NO01G04250, NO01G04250 (gene) Nannochloropsis oceanica

Overview
NameNO01G04250
Unique NameNO01G04250
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4834
Alignment locationchr1:1134855..1139688 +

Link to JBrowse

Properties
Property NameValue
DescriptionRibosome assembly protein 4
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:1134855..1139688 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR036322WD40_repeat_dom_sf
IPR037516Tripartite_DENN
IPR017986WD40_repeat_dom
IPR001194DENN_dom
IPR001680WD40_repeat
IPR005112dDENN_dom
IPR020472G-protein_beta_WD-40_rep
Homology
BLAST of NO01G04250 vs. NCBI_GenBank
Match: EWM29362.1 (ribosome assembly protein 4 [Nannochloropsis gaditana])

HSP 1 Score: 1091.3 bits (2821), Expect = 0.000e+0
Identity = 714/1526 (46.79%), Postives = 817/1526 (53.54%), Query Frame = 0
Query:    7 MAESLLALMYPLQWQHPYLVPLPRELLVVVETPTNYILGIHTDWLVDVPWESLKDVVLVNCDSGAVRLPPRPYHPPSFPPSVLDPLLHRLRSTVHPSLTRLDGASARLSPSS---FSSSLPSSISSAAEEKLRMLFVRCLAYLLSGYHDCVFYIDPASPIFNRARFLNEYVPSAEEHPFLSRLVESQSFQAFLENQEGPYVDLFRRTLDQALFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEWLEDLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSPIAIPGLGDVGRD--RLPGFRFSQSEEGGGEAGGRGGIGNRGASVRFFNQE---AGREFSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLPLLVVGGVSPRKTLHDSLFGETELDALMRKTMNLGAGSSG-----------------XXXXXXXXXXXXXXXXXXXXXXXVAE-------ADQILWREPRRWSVEEAAAMMGVTVKDVARAFGLNFDLQRVMTR---------------------------------------------XXXXXXXXXXXLSEDMARLNRSLMEAFSTEKPSKELLQEVEGGFRIKEVRLRFLAILSQPRSKKMMERHLRFGGGGGGRAGPGHLRVHLSGFEALMQLASGVCDACLLDRDYGTAHALLLLMGKYYRVVEG-------GGGREGGRVAGVGLLQGQQKEFLSSRLRHHQIYQSVELWMLVLKEQV-AAENEASTRSSSNKCN----FRLAQAPGAKAMDREPVGAASSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDTRKFVQRVKSILTEMHGVGMPDQKALAFVGRICEVHKAGFESKQVLIKLVQRIWKVSVSITPPMQPMVIPRTMTSSNASFPFNLPGEVG------------GXXXXXXXXPSRRVSFKGIGSDSDYCSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAAPPLRPHRATSPLSQLMGGIGLGGLASAGSNAPPESSTHRGPVLCLDVDAAGSVGVSGGADKLLVVYSLLQRSRITSFSGHTAPVTCVKIFRDRSNEPLVASGSLDSTLRIWKLGGGXXXXXXXXXXXXXXXXLLSSFTTAKDVRHVLTGHGNGIMCLDKSEELEVLATGARDRMVKIWNVTQGRNTATLVGHTGVVSSLRFMDESQGHRILSAGQDRNMILWDSVRGACLRVFRGHESWIRQVEAWGRDLAVTASNDRTLRLWDLRVHNCVQKMAEHKGAVTCLQVADEQDAPVLFSGSTDATVKVWDIRADGGRSMATLEGHSEAVTGLAXXXXXXXXXXXXXXXXXXXXXXXXXXKLVSVGEDKRVVEWDVWSGALLQSRMGHSDGISCVQVSRKGMIVTGSWDASVRLWEG 1432
            MAESLL+L+YPLQWQHPYLVPLPRELLVVVETPTNYILG+HT+WL DVP +SLKDVV V+CDSGAVRLPPRP++PPSFPPSVL PLL RLR TV+P LTRLD AS+R+S       S+S PS IS A+EE+LR LF+RCLAYLLSGYHDCVFYIDP SPIFNRARFL EY P AE+H FLSRL+++QSFQAFLENQ+GP ++LFRRTL QA F                                              EWLE  G                                                                         A+PG    GR   R  G +  ++E   G +  R   G +  SVRF   E    G    D                                                                  LP L VG    R +L +  FGE +LDALMRKTMNL   + G                                         AE       A  + WR+ RRWSVE AA MM VTV+DVARAFGLNFDLQRVMTR                                                        LS DMA+LNR L EAFSTEKPSKEL +EVE  FR + VR RFLAILSQPRSK+M++RH    GGG      GH RVH +GFEALMQLAS VCDAC++DRD+ TAHALL LMGKYYRV+EG                          KEFLSSRLRHHQIYQ VELWM VL+EQ+ A +   +TR  S   N    F+LA+APGAK  +R+    A +                                             D RKF+ RVKSIL EMHGVGMPD +ALAFVGRICEVH+AG ESKQ L++LVQ+IW +S + TP  Q M I +   +   S   + P                         P RRVSF+G+GS+    S                                                     XXXXXXXXXX      R HR+TSP+S LMGG+           APPE+S HRGPVL +DVDAAGSVGVSGGADKLL+VYSL QRSRITSF GHT PVTCVKIFRD +N+PLVAS S+DSTLRIWKLGGG                LLSSFTTAKDVRH+LTGH  GI+CLDK E+L++LATGA DR VK+WNV+QGRNTATL+GHT  V+SLRFMD+SQG+RILSAGQDR MILWDS RG+C+RVF+GHESWIRQVEAWGRDLAVT                        KGAVTC+QV+ EQDAPV++SGSTD+TVK+WD+R  GGR  ATLEGH+EAVTGLA                          KLVSVGEDKRVVEWD  +GALLQSRMGHSDGISCVQVS+ G+IVTGSWDASVRLWEG
Sbjct:    1 MAESLLSLIYPLQWQHPYLVPLPRELLVVVETPTNYILGVHTEWLADVPRDSLKDVVCVDCDSGAVRLPPRPFNPPSFPPSVLYPLLRRLRGTVYPMLTRLDSASSRVSLDDLPIISTSAPSEISPASEEELRRLFLRCLAYLLSGYHDCVFYIDPNSPIFNRARFLAEYAP-AEDHAFLSRLLDTQSFQAFLENQDGPSINLFRRTLFQA-FSRATSRPPSPLPGETTSSPAASTSFPSLKKCPADFRILMEEEESGNEWLETPGAGHRETHGEAWEQRPSAGRGGEECEVKLMLKIPPPPLYGETEEDESESDGSVDEDCDPATTRGEE--------AVPG----GRREFRFDGDQDQKAEGWEGVSEERDVSGRQRTSVRFNLGELENPGESKGD------------------RGDSEVMSSDRMANTITASEGLSTVVSAESHRHKEKRAKAKKARRPLNLPGLTVGSPPTRSSL-EGTFGEADLDALMRKTMNLTGATYGRNVPAASHTGGHTCGDEGDGMDSSVVPARTVDLDSGYQGGAAEAKGPTNAATGVAWRKARRWSVEAAAGMMDVTVRDVARAFGLNFDLQRVMTRGHTIFGFFDDVPPSWGREQGSKGGEGCREGRATEGSWLGKEDDGLEKDGAGAQTGVLSGDMAKLNRCLAEAFSTEKPSKELFREVEIAFRARGVRTRFLAILSQPRSKRMIQRHQFLIGGGTS----GHFRVHSTGFEALMQLASAVCDACVVDRDFPTAHALLQLMGKYYRVLEGXXXXXXXXXXXXXXXXXXXXXXXXXHKEFLSSRLRHHQIYQCVELWMHVLEEQLGAGKGPTATRRDSTNVNSVNGFKLAKAPGAKTTNRDLPSVAEA---DDPSSVGTVDVKAGGKGKGSALGQGEAAAEETPGSEMDDAEVDPRKFILRVKSILAEMHGVGMPDHRALAFVGRICEVHEAGMESKQALVRLVQKIWGISPAPTP--QQMFISQEPVNRGESVGSDAPRPAASXXXXXXXPAWTSPEGIAPMVPPRRVSFQGVGSEMGRRS-------------------------------SDSIGDSVRKNSTLLNDLRGPSXXXXXXXXXXXXXXXXRLHRSTSPISHLMGGMXXXXXXXXA--APPEASMHRGPVLSVDVDAAGSVGVSGGADKLLIVYSLQQRSRITSFWGHTGPVTCVKIFRDHANDPLVASASMDSTLRIWKLGGG----GGGDPGAFTGARLLSSFTTAKDVRHILTGHAKGIVCLDKCEDLQLLATGAMDRAVKLWNVSQGRNTATLIGHTRTVNSLRFMDQSQGYRILSAGQDRTMILWDSGRGSCIRVFKGHESWIRQVEAWGRDLAVTXXXXXXXXXXXXXXXXXXXXXXXXKGAVTCMQVSKEQDAPVVYSGSTDSTVKIWDLRGGGGRCTATLEGHAEAVTGLA---LESPMAAGIGKSKNGGGSKLVHQKLVSVGEDKRVVEWDTRTGALLQSRMGHSDGISCVQVSKYGVIVTGSWDASVRLWEG 1444          
BLAST of NO01G04250 vs. NCBI_GenBank
Match: CBN76592.1 (WD-40 repeat protein [Ectocarpus siliculosus])

