NO01G04310, NO01G04310 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G04310 vs. NCBI_GenBank
Match: KOF95816.1 (hypothetical protein OCBIM_22037142mg [Octopus bimaculoides]) HSP 1 Score: 169.5 bits (428), Expect = 2.900e-38 Identity = 108/312 (34.62%), Postives = 153/312 (49.04%), Query Frame = 0 Query: 119 LRCMQVACGRKHTLALMEGGYIMSWGVGYFGQLGHGDDLSCDRPRMVHLLDPPRLGGDHVVAIACGGLHSAVSTAGQSVYCFGFNRYGQVGQGQTSDKISTPRPVSMSMIGPARIRQLACGR--HHTSVLTDKGHVFSWGASSFGRLGL--PDPKKVVTLPTEVISFRACPLAALACGDFHVLALGMDGKVYAWGYGAEGQGGLGATLHLRTPRPVEGLEGQQVAQVACGAWWSMVVTRQGRLYSWGYGDGGWLGLEHASELPYVEPCQPVTKYGATCSFDSDFNAC-LPSLVTALAHLKVEKVVGGGGHTI 426 ++ + V G KH LAL G + +WG G G+LGHG + CDRPRMV L G V+ IA GG HSA TA +Y +G RYG++G G + D+ +P + ++ R+ +ACG T +TD V+SWG +G+LG D KV P ++ S ++ + + CG +AL G VY WG G + G G H+R PR V L+G++V +ACG+ + T G +Y+WG D G LG D NA P LVTAL K+ +V G H++ Sbjct: 3876 IKKLAVNSGGKHCLALSAEGEVFTWGEGEDGKLGHGIKIPCDRPRMVE-----ALRGKEVIDIAAGGAHSACITASGELYTWGKGRYGRLGHGDSDDQ---TKPKLVEVLKDYRVIDVACGSGDAQTLCITDDDSVWSWGDGDYGKLGRGGSDGCKV---PIKIESLQSLGVIKVECGSQFSVALTQSGAVYTWGKGDYHRLGHGTDDHVRKPRRVSALQGKKVIDIACGSLHCVACTDTGEVYTWGDNDEGQLG-------------------------DGTTNAIQRPRLVTALQGTKINRVACGSAHSL 4151
BLAST of NO01G04310 vs. NCBI_GenBank
Match: XP_014791307.1 (PREDICTED: E3 ubiquitin-protein ligase HERC2-like isoform X1 [Octopus bimaculoides]) HSP 1 Score: 169.5 bits (428), Expect = 2.900e-38 Identity = 108/312 (34.62%), Postives = 153/312 (49.04%), Query Frame = 0 Query: 119 LRCMQVACGRKHTLALMEGGYIMSWGVGYFGQLGHGDDLSCDRPRMVHLLDPPRLGGDHVVAIACGGLHSAVSTAGQSVYCFGFNRYGQVGQGQTSDKISTPRPVSMSMIGPARIRQLACGR--HHTSVLTDKGHVFSWGASSFGRLGL--PDPKKVVTLPTEVISFRACPLAALACGDFHVLALGMDGKVYAWGYGAEGQGGLGATLHLRTPRPVEGLEGQQVAQVACGAWWSMVVTRQGRLYSWGYGDGGWLGLEHASELPYVEPCQPVTKYGATCSFDSDFNAC-LPSLVTALAHLKVEKVVGGGGHTI 426 ++ + V G KH LAL G + +WG G G+LGHG + CDRPRMV L G V+ IA GG HSA TA +Y +G RYG++G G + D+ +P + ++ R+ +ACG T +TD V+SWG +G+LG D KV P ++ S ++ + + CG +AL G VY WG G + G G H+R PR V L+G++V +ACG+ + T G +Y+WG D G LG D NA P LVTAL K+ +V G H++ Sbjct: 3868 IKKLAVNSGGKHCLALSAEGEVFTWGEGEDGKLGHGIKIPCDRPRMVE-----ALRGKEVIDIAAGGAHSACITASGELYTWGKGRYGRLGHGDSDDQ---TKPKLVEVLKDYRVIDVACGSGDAQTLCITDDDSVWSWGDGDYGKLGRGGSDGCKV---PIKIESLQSLGVIKVECGSQFSVALTQSGAVYTWGKGDYHRLGHGTDDHVRKPRRVSALQGKKVIDIACGSLHCVACTDTGEVYTWGDNDEGQLG-------------------------DGTTNAIQRPRLVTALQGTKINRVACGSAHSL 4143
BLAST of NO01G04310 vs. NCBI_GenBank
