NO01G04270, NO01G04270 (gene) Nannochloropsis oceanica

Overview
NameNO01G04270
Unique NameNO01G04270
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2190
Alignment locationchr1:1141884..1144073 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:1141884..1144073 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR036034PDZ_sf
IPR001478PDZ
Homology
BLAST of NO01G04270 vs. NCBI_GenBank
Match: EWM29359.1 (hypothetical protein Naga_100028g36 [Nannochloropsis gaditana])

HSP 1 Score: 673.3 bits (1736), Expect = 8.400e-190
Identity = 474/763 (62.12%), Postives = 510/763 (66.84%), Query Frame = 0
Query:    1 MTLWTSPVPMHMTGKEVTAPRMDTLNQQERNVST--------------PXXXXXXXXXXXXXXXXXXXXXXXXXXSQRRQTLGTVPSAAEIHQSQEKWLEFAPTSPQRRASFVSEPGAIDGNPFEIFKEPARIDSLGTQKQSFYEAGTSYSVKQHAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGLNSSRPASRSSNPFYEAPLSPIRYNKPVAKVELSPQSSALSTAAFMELNPLRRTESPTASIPLDQLKLVTYNK------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWGAWXXXXXXXXXXXXXXXXXXXXXXXPTEWGAFGSAQPXXXXXXXXXXXXXXXXXXXFGDSFCWPPAAGPRERAASVGTVAKAPNSDELNLF------LSGVGGGKEGGGGAIFDPVRQKSLAESSFDLSVGAFFPEEAVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGIGGLEMQDDHFRHEGEGGREGRGVNEGASGMYYEVTFTAPTTFGMLLERKDEWTRGAVARRERTVVTLVVEGGEAEGKGVGLGSMLASINGEDVTGLTYKETLERIKSQARPMTVVFERESLKEEVLQGYFFVSKGPFFSNPTTMDKWKRKYIVLGGPIAKKNVFQIYDSKRAYHNTVVALFQRKRPAHRVKTYALTYAFKLSPLQERKMEGHTAPLKFFAFMTPAARFKSIRIASETRKNVAALHERFGRFAGKS 726
            MTLWTSPVPMHM GK+VTAPRM+T  Q     +T               XXXXXXXXXXXXXXXXXXXXXXXXX  QRRQTL  VPSAAE+H  QEKWLEFAPTSPQRRASFV EPG +DGNPFEIFKEPAR D  G+  QSFYEAG SYS KQHAP                                  +S RP+S + NPF EAPLSPIRYNKP+AKVELSPQS+ALS  AF  L+PL+RTESPTAS+PLDQLK+  YN+                                      XXXXXXXXXXXXXXXXXX   W AW                        TEW AFG++                     F ++F W    G              PNSD+  +                    AIFDPVRQKSLA++SFDLSVG FFPEE             XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDG G LEMQ++HF   GEGG    G    ASGMYYEV FTAPTTFGMLLERKDEW RG+VARRERTVVTLVVEGGEAE KGV +GSM+ SINGE+VTGLTYKETLERIK QARPM VVFERESL E+VLQGYFFVSKGPFFSNPTTMDKWKRKYIVLGGPIAKKNV QIYDSKRAYHNTVVALFQRKRP+HRVKTYALTYAFKLS LQER+M+GHTAPLKFFAFMTPAARFKS+RIASETRK+V  L ERF RFAGKS