HSP 1 Score: 144.8 bits (364), Expect = 2.000e-30
Identity = 130/460 (28.26%), Postives = 171/460 (37.17%), Query Frame = 0
Query: 1018 PPLRPH-RATSPLSQLMGGIGLGGLASAGSNAPP-------------ESSTHRGPVLCLDVDAAGSVGVSGGADKLLVVYSLLQRSRITSFSGHTAPVTCVKIFRDRSNEPLVASGSLDSTLRIWKLGGGXXXXXXXXXXXXXXXXLLSSFTTAKDVRHVLTGHGNGIMC-------LDKSEELEVLATGARDRMVKIWNVTQGRNTATLVGHTGVVSSLRFMDESQGHRI---LSAGQDRNMILWDSVRGACLRVFRGHESWIRQVEAWGRDLAVTASNDRTLRLWDLRVHNCVQKMAEHKGAVTCLQVADEQDAPVLFSGSTDATVKVWDIRADGGRSMATLEGHSEAVTGLAXXXXXXXXXXXXXXXXXXXXXXXXXXKLVSVGEDKRVVEWDVWSGALLQSRM------------------------GHSDGISCVQVSRKGMIVTGSWDASVRLW 1430
            PPL  H ++ S    +  G G     S G    P             E +TH GP+LCL   A  S   +G  D  L VY L   SR+   SGHT PVT V        +  V SGS DS+LR+W+                      +          VL GH   I         +D    L V  +G  D  +++W++   R      GHT  ++ L  + E     +             + ++     LR F GHE  I  +   G   AV+ SNDRTLR WD RV   V  +  H G VTC+Q     +  VL SGS D TV +WD+RA       TL GH + VTGL                            + S  ED  + EWD W    L+SR                             GISC+       ++T  WD  VR+W
Sbjct: 2345 PPLLGHAKSVSSSGSIGEGSGWAETVSGGPGELPSLLAPVELHGRDGEGATHHGPILCL--AAFESRACAGSTDGTLSVYDLSLVSRVGVLSGHTGPVTTVS-----CGDDWVLSGSSDSSLRLWQNVSDSASSTTPPRRGFISLGWQAPANAGTFKAKVLAGHQGPITAASAHPRRVDGKPWLAV--SGGEDNQIRMWDLRTRRCKVIFTGHTKAITCLTALREDSSTLVXXXXXXXXXXXXXINEASGCKALRKFSGHEGSIGTILKIGPFAAVSCSNDRTLRTWDHRVKGSVGVLRGHTGPVTCVQQM-PANRSVLASGSADGTVMMWDVRATAKGPSYTLRGHKDRVTGL----------------------LASGRSVYSCSEDASIHEWD-WDTGQLKSRFFGNRXXXXXXXXXXXXXXXXXXXXXXXXGISCLS-GTGAAVLTAGWDKVVRMW 2770          