Match: OWF38491.1 (E3 ubiquitin-protein ligase HERC2 [Mizuhopecten yessoensis]) HSP 1 Score: 168.7 bits (426), Expect = 4.900e-38 Identity = 109/312 (34.94%), Postives = 152/312 (48.72%), Query Frame = 0 Query: 119 LRCMQVACGRKHTLALMEGGYIMSWGVGYFGQLGHGDDLSCDRPRMVHLLDPPRLGGDHVVAIACGGLHSAVSTAGQSVYCFGFNRYGQVGQGQTSDKISTPRPVSMSMIGPARIRQLACGR--HHTSVLTDKGHVFSWGASSFGRLGL--PDPKKVVTLPTEVISFRACPLAALACGDFHVLALGMDGKVYAWGYGAEGQGGLGATLHLRTPRPVEGLEGQQVAQVACGAWWSMVVTRQGRLYSWGYGDGGWLGLEHASELPYVEPCQPVTKYGATCSFDSDFNAC-LPSLVTALAHLKVEKVVGGGGHTI 426 ++ + V G KH LAL G + SWG G G+LGHG+ CDRPR++ L G VV IA GG HSA T+ +Y +G RYG++G G + D+ PRP + + R+ +ACG T +TD +V+SWG +G+LG D KV P ++ S + + + CG +AL G VY WG G + G G H+R PR V L+G++V VACG+ + T G +Y+WG D G LG D NA P LV AL K+ +V G H++ Sbjct: 4051 IKKLAVNSGGKHCLALSAEGEVYSWGEGEDGKLGHGNRSPCDRPRVIE-----SLRGKEVVDIAAGGAHSACITSSGELYSWGKGRYGRLGHGDSEDQ---PRPKLVEAMKTHRVIDMACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKV---PMKIDSLQGLGVMKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGTDDHVRRPRRVSALQGKKVIDVACGSLHCVACTDAGEVYTWGDNDEGQLG-------------------------DGTTNAIQRPRLVAALQGKKINRVACGSAHSL 4326
BLAST of NO01G04310 vs. NCBI_GenBank
Match: XP_021378317.1 (E3 ubiquitin-protein ligase HERC2-like isoform X4 [Mizuhopecten yessoensis] >XP_021378318.1 E3 ubiquitin-protein ligase HERC2-like isoform X4 [Mizuhopecten yessoensis] >XP_021378321.1 E3 ubiquitin-protein ligase HERC2-like isoform X4 [Mizuhopecten yessoensis]) HSP 1 Score: 168.7 bits (426), Expect = 4.900e-38 Identity = 109/312 (34.94%), Postives = 152/312 (48.72%), Query Frame = 0 Query: 119 LRCMQVACGRKHTLALMEGGYIMSWGVGYFGQLGHGDDLSCDRPRMVHLLDPPRLGGDHVVAIACGGLHSAVSTAGQSVYCFGFNRYGQVGQGQTSDKISTPRPVSMSMIGPARIRQLACGR--HHTSVLTDKGHVFSWGASSFGRLGL--PDPKKVVTLPTEVISFRACPLAALACGDFHVLALGMDGKVYAWGYGAEGQGGLGATLHLRTPRPVEGLEGQQVAQVACGAWWSMVVTRQGRLYSWGYGDGGWLGLEHASELPYVEPCQPVTKYGATCSFDSDFNAC-LPSLVTALAHLKVEKVVGGGGHTI 426 ++ + V G KH LAL G + SWG G G+LGHG+ CDRPR++ L G VV IA GG HSA T+ +Y +G RYG++G G + D+ PRP + + R+ +ACG T +TD +V+SWG +G+LG D KV P ++ S + + + CG +AL G VY WG G + G G H+R PR V L+G++V VACG+ + T G +Y+WG D G LG D NA P LV AL K+ +V G H++ Sbjct: 4065 IKKLAVNSGGKHCLALSAEGEVYSWGEGEDGKLGHGNRSPCDRPRVIE-----SLRGKEVVDIAAGGAHSACITSSGELYSWGKGRYGRLGHGDSEDQ---PRPKLVEAMKTHRVIDMACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKV---PMKIDSLQGLGVMKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGTDDHVRRPRRVSALQGKKVIDVACGSLHCVACTDAGEVYTWGDNDEGQLG-------------------------DGTTNAIQRPRLVAALQGKKINRVACGSAHSL 4340
BLAST of NO01G04310 vs. NCBI_GenBank