Sbjct:    1 MTLWTSPVPMHMAGKQVTAPRMETAVQDGEPSNTVSVVLASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPHQRRQTLANVPSAAEVHGRQEKWLEFAPTSPQRRASFVDEPGVVDGNPFEIFKEPARADHFGS--QSFYEAGASYSAKQHAPPPSAASSVVSRPASATRLTASSIPLGPERLD---SSYRPSSSTGNPFCEAPLSPIRYNKPIAKVELSPQSTALSAVAFSALDPLKRTESPTASVPLDQLKISAYNREQEVLAAAKAAEEQGKQFQESEHYRRQLQLQQPQPTAHXXXXXXXXXXXXXXXXXXQGDWSAW------PMQQGVLQAASQAQPASSTEWDAFGAS-------PTVFPQKAPPSQPTFDNNFGWQSIPG--------AFTTTTPNSDDFRVLGXXXXXXXXXXXXXXXXXXAIFDPVRQKSLADASFDLSVGGFFPEEPTGAHTNAGTGSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGTGELEMQEEHF---GEGGSGLEGRQRSASGMYYEVAFTAPTTFGMLLERKDEWVRGSVARRERTVVTLVVEGGEAEAKGVAVGSMIVSINGEEVTGLTYKETLERIKGQARPMQVVFERESLNEDVLQGYFFVSKGPFFSNPTTMDKWKRKYIVLGGPIAKKNVLQIYDSKRAYHNTVVALFQRKRPSHRVKTYALTYAFKLSQLQERRMDGHTAPLKFFAFMTPAARFKSVRIASETRKSVQGLQERFSRFAGKS 734          
BLAST of NO01G04270 vs. NCBI_GenBank
Match: CBJ26333.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 169.9 bits (429), Expect = 3.000e-38
Identity = 95/238 (39.92%), Postives = 134/238 (56.30%), Query Frame = 0
Query:  484 GEGGREGRGVNEGASGMYYEVTFTAPTTFGMLLERKDEWTRGAVARRERTVVTLVVEGGEAEGKGVGLGSMLASINGEDVTGLTYKETLERIKSQARPMTVVFERESLKEEVLQGYFFVSKGPFFSNPTTMDKWKRKYIVLGGPIAKKNVFQIYDSKRAYHNTVVALFQRKRPAHRVKTYALTYAFKLSPLQERKMEGHTAPLKFFAFMTPAARFKSIRIASETRKNVAALHERFGRF 722
            G GGR G  V+       Y V F      GMLLER DEW  G   R ER +V +VV+ G A+ +GV +GS +  +NG+ V GLTY++TLE IK+ ARP+ V FER  L++E   G     K      P +   W+R+Y VLGG +AK +V Q+Y SK++Y   V+A+F+ +R   RVK Y L+  FK  P++ +  +GH  PL FF    P +R K +  AS+   ++  L     +F
Sbjct:  237 GAGGRRGDTVD-------YIVEFERARKLGMLLERHDEWPDGREKRSERAIVKMVVDSGPAKIRGVTVGSKVKRVNGDTVEGLTYQQTLECIKNAARPLRVEFERGQLEQEDNVGQILFKK--TVGVPRSYSAWQRRYFVLGGAVAKVHVLQVYVSKQSYDRMVLAVFENRRINERVKAYKLSNLFKCGPIKVKSFKGHPTPLYFFTVKLPKSRLKQLNFASQNLGDLQHLRTSISKF 465          
BLAST of NO01G04270 vs. NCBI_GenBank
Match: OQR96042.1 (hypothetical protein ACHHYP_17196 [Achlya hypogyna])

HSP 1 Score: 129.0 bits (323), Expect = 5.900e-26
Identity = 76/217 (35.02%), Postives = 123/217 (56.68%), Query Frame = 0
Query:  502 YEVTFTAPTTFGMLLERKDEWTRGAVARRERTVVTLVVEGGEAEGKGVGLGSMLASINGEDVTGLTYKETLERIKSQARPMTVVFERESLKEEVLQGYFF--VSKGPFFSNPTTMD--KWKRKYIVLGGPIAKKNVFQIYDSKRAYHNTVVALFQRKRPAHRVKTYALTYAFKLSPLQERKMEGHTAPLKFFAFMTPAARFKSIRIASETRKNVAAL 715
            YEV F + +  G+L+ER D + +    +RE  VV LVVEGG A+  GV +GS++  IN +D+   +Y  TL+ IK+  RPMT+  +  S  +EV QG     +S G F     T    KW  KY   GG  AK +V Q++ S+ AYH  V+AL++++  +  ++++ L    KLSP++ +  +G+   L +F+   P+ RF + + ASE  + +  +