HSP 2 Score: 82.8 bits (203), Expect = 9.600e-12
Identity = 49/114 (42.98%), Postives = 70/114 (61.40%), Query Frame = 0
Query:    2 ALLPVMAESLLALMYPLQWQHPYLVPLPRELLVVVETPTNYILGIHTDWLVDVPWESLKDVVLVNCDSGAVRLPPRPYHPPSFPPSVLDPLLHRLRSTVHPSLTRLDGASARLS 116
            ALL  +AE + ALMYPLQW + Y+  LP  L+  VE+P  +ILG+HTDWL D+  ++L+++++V+CD G V            PP V   L   +R+ +H +L  LD A ARLS
Sbjct:  633 ALLAAVAEGVFALMYPLQWPYAYVPVLPNCLIEHVESPQPFILGVHTDWLSDIAPDALEELIIVDCDLGIV----DGQGMEQLPPPVRRSLTKAVRAVLHGNLGGLD-APARLS 741          
BLAST of NO01G04250 vs. NCBI_GenBank
Match: XP_008606564.1 (hypothetical protein SDRG_02744 [Saprolegnia diclina VS20] >EQC40090.1 hypothetical protein SDRG_02744 [Saprolegnia diclina VS20])

HSP 1 Score: 126.3 bits (316), Expect = 7.500e-25
Identity = 93/306 (30.39%), Postives = 146/306 (47.71%), Query Frame = 0
Query: 1056 RGPVLCLDVDAAGSVGVSGGADKLLVVYSLLQRSRITSFSGHTAPVTCVKIFRDRSNEPLVASGSLDSTLRIWKL------GGGXXXXXXXXXXXXXXXXLLSSFTTAKDVR-HVLTGHGNGIMCLDKSEELEV----LATGARDRMVKIWNVTQGRNTATLVGHTGVVSSLRFMDESQGHRILSAGQDRNMILWDSVRGACLRVFRGHESWIRQVEAWGRDLAVTASNDRTLRLWDLRV---HNCVQKMAEHKGAVTCLQVADEQDAPVLFSGSTDATVKVWDIRADGGRSMATLEGHSEAVTGL 1348
            + PVLCL V        +G  D  + V+S    +R+    GH   +T V++  D     +V SGSLD TLR+W L                         L+++ +   + R   L GH   I  LD   +L      LA+GA D+ ++IW+ ++  ++A L  H+  ++ L+F+  S    ++S     ++ +WD+  G     F  H   +  ++  G D  V+A+NDRTL++WD+R     +C   +  H   VTC+ +    D P + SGS D TVKVWD+RA G  +   L GH+  VT L
Sbjct: 1087 QSPVLCLSVYRDRI--AAGCLDSTVAVHSAATNTRL---QGHVGALTNVQVRGD-----MVISGSLDGTLRVWDLHTSSPSSSLSRKPSLFRFLSPTTDALIATPSPFDEYRPKTLKGHTMPIAALDVGRQLGTSRYCLASGALDKSIRIWDSSKDASSAHL-SHSAPIACLKFLTGST--TLVSGDASGDVDVWDAAAGRKKAHFAAHRGGLTDLQLAG-DRLVSAANDRTLKVWDVRFRSGQSCTHVLLGHSAPVTCIALGGPAD-PTICSGSADGTVKVWDLRATGRGARLELSGHTGRVTVL 1377          
BLAST of NO01G04250 vs. NCBI_GenBank
Match: XP_008873084.1 (hypothetical protein H310_08932 [Aphanomyces invadans] >ETV98209.1 hypothetical protein H310_08932 [Aphanomyces invadans])

HSP 1 Score: 126.3 bits (316), Expect = 7.500e-25
Identity = 91/297 (30.64%), Postives = 143/297 (48.15%), Query Frame = 0
Query: 1058 PVLCLDVDAAGSVGVSGGADKLLVVYSLLQRSRITSFSGHTAPVTCVKIFRDRSNEPLVASGSLDSTLRIWKLGGGXXXXXXXXXXXXXXXXLLSSFTTAKDVRHVLTGHGNGIMCLDKSEELEV----LATGARDRMVKIWNVTQGRNTATLVGHTGVVSSLRFMDESQGHRILSAGQDRNMILWDSVRGACLRVFRGHESWIRQVEAWGRDLAVTASNDRTLRLWDLRV---HNCVQKMAEHKGAVTCLQVADEQDAPVLFSGSTDATVKVWDIRADGGRSMATLEGHSEAVTGL 1348
            P+ CL V   G    +G  +  + +Y+      +T+  GH APVT V+ FR  +    + S S D+T+R+W L                    L    T  D   VL GH   I+ L+  ++L V    LATG+ D+ ++IW+  +  +   +V H+  V+ L+F+  S G  ++S      + +WD   G     F  H   I++++  G D  V+AS+DR+L++WD+      +C   +  H G VTC+ +    D P + SGS D  VKVWD+RA G  +   L GH   +T L
Sbjct: 1137 PIACLAVH--GEHVAAGCLNGSMHLYA---HDTLTTLDGHLAPVTQVQ-FRGHA----LISTSYDATVRVWNL----HAQNSTSLSPRRSKPFLRFLATDVDTCRVLRGHTAPIVALELGKQLAVDRVLLATGSWDKCIRIWDSVKETSVMHMV-HSSAVTCLKFIATSSG--LVSGDAGAGLDVWDVHTGRKKGHFTAHRCGIKELQIAG-DRLVSASSDRSLKVWDVNFRSGQSCTHVLMGHSGPVTCVALGGPAD-PTICSGSADGVVKVWDLRATGKGARLELSGHGGRITTL 1414          
BLAST of NO01G04250 vs. NCBI_GenBank
Match: XP_009842340.1 (hypothetical protein H257_15811 [Aphanomyces astaci] >ETV68041.1 hypothetical protein H257_15811 [Aphanomyces astaci])