Match: XP_021378314.1 (E3 ubiquitin-protein ligase HERC2-like isoform X1 [Mizuhopecten yessoensis]) HSP 1 Score: 168.7 bits (426), Expect = 4.900e-38 Identity = 109/312 (34.94%), Postives = 152/312 (48.72%), Query Frame = 0 Query: 119 LRCMQVACGRKHTLALMEGGYIMSWGVGYFGQLGHGDDLSCDRPRMVHLLDPPRLGGDHVVAIACGGLHSAVSTAGQSVYCFGFNRYGQVGQGQTSDKISTPRPVSMSMIGPARIRQLACGR--HHTSVLTDKGHVFSWGASSFGRLGL--PDPKKVVTLPTEVISFRACPLAALACGDFHVLALGMDGKVYAWGYGAEGQGGLGATLHLRTPRPVEGLEGQQVAQVACGAWWSMVVTRQGRLYSWGYGDGGWLGLEHASELPYVEPCQPVTKYGATCSFDSDFNAC-LPSLVTALAHLKVEKVVGGGGHTI 426 ++ + V G KH LAL G + SWG G G+LGHG+ CDRPR++ L G VV IA GG HSA T+ +Y +G RYG++G G + D+ PRP + + R+ +ACG T +TD +V+SWG +G+LG D KV P ++ S + + + CG +AL G VY WG G + G G H+R PR V L+G++V VACG+ + T G +Y+WG D G LG D NA P LV AL K+ +V G H++ Sbjct: 4138 IKKLAVNSGGKHCLALSAEGEVYSWGEGEDGKLGHGNRSPCDRPRVIE-----SLRGKEVVDIAAGGAHSACITSSGELYSWGKGRYGRLGHGDSEDQ---PRPKLVEAMKTHRVIDMACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKV---PMKIDSLQGLGVMKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGTDDHVRRPRRVSALQGKKVIDVACGSLHCVACTDAGEVYTWGDNDEGQLG-------------------------DGTTNAIQRPRLVAALQGKKINRVACGSAHSL 4413
BLAST of NO01G04310 vs. NCBI_GenBank
Match: XP_021378320.1 (E3 ubiquitin-protein ligase HERC2-like isoform X5 [Mizuhopecten yessoensis]) HSP 1 Score: 168.7 bits (426), Expect = 4.900e-38 Identity = 109/312 (34.94%), Postives = 152/312 (48.72%), Query Frame = 0 Query: 119 LRCMQVACGRKHTLALMEGGYIMSWGVGYFGQLGHGDDLSCDRPRMVHLLDPPRLGGDHVVAIACGGLHSAVSTAGQSVYCFGFNRYGQVGQGQTSDKISTPRPVSMSMIGPARIRQLACGR--HHTSVLTDKGHVFSWGASSFGRLGL--PDPKKVVTLPTEVISFRACPLAALACGDFHVLALGMDGKVYAWGYGAEGQGGLGATLHLRTPRPVEGLEGQQVAQVACGAWWSMVVTRQGRLYSWGYGDGGWLGLEHASELPYVEPCQPVTKYGATCSFDSDFNAC-LPSLVTALAHLKVEKVVGGGGHTI 426 ++ + V G KH LAL G + SWG G G+LGHG+ CDRPR++ L G VV IA GG HSA T+ +Y +G RYG++G G + D+ PRP + + R+ +ACG T +TD +V+SWG +G+LG D KV P ++ S + + + CG +AL G VY WG G + G G H+R PR V L+G++V VACG+ + T G +Y+WG D G LG D NA P LV AL K+ +V G H++ Sbjct: 3980 IKKLAVNSGGKHCLALSAEGEVYSWGEGEDGKLGHGNRSPCDRPRVIE-----SLRGKEVVDIAAGGAHSACITSSGELYSWGKGRYGRLGHGDSEDQ---PRPKLVEAMKTHRVIDMACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKV---PMKIDSLQGLGVMKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGTDDHVRRPRRVSALQGKKVIDVACGSLHCVACTDAGEVYTWGDNDEGQLG-------------------------DGTTNAIQRPRLVAALQGKKINRVACGSAHSL 4255
BLAST of NO01G04310 vs. NCBI_GenBank