Sbjct:  306 YEVIFESGSKLGVLMERVDTYAKDTRQKRELAVVKLVVEGGAADRIGVKVGSIIRGINDQDLMYESYNTTLDLIKTAPRPMTIRLKDRSETKEVTQGAVLTRISNGTFSVGNLTSGNAKWDSKYFAFGG--AKMDVLQLFVSRAAYHECVIALYEKRHVSTPIQSFRLCRDHKLSPIKSKIYKGY-GNLHYFSLTVPSLRFIAAKFASENYETIKTM 519          
BLAST of NO01G04270 vs. NCBI_GenBank
Match: GAX92802.1 (Hypothetical protein PINS_000705 [Pythium insidiosum])

HSP 1 Score: 127.5 bits (319), Expect = 1.700e-25
Identity = 77/215 (35.81%), Postives = 120/215 (55.81%), Query Frame = 0
Query:  502 YEVTFTAPTTFGMLLERKDEW-TRGAVARRERTVVTLVVEGGEAEGKGVGLGSMLASINGEDVTGLTYKETLERIKSQARPMTVVFERESLKEEVLQGYFF--VSKGPFFSNPTTMDK--WKRKYIVLGGPIAKKNVFQIYDSKRAYHNTVVALFQRKRPAHRVKTYALTYAFKLSPLQERKMEGHTAPLKFFAFMTPAARFKSIRIASETRKNV 712
            Y+VTF +    G+L+ER D W  +    R+E  VV LVVE G A+  GV +GS + +ING  V   TY   LE IKS  RPMTV F+R ++ ++  QG     +S G F     T     W  KY   GG  AK +V Q++ S+ AYH  V++L++++    +++++ L    K+SP++ +  +G+   L +F+   P+ RF + + ASE  + V
Sbjct:  273 YDVTFDSGRKLGVLMERVDVWGGKREERRQESAVVKLVVENGAADRVGVTIGSSVVAINGRSVANATYTSVLELIKSAPRPMTVRFKRGTVNKDTTQGNILTRISNGTFSVGNFTSGNATWTPKYFAFGG--AKMDVLQLFVSRAAYHECVISLYEKRAVHTQIQSFRLCRDHKISPIKTKIYKGY-GNLHYFSLTVPSLRFVAAKFASEDYETV 484          
BLAST of NO01G04270 vs. NCBI_GenBank
Match: OQS05647.1 (cleavage induced hypothetical protein [Thraustotheca clavata])

HSP 1 Score: 126.7 bits (317), Expect = 2.900e-25
Identity = 76/217 (35.02%), Postives = 120/217 (55.30%), Query Frame = 0
Query:  502 YEVTFTAPTTFGMLLERKDEWTRGAVARRERTVVTLVVEGGEAEGKGVGLGSMLASINGEDVTGLTYKETLERIKSQARPMTVVFERESLKEEVLQGYFF--VSKGPFFSNPTTMD--KWKRKYIVLGGPIAKKNVFQIYDSKRAYHNTVVALFQRKRPAHRVKTYALTYAFKLSPLQERKMEGHTAPLKFFAFMTPAARFKSIRIASETRKNVAAL 715
            YEV F   +  G+L+ER D + +    +RE  VV LVVEGG A+  GV +GS++  IN  D+   +Y   LE IK+  RPMT+  +  S  +EV QG     +S G F     T    KW  KY   GG  AK +V Q++ S+ AYH  V+AL++++  +  ++++ L    KLSP++ +  +G+   L +F+   P+ RF + + ASE  + +  +
Sbjct:  268 YEVIFEYGSKLGVLMERVDTYAKDTRQKRELAVVKLVVEGGAADRIGVKVGSVIRGINDRDMAYESYNTVLELIKTVPRPMTIRLQDRSETKEVTQGNVLTRISNGTFSVGNLTSGNAKWDSKYFAFGG--AKMDVLQLFVSRAAYHECVIALYEKRHVSTLIQSFRLCRDHKLSPIKSKIYKGY-GNLHYFSLTVPSLRFIAAKFASENYETIKTM 481          
BLAST of NO01G04270 vs. NCBI_GenBank
Match: XP_008610832.1 (hypothetical protein SDRG_06805 [Saprolegnia diclina VS20] >EQC36070.1 hypothetical protein SDRG_06805 [Saprolegnia diclina VS20])

HSP 1 Score: 125.6 bits (314), Expect = 6.500e-25
Identity = 75/217 (34.56%), Postives = 121/217 (55.76%), Query Frame = 0