HSP 1 Score: 125.6 bits (314), Expect = 1.300e-24
Identity = 93/314 (29.62%), Postives = 147/314 (46.82%), Query Frame = 0
Query: 1042 ASAGSNAPPESSTHRGPVLCLDVDAAGSVGVSGGADKLLVVYSLLQRSRITSFSGHTAPVTCVKIFRDRSNEPLVASGSLDSTLRIWKLGGGXXXXXXXXXXXXXXXXLLSSFTTAKDVRHVLTGHGNGIMCLDKSEELEV----LATGARDRMVKIWNVTQGRNTATLVGHTGVVSSLRFMDESQGHRILSAGQDRNMILWDSVRGACLR-VFRGHESWIRQVEAWGRDLAVTASNDRTLRLWDLRV---HNCVQKMAEHKGAVTCLQVADEQDAPVLFSGSTDATVKVWDIRADGGRSMATLEGHSEAVTGL 1348
            AS+ S+A         P+ CL V   G   V+G  D  + +Y+    +      GH AP+T V++         V S S D+T+R+W L                      + T  +    VL GH + ++ L+  ++L V    LATG+ D+ ++IW+ T+  +   L  H   ++ L+F+  S    ++S      + +WD V G   +  F  H S I +++  G D  V+ASNDR+L++WD+      +C   +  H G VTC+ +    D P + SGS D  VKVWD+RA G  +   L GH   +T L
Sbjct: 1146 ASSSSDAANALIATSSPISCLAVQ--GQHVVAGCIDGSMHLYA--SDAVTHHLDGHGAPITHVQV-----RGHAVVSTSYDATVRVWNL---HAYGTSPRSRPKPPFLRFLAATDTESACRVLRGHTSPVVALELGKQLAVDRVLLATGSWDKSIRIWDSTKEASVLHL-AHASAITCLKFLATSS--VLVSGDAGAGLDVWDVVHGGRKKGHFTAHRSGITELQVAG-DRLVSASNDRSLKVWDVHFRSGQSCTHVLMGHSGPVTCVALGGPAD-PTICSGSADGVVKVWDLRASGKGARLELTGHGGRITTL 1442          

HSP 2 Score: 58.5 bits (140), Expect = 1.900e-4
Identity = 41/127 (32.28%), Postives = 68/127 (53.54%), Query Frame = 0
Query:    1 MALLPVMAESLLALMYPLQWQHPYLVPLPRELLVVVETPTNYILGIHTDWLVDVPWESLKD-VVLVNCDSGAVRLPPRPY---HPPSFPPSVLDPLLHRLRSTVHPSLTRLDGASARLSPSSFSSSL 124
            ++LL  + E+L ALMYP +WQHPY+  LPR L   ++ P  YILG+H+ WL  +      D +VLV+ D G +      +    PP  P  +   L  RL+     + + +   + RLS +++ +++
Sbjct:  531 LSLLCPVTETLKALMYPFRWQHPYVPMLPRILSEYLQAPLPYILGVHSSWLPSLFEGGRPDHLVLVDADRGTITSSFTTHSDTQPPVLPLGLTRDLYTRLKRFKAEAWSPVVEHNIRLSVATYITTM 657          
BLAST of NO01G04250 vs. NCBI_GenBank
Match: OQS00519.1 (hypothetical protein ACHHYP_03448 [Achlya hypogyna])

HSP 1 Score: 117.5 bits (293), Expect = 3.500e-22
Identity = 79/217 (36.41%), Postives = 117/217 (53.92%), Query Frame = 0
Query:    1 MALLPVMAESLLALMYPLQWQHPYLVPLPRELLVVVETPTNYILGIHTDWLVDVPWESLKD-VVLVNCDSGAVRLPPRPYHPPSFPPSVLDPLLHRLRSTVHPSLTRLDGASARLSPSSFSSSLPSSISSAAEEKLRMLFVRCLAYLLSGYHDCVFYIDPASPIFNRARFLNEYVPSAEEHPFLSRLVESQSFQAFLENQEGPYVDLFR---RTLDQ 214
            ++LL  + ESL AL+YP +WQHPY+  LPR L   ++ P  YILG+ T WL  +      D +VLV+ D G + +      PP  P ++   L  RL++ +          + R SP               E ++R+ FV  L  ++ GY DC+F++D   P+FN+ RFL   V S E  PF++RLV +Q+F+AFLEN  G  +D+F    +TL Q
Sbjct:  478 LSLLCPVTESLKALLYPFRWQHPYVPMLPRILSEYLQAPLPYILGVQTAWLPGLFEGGRPDNLVLVDIDRGTLNIGNEAALPP-LPTALTKALYARLKAML----------AERWSPD-------------LEHRIRLSFVCYLTAIIRGYRDCLFFVDSGFPVFNKRRFLATTV-SPERTPFVTRLVGTQAFEAFLENHHGSRLDVFHAIYQTLSQ 669          
BLAST of NO01G04250 vs. NCBI_GenBank
Match: CCA15028.1 (conserved hypothetical protein [Albugo laibachii Nc14] >CCA23167.1 conserved hypothetical protein [Albugo laibachii Nc14])

