct: 4065 IKKLAVNSGGKHCLALSAEGEVYSWGEGEDGKLGHGNRSPCDRPRVIE-----SLRGKEVVDIAAGGAHSACITSSGELYSWGKGRYGRLGHGDSEDQ---PRPKLVEAMKTHRVIDMACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKV---PMKIDSLQGLGVMKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGTDDHVRRPRRVSALQGKKVIDVACGSLHCVACTDAGEVYTWGDNDEGQLG-------------------------DGTTNAIQRPRLVAALQGKKINRVACGSAHSL 4340          
BLAST of NO01G04310 vs. NCBI_GenBank
Match: XP_021378314.1 (E3 ubiquitin-protein ligase HERC2-like isoform X1 [Mizuhopecten yessoensis])

HSP 1 Score: 168.7 bits (426), Expect = 4.900e-38
Identity = 109/312 (34.94%), Postives = 152/312 (48.72%), Query Frame = 0
Query:  119 LRCMQVACGRKHTLALMEGGYIMSWGVGYFGQLGHGDDLSCDRPRMVHLLDPPRLGGDHVVAIACGGLHSAVSTAGQSVYCFGFNRYGQVGQGQTSDKISTPRPVSMSMIGPARIRQLACGR--HHTSVLTDKGHVFSWGASSFGRLGL--PDPKKVVTLPTEVISFRACPLAALACGDFHVLALGMDGKVYAWGYGAEGQGGLGATLHLRTPRPVEGLEGQQVAQVACGAWWSMVVTRQGRLYSWGYGDGGWLGLEHASELPYVEPCQPVTKYGATCSFDSDFNAC-LPSLVTALAHLKVEKVVGGGGHTI 426
            ++ + V  G KH LAL   G + SWG G  G+LGHG+   CDRPR++       L G  VV IA GG HSA  T+   +Y +G  RYG++G G + D+   PRP  +  +   R+  +ACG     T  +TD  +V+SWG   +G+LG    D  KV   P ++ S +   +  + CG    +AL   G VY WG G   + G G   H+R PR V  L+G++V  VACG+   +  T  G +Y+WG  D G LG                         D   NA   P LV AL   K+ +V  G  H++
Sbjct: 4138 IKKLAVNSGGKHCLALSAEGEVYSWGEGEDGKLGHGNRSPCDRPRVIE-----SLRGKEVVDIAAGGAHSACITSSGELYSWGKGRYGRLGHGDSEDQ---PRPKLVEAMKTHRVIDMACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKV---PMKIDSLQGLGVMKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGTDDHVRRPRRVSALQGKKVIDVACGSLHCVACTDAGEVYTWGDNDEGQLG-------------------------DGTTNAIQRPRLVAALQGKKINRVACGSAHSL 4413          
BLAST of NO01G04310 vs. NCBI_GenBank
Match: XP_021378320.1 (E3 ubiquitin-protein ligase HERC2-like isoform X5 [Mizuhopecten yessoensis])

HSP 1 Score: 168.7 bits (426), Expect = 4.900e-38
Identity = 109/312 (34.94%), Postives = 152/312 (48.72%), Query Frame = 0
Query:  119 LRCMQVACGRKHTLALMEGGYIMSWGVGYFGQLGHGDDLSCDRPRMVHLLDPPRLGGDHVVAIACGGLHSAVSTAGQSVYCFGFNRYGQVGQGQTSDKISTPRPVSMSMIGPARIRQLACGR--HHTSVLTDKGHVFSWGASSFGRLGL--PDPKKVVTLPTEVISFRACPLAALACGDFHVLALGMDGKVYAWGYGAEGQGGLGATLHLRTPRPVEGLEGQQVAQVACGAWWSMVVTRQGRLYSWGYGDGGWLGLEHASELPYVEPCQPVTKYGATCSFDSDFNAC-LPSLVTALAHLKVEKVVGGGGHTI 426
            ++ + V  G KH LAL   G + SWG G  G+LGHG+   CDRPR++       L G  VV IA GG HSA  T+   +Y +G  RYG++G G + D+   PRP  +  +   R+  +ACG     T  +TD  +V+SWG   +G+LG    D  KV   P ++ S +   +  + CG    +AL   G VY WG G   + G G   H+R PR V  L+G++V  VACG+   +  T  G +Y+WG  D G LG                         D   NA   P LV AL   K+ +V  G  H++