Match: XP_021378315.1 (E3 ubiquitin-protein ligase HERC2-like isoform X2 [Mizuhopecten yessoensis]) HSP 1 Score: 168.7 bits (426), Expect = 4.900e-38 Identity = 109/312 (34.94%), Postives = 152/312 (48.72%), Query Frame = 0 Query: 119 LRCMQVACGRKHTLALMEGGYIMSWGVGYFGQLGHGDDLSCDRPRMVHLLDPPRLGGDHVVAIACGGLHSAVSTAGQSVYCFGFNRYGQVGQGQTSDKISTPRPVSMSMIGPARIRQLACGR--HHTSVLTDKGHVFSWGASSFGRLGL--PDPKKVVTLPTEVISFRACPLAALACGDFHVLALGMDGKVYAWGYGAEGQGGLGATLHLRTPRPVEGLEGQQVAQVACGAWWSMVVTRQGRLYSWGYGDGGWLGLEHASELPYVEPCQPVTKYGATCSFDSDFNAC-LPSLVTALAHLKVEKVVGGGGHTI 426 ++ + V G KH LAL G + SWG G G+LGHG+ CDRPR++ L G VV IA GG HSA T+ +Y +G RYG++G G + D+ PRP + + R+ +ACG T +TD +V+SWG +G+LG D KV P ++ S + + + CG +AL G VY WG G + G G H+R PR V L+G++V VACG+ + T G +Y+WG D G LG D NA P LV AL K+ +V G H++ Sbjct: 4134 IKKLAVNSGGKHCLALSAEGEVYSWGEGEDGKLGHGNRSPCDRPRVIE-----SLRGKEVVDIAAGGAHSACITSSGELYSWGKGRYGRLGHGDSEDQ---PRPKLVEAMKTHRVIDMACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKV---PMKIDSLQGLGVMKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGTDDHVRRPRRVSALQGKKVIDVACGSLHCVACTDAGEVYTWGDNDEGQLG-------------------------DGTTNAIQRPRLVAALQGKKINRVACGSAHSL 4409
BLAST of NO01G04310 vs. NCBI_GenBank
Match: XP_021378316.1 (E3 ubiquitin-protein ligase HERC2-like isoform X3 [Mizuhopecten yessoensis]) HSP 1 Score: 168.7 bits (426), Expect = 4.900e-38 Identity = 109/312 (34.94%), Postives = 152/312 (48.72%), Query Frame = 0 Query: 119 LRCMQVACGRKHTLALMEGGYIMSWGVGYFGQLGHGDDLSCDRPRMVHLLDPPRLGGDHVVAIACGGLHSAVSTAGQSVYCFGFNRYGQVGQGQTSDKISTPRPVSMSMIGPARIRQLACGR--HHTSVLTDKGHVFSWGASSFGRLGL--PDPKKVVTLPTEVISFRACPLAALACGDFHVLALGMDGKVYAWGYGAEGQGGLGATLHLRTPRPVEGLEGQQVAQVACGAWWSMVVTRQGRLYSWGYGDGGWLGLEHASELPYVEPCQPVTKYGATCSFDSDFNAC-LPSLVTALAHLKVEKVVGGGGHTI 426 ++ + V G KH LAL G + SWG G G+LGHG+ CDRPR++ L G VV IA GG HSA T+ +Y +G RYG++G G + D+ PRP + + R+ +ACG T +TD +V+SWG +G+LG D KV P ++ S + + + CG +AL G VY WG G + G G H+R PR V L+G++V VACG+ + T G +Y+WG D G LG D NA P LV AL K+ +V G H++ Sbjct: 4132 IKKLAVNSGGKHCLALSAEGEVYSWGEGEDGKLGHGNRSPCDRPRVIE-----SLRGKEVVDIAAGGAHSACITSSGELYSWGKGRYGRLGHGDSEDQ---PRPKLVEAMKTHRVIDMACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKV---PMKIDSLQGLGVMKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGTDDHVRRPRRVSALQGKKVIDVACGSLHCVACTDAGEVYTWGDNDEGQLG-------------------------DGTTNAIQRPRLVAALQGKKINRVACGSAHSL 4407
BLAST of NO01G04310 vs. NCBI_GenBank