HSP 1 Score: 114.0 bits (284), Expect = 3.900e-21
Identity = 84/221 (38.01%), Postives = 121/221 (54.75%), Query Frame = 0
Query:    1 MALLPVMAESLLALMYPLQWQHPYLVPLPRELLVVVETPTNYILGIHTDWL-VDVPWESLKDVVLVNCDSGAVRLPPRPYHPPSFPPSVLDPLLHRLRSTVHPSLTRLDGASARLSPSSFS-SSLP------------SSISSAAEEKLRMLFVRCLAYLLSGYHDCVFYIDPASPIFNRARFLNEYVPSAEEHPFLSRLVESQSFQAFLENQEGPYVDLF 208
            MA+L  +AE+L  L+YP +WQHPY+  LPR LL  ++ P  YILG+H+ WL + +     + +VLV+CD G V  P       + P  VL PL    R  +   L R+     +  P +F   SLP             + S   E+++R+ FV   A +L+GY DC+FY++   P+FN+ RFL   V   +  PF+SRL+ +QSFQAFLEN     +D F
Sbjct:  628 MAVLCPVAEALCTLLYPFRWQHPYVPVLPRYLLDYLQAPLPYILGLHSSWLPLMMDASRPEHLVLVDCDRGCVSSPDNETSSYTDPLRVL-PLETTRR--LKARLARI--LMVKTEPYAFGLESLPVVAVELKEGTKTCAWSDQIEQRIRLEFVLFHATVLTGYRDCLFYVNHKLPVFNKHRFLTTCV-DFKVLPFVSRLMCTQSFQAFLENHNSAEMDTF 842          
BLAST of NO01G04250 vs. NCBI_GenBank
Match: CCI41734.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 113.6 bits (283), Expect = 5.100e-21
Identity = 76/216 (35.19%), Postives = 117/216 (54.17%), Query Frame = 0
Query:    1 MALLPVMAESLLALMYPLQWQHPYLVPLPRELLVVVETPTNYILGIHTDWLVDVPWESLKD-VVLVNCDSGAVRLPPR-----PYHPPSFPPSVLDPLLHRLRSTVHPSLTRLDGASA--RLSPSSFSSSLPS-SISSAAEEKLRMLFVRCLAYLLSGYHDCVFYIDPASPIFNRARFLNEYVPSAEEHPFLSRLVESQSFQAFLENQEGPYVDLF 208
            MA+L  +AE++  L+YP +WQHPY+  LPR LL  ++ P  YILG+H+ WL      SL + +VLV+CD G V +P             F   +   L  +L + +   LT    A A     PS+   +  + + S   E+++R+ FV   A +  GY DC+F+++   P+FN+ RF+   +  +E   F+SRL+ +QSFQ FLEN     +D F
Sbjct:  601 MAVLCPVAEAICTLLYPFRWQHPYVPVLPRYLLDYLQAPLPYILGLHSSWLPMSMETSLPEHLVLVDCDCGCVTIPENESSCYTTQRSDFHRLLPSKLTRQLTTRLASILTVNSDAPAGFHADPSNAQEATETYAWSDQIEQRIRLEFVIFHATVFMGYRDCLFFVNHKLPVFNKHRFVTSCLIDSEVFAFVSRLLCTQSFQTFLENHNSAEMDTF 816          
BLAST of NO01G04250 vs. NCBI_GenBank
Match: ETI48177.1 (hypothetical protein F443_07733 [Phytophthora parasitica P1569] >ETI48178.1 hypothetical protein, variant 1 [Phytophthora parasitica P1569] >ETL94634.1 hypothetical protein, variant 1 [Phytophthora parasitica] >ETL94635.1 hypothetical protein, variant 2 [Phytophthora parasitica])

HSP 1 Score: 112.8 bits (281), Expect = 8.600e-21
Identity = 70/210 (33.33%), Postives = 117/210 (55.71%), Query Frame = 0
Query:    2 ALLPVMAESLLALMYPLQWQHPYLVPLPRELLVVVETPTNYILGIHTDWLVDVPWESLKD-VVLVNCDSGAVRLPPRPYHPPSFPPSVLDPLLHRLRSTVHPSL-TRLDGASARLSPSSFSSSLPSSISSAAE--EKLRMLFVRCLAYLLSGYHDCVFYIDPASPIFNRARFLNEYVPSAEEHPFLSRLVESQSFQAFLENQEGPYVDLF 208
            +LL  +AE L AL+YP +WQHPY+  LPR L   ++ P  YILGIHT+WL  +      + +V+V+ D G ++L  +    P  P  +   L HRL++ +HPSL   ++  +  +     +      +    +  +++RM FV  L+ L+ GY +C+F+++   P+FN+ RF       +E  P ++RL  +Q+FQAFLE+     + +F
Sbjct:  534 SLLCPVAEGLCALIYPFRWQHPYVPILPRVLSEYLQAPLPYILGIHTNWLQSLLENGRPEHLVVVDIDRGTIQL--QESGGPVLPHKLTTALHHRLKTILHPSLFGEMESNTDDVPKQDVNKERRDIVEWGPDTGKQVRMEFVCFLSTLVRGYRECLFFVNQKLPVFNKRRFFESEAIDSEVTPLVTRLFCTQAFQAFLESHSSAELSVF 741          
BLAST of NO01G04250 vs. NCBI_GenBank
Match: ETI48179.1 (hypothetical protein, variant 2 [Phytophthora parasitica P1569] >ETL94637.1 hypothetical protein, variant 4 [Phytophthora parasitica])