Sbjct: 3980 IKKLAVNSGGKHCLALSAEGEVYSWGEGEDGKLGHGNRSPCDRPRVIE-----SLRGKEVVDIAAGGAHSACITSSGELYSWGKGRYGRLGHGDSEDQ---PRPKLVEAMKTHRVIDMACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKV---PMKIDSLQGLGVMKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGTDDHVRRPRRVSALQGKKVIDVACGSLHCVACTDAGEVYTWGDNDEGQLG-------------------------DGTTNAIQRPRLVAALQGKKINRVACGSAHSL 4255          
BLAST of NO01G04310 vs. NCBI_GenBank
Match: XP_021378315.1 (E3 ubiquitin-protein ligase HERC2-like isoform X2 [Mizuhopecten yessoensis])

HSP 1 Score: 168.7 bits (426), Expect = 4.900e-38
Identity = 109/312 (34.94%), Postives = 152/312 (48.72%), Query Frame = 0
Query:  119 LRCMQVACGRKHTLALMEGGYIMSWGVGYFGQLGHGDDLSCDRPRMVHLLDPPRLGGDHVVAIACGGLHSAVSTAGQSVYCFGFNRYGQVGQGQTSDKISTPRPVSMSMIGPARIRQLACGR--HHTSVLTDKGHVFSWGASSFGRLGL--PDPKKVVTLPTEVISFRACPLAALACGDFHVLALGMDGKVYAWGYGAEGQGGLGATLHLRTPRPVEGLEGQQVAQVACGAWWSMVVTRQGRLYSWGYGDGGWLGLEHASELPYVEPCQPVTKYGATCSFDSDFNAC-LPSLVTALAHLKVEKVVGGGGHTI 426
            ++ + V  G KH LAL   G + SWG G  G+LGHG+   CDRPR++       L G  VV IA GG HSA  T+   +Y +G  RYG++G G + D+   PRP  +  +   R+  +ACG     T  +TD  +V+SWG   +G+LG    D  KV   P ++ S +   +  + CG    +AL   G VY WG G   + G G   H+R PR V  L+G++V  VACG+   +  T  G +Y+WG  D G LG                         D   NA   P LV AL   K+ +V  G  H++
Sbjct: 4134 IKKLAVNSGGKHCLALSAEGEVYSWGEGEDGKLGHGNRSPCDRPRVIE-----SLRGKEVVDIAAGGAHSACITSSGELYSWGKGRYGRLGHGDSEDQ---PRPKLVEAMKTHRVIDMACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKV---PMKIDSLQGLGVMKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGTDDHVRRPRRVSALQGKKVIDVACGSLHCVACTDAGEVYTWGDNDEGQLG-------------------------DGTTNAIQRPRLVAALQGKKINRVACGSAHSL 4409          
BLAST of NO01G04310 vs. NCBI_GenBank
Match: XP_021378316.1 (E3 ubiquitin-protein ligase HERC2-like isoform X3 [Mizuhopecten yessoensis])

HSP 1 Score: 168.7 bits (426), Expect = 4.900e-38
Identity = 109/312 (34.94%), Postives = 152/312 (48.72%), Query Frame = 0
Query:  119 LRCMQVACGRKHTLALMEGGYIMSWGVGYFGQLGHGDDLSCDRPRMVHLLDPPRLGGDHVVAIACGGLHSAVSTAGQSVYCFGFNRYGQVGQGQTSDKISTPRPVSMSMIGPARIRQLACGR--HHTSVLTDKGHVFSWGASSFGRLGL--PDPKKVVTLPTEVISFRACPLAALACGDFHVLALGMDGKVYAWGYGAEGQGGLGATLHLRTPRPVEGLEGQQVAQVACGAWWSMVVTRQGRLYSWGYGDGGWLGLEHASELPYVEPCQPVTKYGATCSFDSDFNAC-LPSLVTALAHLKVEKVVGGGGHTI 426
            ++ + V  G KH LAL   G + SWG G  G+LGHG+   CDRPR++       L G  VV IA GG HSA  T+   +Y +G  RYG++G G + D+   PRP  +  +   R+  +ACG     T  +TD  +V+SWG   +G+LG    D  KV   P ++ S +   +  + CG    +AL   G VY WG G   + G G   H+R PR V  L+G++V  VACG+   +  T  G +Y+WG  D G LG                         D   NA   P LV AL   K+ +V  G  H++