Query:  502 YEVTFTAPTTFGMLLERKDEWTRGAVARRERTVVTLVVEGGEAEGKGVGLGSMLASINGEDVTGLTYKETLERIKSQARPMTVVFERESLKEEVLQGYFF--VSKGPFFSNPTTMD--KWKRKYIVLGGPIAKKNVFQIYDSKRAYHNTVVALFQRKRPAHRVKTYALTYAFKLSPLQERKMEGHTAPLKFFAFMTPAARFKSIRIASETRKNVAAL 715
            YEV F   +  G+L+ER D +++    +RE  VV LVVEGG A+  GV +GS++  IN  D+   +Y   L+ IK+  RPMT+  +  S  +EV QG     +S G F     T    KW  KY   GG  AK +V Q++ S+ AYH  V+AL++++  +  ++++ L    KLSP++ +  +G+   L +F+   P+ RF + + ASE  + +  +
Sbjct:  305 YEVIFEFGSKLGVLMERVDTYSKDTRQKRELAVVKLVVEGGAADRIGVKVGSIIRGINDRDLMYESYNTVLDLIKTAPRPMTIRLKDRSETKEVTQGAVLTRISNGTFSVGNLTSGNAKWDSKYFAFGG--AKMDVLQLFVSRAAYHECVIALYEKRHVSTPIQSFRLCRDHKLSPIKSKIYKGY-GNLHYFSLTVPSLRFIAAKFASENYETIKTM 518          
BLAST of NO01G04270 vs. NCBI_GenBank
Match: XP_008873617.1 (hypothetical protein H310_09346 [Aphanomyces invadans] >ETV98056.1 hypothetical protein H310_09346 [Aphanomyces invadans])

HSP 1 Score: 122.5 bits (306), Expect = 5.500e-24
Identity = 75/219 (34.25%), Postives = 123/219 (56.16%), Query Frame = 0
Query:  502 YEVTFTAPTTFGMLLERKDEWTR--GAVARRERTVVTLVVEGGEAEGKGVGLGSMLASINGEDVTGLTYKETLERIKSQARPMTVVFERESLKEEVLQGYFF--VSKGPFFSNPTTMD--KWKRKYIVLGGPIAKKNVFQIYDSKRAYHNTVVALFQRKRPAHRVKTYALTYAFKLSPLQERKMEGHTAPLKFFAFMTPAARFKSIRIASETRKNVAAL 715
            YEV F   +  G+L+ER D + +      +RE  VV LVVEGG A+  GV +GS++  ING+D+   +Y   L+ IKS  RPMT+  +  +  +E  QG     +S G F     T    KW  KY   GG  AK +V Q++ S+ AYH  V+AL+++++ + +++++ L    KLSP++ +  +G+   L +F+   P+ RF + + ASE    + ++
Sbjct:  315 YEVVFDYGSKLGVLMERVDTFVKENKQDRKRELAVVKLVVEGGAADRIGVKVGSIIRGINGKDMARESYNTVLDLIKSAPRPMTIRLKEHNDAKETSQGAVLTRISSGTFSVGNLTAGNAKWDSKYFAFGG--AKMDVLQLFVSRAAYHECVIALYEKRQVSTQIQSFRLYGDHKLSPIKSKIYKGY-GNLHYFSLTVPSLRFVAAKFASENYDTIKSM 530          
BLAST of NO01G04270 vs. NCBI_GenBank
Match: XP_009829943.1 (hypothetical protein H257_06431 [Aphanomyces astaci] >ETV80996.1 hypothetical protein H257_06431 [Aphanomyces astaci])

HSP 1 Score: 120.9 bits (302), Expect = 1.600e-23
Identity = 74/211 (35.07%), Postives = 120/211 (56.87%), Query Frame = 0
Query:  502 YEVTFTAPTTFGMLLERKDEWTRGAV--ARRERTVVTLVVEGGEAEGKGVGLGSMLASINGEDVTGLTYKETLERIKSQARPMTVVFERESLKEEVLQGYFF--VSKGPFFSNPTTMD--KWKRKYIVLGGPIAKKNVFQIYDSKRAYHNTVVALFQRKRPAHRVKTYALTYAFKLSPLQERKMEGHTAPLKFFAFMTPAARFKSIRIASE 707
            YEV F   +  G+L+ER D + +  +   +RE  VV LVVEGG A+  GV +GS++  IN +D+   +Y   LE IK+  RPMT+  +  +  +E  QG     +S G F     T    KW  KY   GG  AK +V Q++ S+ AYH  V+AL+++++ + +++++ L    KLSP++ +  +G+   L +F+   P+ RF + + ASE