HSP 1 Score: 112.8 bits (281), Expect = 8.600e-21
Identity = 70/210 (33.33%), Postives = 117/210 (55.71%), Query Frame = 0
Query:    2 ALLPVMAESLLALMYPLQWQHPYLVPLPRELLVVVETPTNYILGIHTDWLVDVPWESLKD-VVLVNCDSGAVRLPPRPYHPPSFPPSVLDPLLHRLRSTVHPSL-TRLDGASARLSPSSFSSSLPSSISSAAE--EKLRMLFVRCLAYLLSGYHDCVFYIDPASPIFNRARFLNEYVPSAEEHPFLSRLVESQSFQAFLENQEGPYVDLF 208
            +LL  +AE L AL+YP +WQHPY+  LPR L   ++ P  YILGIHT+WL  +      + +V+V+ D G ++L  +    P  P  +   L HRL++ +HPSL   ++  +  +     +      +    +  +++RM FV  L+ L+ GY +C+F+++   P+FN+ RF       +E  P ++RL  +Q+FQAFLE+     + +F
Sbjct:  412 SLLCPVAEGLCALIYPFRWQHPYVPILPRVLSEYLQAPLPYILGIHTNWLQSLLENGRPEHLVVVDIDRGTIQL--QESGGPVLPHKLTTALHHRLKTILHPSLFGEMESNTDDVPKQDVNKERRDIVEWGPDTGKQVRMEFVCFLSTLVRGYRECLFFVNQKLPVFNKRRFFESEAIDSEVTPLVTRLFCTQAFQAFLESHSSAELSVF 619          
The following BLAST results are available for this feature:
BLAST of NO01G04250 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM29362.10.000e+046.79ribosome assembly protein 4 [Nannochloropsis gadit... [more]
CBN76592.12.000e-3028.26WD-40 repeat protein [Ectocarpus siliculosus][more]
XP_008606564.17.500e-2530.39hypothetical protein SDRG_02744 [Saprolegnia dicli... [more]
XP_008873084.17.500e-2530.64hypothetical protein H310_08932 [Aphanomyces invad... [more]
XP_009842340.11.300e-2429.62hypothetical protein H257_15811 [Aphanomyces astac... [more]
OQS00519.13.500e-2236.41hypothetical protein ACHHYP_03448 [Achlya hypogyna... [more]
CCA15028.13.900e-2138.01conserved hypothetical protein [Albugo laibachii N... [more]
CCI41734.15.100e-2135.19unnamed protein product [Albugo candida][more]
ETI48177.18.600e-2133.33hypothetical protein F443_07733 [Phytophthora para... [more]
ETI48179.18.600e-2133.33hypothetical protein, variant 2 [Phytophthora para... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL005nonsL005Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR047ncniR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR091ngnoR091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR087ngnoR087Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G04250.1NO01G04250.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|577335gene_441Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100028g46gene1279Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G04250.1NO01G04250.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G04250 ID=NO01G04250|Name=NO01G04250|organism=Nannochloropsis oceanica|type=gene|length=4834bp
ATGGCTCTCCTCCCCGTCATGGCAGAGTCACTGCTCGCACTCATGTACCC
ACTCCAATGGCAACACCCCTACCTCGTTCCCCTCCCTCGCGAGCTTCTCG
TGGTGGTCGAGACACCCACCAACTACATCCTAGGAATCCACACTGACTGG
CTCGTCGATGTACCCTGGGAGTCCCTCAAAGATGTCGTCTTGGTTAATTG
TGACTCAGGTGCCGTCCGCCTTCCCCCTCGCCCCTACCACCCGCCCTCCT
TCCCTCCATCCGTCCTGGACCCCCTCCTTCACCGATTAAGGAGCACCGTC
CATCCCTCCCTCACCCGTCTCGACGGCGCCTCGGCACGTCTCTCACCTTC
CTCCTTCTCGTCCTCCCTCCCTTCCTCCATCTCCTCCGCAGCGGAAGAAA
AATTGCGGATGTTGTTTGTGCGGTGTTTGGCGTACCTGTTGTCCGGGTAT
CATGATTGTGTGTTTTATATCGACCCCGCTTCTCCCATATTCAATCGAGC
TAGGTTTTTGAATGAATACGTGCCTTCTGCAGAGGAACATCCCTTCCTCT
CCCGGCTTGTGGAGTCGCAATCCTTTCAAGCTTTCCTCGAAAATCAGGAG
GGCCCATACGTGGACCTGTTTCGTCGTACCCTCGACCAAGCCCTCTTTCG
CGCCACTTCCCGCCCTCCCTCCCCCATGCCTGGCCAGTCCCCCGCAGCAG
CAGCAGCAGCGTCAGCAGCTGCTGAATCTATCAGTAAATGCCCGGCGGAC
TTTCAGATATCGATGGAGGAGGAAGACAGTGAGACTGAGTGGCTGGAGGA
CCTTGGGGGGGGCGACGGAGGGATGACGGGAGGGGGAGAGGGACAAGGGG
GGgtgatgggttttggggagggggaagaagtgacggaggaggatgtgatg
tgaagctcatgttgactattccaccgccaaagGTGGAAGACGGGGAGGAA
GAGGAAGAGGAGGAGGAGGAACACGAGCAGCAGGGGGAGGAAGAACAGGA
GGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGG
AGGAGGAGGAGGTGGAAGAAGATGGAGAGATGGGGGAGGAAAGCTCTAGC
CCGATTGCTATTCCGGGGCTGGGGGACGTTGGGAGGGATCGCCTTCCGGG
CTTCCGCTTCAGTCAATCAGAGGAGGGAGGGGGAGAGGCAGGGGGCAGAG
GAGGGATAGGAAATCGTGGGGCGAGCGTGCGTTTTTTCAATCAAGAGGCG