Sbjct: 4132 IKKLAVNSGGKHCLALSAEGEVYSWGEGEDGKLGHGNRSPCDRPRVIE-----SLRGKEVVDIAAGGAHSACITSSGELYSWGKGRYGRLGHGDSEDQ---PRPKLVEAMKTHRVIDMACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKV---PMKIDSLQGLGVMKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGTDDHVRRPRRVSALQGKKVIDVACGSLHCVACTDAGEVYTWGDNDEGQLG-------------------------DGTTNAIQRPRLVAALQGKKINRVACGSAHSL 4407          
BLAST of NO01G04310 vs. NCBI_GenBank
Match: XP_001702277.1 (predicted protein [Chlamydomonas reinhardtii])

HSP 1 Score: 168.3 bits (425), Expect = 6.400e-38
Identity = 111/326 (34.05%), Postives = 168/326 (51.53%), Query Frame = 0
Query:   74 DGPVKDLSCGSTFTVAL-TTRGIPYQWG------ILNGRA----FPEPTRVSLGVPLRCMQVACGRKHTLALMEG-GYIMSWGVGYFGQLGHGDDLSCDRPRMVHLLDPPRLGGDHVVAIACGGLHSAVSTAGQSVYCFGFNRYGQVGQGQTSDKISTPRPVSMSMIGPARIRQLACGRHHTSVLTDKGHVFSWGASSFGRLGLPDPKKVVTLPTEVISFRACPLAALACGDFHVLALGMDGKVYAWGYGAEGQGGLGATLHLRTPRPVE--GLEG----------QQVAQVACGAWWSMVVTRQGRLYSWGYGDGGWLGLEHASE 376
            D  V  + CG+ +TVA+ ++RG  Y WG      + +G       P P     G P+   +VACG  HTL + +G G + ++G    GQLG G    C  P++V  L      G+ V ++ACG  HS  +T   +V+ +G+ RYG +G G + D+ +  R V +  +    +  + CG  H++V+TD+G VF++G S +G+LG  D     T P  V   + C ++ +A G  H +A   +G +YAWG+   GQ GLG +     P PV   GL G          ++VA +ACG   ++ VT  G +YSWG G  G LG  H +E
Sbjct:   61 DAGVDAVVCGAEYTVAVASSRGQIYSWGWGDFGRLGHGECGDVFVPRPIAFFSGRPV--ARVACGDTHTLVVTQGDGALYTFGRNQNGQLGLGHTNDCLSPQLVTALQ-----GERVSSVACGSEHSLAATEAGTVFSWGWGRYGNLGDGDSQDRYTPTRVVGLDGV---TVTSVVCGWRHSAVVTDEGRVFTFGWSKYGQLGHGDHVD-HTRPCLVAGLQHCRVSTVAGGWRHTMAADSEGNLYAWGWNKFGQLGLGDSEDRAAPTPVAGFGLAGGGVEAGAATPRRVALLACGWRHTVAVTEAGEVYSWGRGVNGQLG--HGAE 373          
BLAST of NO01G04310 vs. NCBI_GenBank
Match: AKS29686.1 (UV-B photoreceptor [Chlamydomonas reinhardtii] >PNW83310.1 hypothetical protein CHLRE_05g230600v5 [Chlamydomonas reinhardtii])

HSP 1 Score: 168.3 bits (425), Expect = 6.400e-38
Identity = 111/326 (34.05%), Postives = 168/326 (51.53%), Query Frame = 0
Query:   74 DGPVKDLSCGSTFTVAL-TTRGIPYQWG------ILNGRA----FPEPTRVSLGVPLRCMQVACGRKHTLALMEG-GYIMSWGVGYFGQLGHGDDLSCDRPRMVHLLDPPRLGGDHVVAIACGGLHSAVSTAGQSVYCFGFNRYGQVGQGQTSDKISTPRPVSMSMIGPARIRQLACGRHHTSVLTDKGHVFSWGASSFGRLGLPDPKKVVTLPTEVISFRACPLAALACGDFHVLALGMDGKVYAWGYGAEGQGGLGATLHLRTPRPVE--GLEG----------QQVAQVACGAWWSMVVTRQGRLYSWGYGDGGWLGLEHASE 376
            D  V  + CG+ +TVA+ ++RG  Y WG      + +G       P P     G P+   +VACG  HTL + +G G + ++G    GQLG G    C  P++V  L      G+ V ++ACG  HS  +T   +V+ +G+ RYG +G G + D+ +  R V +  +    +  + CG  H++V+TD+G VF++G S +G+LG  D     T P  V   + C ++ +A G  H +A   +G +YAWG+   GQ GLG +     P PV   GL G          ++VA +ACG   ++ VT  G +YSWG G  G LG  H +E