Match: XP_001702277.1 (predicted protein [Chlamydomonas reinhardtii]) HSP 1 Score: 168.3 bits (425), Expect = 6.400e-38 Identity = 111/326 (34.05%), Postives = 168/326 (51.53%), Query Frame = 0 Query: 74 DGPVKDLSCGSTFTVAL-TTRGIPYQWG------ILNGRA----FPEPTRVSLGVPLRCMQVACGRKHTLALMEG-GYIMSWGVGYFGQLGHGDDLSCDRPRMVHLLDPPRLGGDHVVAIACGGLHSAVSTAGQSVYCFGFNRYGQVGQGQTSDKISTPRPVSMSMIGPARIRQLACGRHHTSVLTDKGHVFSWGASSFGRLGLPDPKKVVTLPTEVISFRACPLAALACGDFHVLALGMDGKVYAWGYGAEGQGGLGATLHLRTPRPVE--GLEG----------QQVAQVACGAWWSMVVTRQGRLYSWGYGDGGWLGLEHASE 376 D V + CG+ +TVA+ ++RG Y WG + +G P P G P+ +VACG HTL + +G G + ++G GQLG G C P++V L G+ V ++ACG HS +T +V+ +G+ RYG +G G + D+ + R V + + + + CG H++V+TD+G VF++G S +G+LG D T P V + C ++ +A G H +A +G +YAWG+ GQ GLG + P PV GL G ++VA +ACG ++ VT G +YSWG G G LG H +E Sbjct: 61 DAGVDAVVCGAEYTVAVASSRGQIYSWGWGDFGRLGHGECGDVFVPRPIAFFSGRPV--ARVACGDTHTLVVTQGDGALYTFGRNQNGQLGLGHTNDCLSPQLVTALQ-----GERVSSVACGSEHSLAATEAGTVFSWGWGRYGNLGDGDSQDRYTPTRVVGLDGV---TVTSVVCGWRHSAVVTDEGRVFTFGWSKYGQLGHGDHVD-HTRPCLVAGLQHCRVSTVAGGWRHTMAADSEGNLYAWGWNKFGQLGLGDSEDRAAPTPVAGFGLAGGGVEAGAATPRRVALLACGWRHTVAVTEAGEVYSWGRGVNGQLG--HGAE 373
BLAST of NO01G04310 vs. NCBI_GenBank
Match: AKS29686.1 (UV-B photoreceptor [Chlamydomonas reinhardtii] >PNW83310.1 hypothetical protein CHLRE_05g230600v5 [Chlamydomonas reinhardtii]) HSP 1 Score: 168.3 bits (425), Expect = 6.400e-38 Identity = 111/326 (34.05%), Postives = 168/326 (51.53%), Query Frame = 0 Query: 74 DGPVKDLSCGSTFTVAL-TTRGIPYQWG------ILNGRA----FPEPTRVSLGVPLRCMQVACGRKHTLALMEG-GYIMSWGVGYFGQLGHGDDLSCDRPRMVHLLDPPRLGGDHVVAIACGGLHSAVSTAGQSVYCFGFNRYGQVGQGQTSDKISTPRPVSMSMIGPARIRQLACGRHHTSVLTDKGHVFSWGASSFGRLGLPDPKKVVTLPTEVISFRACPLAALACGDFHVLALGMDGKVYAWGYGAEGQGGLGATLHLRTPRPVE--GLEG----------QQVAQVACGAWWSMVVTRQGRLYSWGYGDGGWLGLEHASE 376 D V + CG+ +TVA+ ++RG Y WG + +G P P G P+ +VACG HTL + +G G + ++G GQLG G C P++V L G+ V ++ACG HS +T +V+ +G+ RYG +G G + D+ + R V + + + + CG H++V+TD+G VF++G S +G+LG D T P V + C ++ +A G H +A +G +YAWG+ GQ GLG + P PV GL G ++VA +ACG ++ VT G +YSWG G G LG H +E Sbjct: 61 DAGVDAVVCGAEYTVAVASSRGQIYSWGWGDFGRLGHGECGDVFVPRPIAFFSGRPV--ARVACGDTHTLVVTQGDGALYTFGRNQNGQLGLGHTNDCLSPQLVTALQ-----GERVSSVACGSEHSLAATEAGTVFSWGWGRYGNLGDGDSQDRYTPTRVVGLDGV---TVTSVVCGWRHSAVVTDEGRVFTFGWSKYGQLGHGDHVD-HTRPCLVAGLQHCRVSTVAGGWRHTMAADSEGNLYAWGWNKFGQLGLGDSEDRAAPTPVAGFGLAGGGVEAGAATPRRVALLACGWRHTVAVTEAGEVYSWGRGVNGQLG--HGAE 373 The following BLAST results are available for this feature:
BLAST of NO01G04310 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G04310 ID=NO01G04310|Name=NO01G04310|organism=Nannochloropsis oceanica|type=gene|length=2167bpback to top protein sequence of NO01G04310.1 >NO01G04310.1-protein ID=NO01G04310.1-protein|Name=NO01G04310.1|organism=Nannochloropsis oceanica|type=polypeptide|length=536bpback to top Synonyms
Publications
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