GGCCGTGAGTTTTCGGATGAAGATGAGACAGCAGCAGCAGCAACAACAGC
AACAAAAACAAAAACAACAACAACAACAACAATAACAACAATAACAACGG
CTCCCGCACTCGATAAATTGAAAGAGAAGAGCAAGAAGCCAAGGAAGAGG
GTGGGGAAGGAAGGAGAGGGGGACGGAGGAAAAAAAAGAGAAAAGAAAGC
GCGAAAGCAGCTGACATTGCCACTCTTGGTTGTGGGCGGTGTTTCTCCAA
GGAAGACGCTTCATGACTCCTTATTCGGCGAAACCGAATTGGATGCCCTG
ATGAGGAAGACCATGAATCTCGGTGCTGGTAGCAGCGGCAACAGCAACAG
CAGTGGCGGCGAGCAAGTCTTCTCTCCTCCTGAAACAGCAGCAGCAGCTG
CAGTAGCAGTAGCAGAGGCGGATCAAATTTTGTGGCGGGAACCACGGAGG
TGGAGCGTGGAAGAGGCAGCAGCGATGATGGGTGTGACTGTCAAGGACGT
GGCTAGGGCGTTCGGGCTGAATTTTGACTTGCAGAGGGTTATGACGAGGG
gtcatacaatcttcgggtttttttatgacgaggccataccccccctgctg
ctgcatcgtctttggagagaatgggagagggagggagggattcgcctttg
gtcggtgcagGGGGGAGGGAGGGAGGGAGGGAGGGAGGGGCGTTGTCGGA
GGATATGGCGAGGTTGAATCGGTCTTTGATGGAGGCATTTTCGACGGAGA
AGCCTAGTAAAGAGCTGCTGCAGGAGGTGGAAGGGGGGTTTAGGATTAAG
GAGGTCCGACTAAGATTTCTGGCCATTTTGTCACAGCCCAGGAGTAAAAA
AATGATGGAGAGGCACCTGAGGTTTGGAGGAGGAGGGGGAGGGAGGGCTG
GGCCGGGACATCTCAGGGTGCACTTGTCGGGCTTTGAGGCGTTAATGCAG
CTGGCGAGTGGTGTGTGTGATGCGTGTTTATTGGACAGGGACTACGGAAC
CGCTCATGCGTTGTTGTTGTTGATGGGAAAATATTACAGAGTTGTGGAGG
GAGGGGGAGGGAGGGAAGGAGGGAGGGTAGCGGGCGTAGGACTGCTGCAG
GGGCAGCAGAAGGAATTCTTGAGTAGCCGTTTAAGGCATCATCAGATTTA
CCAGAGCGTTGAGTTATGGATGTTGGTATTGAAGGAGCAGGTGGCGGCGG
AGAATGAGGCGAGCACCCGTAGCAGCAGCAACAAATGTAATTTCAGGCTT
GCCCAAGCGCCGGGTGCCAAGGCCATGGACCGTGAACCCGTGGGTGCTGC
TTCCTCCCCCTCGTCCTCGCCCTCTTCCTCACCCTGCTTGGCCGATGAGG
CAACTGGAAGTGGATCATCAGAAAACGACGCAGCAGCAACAGGAGCGACG
GCAGCAGCAGCAGTAGCAACAGCAGCAGCAACAGCGGAAGTAGACACGCG
CAAGTTTGTCCAACGGGTTAAGTCCATTTTGACGGAAATGCATGGGGTGG
GAATGCCGGATCAGAAGGCTCTTGCCTTTGTGGGAAGGATCTGTGAGGTG
CACAAGGCGGGGTTTGAGAGCAAGCAAGTTCTTATCAAATTAGTCCAGCG
AATTTGGAAGGTGAGTGTGAGTATCACCCCGCCGATGCAGCCGATGGTAA
TTCCACGGACGATGACCTCGTCGAATGCATCCTTTCCGTTTAATCTACCG
GGAGAAGTAGGCGGAGGAGGGGGAGAAAGGGGAGGGGGACCTTCGAGGAG
GGTATCTTTTAAAGGGATAGGTTCGGATAGTGATTACTGTAGTCATAGCA
GTGGTAACAACAACGGCAGCAGCAGCTGCAGCATTAACTACGCCCATCAC
AACATCAATGACTTTCCCGGTCCCATACCCAGCCCTTCCTTCGCCTCCTC
CTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCT
CCTCCTCCTCCTCCTCTTTTTCCTCCTCGCGGGGGGCCGCTCCTCCTCTT
CGTCCTCACCGCGCTACTAGTCCGTTGTCGCAGCTTATGGGAGGAATAGG
GCTAGGCGGGTTGGCCAGTGCAGGGAGCAATGCTCCTCCGGAGAGCTCTA
CGCATCGAGGGCCTGTGTTATGTCTGGATGTCGATGCGGCGGGAAGTGTG
GGTGTGTCGGGGGGTGCGGATAAGCTGCTGGTGGTATACAGCTTGTTGCA
ACGCTCCAGGATTACAAGTTTTTCGGGGCACACGGCGCCAGTGACATGTG
TGAAGATTTTTAGGGACCGCTCCAATGAACCTTTGGTGGCTTCGGGATCT
CTGGACTCGACGTTACGGATATGGAAACTGGGTGGAGGTGGTGGGGAAGG
AGGAGGAGGCGAGTTTGGTGGGACGGGAGCGACGGGATTGTTATCGAGCT
TCACGACTGCGAAGGACGTGAGGCATGTGCTGACGGGGCATGGGAATGGA
ATCATGTGCCTGGATAAGAGCGAGGAATTGGAGGTGTTGGCAACGGGCGC
GAGGGACCGAATGGTGAAGATTTGGAATGTCACGCAAGGGAGGAACACGG
CCACGCTGGTAGGGCACACAGGGGTCGTGTCCAGCTTGCGTTTCATGGAC
GAAAGCCAGGGCCACCGTATCTTGAGTGCGGGCCAGGATCGGAACATGAT
TCTGTGGGACTCGGTCCGTGGGGCGTGTTTGAGGGTATTCCGGGGGCATG
AAAGCTGGATTCGGCAGGTGGAGGCTTGGGGTAGGGATTTGGCCGTTACC
GCGAGCAACGACCGAACGTTGCGACTGTGGGATTTACGGGTTCATAATTG
TGTGCAGAAAATGGCGGAGCACAAGGGAGCGGTGACGTGTTTGCAGGTAG
CGGATGAGCAGGACGCCCCTGTTTTGTTTAGCGGTTCGACAGACGCTACG
GTCAAGGTGTGGGACATAAGGGCGGATGGAGGGAGGTCTATGGCCACGTT
GGAAGGGCACTCGGAGGCAGTGACGGGCTTGGCGCTCCAGCAGCAGCAGC
AGCAGCAGCAGGCACCGTTGTCGAAAAGTAAGAATGGTGGAGACGGAGGA
GGGGGGGCGAGGAAATTAGTGTCGGTGGGGGAGGATAAGAGGGTGGTGGA
GTGGGACGTGTGGTCAGGCGCCTTGTTGCAGTCTAGAATGGGGCATTCGG
ACGGGATAAGCTGTGTGCAAGTGAGTAGGAAAGGGATGATTGTCACGGGG
AGTTGGGACGCGTCGGTGCGTCTCTGGGAAGGCACGTCGATGCCGACTTC
AGGGAGGGAGGGAGGGAGGAAGTAAGGGAGGGGAGGAGTAGAGAAAGGAG
ATTGAAAGTGGATGGTAGGGTGGATCAAATGACATTCTTGTGTGAAGGAG
TGGGAGATGCACATAGAAGTAGGTGAGTTTGTATATCAACTGTAGGGGGC
GATTAATGAAGAGACAAATTAGAGCACCAAAAAGAGGAGGAGTGAGCACA
CTCAGGAGTAGTAGTAGCAGCAGCAGCAGTAGCAGCAGCGGCAACACAGA
CATATGAAGATGTACGACATTGGTAAGACACTCACAGAAATGTTGAGGGC
GAGTCAAGGTAACACGAAATTGAGCAATGTGGAA
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protein sequence of NO01G04250.1