Sbjct:   61 DAGVDAVVCGAEYTVAVASSRGQIYSWGWGDFGRLGHGECGDVFVPRPIAFFSGRPV--ARVACGDTHTLVVTQGDGALYTFGRNQNGQLGLGHTNDCLSPQLVTALQ-----GERVSSVACGSEHSLAATEAGTVFSWGWGRYGNLGDGDSQDRYTPTRVVGLDGV---TVTSVVCGWRHSAVVTDEGRVFTFGWSKYGQLGHGDHVD-HTRPCLVAGLQHCRVSTVAGGWRHTMAADSEGNLYAWGWNKFGQLGLGDSEDRAAPTPVAGFGLAGGGVEAGAATPRRVALLACGWRHTVAVTEAGEVYSWGRGVNGQLG--HGAE 373          
The following BLAST results are available for this feature:
BLAST of NO01G04310 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
KOF95816.12.900e-3834.62hypothetical protein OCBIM_22037142mg [Octopus bim... [more]
XP_014791307.12.900e-3834.62PREDICTED: E3 ubiquitin-protein ligase HERC2-like ... [more]
OWF38491.14.900e-3834.94E3 ubiquitin-protein ligase HERC2 [Mizuhopecten ye... [more]
XP_021378317.14.900e-3834.94E3 ubiquitin-protein ligase HERC2-like isoform X4 ... [more]
XP_021378314.14.900e-3834.94E3 ubiquitin-protein ligase HERC2-like isoform X1 ... [more]
XP_021378320.14.900e-3834.94E3 ubiquitin-protein ligase HERC2-like isoform X5 ... [more]
XP_021378315.14.900e-3834.94E3 ubiquitin-protein ligase HERC2-like isoform X2 ... [more]
XP_021378316.14.900e-3834.94E3 ubiquitin-protein ligase HERC2-like isoform X3 ... [more]
XP_001702277.16.400e-3834.05predicted protein [Chlamydomonas reinhardtii][more]
AKS29686.16.400e-3834.05UV-B photoreceptor [Chlamydomonas reinhardtii] >PN... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL005nonsL005Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR047ncniR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR091ngnoR091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK007851NSK007851Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G04310.1NO01G04310.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|636785gene_448Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100028g31gene1266Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G04310.1NO01G04310.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G04310 ID=NO01G04310|Name=NO01G04310|organism=Nannochloropsis oceanica|type=gene|length=2167bp
ATGGAGGAGGAAGCGCCTCTGCAGTTTTACGGCTGTGGAGTCAATTCGTT
TTTCCAACTCGGGCCTCTCATGACCGATGGCCAAGGCGGAGGAGCAAACG
ACAAGGAACACACCACAAGTATTCCCCAAGGCCAGCATCCGTCCCATCAT
TCACGAGCGCAGGCTTGTGCCCTTCATTTACCTCAGCCTCTTGCGTTTGA
TCGATTTTTGGCGGAGGAGGACGGCCCTGTAAAGGATTTGTCATGTGGCT
CGACGTTCACCGTTGCCTTGACGACCCGCGGCATTCCGTATCAGTGGGGG
ATCTTGAATGgtacgtttgcgcgcatgaaaagaggagatggagagatccg
aagaaaatgttgcgcacgtataatagagagaccgaatgagagtctgattt
acttctaacacagGGCGGGCTTTCCCGGAACCGACGCGGGTCTCGTTGGG