Sbjct:  322 YEVMFDYGSKLGVLMERMDVYVKDNMQDQKRELAVVKLVVEGGAADRIGVKVGSVIRGINHKDMEHESYNTVLELIKTAPRPMTIRLKERNESKETSQGAVLTRISSGTFSVGNLTAGNAKWDSKYFAFGG--AKMDVLQLFVSRAAYHECVIALYEKRQVSTQIQSFRLYRDHKLSPIKSKIYKGY-GNLHYFSLTVPSLRFVAAKFASE 529          
BLAST of NO01G04270 vs. NCBI_GenBank
Match: XP_008905425.1 (hypothetical protein PPTG_11925 [Phytophthora parasitica INRA-310] >ETL40488.1 hypothetical protein L916_08338 [Phytophthora parasitica] >ETN09592.1 hypothetical protein PPTG_11925 [Phytophthora parasitica INRA-310])

HSP 1 Score: 118.6 bits (296), Expect = 7.900e-23
Identity = 74/217 (34.10%), Postives = 119/217 (54.84%), Query Frame = 0
Query:  502 YEVTFTAPTTFGMLLERKDEWTRGAVARRERTVVTLVVEGGEAEGKGVGLGSMLASINGEDVTGLTYKETLERIKSQARPMTVVFERESLKEEVLQGYFF--VSKGPFFSNPTTMDK--WKRKYIVLGGPIAKKNVFQIYDSKRAYHNTVVALFQRKRPAHRVKTYALTYAFKLSPLQERKMEGHTAPLKFFAFMTPAARFKSIRIASE---TRKNV 712
            Y+V F +    G+L+ER D W   A  R+E  VV LVVE G A+  GV +GS + +IN + V   TY   LE IK+  RP+ + F+R S  ++  QG     +S G F     T     W  KY   GG  +K +V Q++ S+ AYH  V+AL++++    +++++ L    K+SP++ +  +G+   L +F+   P+ RF + + AS+   T KN+
Sbjct:  336 YDVRFESGRKLGVLMERVDVW-NAANQRKETAVVKLVVENGAADRVGVSIGSTVVAINRKSVENETYVAILEMIKAAPRPLRMRFQRGSQNKDTTQGTILTRISNGTFSVGNLTSGNATWTTKYFAFGG--SKMDVLQLFVSRAAYHECVIALYEKRGVHTQIQSFRLCRDHKISPIKSKIYKGY-GNLHYFSLSVPSLRFVAAKFASDDYATIKNI 548          
BLAST of NO01G04270 vs. NCBI_GenBank
Match: ETO75834.1 (hypothetical protein F444_08652 [Phytophthora parasitica P1976])

HSP 1 Score: 118.6 bits (296), Expect = 7.900e-23
Identity = 74/217 (34.10%), Postives = 119/217 (54.84%), Query Frame = 0
Query:  502 YEVTFTAPTTFGMLLERKDEWTRGAVARRERTVVTLVVEGGEAEGKGVGLGSMLASINGEDVTGLTYKETLERIKSQARPMTVVFERESLKEEVLQGYFF--VSKGPFFSNPTTMDK--WKRKYIVLGGPIAKKNVFQIYDSKRAYHNTVVALFQRKRPAHRVKTYALTYAFKLSPLQERKMEGHTAPLKFFAFMTPAARFKSIRIASE---TRKNV 712
            Y+V F +    G+L+ER D W   A  R+E  VV LVVE G A+  GV +GS + +IN + V   TY   LE IK+  RP+ + F+R S  ++  QG     +S G F     T     W  KY   GG  +K +V Q++ S+ AYH  V+AL++++    +++++ L    K+SP++ +  +G+   L +F+   P+ RF + + AS+   T KN+
Sbjct:  336 YDVRFESGRKLGVLMERVDVW-NAANQRKETAVVKLVVENGAADRVGVSIGSTVVAINRKSVENETYVAILEMIKAAPRPLRMRFQRGSQNKDTTQGTILTRISNGTFSVGNLTSGNATWTTKYFAFGG--SKMDVLQLFVSRAAYHECVIALYEKRGVHTQIQSFRLCRDHKISPIKSKIYKGY-GNLHYFSLSVPSLRFVAAKFASDDYATIKNI 548          
The following BLAST results are available for this feature:
BLAST of NO01G04270 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM29359.18.400e-19062.12hypothetical protein Naga_100028g36 [Nannochlorops... [more]
CBJ26333.13.000e-3839.92conserved unknown protein [Ectocarpus siliculosus][more]
OQR96042.15.900e-2635.02hypothetical protein ACHHYP_17196 [Achlya hypogyna... [more]
GAX92802.11.700e-2535.81Hypothetical protein PINS_000705 [Pythium insidios... [more]
OQS05647.12.900e-2535.02cleavage induced hypothetical protein [Thraustothe... [more]
XP_008610832.16.500e-2534.56hypothetical protein SDRG_06805 [Saprolegnia dicli... [more]
XP_008873617.15.500e-2434.25hypothetical protein H310_09346 [Aphanomyces invad... [more]
XP_009829943.11.600e-2335.07hypothetical protein H257_06431 [Aphanomyces astac... [more]
XP_008905425.17.900e-2334.10hypothetical protein PPTG_11925 [Phytophthora para... [more]
ETO75834.17.900e-2334.10hypothetical protein F444_08652 [Phytophthora para... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL005nonsL005Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR047ncniR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR091ngnoR091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK007856NSK007856Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G04270.1NO01G04270.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|242665gene_443Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100028g36gene1270Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G04270.1NO01G04270.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G04270 ID=NO01G04270|Name=NO01G04270|organism=Nannochloropsis oceanica|type=gene|length=2190bp
ATGACGCTGTGGACCAGCCCCGTACCGATGCATATGACGGGCAAGGAGGT
CACGGCACCACGGATGGACACCCTTAACCAACAAGAAAGAAACGTCTCCA
CCCCCGTCTCGGCCCCCCTCGCCGCCCAGGGCGCTAGCGCCGGCGCTGGA
CGTAGCAGCAGTAGCTCGAGCAACAATGCACCATCGCAACGTCGCCAAAC
TCTGGGGACGGTTCCGTCGGCGGCAGAAATACACCAAAGCCAAGAGAAAT
GGCTTGAATTCGCCCCCACTTCTCCCCAACGACGTGCCTCCTTTGTCAGC
GAGCCTGGCGCAATTGATGGGAACCCCTTCGAGATCTTCAAGGAGCCCGC
ACGCATTGATAGCCTTGGCACACAAAAGCAAAGTTTCTATGAGGCAGGGA
CATCCTACTCCGTCAAACAACATGCCCCCCCCCTTTCCTCAGCCTCTTCC
CCTCCCCCCTCTATTCCGCCTCCCCCAACTACCACCCAATGCAACACCAC
TTTCGCCTCCTCCTCCTCGTCCCTTGGTCTGAACTCTTCCCGCCCAGCTT
CTCGAAGTTCCAACCCGTTCTACGAAGCTCCCCTGAGCCCGATTCGTTAC
AACAAGCCCGTGGCGAAAGTTGAACTTTCTCCTCAAAGCTCGGCTTTGTC
CACTGCAGCGTTTATGGAACTGAACCCTCTCAGGCGAACGGAGTCCCCCA
CCGCATCTATCCCCTTGGATCAATTGAAGTTAGTAACATACAATAAAGAG
CAGGCGGCGATTGCGGCGGCAGTGGCGGCACAGCAGCAGGAGCAGATGCA
GCAGGAGAGATTGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGC
AGCAGCAGCAGCAGCAGCAGTGGGGGGCATGGCCTCAGCAACAGCGACAG
CAGCAGCAGCAGTGGGGGGCATGGCCACAGCAACAACAGCAGCACCAGCC
GCCGACGGAATGGGGTGCATTTGGGTCCGCTCAACCCAAACAGCAATCGC
AGCAGCAACAACAACAACAACAACAACAGCAACAGCAGGAGGGGTTTGGA
GACTCTTTTTGTTGGCCTCCGGCTGCAGGCCCCAGGGAAAGAGCAGCATC
AGTAGGGACTGTAGCCAAGGCGCCCAACTCGGACGAATTAAACCTTTTCC
TGAGTGGTGTTGGAGGAGGGAAAGAGGGGGGAGGAGGGGCGATTTTTGAC
CCTGTCCGACAGAAATCTCTGGCGGAAAGTTCGTTTGATTTAAGCGTGGG
AGCCTTCTTTCCTGAAGAGGCTGTGGCGAAGGAGGGAGGAAGAGCGAGGA
GGAGCAGCAGCAGGATGGGGTATGGAGAGGAAGAGGAGGAAGATGAGGAG
GAGGAGCCGGTGGACCACCATGATGAGGAGGACGACGGGTCAACCGGGGG
GGATGGGATAGGGGGATTGGAGATGCAGGATGACCATTTTCGCCATGAGG
GGGAAGGGGGGAGGGAAGGGAGGGGGGTAAACGAAGGGGCATCGGGCATG
TATTATGAGGTGACGTTCACAGCGCCGACTACGTTTGGGATGTTGTTGGA
GAGGAAGGATGAGTGGACCCGAGGGGCGGTTGCGAGAAGGGAGAGGACGG
TGGTCACACTCGTGGTGGAGGGGGGGGAGGCAGAGGGTAAGGGGGTGGGG
CTTGGGAGCATGCTTGCTTCGATAAATGGAGAAGATGTCACGGGGTTGAC
TTACAAAGAGACGTTGGAGAGGATTAAGAGCCAGGCGAGGCCAATGACGG
TTGTGTTTGAGCGGGAAAGCTTGAAAGAGGAGGTGTTGCAGGGATATTTT
TTCGTGAGCAAGGGACCGTTTTTCTCAAACCCGACCACGATGGACAAGTG
GAAGAGGAAGTACATTGTCCTCGGGGGACCGATTGCCAAAAAGAACGTCT
TTCAGATTTATGATTCGAAACGGGCGTACCATAACACTGTCGTGGCCTTG
TTCCAGCGCAAGCGGCCCGCGCATCGCGTGAAGACGTATGCGTTGACGTA
TGCCTTCAAGCTCTCTCCATTGCAGGAACGGAAGATGGAGGGACATACCG
CCCCTTTGAAATTTTTCGCATTTATGACTCCAGCGGCGAGGTTCAAGAGT
ATTCGAATAGCGAGTGAGACGAGGAAGAACGTGGCGGCATTGCATGAGAG
ATTCGGGCGGTTTGCAGGCAAAAGCCAGGGAGCAAGATAG
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protein sequence of NO01G04270.1

>NO01G04270.1-protein ID=NO01G04270.1-protein|Name=NO01G04270.1|organism=Nannochloropsis oceanica|type=polypeptide|length=730bp
MTLWTSPVPMHMTGKEVTAPRMDTLNQQERNVSTPVSAPLAAQGASAGAG
RSSSSSSNNAPSQRRQTLGTVPSAAEIHQSQEKWLEFAPTSPQRRASFVS
EPGAIDGNPFEIFKEPARIDSLGTQKQSFYEAGTSYSVKQHAPPLSSASS
PPPSIPPPPTTTQCNTTFASSSSSLGLNSSRPASRSSNPFYEAPLSPIRY
NKPVAKVELSPQSSALSTAAFMELNPLRRTESPTASIPLDQLKLVTYNKE
QAAIAAAVAAQQQEQMQQERLQQQQQQQQQQQQQQQQQQQWGAWPQQQRQ
QQQQWGAWPQQQQQHQPPTEWGAFGSAQPKQQSQQQQQQQQQQQQQEGFG
DSFCWPPAAGPRERAASVGTVAKAPNSDELNLFLSGVGGGKEGGGGAIFD
PVRQKSLAESSFDLSVGAFFPEEAVAKEGGRARRSSSRMGYGEEEEEDEE
EEPVDHHDEEDDGSTGGDGIGGLEMQDDHFRHEGEGGREGRGVNEGASGM
YYEVTFTAPTTFGMLLERKDEWTRGAVARRERTVVTLVVEGGEAEGKGVG
LGSMLASINGEDVTGLTYKETLERIKSQARPMTVVFERESLKEEVLQGYF
FVSKGPFFSNPTTMDKWKRKYIVLGGPIAKKNVFQIYDSKRAYHNTVVAL
FQRKRPAHRVKTYALTYAFKLSPLQERKMEGHTAPLKFFAFMTPAARFKS
IRIASETRKNVAALHERFGRFAGKSQGAR*
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