>NO01G04250.1-protein ID=NO01G04250.1-protein|Name=NO01G04250.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1445bp
MALLPVMAESLLALMYPLQWQHPYLVPLPRELLVVVETPTNYILGIHTDW
LVDVPWESLKDVVLVNCDSGAVRLPPRPYHPPSFPPSVLDPLLHRLRSTV
HPSLTRLDGASARLSPSSFSSSLPSSISSAAEEKLRMLFVRCLAYLLSGY
HDCVFYIDPASPIFNRARFLNEYVPSAEEHPFLSRLVESQSFQAFLENQE
GPYVDLFRRTLDQALFRATSRPPSPMPGQSPAAAAAASAAAESISKCPAD
FQISMEEEDSETEWLEDLGGGDGGMTGGGEGQGGVEDGEEEEEEEEEHEQ
QGEEEQEEEEEEEEEEEEEEEEEEEEEVEEDGEMGEESSSPIAIPGLGDV
GRDRLPGFRFSQSEEGGGEAGGRGGIGNRGASVRFFNQEAGREFSDEDET
AAAATTATKTKTTTTTTITTITTAPALDKLKEKSKKPRKRVGKEGEGDGG
KKREKKARKQLTLPLLVVGGVSPRKTLHDSLFGETELDALMRKTMNLGAG
SSGNSNSSGGEQVFSPPETAAAAAVAVAEADQILWREPRRWSVEEAAAMM
GVTVKDVARAFGLNFDLQRVMTRGGREGGREGGALSEDMARLNRSLMEAF
STEKPSKELLQEVEGGFRIKEVRLRFLAILSQPRSKKMMERHLRFGGGGG
GRAGPGHLRVHLSGFEALMQLASGVCDACLLDRDYGTAHALLLLMGKYYR
VVEGGGGREGGRVAGVGLLQGQQKEFLSSRLRHHQIYQSVELWMLVLKEQ
VAAENEASTRSSSNKCNFRLAQAPGAKAMDREPVGAASSPSSSPSSSPCL
ADEATGSGSSENDAAATGATAAAAVATAAATAEVDTRKFVQRVKSILTEM
HGVGMPDQKALAFVGRICEVHKAGFESKQVLIKLVQRIWKVSVSITPPMQ
PMVIPRTMTSSNASFPFNLPGEVGGGGGERGGGPSRRVSFKGIGSDSDYC
SHSSGNNNGSSSCSINYAHHNINDFPGPIPSPSFASSSSSSSSSSSSSSS
SSSSSSSSSFSSSRGAAPPLRPHRATSPLSQLMGGIGLGGLASAGSNAPP
ESSTHRGPVLCLDVDAAGSVGVSGGADKLLVVYSLLQRSRITSFSGHTAP
VTCVKIFRDRSNEPLVASGSLDSTLRIWKLGGGGGEGGGGEFGGTGATGL
LSSFTTAKDVRHVLTGHGNGIMCLDKSEELEVLATGARDRMVKIWNVTQG
RNTATLVGHTGVVSSLRFMDESQGHRILSAGQDRNMILWDSVRGACLRVF
RGHESWIRQVEAWGRDLAVTASNDRTLRLWDLRVHNCVQKMAEHKGAVTC
LQVADEQDAPVLFSGSTDATVKVWDIRADGGRSMATLEGHSEAVTGLALQ
QQQQQQQAPLSKSKNGGDGGGGARKLVSVGEDKRVVEWDVWSGALLQSRM
GHSDGISCVQVSRKGMIVTGSWDASVRLWEGTSMPTSGREGGRK*
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Synonyms
Publications