CGTGCCCTTGCGGTGCATGCAAGTGGCATGTGGCCGTAAGCATACACTAG
CATTAATGGAGGGAGGTTATATCATGAGCTGGGgtacgtgctgcttttta
tatgacgaggatgggcaagagcaagaaataccggtgtgcgagcggcgagc
agagggaagcccactcattcctcccgtttcctccctccctccctccttcc
ctccctctttccgtcctttccagGTGTCGGCTATTTCGGCCAGCTTGGGC
ACGGTGACGACCTTTCGTGTGACAGGCCGCGGATGGTCCACCTGTTGGAT
CCTCCCCGCTTGGGGGGAGATCATGTCGTGGCCATTGCGTGTGGGGGGTT
GCATTCCGCCGTGTCGACAGCGGGGCAGTCGGTGTATTGTTTCGGGTTTA
ACCGATACGGGCAGGTGGGGCAGGGGCAGACGAGTGATAAAATTTCTACA
CCGCGGCCAGTGAGCATGAGCATGATAGgtaggtgctcgagagaaagaga
gggaggaggggagggagggagggagaggagggagggagaggaaccggaag
ttgcgtgtcttcaccatccttattcgttctacctctctccctcatttcct
ccattcaccctcagGTCCTGCAAGAATACGACAATTGGCCTGCGGGCGGC
ATCACACCTCCGTTTTAACAGACAAGGGACATGTCTTCTCTTGGGGTGCA
TCTTCCTTCGGTCGTCTCGGCCTGCCGGACCCCAAAAAAGTAGTCACATT
GCCGACAGAAGTCATTTCTTTTCGCGCGTGCCCTCTCGCGGCATTGGCCT
GCGGGGACTTTCATGTGCTGGCGTTGGGGATGGATGGGAAGGTTTATGCG
TGGGGGTATGGGGCCGAAGGACAGGGGGGACTGGGCGCAACGTTGCATTT
GAGGACTCCCCGACCAGTGGAGGGATTGGAAGGGCAGCAGGTGGCGCAGG
TGGCGTGTGGAGCGTGGTGGTCGATGGTGGTGACGAGACAAGGgtacgtt
gaagtggacttttgtgcggggggcggtagaaagagtaggcggaggtcgtc
cggtggcccgggaggagaaggacaacggcgtccatgttccttgctccttc
cttgtgcagtggtctcgtctcatccgctttctcccttcctatctttttct
atctcttccccccttctcttcagACGCCTGTACTCCTGGGGCTACGGTGA
CGGTGGCTGGCTTGGACTCGAGCACGCATCGGAACTCCCCTATGTGGAGC
CATGTCAACCTGTAACCAAATACGGAGCCACTTGTTCATTTGACAGCGAC
TTTAATGCTTGCTTGCCCAGCCTTGTCACAGCTTTGGCCCATCTAAAGGT
TGAAAAAGTCGTCGGCGGCGGCGGGCACACGATTGTCATGGCTAGGAGGA
TACAAAGGAGGTTCTCGAGGGCGGGAGGTAAGGTGGTGAGGCAGGAAGGT
GGGGAAGGAGGTGGGACGAGGAATGGGCTTGCAGAGGGGGTAGAGTCCAT
GTCTTTGGTGAACTCGGATGAAGAAGGCGAGGAGAATAGGCAGGAAGAAG
AGGAAGGTGGTGCAGGTGCAGAAAGGGCGAATGCCAGTCGTCGGGGGTGT
GGGGCTAGCACGAGAAGCAGCACCTCGTCAAGCTCCTCATCCTCGTCGTC
CTCCTTCTCGTCGTCTTCGTTCTCCTCCACCTCCAAATCCTCGGCATCTA
GTATGCCCACAACATGA
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protein sequence of NO01G04310.1

>NO01G04310.1-protein ID=NO01G04310.1-protein|Name=NO01G04310.1|organism=Nannochloropsis oceanica|type=polypeptide|length=536bp
MEEEAPLQFYGCGVNSFFQLGPLMTDGQGGGANDKEHTTSIPQGQHPSHH
SRAQACALHLPQPLAFDRFLAEEDGPVKDLSCGSTFTVALTTRGIPYQWG
ILNGRAFPEPTRVSLGVPLRCMQVACGRKHTLALMEGGYIMSWGVGYFGQ
LGHGDDLSCDRPRMVHLLDPPRLGGDHVVAIACGGLHSAVSTAGQSVYCF
GFNRYGQVGQGQTSDKISTPRPVSMSMIGPARIRQLACGRHHTSVLTDKG
HVFSWGASSFGRLGLPDPKKVVTLPTEVISFRACPLAALACGDFHVLALG
MDGKVYAWGYGAEGQGGLGATLHLRTPRPVEGLEGQQVAQVACGAWWSMV
VTRQGRLYSWGYGDGGWLGLEHASELPYVEPCQPVTKYGATCSFDSDFNA
CLPSLVTALAHLKVEKVVGGGGHTIVMARRIQRRFSRAGGKVVRQEGGEG
GGTRNGLAEGVESMSLVNSDEEGEENRQEEEEGGAGAERANASRRGCGAS
TRSSTSSSSSSSSSSFSSSSFSSTSKSSASSMPTT*
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